Tbg972.9.8400 | ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.9.8400OTHER0.9990430.0002610.000696
No Results

  • Fasta :-

    >Tbg972.9.8400 MRAEIPGVVPAVMSQVSEHQLPHLYPRHTAVSDSTALPREKSTLQRTDTTDSQLFSLADL QLARGNTRRPSRSRPTSPIRKDRIPRPPSVEFDVHLEVPRPHIRVSALPKHLMWPLPIPL PNLGNTCYMNSVVQCLRQSPSLALALEQCQLNAESHPAAAAMLNFFRMSEGDPKEFLVTF KSEAAKYNDEFKDFTQADAHEFLRTFLSVVHNEMNTAPRAKLHIDDMGYVGKEDEETAFG MWRDQFACFDKSPIYDLFGGTTLGTCFCNSCENSSRTFEAFLDLSLPIGHEMPFGANLEA ILQANFVEGKAEKMDGSNRIYCSRCKRLRSGSRCVVVRQWPKLLVLHLKRFDEYGKKNLV NVIYPETFMTGGEKSLRYSLYGVLMHSGTEMSGHYTSYVRVAFGEWYLCNDGAITPSRSV DVMQELEKAYILFYAEVPQVEPTFF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/80 Sequence name : 80 Sequence length : 445 VALUES OF COMPUTED PARAMETERS Coef20 : 3.572 CoefTot : -1.639 ChDiff : -3 ZoneTo : 32 KR : 2 DE : 2 CleavSite : 29 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.012 0.718 0.215 0.468 MesoH : -0.309 0.221 -0.338 0.205 MuHd_075 : 22.624 18.958 8.484 5.214 MuHd_095 : 22.207 24.574 7.639 5.701 MuHd_100 : 20.476 20.433 5.294 3.900 MuHd_105 : 18.122 15.922 4.017 3.782 Hmax_075 : 9.800 10.300 1.376 4.120 Hmax_095 : 10.700 21.262 0.891 6.038 Hmax_100 : 10.000 19.700 1.005 4.610 Hmax_105 : 11.100 14.600 0.824 5.157 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8503 0.1497 DFMC : 0.9564 0.0436
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 445 Tbg972.9.8400 MRAEIPGVVPAVMSQVSEHQLPHLYPRHTAVSDSTALPREKSTLQRTDTTDSQLFSLADLQLARGNTRRPSRSRPTSPIR 80 KDRIPRPPSVEFDVHLEVPRPHIRVSALPKHLMWPLPIPLPNLGNTCYMNSVVQCLRQSPSLALALEQCQLNAESHPAAA 160 AMLNFFRMSEGDPKEFLVTFKSEAAKYNDEFKDFTQADAHEFLRTFLSVVHNEMNTAPRAKLHIDDMGYVGKEDEETAFG 240 MWRDQFACFDKSPIYDLFGGTTLGTCFCNSCENSSRTFEAFLDLSLPIGHEMPFGANLEAILQANFVEGKAEKMDGSNRI 320 YCSRCKRLRSGSRCVVVRQWPKLLVLHLKRFDEYGKKNLVNVIYPETFMTGGEKSLRYSLYGVLMHSGTEMSGHYTSYVR 400 VAFGEWYLCNDGAITPSRSVDVMQELEKAYILFYAEVPQVEPTFF 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......P......................................................................... 400 ............................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.9.8400 2 -----MR|AE 0.095 . Tbg972.9.8400 27 LPHLYPR|HT 0.126 . Tbg972.9.8400 39 DSTALPR|EK 0.099 . Tbg972.9.8400 41 TALPREK|ST 0.083 . Tbg972.9.8400 46 EKSTLQR|TD 0.085 . Tbg972.9.8400 64 ADLQLAR|GN 0.078 . Tbg972.9.8400 68 LARGNTR|RP 0.097 . Tbg972.9.8400 69 ARGNTRR|PS 0.155 . Tbg972.9.8400 72 NTRRPSR|SR 0.353 . Tbg972.9.8400 74 RRPSRSR|PT 0.144 . Tbg972.9.8400 80 RPTSPIR|KD 0.080 . Tbg972.9.8400 81 PTSPIRK|DR 0.099 . Tbg972.9.8400 83 SPIRKDR|IP 0.253 . Tbg972.9.8400 86 RKDRIPR|PP 0.285 . Tbg972.9.8400 100 VHLEVPR|PH 0.074 . Tbg972.9.8400 104 VPRPHIR|VS 0.076 . Tbg972.9.8400 110 RVSALPK|HL 0.087 . Tbg972.9.8400 137 SVVQCLR|QS 0.066 . Tbg972.9.8400 167 AMLNFFR|MS 0.093 . Tbg972.9.8400 174 MSEGDPK|EF 0.061 . Tbg972.9.8400 181 EFLVTFK|SE 0.075 . Tbg972.9.8400 186 FKSEAAK|YN 0.086 . Tbg972.9.8400 192 KYNDEFK|DF 0.092 . Tbg972.9.8400 204 DAHEFLR|TF 0.085 . Tbg972.9.8400 219 EMNTAPR|AK 0.124 . Tbg972.9.8400 221 NTAPRAK|LH 0.067 . Tbg972.9.8400 232 DMGYVGK|ED 0.068 . Tbg972.9.8400 243 TAFGMWR|DQ 0.122 . Tbg972.9.8400 251 QFACFDK|SP 0.080 . Tbg972.9.8400 276 SCENSSR|TF 0.105 . Tbg972.9.8400 310 ANFVEGK|AE 0.060 . Tbg972.9.8400 313 VEGKAEK|MD 0.065 . Tbg972.9.8400 319 KMDGSNR|IY 0.071 . Tbg972.9.8400 324 NRIYCSR|CK 0.077 . Tbg972.9.8400 326 IYCSRCK|RL 0.060 . Tbg972.9.8400 327 YCSRCKR|LR 0.611 *ProP* Tbg972.9.8400 329 SRCKRLR|SG 0.158 . Tbg972.9.8400 333 RLRSGSR|CV 0.098 . Tbg972.9.8400 338 SRCVVVR|QW 0.139 . Tbg972.9.8400 342 VVRQWPK|LL 0.061 . Tbg972.9.8400 349 LLVLHLK|RF 0.066 . Tbg972.9.8400 350 LVLHLKR|FD 0.175 . Tbg972.9.8400 356 RFDEYGK|KN 0.054 . Tbg972.9.8400 357 FDEYGKK|NL 0.076 . Tbg972.9.8400 374 FMTGGEK|SL 0.073 . Tbg972.9.8400 377 GGEKSLR|YS 0.096 . Tbg972.9.8400 400 HYTSYVR|VA 0.072 . Tbg972.9.8400 418 GAITPSR|SV 0.262 . Tbg972.9.8400 428 VMQELEK|AY 0.056 . ____________________________^_________________

