YBR139W | carboxypeptidase C

_IDPredictionOTHERSPmTPCS_Position
YBR139WSP0.0250860.9744080.000506CS pos: 24-25. GRA-FS. Pr: 0.6750
No Results

  • Fasta :-

    >YBR139W MKYLNLVFVLQLLISIKYASFGRAFSLFEDDTTFANLDKQLKLPQNTQQTLKLDRLNHDD PLFTTFISSVDTDYSLRLRTVDPSKLGIDTVKQWSGYMDYKDSKHFFYWFFESRNDPAND PIILWLNGGPGCSSFTGLLFELGPSSIGADMKPIHNPYSWNNNASMIFLEQPLGVGFSYG DEKVSSTKLAGKDAYIFLELFFEAFPHLRSNDFHIAGESYAGHYIPQIAHEIVVKNPERT FNLTSVMIGNGITDPLIQADYYEPMACGKGGYHPVLSSEECEKMSKAAGRCRRLNKLCYA SKSSLPCIVATAYCDSALLEPYINTGLNVYDIRGPCEDNSTDGMCYTGLRYVDQYMNFPE VQETLGSDVHNYSGCDNDVFTGFLFTGDGSKPFQQYIAELLNHNIPVLIYAGDKDYICNW LGNHAWSNELEWINKRRYQRRMLRPWVSKETGEELGQVKNYGPFTFLRIYDAGHMVPYDQ PEASLEMVNSWISGNRAFSDLSTLENAS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YBR139W.fa Sequence name : YBR139W Sequence length : 508 VALUES OF COMPUTED PARAMETERS Coef20 : 4.398 CoefTot : 0.406 ChDiff : -18 ZoneTo : 28 KR : 3 DE : 0 CleavSite : 33 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.406 1.724 0.258 0.615 MesoH : -0.124 0.132 -0.334 0.277 MuHd_075 : 17.884 10.171 5.429 4.161 MuHd_095 : 17.654 17.248 4.862 5.578 MuHd_100 : 12.250 11.427 2.585 3.227 MuHd_105 : 14.182 13.671 3.567 3.158 Hmax_075 : 14.525 19.600 3.246 6.780 Hmax_095 : 13.000 17.325 2.000 5.443 Hmax_100 : 11.600 15.600 0.902 5.220 Hmax_105 : 15.400 22.517 4.016 3.840 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4578 0.5422 DFMC : 0.6108 0.3892
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 508 YBR139W MKYLNLVFVLQLLISIKYASFGRAFSLFEDDTTFANLDKQLKLPQNTQQTLKLDRLNHDDPLFTTFISSVDTDYSLRLRT 80 VDPSKLGIDTVKQWSGYMDYKDSKHFFYWFFESRNDPANDPIILWLNGGPGCSSFTGLLFELGPSSIGADMKPIHNPYSW 160 NNNASMIFLEQPLGVGFSYGDEKVSSTKLAGKDAYIFLELFFEAFPHLRSNDFHIAGESYAGHYIPQIAHEIVVKNPERT 240 FNLTSVMIGNGITDPLIQADYYEPMACGKGGYHPVLSSEECEKMSKAAGRCRRLNKLCYASKSSLPCIVATAYCDSALLE 320 PYINTGLNVYDIRGPCEDNSTDGMCYTGLRYVDQYMNFPEVQETLGSDVHNYSGCDNDVFTGFLFTGDGSKPFQQYIAEL 400 LNHNIPVLIYAGDKDYICNWLGNHAWSNELEWINKRRYQRRMLRPWVSKETGEELGQVKNYGPFTFLRIYDAGHMVPYDQ 480 PEASLEMVNSWISGNRAFSDLSTLENAS 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YBR139W 2 -----MK|YL 0.070 . YBR139W 17 QLLISIK|YA 0.080 . YBR139W 23 KYASFGR|AF 0.102 . YBR139W 39 TFANLDK|QL 0.066 . YBR139W 42 NLDKQLK|LP 0.057 . YBR139W 52 NTQQTLK|LD 0.056 . YBR139W 55 QTLKLDR|LN 0.073 . YBR139W 77 DTDYSLR|LR 0.062 . YBR139W 79 DYSLRLR|TV 0.127 . YBR139W 85 RTVDPSK|LG 0.061 . YBR139W 92 LGIDTVK|QW 0.077 . YBR139W 101 SGYMDYK|DS 0.078 . YBR139W 104 MDYKDSK|HF 0.066 . YBR139W 114 YWFFESR|ND 0.076 . YBR139W 152 SIGADMK|PI 0.071 . YBR139W 183 FSYGDEK|VS 0.073 . YBR139W 188 EKVSSTK|LA 0.071 . YBR139W 192 STKLAGK|DA 0.082 . YBR139W 209 EAFPHLR|SN 0.128 . YBR139W 235 AHEIVVK|NP 0.062 . YBR139W 239 VVKNPER|TF 0.072 . YBR139W 269 EPMACGK|GG 0.065 . YBR139W 283 SSEECEK|MS 0.069 . YBR139W 286 ECEKMSK|AA 0.071 . YBR139W 290 MSKAAGR|CR 0.085 . YBR139W 292 KAAGRCR|RL 0.092 . YBR139W 293 AAGRCRR|LN 0.313 . YBR139W 296 RCRRLNK|LC 0.138 . YBR139W 302 KLCYASK|SS 0.076 . YBR139W 333 LNVYDIR|GP 0.085 . YBR139W 350 MCYTGLR|YV 0.143 . YBR139W 391 FTGDGSK|PF 0.060 . YBR139W 414 LIYAGDK|DY 0.060 . YBR139W 435 ELEWINK|RR 0.056 . YBR139W 436 LEWINKR|RY 0.101 . YBR139W 437 EWINKRR|YQ 0.178 . YBR139W 440 NKRRYQR|RM 0.163 . YBR139W 441 KRRYQRR|ML 0.281 . YBR139W 444 YQRRMLR|PW 0.276 . YBR139W 449 LRPWVSK|ET 0.098 . YBR139W 459 EELGQVK|NY 0.062 . YBR139W 468 GPFTFLR|IY 0.129 . YBR139W 496 SWISGNR|AF 0.090 . ____________________________^_________________

