Tbg972.9.7210 | DNA-repair protein, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.9.7210OTHER0.9994260.0000100.000565
No Results

  • Fasta :-

    >Tbg972.9.7210 MGQQKKDAAQSVAAVAAQNVDSYLRGVTSRARVPSATGGRGTRRRLASQAEVAAAKIKEQ PKSLDDFADADNGDDEWEEVMLPTSFTPSSSTKPEVKVKDEKNGIVETPEFGATGPNPGQ GGVKAELVDLTDEENRHNRILASVTPMGGQQSSSPSSGQWRQRDPAYEQMLEQQQLLAAK RRSERTKRAVEEISTLLFALLRGRKIVQQARHPKLVRGLLRLYVVEDATSKTYPLLRAVL QAKGLYAKAMNPAVSTPSLAPCWVTANKDSVNNYTSASISALLRGIECVFVLDGGIEHAA LSNWAAPIQPGYLFEQLRKYRYSIGSPGCRIVLPHSLYICAVFLSLAAVSNVSCRLVVAV ERMRRGDMSEKSGSDGGSPPKEAMSLFGSGKKRKRGDDAGAKQNTPKRLPSSCFWLEVWC PQRQSYISVNPCGGCATLFAAPYTFSVGGDAIMDVTPRYSIKYSSAFTHRLGRCDRYRHI WKDLQWNDNREASEVIVDLFRRDVGKYTEAQMQREKKQLHSLTYAEEVPKTLTALQKHPL FILENGLSRYEGIYPKDSTTMVGSVKGHIVFKRSAVVSLRSRDGWLREGRTVSGEEEPYK VIPPPPSRPFSKSSALFGVWQTKPFAPEPLGEDGSIPKHGNTQWYILLDKPAPIGLVHMQ QPNIIRVARRMNIDFGIVVTGYRRRRLNEARSSGWEVVTDGIIVKETNTGSLVKAYEEWK QLTEEQEAAKRKQRAYRWWMHFVQHRLAYLRIRQQYLEGATHGHLSSH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/502 Sequence name : 502 Sequence length : 768 VALUES OF COMPUTED PARAMETERS Coef20 : 3.759 CoefTot : -0.112 ChDiff : 29 ZoneTo : 50 KR : 9 DE : 2 CleavSite : 54 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.694 1.988 0.382 0.691 MesoH : -0.062 0.679 -0.157 0.302 MuHd_075 : 37.325 20.435 9.100 8.123 MuHd_095 : 32.702 25.065 9.062 7.729 MuHd_100 : 34.450 22.437 7.817 7.917 MuHd_105 : 32.238 24.523 7.969 8.322 Hmax_075 : 12.133 9.333 1.872 3.733 Hmax_095 : 8.000 21.800 2.777 5.600 Hmax_100 : 9.200 16.900 2.934 5.420 Hmax_105 : 7.800 14.350 0.345 4.247 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3990 0.6010 DFMC : 0.6083 0.3917
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 768 Tbg972.9.7210 MGQQKKDAAQSVAAVAAQNVDSYLRGVTSRARVPSATGGRGTRRRLASQAEVAAAKIKEQPKSLDDFADADNGDDEWEEV 80 MLPTSFTPSSSTKPEVKVKDEKNGIVETPEFGATGPNPGQGGVKAELVDLTDEENRHNRILASVTPMGGQQSSSPSSGQW 160 RQRDPAYEQMLEQQQLLAAKRRSERTKRAVEEISTLLFALLRGRKIVQQARHPKLVRGLLRLYVVEDATSKTYPLLRAVL 240 QAKGLYAKAMNPAVSTPSLAPCWVTANKDSVNNYTSASISALLRGIECVFVLDGGIEHAALSNWAAPIQPGYLFEQLRKY 320 RYSIGSPGCRIVLPHSLYICAVFLSLAAVSNVSCRLVVAVERMRRGDMSEKSGSDGGSPPKEAMSLFGSGKKRKRGDDAG 400 