YBL045C | ubiquinol--cytochrome-c reductase subunit COR1

_IDPredictionOTHERSPmTPCS_Position
YBL045CmTP0.0676930.0018320.930476CS pos: 18-19. RSL-AT. Pr: 0.4879
No Results

  • Fasta :-

    >YBL045C MLRTVTSKTVSNQFKRSLATAVATPKAEVTQLSNGIVVATEHNPSAHTASVGVVFGSGAA NENPYNNGVSNLWKNIFLSKENSAVAAKEGLALSSNISRDFQSYIVSSLPGSTDKSLDFL NQSFIQQKANLLSSSNFEATKKSVLKQVQDFEENDHPNRVLEHLHSTAFQNTPLSLPTRG TLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLSLQTGTKPVLKK KAAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGI KLLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTD TEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKA WAGKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YBL045C.fa Sequence name : YBL045C Sequence length : 457 VALUES OF COMPUTED PARAMETERS Coef20 : 4.944 CoefTot : 0.533 ChDiff : -1 ZoneTo : 27 KR : 5 DE : 0 CleavSite : 26 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.218 0.829 0.062 0.444 MesoH : -0.443 0.084 -0.442 0.185 MuHd_075 : 29.548 21.446 7.519 7.689 MuHd_095 : 36.123 25.058 9.970 8.602 MuHd_100 : 30.958 18.302 8.419 6.792 MuHd_105 : 33.240 14.950 8.646 6.189 Hmax_075 : 9.100 15.400 2.592 5.020 Hmax_095 : 13.737 15.200 2.521 5.060 Hmax_100 : 14.500 15.200 2.521 5.060 Hmax_105 : 13.100 10.300 1.717 3.610 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0044 0.9956 DFMC : 0.0071 0.9929 This protein is probably imported in mitochondria. f(Ser) = 0.1111 f(Arg) = 0.0741 CMi = 0.63966 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 457 YBL045C MLRTVTSKTVSNQFKRSLATAVATPKAEVTQLSNGIVVATEHNPSAHTASVGVVFGSGAANENPYNNGVSNLWKNIFLSK 80 ENSAVAAKEGLALSSNISRDFQSYIVSSLPGSTDKSLDFLNQSFIQQKANLLSSSNFEATKKSVLKQVQDFEENDHPNRV 160 LEHLHSTAFQNTPLSLPTRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLSLQTGTKPVLKK 240 KAAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEYQLCDNFNHFSL 320 SYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDTEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSK 400 LSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YBL045C 3 ----MLR|TV 0.107 . YBL045C 8 LRTVTSK|TV 0.097 . YBL045C 15 TVSNQFK|RS 0.069 . YBL045C 16 VSNQFKR|SL 0.478 . YBL045C 26 TAVATPK|AE 0.068 . YBL045C 74 GVSNLWK|NI 0.073 . YBL045C 80 KNIFLSK|EN 0.069 . YBL045C 88 NSAVAAK|EG 0.061 . YBL045C 99 LSSNISR|DF 0.128 . YBL045C 115 LPGSTDK|SL 0.088 . YBL045C 128 QSFIQQK|AN 0.060 . YBL045C 141 SNFEATK|KS 0.059 . YBL045C 142 NFEATKK|SV 0.217 . YBL045C 146 TKKSVLK|QV 0.100 . YBL045C 159 ENDHPNR|VL 0.086 . YBL045C 179 PLSLPTR|GT 0.120 . YBL045C 215 VGTGNIK|HE 0.058 . YBL045C 226 VNSIESK|NL 0.078 . YBL045C 235 SLQTGTK|PV 0.080 . YBL045C 239 GTKPVLK|KK 0.065 . YBL045C 240 TKPVLKK|KA 0.116 . YBL045C 241 KPVLKKK|AA 0.130 . YBL045C 250 FLGSEVR|LR 0.079 . YBL045C 252 GSEVRLR|DD 0.090 . YBL045C 258 RDDTLPK|AW 0.060 . YBL045C 279 PNYFVAK|LA 0.096 . YBL045C 296 AFEPASR|LQ 0.086 . YBL045C 301 SRLQGIK|LL 0.070 . YBL045C 323 HFSLSYK|DS 0.102 . YBL045C 335 GFSTATR|NV 0.141 . YBL045C 349 LIHFTLK|QW 0.065 . YBL045C 353 TLKQWNR|LT 0.114 . YBL045C 365 TDTEVER|AK 0.080 . YBL045C 367 TEVERAK|SL 0.090 . YBL045C 371 RAKSLLK|LQ 0.058 . YBL045C 397 GAEVLIK|GS 0.063 . YBL045C 400 VLIKGSK|LS 0.053 . YBL045C 408 SLGEAFK|KI 0.070 . YBL045C 409 LGEAFKK|ID 0.086 . YBL045C 416 IDAITVK|DV 0.093 . YBL045C 419 ITVKDVK|AW 0.061 . YBL045C 424 VKAWAGK|RL 0.071 . YBL045C 425 KAWAGKR|LW 0.167 . YBL045C 447 GLLDYMR|IR 0.092 . YBL045C 449 LDYMRIR|SD 0.128 . YBL045C 456 SDMSMMR|W- 0.100 . ____________________________^_________________