  • Fasta :-

    >Tbg972.9.8400 ATGCGTGCGGAGATTCCCGGTGTTGTCCCTGCGGTGATGTCACAGGTGTCGGAACATCAA CTGCCGCATTTATACCCCCGGCACACTGCTGTAAGCGATAGTACTGCACTCCCACGTGAG AAAAGTACATTGCAGCGGACTGACACAACTGACTCTCAGTTGTTTTCGTTGGCGGATCTT CAGCTGGCGCGTGGAAACACCCGGCGGCCGTCCCGTAGCCGACCGACTAGTCCGATTAGG AAAGATAGAATCCCACGCCCGCCTTCAGTCGAATTTGATGTTCATCTAGAGGTGCCTAGG CCGCACATCCGTGTTTCGGCGTTGCCAAAACATCTCATGTGGCCACTGCCAATTCCGCTT CCAAACTTAGGTAACACATGTTATATGAATTCGGTGGTGCAGTGTCTTCGACAGAGCCCG TCGTTGGCTCTCGCCTTAGAGCAGTGCCAGTTGAATGCTGAATCACATCCGGCAGCGGCG GCGATGCTGAACTTCTTTAGGATGTCGGAAGGGGACCCAAAGGAATTTCTCGTTACCTTC AAATCCGAAGCAGCGAAGTACAATGATGAATTTAAGGATTTCACTCAAGCGGATGCGCAT GAGTTTCTTAGAACCTTCCTTTCGGTAGTGCACAATGAAATGAATACCGCACCTCGCGCT AAGTTGCACATTGATGATATGGGTTATGTTGGCAAGGAGGATGAGGAGACAGCGTTCGGG ATGTGGCGTGATCAGTTCGCATGTTTCGACAAATCTCCCATTTACGATCTCTTTGGGGGA ACCACGCTTGGGACTTGTTTCTGTAACAGCTGCGAAAATTCTTCAAGGACCTTTGAAGCG TTTTTGGATCTTTCATTACCTATAGGACACGAAATGCCATTTGGTGCCAATCTTGAGGCC ATTCTTCAGGCTAACTTTGTGGAAGGTAAAGCGGAGAAAATGGATGGAAGTAATCGTATT TACTGCTCACGATGCAAACGCCTTCGCTCGGGAAGCCGATGTGTTGTCGTGAGGCAATGG CCAAAGTTATTAGTCTTGCATTTGAAACGATTTGACGAGTATGGGAAGAAGAATCTTGTA AATGTCATATACCCCGAAACCTTCATGACAGGTGGGGAGAAATCATTGCGATATAGTTTG TATGGCGTATTGATGCATAGCGGTACGGAGATGTCTGGACATTACACAAGTTATGTGCGT GTGGCGTTTGGCGAGTGGTACCTTTGTAATGATGGAGCAATTACACCTTCGCGGTCTGTT GATGTAATGCAAGAACTTGAGAAGGCGTATATTCTCTTTTATGCAGAGGTACCTCAGGTT GAACCAACTTTTTTTTGA
  • Download Fasta

  • Fasta :-

    MRAEIPGVVPAVMSQVSEHQLPHLYPRHTAVSDSTALPREKSTLQRTDTTDSQLFSLADL QLARGNTRRPSRSRPTSPIRKDRIPRPPSVEFDVHLEVPRPHIRVSALPKHLMWPLPIPL PNLGNTCYMNSVVQCLRQSPSLALALEQCQLNAESHPAAAAMLNFFRMSEGDPKEFLVTF KSEAAKYNDEFKDFTQADAHEFLRTFLSVVHNEMNTAPRAKLHIDDMGYVGKEDEETAFG MWRDQFACFDKSPIYDLFGGTTLGTCFCNSCENSSRTFEAFLDLSLPIGHEMPFGANLEA ILQANFVEGKAEKMDGSNRIYCSRCKRLRSGSRCVVVRQWPKLLVLHLKRFDEYGKKNLV NVIYPETFMTGGEKSLRYSLYGVLMHSGTEMSGHYTSYVRVAFGEWYLCNDGAITPSRSV DVMQELEKAYILFYAEVPQVEPTFF

  • title: Active Site
  • coordinates: N122,C127,H394,D411
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.9.840089 SPRPPSVEFD0.997unspTbg972.9.840089 SPRPPSVEFD0.997unspTbg972.9.840089 SPRPPSVEFD0.997unspTbg972.9.8400169 SFFRMSEGDP0.996unspTbg972.9.840071 STRRPSRSRP0.997unspTbg972.9.840077 SSRPTSPIRK0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India