AKQNTPKRLPSSCFWLEVWCPQRQSYISVNPCGGCATLFAAPYTFSVGGDAIMDVTPRYSIKYSSAFTHRLGRCDRYRHI 480 WKDLQWNDNREASEVIVDLFRRDVGKYTEAQMQREKKQLHSLTYAEEVPKTLTALQKHPLFILENGLSRYEGIYPKDSTT 560 MVGSVKGHIVFKRSAVVSLRSRDGWLREGRTVSGEEEPYKVIPPPPSRPFSKSSALFGVWQTKPFAPEPLGEDGSIPKHG 640 NTQWYILLDKPAPIGLVHMQQPNIIRVARRMNIDFGIVVTGYRRRRLNEARSSGWEVVTDGIIVKETNTGSLVKAYEEWK 720 QLTEEQEAAKRKQRAYRWWMHFVQHRLAYLRIRQQYLEGATHGHLSSH 800 ................................................................................ 80 ................................................................................ 160 ...........................P.................................................... 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............P................................................................... 640 ................................................................................ 720 ................................................ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ Tbg972.9.7210 5 --MGQQK|KD 0.061 . Tbg972.9.7210 6 -MGQQKK|DA 0.208 . Tbg972.9.7210 25 NVDSYLR|GV 0.082 . Tbg972.9.7210 30 LRGVTSR|AR 0.106 . Tbg972.9.7210 32 GVTSRAR|VP 0.080 . Tbg972.9.7210 40 PSATGGR|GT 0.100 . Tbg972.9.7210 43 TGGRGTR|RR 0.177 . Tbg972.9.7210 44 GGRGTRR|RL 0.125 . Tbg972.9.7210 45 GRGTRRR|LA 0.412 . Tbg972.9.7210 56 AEVAAAK|IK 0.062 . Tbg972.9.7210 58 VAAAKIK|EQ 0.073 . Tbg972.9.7210 62 KIKEQPK|SL 0.098 . Tbg972.9.7210 93 TPSSSTK|PE 0.081 . Tbg972.9.7210 97 STKPEVK|VK 0.064 . Tbg972.9.7210 99 KPEVKVK|DE 0.084 . Tbg972.9.7210 102 VKVKDEK|NG 0.062 . Tbg972.9.7210 124 PGQGGVK|AE 0.060 . Tbg972.9.7210 136 LTDEENR|HN 0.074 . Tbg972.9.7210 139 EENRHNR|IL 0.341 . Tbg972.9.7210 161 PSSGQWR|QR 0.154 . Tbg972.9.7210 163 SGQWRQR|DP 0.129 . Tbg972.9.7210 180 QQLLAAK|RR 0.057 . Tbg972.9.7210 181 QLLAAKR|RS 0.134 . Tbg972.9.7210 182 LLAAKRR|SE 0.342 . Tbg972.9.7210 185 AKRRSER|TK 0.384 . Tbg972.9.7210 187 RRSERTK|RA 0.105 . Tbg972.9.7210 188 RSERTKR|AV 0.790 *ProP* Tbg972.9.7210 202 LLFALLR|GR 0.082 . Tbg972.9.7210 204 FALLRGR|KI 0.082 . Tbg972.9.7210 205 ALLRGRK|IV 0.254 . Tbg972.9.7210 211 KIVQQAR|HP 0.085 . Tbg972.9.7210 214 QQARHPK|LV 0.244 . Tbg972.9.7210 217 RHPKLVR|GL 0.078 . Tbg972.9.7210 