  • Fasta :-

    >YBL045C ATGCTAAGAACAGTAACTTCAAAGACTGTATCTAACCAGTTCAAGAGGTCTTTGGCTACA GCTGTAGCAACCCCCAAGGCCGAAGTAACGCAATTATCTAACGGTATAGTTGTAGCCACT GAGCATAATCCTTCCGCTCACACAGCCTCTGTCGGTGTTGTCTTCGGCTCCGGTGCTGCC AACGAAAACCCTTATAACAACGGGGTTTCCAATTTATGGAAGAACATCTTTCTATCCAAA GAAAACTCTGCTGTTGCCGCCAAGGAAGGTTTGGCATTGTCTTCCAATATCTCCAGAGAC TTCCAATCTTACATTGTATCTTCTTTGCCAGGTTCTACCGATAAATCACTAGACTTCTTG AATCAGTCTTTCATCCAACAAAAGGCTAATTTGCTATCTTCTTCTAACTTCGAGGCCACG AAGAAATCTGTCTTGAAGCAAGTTCAAGATTTTGAAGAAAACGACCATCCCAACAGAGTT TTGGAACATTTACACTCCACCGCCTTCCAAAACACTCCATTATCTTTGCCTACTAGAGGT ACTTTGGAGTCCTTGGAGAATTTAGTTGTTGCTGATCTGGAATCTTTTGCCAATAACCAT TTCTTGAATTCAAATGCTGTTGTTGTTGGTACCGGTAATATCAAACATGAGGATTTAGTA AATTCCATCGAATCCAAAAACCTAAGTTTGCAAACCGGTACCAAGCCCGTACTCAAGAAA AAGGCCGCTTTCTTGGGTTCCGAAGTTAGATTGAGAGACGACACCTTGCCAAAGGCGTGG ATTTCGCTGGCTGTGGAAGGTGAACCTGTCAATTCACCAAATTATTTTGTTGCTAAATTA GCCGCCCAAATTTTCGGCTCATACAACGCCTTCGAACCCGCTTCTAGATTACAAGGTATC AAATTGTTAGACAACATACAGGAGTACCAATTATGCGACAATTTCAATCATTTCTCTCTT TCTTACAAAGATTCCGGTTTATGGGGGTTCTCTACGGCCACGAGAAACGTTACCATGATT GACGACCTCATCCATTTCACTTTGAAACAATGGAACAGATTGACCATTTCTGTCACTGAT ACTGAAGTTGAACGTGCCAAATCGCTGTTGAAATTACAATTAGGGCAGTTATACGAATCT GGTAATCCCGTCAATGACGCTAACTTGTTAGGCGCAGAAGTCCTAATCAAGGGCTCCAAA CTGTCTCTGGGTGAGGCTTTCAAGAAAATTGATGCAATCACAGTCAAAGATGTTAAGGCT TGGGCCGGTAAGAGATTATGGGACCAAGATATTGCTATTGCTGGTACAGGCCAAATTGAA GGGTTATTAGATTACATGAGAATCAGAAGTGACATGTCCATGATGAGATGGTAA
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  • Fasta :-

    MLRTVTSKTVSNQFKRSLATAVATPKAEVTQLSNGIVVATEHNPSAHTASVGVVFGSGAA NENPYNNGVSNLWKNIFLSKENSAVAAKEGLALSSNISRDFQSYIVSSLPGSTDKSLDFL NQSFIQQKANLLSSSNFEATKKSVLKQVQDFEENDHPNRVLEHLHSTAFQNTPLSLPTRG TLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLSLQTGTKPVLKK KAAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGI KLLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTD TEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKA WAGKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
YBL045C321 SHFSLSYKDS0.996unspYBL045C402 SGSKLSLGEA0.991unsp

YBL045C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India