YBL041W | proteasome core particle subunit beta 6

UniProt_ID: P23724

Computed_GO_Component_IDs: GO:0005737 GO:0005634 GO:0000502 GO:0005839
Computed_GO_Components: cytoplasm nucleus proteasome complex proteasome core complex
Computed_GO_Function_IDs: GO:0004175 GO:0016787 GO:0008233 GO:0004298
Computed_GO_Functions: endopeptidase activity hydrolase activity peptidase activity threonine-type endopeptidase activity
Computed_GO_Process_IDs: GO:0006508 GO:0051603
Computed_GO_Processes: proteolysis proteolysis involved in cellular protein catabolic process
Curated_GO_Component_IDs: GO:0005737 GO:0005829 GO:0005789 GO:0005634 GO:0005839 GO:0019774 GO:0034515
Curated_GO_Components: cytoplasm cytosol endoplasmic reticulum membrane nucleus proteasome core complex proteasome core complex, beta-subunit complex proteasome storage granule
Curated_GO_Function_IDs: GO:0004175 GO:0003674
Curated_GO_Functions: endopeptidase activity molecular_function
Curated_GO_Processes: proteasomal protein catabolic process proteasomal ubiquitin-independent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	YBL041W	OTHER	0.993727	0.006258	0.000015

No Results

Fasta :-
>YBL041W MATIASEYSSEASNTPIEHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEP KVFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKR FFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYE PGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKR D
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YBL041W.fa Sequence name : YBL041W Sequence length : 241 VALUES OF COMPUTED PARAMETERS Coef20 : 3.590 CoefTot : 0.394 ChDiff : -5 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.688 1.135 0.065 0.581 MesoH : -1.102 -0.087 -0.490 0.123 MuHd_075 : 5.460 1.872 0.941 1.290 MuHd_095 : 31.840 17.750 8.700 5.158 MuHd_100 : 29.978 13.074 8.151 3.772 MuHd_105 : 23.186 5.811 6.500 1.716 Hmax_075 : 3.033 4.500 -0.821 2.710 Hmax_095 : 10.762 7.525 1.067 3.610 Hmax_100 : 10.000 6.400 0.721 3.610 Hmax_105 : 9.300 4.500 0.349 2.530 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9201 0.0799 DFMC : 0.9476 0.0524

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 241 YBL041W MATIASEYSSEASNTPIEHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADG 80 DALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGA 160 AASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKR 240 D 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 . 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YBL041W 47 VLAGDTR|NI 0.082 . YBL041W 57 DYSINSR|YE 0.100 . YBL041W 61 NSRYEPK|VF 0.075 . YBL041W 85 DGDALVK|RF 0.056 . YBL041W 86 GDALVKR|FK 0.245 . YBL041W 88 ALVKRFK|NS 0.059 . YBL041W 92 RFKNSVK|WY 0.066 . YBL041W 101 HFDHNDK|KL 0.059 . YBL041W 102 FDHNDKK|LS 0.084 . YBL041W 110 SINSAAR|NI 0.110 . YBL041W 119 QHLLYGK|RF 0.058 . YBL041W 120 HLLYGKR|FF 0.173 . YBL041W 138 GLDEDGK|GA 0.064 . YBL041W 152 PVGSYER|EQ 0.074 . YBL041W 156 YEREQCR|AG 0.112 . YBL041W 176 DNQVNFK|NQ 0.063 . YBL041W 186 EPGTNGK|VK 0.058 . YBL041W 188 GTNGKVK|KP 0.077 . YBL041W 189 TNGKVKK|PL 0.126 . YBL041W 192 KVKKPLK|YL 0.081 . YBL041W 201 SVEEVIK|LV 0.085 . YBL041W 204 EVIKLVR|DS 0.092 . YBL041W 213 FTSATER|HI 0.109 . YBL041W 228 EILIVTK|DG 0.064 . YBL041W 232 VTKDGVR|KE 0.067 . YBL041W 233 TKDGVRK|EF 0.083 . YBL041W 239 KEFYELK|RD 0.060 . YBL041W 240 EFYELKR|D- 0.196 . ____________________________^_________________

Fasta :-
>YBL041W ATGGCCACTATTGCATCAGAATACTCTTCGGAGGCGTCAAATACACCCATTGAACATCAA TTCAATCCTTACGGTGATAATGGTGGTACAATCCTGGGCATTGCAGGTGAAGATTTCGCA GTGTTAGCAGGCGATACAAGAAATATCACCGATTACTCAATTAATTCTCGTTATGAACCC AAGGTTTTTGATTGTGGTGATAACATAGTCATGTCGGCGAATGGATTTGCAGCAGACGGC GACGCTTTAGTAAAAAGATTCAAAAATAGTGTAAAATGGTACCATTTCGACCACAACGAC AAAAAACTATCTATAAACTCTGCAGCAAGGAACATTCAACATCTTCTGTACGGGAAGAGG TTTTTCCCTTACTACGTTCATACGATCATTGCGGGTCTTGACGAAGATGGTAAGGGCGCT GTCTATTCGTTCGACCCAGTTGGCTCCTACGAAAGAGAACAGTGTAGAGCAGGTGGTGCT GCGGCATCATTGATCATGCCATTTTTGGACAATCAGGTTAATTTCAAAAATCAATATGAG CCAGGTACAAACGGTAAAGTCAAAAAGCCTTTGAAATACTTGTCCGTGGAAGAAGTCATC AAACTGGTGAGAGACTCGTTCACTTCTGCTACAGAAAGACATATACAAGTGGGTGATGGG CTGGAAATCCTTATTGTCACCAAGGATGGTGTAAGGAAAGAATTTTATGAGCTAAAAAGA GATTAA
Download Fasta

Fasta :-

MATIASEYSSEASNTPIEHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEP KVFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKR FFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYE PGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKR D

No Results

title: active site
coordinates: G29,D45,R47,K61,A160,H214,V217,G218

	ID	Site	Position	Gscore	Iscore
	YBL041W	T	3	0.650	0.147

	ID	Site	Position	Gscore	Iscore
	YBL041W	T	3	0.650	0.147

YBL041W | proteasome core particle subunit beta 6

ID's

UniProt_ID: P23724

GEO Functions

Computed_GO_Component_IDs: GO:0005737 GO:0005634 GO:0000502 GO:0005839

Computed_GO_Components: cytoplasm nucleus proteasome complex proteasome core complex

Computed_GO_Function_IDs: GO:0004175 GO:0016787 GO:0008233 GO:0004298

Computed_GO_Functions: endopeptidase activity hydrolase activity peptidase activity threonine-type endopeptidase activity

Computed_GO_Process_IDs: GO:0006508 GO:0051603

Computed_GO_Processes: proteolysis proteolysis involved in cellular protein catabolic process

Curated_GO_Component_IDs: GO:0005737 GO:0005829 GO:0005789 GO:0005634 GO:0005839 GO:0019774 GO:0034515

Curated_GO_Components: cytoplasm cytosol endoplasmic reticulum membrane nucleus proteasome core complex proteasome core complex, beta-subunit complex proteasome storage granule

Curated_GO_Function_IDs: GO:0004175 GO:0003674

Curated_GO_Functions: endopeptidase activity molecular_function

Curated_GO_Processes: proteasomal protein catabolic process proteasomal ubiquitin-independent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

YBL041W

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India