  • Fasta :-

    >YBR139W ATGAAGTATCTAAACTTAGTTTTCGTGCTTCAGCTTCTTATTAGCATCAAATACGCCTCA TTCGGCCGAGCCTTTTCTCTTTTTGAAGATGATACCACCTTTGCCAATTTGGATAAACAG CTAAAGCTTCCACAGAATACACAGCAAACCCTTAAATTGGACCGTTTGAATCACGATGAT CCGCTGTTTACAACTTTTATTTCTTCTGTGGACACAGATTACAGTTTGAGACTTAGAACA GTAGATCCTTCTAAACTAGGAATTGACACCGTAAAACAATGGTCGGGTTACATGGACTAT AAGGATTCCAAACACTTTTTTTACTGGTTTTTTGAAAGTAGGAACGATCCTGCTAACGAC CCAATTATTCTTTGGTTAAATGGTGGACCTGGTTGTTCCTCGTTTACTGGGTTGCTATTT GAACTAGGCCCCTCATCAATTGGCGCCGATATGAAACCAATCCACAATCCCTATTCTTGG AATAATAACGCTTCAATGATCTTCTTAGAACAGCCACTCGGAGTCGGCTTTTCCTATGGT GATGAAAAAGTCTCCTCTACAAAATTAGCAGGCAAAGATGCGTACATTTTCCTGGAATTG TTTTTTGAAGCTTTTCCTCATTTACGCTCCAACGATTTCCACATTGCAGGCGAATCCTAT GCAGGACATTATATCCCTCAAATTGCACATGAGATCGTTGTCAAGAACCCTGAAAGAACG TTCAATTTAACTTCAGTTATGATTGGTAATGGTATCACAGACCCTTTGATTCAAGCAGAT TATTATGAACCAATGGCATGCGGGAAAGGGGGCTATCACCCTGTTCTCTCATCAGAAGAA TGTGAGAAAATGAGTAAAGCTGCAGGTCGTTGTCGTAGGTTGAACAAGTTATGTTATGCT TCTAAATCAAGTTTACCATGCATAGTCGCCACTGCTTACTGTGACTCTGCACTTTTGGAA CCGTACATTAACACAGGACTCAACGTCTATGACATTAGAGGGCCCTGTGAAGATAATAGT ACTGATGGTATGTGTTATACAGGTCTCCGCTATGTCGACCAGTATATGAATTTTCCTGAA GTTCAAGAAACGCTAGGGTCCGACGTGCATAATTATTCTGGCTGTGATAATGACGTGTTC ACCGGATTTTTGTTTACGGGCGATGGAAGTAAACCATTTCAACAATATATTGCTGAATTA TTAAATCACAACATTCCGGTATTAATATATGCGGGTGATAAGGATTATATTTGTAATTGG CTGGGAAACCATGCTTGGTCCAATGAGTTGGAATGGATCAATAAACGTAGGTATCAGAGA AGGATGTTAAGACCATGGGTCAGTAAAGAAACAGGTGAAGAGTTGGGACAAGTCAAGAAC TATGGCCCTTTCACCTTTTTGAGAATATACGATGCCGGTCATATGGTGCCCTATGATCAA CCGGAGGCAAGTTTGGAAATGGTCAACAGTTGGATTTCCGGTAATCGTGCTTTTTCGGAT CTTTCCACCTTGGAAAATGCTAGTTAG
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  • Fasta :-

    MKYLNLVFVLQLLISIKYASFGRAFSLFEDDTTFANLDKQLKLPQNTQQTLKLDRLNHDD PLFTTFISSVDTDYSLRLRTVDPSKLGIDTVKQWSGYMDYKDSKHFFYWFFESRNDPAND PIILWLNGGPGCSSFTGLLFELGPSSIGADMKPIHNPYSWNNNASMIFLEQPLGVGFSYG DEKVSSTKLAGKDAYIFLELFFEAFPHLRSNDFHIAGESYAGHYIPQIAHEIVVKNPERT FNLTSVMIGNGITDPLIQADYYEPMACGKGGYHPVLSSEECEKMSKAAGRCRRLNKLCYA SKSSLPCIVATAYCDSALLEPYINTGLNVYDIRGPCEDNSTDGMCYTGLRYVDQYMNFPE VQETLGSDVHNYSGCDNDVFTGFLFTGDGSKPFQQYIAELLNHNIPVLIYAGDKDYICNW LGNHAWSNELEWINKRRYQRRMLRPWVSKETGEELGQVKNYGPFTFLRIYDAGHMVPYDQ PEASLEMVNSWISGNRAFSDLSTLENAS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
YBR139W26 SGRAFSLFED0.992unspYBR139W373 SVHNYSGCDN0.993unsp

YBR139W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India