221 LVRGLLR|LY 0.086 . Tbg972.9.7210 231 VEDATSK|TY 0.052 . Tbg972.9.7210 237 KTYPLLR|AV 0.117 . Tbg972.9.7210 243 RAVLQAK|GL 0.079 . Tbg972.9.7210 248 AKGLYAK|AM 0.072 . Tbg972.9.7210 268 CWVTANK|DS 0.063 . Tbg972.9.7210 284 SISALLR|GI 0.135 . Tbg972.9.7210 318 YLFEQLR|KY 0.092 . Tbg972.9.7210 319 LFEQLRK|YR 0.074 . Tbg972.9.7210 321 EQLRKYR|YS 0.288 . Tbg972.9.7210 330 IGSPGCR|IV 0.101 . Tbg972.9.7210 355 VSNVSCR|LV 0.223 . Tbg972.9.7210 362 LVVAVER|MR 0.075 . Tbg972.9.7210 364 VAVERMR|RG 0.082 . Tbg972.9.7210 365 AVERMRR|GD 0.338 . Tbg972.9.7210 371 RGDMSEK|SG 0.089 . Tbg972.9.7210 381 DGGSPPK|EA 0.068 . Tbg972.9.7210 391 SLFGSGK|KR 0.065 . Tbg972.9.7210 392 LFGSGKK|RK 0.071 . Tbg972.9.7210 393 FGSGKKR|KR 0.241 . Tbg972.9.7210 394 GSGKKRK|RG 0.118 . Tbg972.9.7210 395 SGKKRKR|GD 0.352 . Tbg972.9.7210 402 GDDAGAK|QN 0.062 . Tbg972.9.7210 407 AKQNTPK|RL 0.069 . Tbg972.9.7210 408 KQNTPKR|LP 0.181 . Tbg972.9.7210 423 EVWCPQR|QS 0.080 . Tbg972.9.7210 458 IMDVTPR|YS 0.097 . Tbg972.9.7210 462 TPRYSIK|YS 0.103 . Tbg972.9.7210 470 SSAFTHR|LG 0.086 . Tbg972.9.7210 473 FTHRLGR|CD 0.180 . Tbg972.9.7210 476 RLGRCDR|YR 0.238 . Tbg972.9.7210 478 GRCDRYR|HI 0.151 . Tbg972.9.7210 482 RYRHIWK|DL 0.078 . Tbg972.9.7210 490 LQWNDNR|EA 0.117 . Tbg972.9.7210 501 VIVDLFR|RD 0.066 . Tbg972.9.7210 502 IVDLFRR|DV 0.420 . Tbg972.9.7210 506 FRRDVGK|YT 0.115 . Tbg972.9.7210 514 TEAQMQR|EK 0.091 . Tbg972.9.7210 516 AQMQREK|KQ 0.059 . Tbg972.9.7210 517 QMQREKK|QL 0.352 . Tbg972.9.7210 530 YAEEVPK|TL 0.069 . Tbg972.9.7210 537 TLTALQK|HP 0.068 . Tbg972.9.7210 549 LENGLSR|YE 0.105 . Tbg972.9.7210 556 YEGIYPK|DS 0.076 . Tbg972.9.7210 566 TMVGSVK|GH 0.065 . Tbg972.9.7210 572 KGHIVFK|RS 0.062 . Tbg972.9.7210 573 GHIVFKR|SA 0.533 *ProP* Tbg972.9.7210 580 SAVVSLR|SR 0.144 . Tbg972.9.7210 582 VVSLRSR|DG 0.087 . Tbg972.9.7210 587 SRDGWLR|EG 0.083 . Tbg972.9.7210 590 GWLREGR|TV 0.478 . Tbg972.9.7210 600 GEEEPYK|VI 0.060 . Tbg972.9.7210 608 IPPPPSR|PF 0.092 . Tbg972.9.7210 612 PSRPFSK|SS 0.095 . Tbg972.9.7210 623 FGVWQTK|PF 0.067 . Tbg972.9.7210 638 EDGSIPK|HG 0.062 . Tbg972.9.7210 650 WYILLDK|PA 0.070 . Tbg972.9.7210 666 QQPNIIR|VA 0.086 . Tbg972.9.7210 669 NIIRVAR|RM 0.225 . Tbg972.9.7210 670 IIRVARR|MN 0.193 . Tbg972.9.7210 683 IVVTGYR|RR 0.064 . Tbg972.9.7210 684 VVTGYRR|RR 0.070 . Tbg972.9.7210 685 VTGYRRR|RL 0.132 . Tbg972.9.7210 686 TGYRRRR|LN 0.366 . Tbg972.9.7210 691 RRLNEAR|SS 0.236 . Tbg972.9.7210 705 TDGIIVK|ET 0.067 . Tbg972.9.7210 714 NTGSLVK|AY 0.063 . Tbg972.9.7210 720 KAYEEWK|QL 0.069 . Tbg972.9.7210 730 EEQEAAK|RK 0.064 . Tbg972.9.7210 731 EQEAAKR|KQ 0.140 . Tbg972.9.7210 732 QEAAKRK|QR 0.089 . Tbg972.9.7210 734 AAKRKQR|AY 0.341 . Tbg972.9.7210 737 RKQRAYR|WW 0.452 . Tbg972.9.7210 746 MHFVQHR|LA 0.103 . Tbg972.9.7210 751 HRLAYLR|IR 0.091 . Tbg972.9.7210 753 LAYLRIR|QQ 0.093 . ____________________________^_________________

  • Fasta :-

    >Tbg972.9.7210 ATGGGGCAGCAGAAAAAAGATGCGGCTCAATCTGTAGCTGCCGTTGCTGCTCAGAATGTT GACAGTTACCTTCGCGGTGTGACGAGTCGAGCCCGAGTTCCTTCGGCAACTGGCGGAAGA GGTACGCGTCGTAGGCTGGCCTCCCAGGCAGAAGTCGCTGCAGCCAAGATCAAGGAGCAA CCTAAGTCTCTTGATGACTTCGCTGACGCTGATAATGGTGATGATGAGTGGGAGGAAGTG ATGTTACCCACCTCATTTACACCGTCTAGCAGCACAAAACCCGAGGTAAAGGTGAAAGAT GAGAAAAATGGCATCGTGGAAACCCCAGAATTTGGTGCAACAGGACCGAACCCCGGACAG GGAGGTGTGAAGGCGGAGCTAGTGGATCTCACTGACGAGGAAAACAGACACAATAGGATA TTGGCGAGTGTAACGCCAATGGGGGGTCAACAATCTTCCTCCCCCTCCTCCGGGCAATGG CGGCAGCGTGATCCCGCCTATGAGCAAATGCTTGAACAGCAACAACTTCTTGCCGCGAAG CGCCGCTCGGAACGCACAAAACGTGCTGTGGAAGAAATTTCAACCTTGTTATTTGCCTTG TTGCGGGGAAGGAAAATTGTGCAACAGGCGCGTCACCCAAAGTTAGTTCGTGGTCTTCTG CGCTTATATGTAGTTGAGGATGCGACATCCAAGACGTACCCGCTTTTGCGTGCCGTTCTT CAAGCGAAAGGTTTGTATGCAAAGGCGATGAATCCTGCTGTGAGTACCCCGTCCCTTGCA CCTTGTTGGGTAACCGCTAATAAGGACAGTGTCAACAATTACACTTCTGCTTCTATTTCC GCGTTGCTTCGTGGTATAGAATGTGTTTTTGTACTGGATGGCGGTATAGAACATGCGGCT CTATCTAACTGGGCTGCTCCCATACAACCTGGGTATCTTTTTGAGCAGCTGCGTAAGTAC CGCTACTCCATTGGATCACCTGGGTGTAGAATCGTTCTCCCCCATAGTTTGTATATTTGC GCTGTGTTTCTTTCTCTCGCAGCTGTTTCTAATGTTTCCTGCCGTCTGGTGGTGGCGGTG GAACGAATGCGGCGGGGAGACATGTCGGAAAAAAGCGGGAGCGACGGAGGATCGCCGCCG AAAGAAGCAATGAGTTTGTTTGGTTCTGGAAAGAAGCGCAAACGGGGCGATGATGCTGGT GCGAAGCAAAATACTCCGAAAAGACTGCCATCTTCTTGCTTCTGGTTGGAAGTTTGGTGC CCGCAGCGGCAGTCGTACATTTCAGTTAATCCATGTGGGGGTTGCGCCACACTTTTTGCC GCTCCATACACCTTTTCTGTGGGCGGAGATGCGATTATGGACGTCACCCCCCGTTACTCC ATTAAGTACAGCAGTGCTTTCACTCACAGGTTAGGCCGATGTGATAGGTATCGCCACATC TGGAAAGACCTTCAGTGGAACGATAACAGGGAGGCGTCTGAAGTCATCGTCGACTTGTTT CGCAGGGATGTTGGTAAATATACGGAGGCGCAGATGCAGCGGGAGAAGAAGCAGCTGCAT TCCCTCACGTACGCGGAGGAGGTGCCGAAGACCCTCACGGCACTGCAGAAGCATCCGCTT TTCATTCTCGAAAATGGTCTCAGTCGGTACGAGGGCATATACCCCAAAGACAGCACCACC ATGGTTGGCAGCGTTAAGGGCCATATTGTGTTCAAGCGCTCTGCAGTTGTGAGCCTTCGC AGTCGCGATGGTTGGCTGCGGGAGGGTCGCACGGTGTCCGGTGAAGAAGAACCATACAAA GTAATACCACCGCCACCCTCACGTCCCTTCTCGAAGTCGAGTGCTTTATTTGGTGTTTGG CAAACGAAACCATTCGCTCCGGAGCCGTTAGGTGAGGATGGTAGTATTCCCAAGCACGGC AATACGCAGTGGTATATTCTGTTGGATAAACCAGCACCAATCGGATTGGTGCATATGCAG CAACCGAATATTATTCGGGTGGCAAGGCGTATGAACATTGATTTTGGTATCGTTGTTACT GGATATAGGCGGCGGCGTTTGAATGAAGCGCGTTCCTCAGGATGGGAAGTGGTGACTGAC GGTATCATTGTGAAGGAAACTAACACAGGAAGTCTTGTCAAGGCTTATGAGGAGTGGAAG CAATTAACGGAGGAACAGGAGGCAGCGAAAAGGAAGCAGAGGGCGTACCGGTGGTGGATG CATTTTGTGCAGCATAGACTGGCATACTTGCGTATTCGTCAGCAGTATTTGGAGGGAGCT ACACATGGACATCTTTCCTCTCACTGA
  • Download Fasta

  • Fasta :-

    MGQQKKDAAQSVAAVAAQNVDSYLRGVTSRARVPSATGGRGTRRRLASQAEVAAAKIKEQ PKSLDDFADADNGDDEWEEVMLPTSFTPSSSTKPEVKVKDEKNGIVETPEFGATGPNPGQ GGVKAELVDLTDEENRHNRILASVTPMGGQQSSSPSSGQWRQRDPAYEQMLEQQQLLAAK RRSERTKRAVEEISTLLFALLRGRKIVQQARHPKLVRGLLRLYVVEDATSKTYPLLRAVL QAKGLYAKAMNPAVSTPSLAPCWVTANKDSVNNYTSASISALLRGIECVFVLDGGIEHAA LSNWAAPIQPGYLFEQLRKYRYSIGSPGCRIVLPHSLYICAVFLSLAAVSNVSCRLVVAV ERMRRGDMSEKSGSDGGSPPKEAMSLFGSGKKRKRGDDAGAKQNTPKRLPSSCFWLEVWC PQRQSYISVNPCGGCATLFAAPYTFSVGGDAIMDVTPRYSIKYSSAFTHRLGRCDRYRHI WKDLQWNDNREASEVIVDLFRRDVGKYTEAQMQREKKQLHSLTYAEEVPKTLTALQKHPL FILENGLSRYEGIYPKDSTTMVGSVKGHIVFKRSAVVSLRSRDGWLREGRTVSGEEEPYK VIPPPPSRPFSKSSALFGVWQTKPFAPEPLGEDGSIPKHGNTQWYILLDKPAPIGLVHMQ QPNIIRVARRMNIDFGIVVTGYRRRRLNEARSSGWEVVTDGIIVKETNTGSLVKAYEEWK QLTEEQEAAKRKQRAYRWWMHFVQHRLAYLRIRQQYLEGATHGHLSSH

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.9.721091 STPSSSTKPE0.991unspTbg972.9.721091 STPSSSTKPE0.991unspTbg972.9.721091 STPSSSTKPE0.991unspTbg972.9.7210183 SAKRRSERTK0.995unspTbg972.9.7210369 SRGDMSEKSG0.997unspTbg972.9.7210372 SMSEKSGSDG0.996unspTbg972.9.7210593 SGRTVSGEEE0.997unspTbg972.9.7210611 SSRPFSKSSA0.994unspTbg972.9.721035 SARVPSATGG0.99unspTbg972.9.721063 SEQPKSLDDF0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India