YCL057W | metalloendopeptidase

_IDPredictionOTHERSPmTPCS_Position
YCL057WmTP0.0452720.0193440.935384CS pos: 25-26. SLY-SM. Pr: 0.5771
No Results

  • Fasta :-

    >YCL057W MRLLLCKNWFASPVISPLLYTRSLYSMANTTSFPIAPQAPPNWSFTPSDISGKTNEIINN SNNFYDSMSKVESPSVSNFVEPFMKFENELGPIINQLTFLQHVSSDKEIRDASVNSSMKL DELNIDLSLRHDIFLQFARVWQDVQSKADSVERETFKYVEKSYKDYIHSGLELDEGNRLK IKEIKKKISVNSINFSKNLGEQKEYITFTKEQLEGVPDSILTQFETIKSDKDSNETLYKV TFKYPDIFPVMKLASSAQTRKQAFLADQNKVPENEAILLDTLKLRDELASLLGYDTYANY NLYDKMAEDSTTVMNFLNDLKDKLIPLGRKELQVLQDMKAEDVKKLNQGADPNYYIWDHR YYDNKYLLENFNVDLEKISEYFPLEATITGMLEIYETLFNLKFIETKDSQNKSVWHDDVK QIAVWNMDDPKSPNFVGWIYFDLHPRDGKYGHAANFGLSSSFMIDDTTRSYPVTALVCNF SKSTKDKPSLLKHNEIVTFFHELGHGIHDLVGQNKESRFNGPGSVPWDFVEAPSQMLEFW TWNKNELINLSSHYKTGEKIPESLINSLIKTKHVNGALFTLRQLHFGLFDMKVHTCKDLQ NLSICDTWNQLRQDISLISNGGTLSKGYDSFGHIMSDSYSAGYYGYLWAEVFATDMYHTK FAKDPLNAKNGIQYRDIVLARGGLYDINDNLKEFLGREPSKDAFLKELGLQN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YCL057W.fa Sequence name : YCL057W Sequence length : 712 VALUES OF COMPUTED PARAMETERS Coef20 : 4.433 CoefTot : -0.405 ChDiff : -18 ZoneTo : 48 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.947 1.276 0.018 0.501 MesoH : -0.362 -0.057 -0.421 0.150 MuHd_075 : 35.492 28.886 10.338 9.954 MuHd_095 : 23.630 20.493 6.798 5.999 MuHd_100 : 20.951 15.342 5.505 4.881 MuHd_105 : 20.256 13.068 4.311 4.557 Hmax_075 : 19.717 21.233 3.068 7.828 Hmax_095 : 13.912 12.338 2.193 4.440 Hmax_100 : 12.600 18.000 1.540 4.090 Hmax_105 : 13.100 11.025 1.527 5.190 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2155 0.7845 DFMC : 0.2179 0.7821 This protein is probably imported in chloroplast. f(Ser) = 0.1458 f(Arg) = 0.0417 CMi = 1.13636 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 712 YCL057W MRLLLCKNWFASPVISPLLYTRSLYSMANTTSFPIAPQAPPNWSFTPSDISGKTNEIINNSNNFYDSMSKVESPSVSNFV 80 EPFMKFENELGPIINQLTFLQHVSSDKEIRDASVNSSMKLDELNIDLSLRHDIFLQFARVWQDVQSKADSVERETFKYVE 160 KSYKDYIHSGLELDEGNRLKIKEIKKKISVNSINFSKNLGEQKEYITFTKEQLEGVPDSILTQFETIKSDKDSNETLYKV 240 TFKYPDIFPVMKLASSAQTRKQAFLADQNKVPENEAILLDTLKLRDELASLLGYDTYANYNLYDKMAEDSTTVMNFLNDL 320 KDKLIPLGRKELQVLQDMKAEDVKKLNQGADPNYYIWDHRYYDNKYLLENFNVDLEKISEYFPLEATITGMLEIYETLFN 400 LKFIETKDSQNKSVWHDDVKQIAVWNMDDPKSPNFVGWIYFDLHPRDGKYGHAANFGLSSSFMIDDTTRSYPVTALVCNF 480 SKSTKDKPSLLKHNEIVTFFHELGHGIHDLVGQNKESRFNGPGSVPWDFVEAPSQMLEFWTWNKNELINLSSHYKTGEKI 560 PESLINSLIKTKHVNGALFTLRQLHFGLFDMKVHTCKDLQNLSICDTWNQLRQDISLISNGGTLSKGYDSFGHIMSDSYS 640 AGYYGYLWAEVFATDMYHTKFAKDPLNAKNGIQYRDIVLARGGLYDINDNLKEFLGREPSKDAFLKELGLQN 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ........................................................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YCL057W 2 -----MR|LL 0.079 . YCL057W 7 MRLLLCK|NW 0.067 . YCL057W 22 SPLLYTR|SL 0.115 . YCL057W 53 PSDISGK|TN 0.068 . YCL057W 70 FYDSMSK|VE 0.056 . YCL057W 85 FVEPFMK|FE 0.065 . YCL057W 107 QHVSSDK|EI 0.066 . YCL057W 110 SSDKEIR|DA 0.159 . YCL057W 119 SVNSSMK|LD 0.064 . YCL057W 130 NIDLSLR|HD 0.077 . YCL057W 139 IFLQFAR|VW 0.098 . YCL057W 147 WQDVQSK|AD 0.074 . YCL057W 153 KADSVER|ET 0.092 . YCL057W 157 VERETFK|YV 0.102 . YCL057W 161 TFKYVEK|SY 0.103 . YCL057W 164 YVEKSYK|DY 0.080 . YCL057W 178 ELDEGNR|LK 0.065 . YCL057W 180 DEGNRLK|IK 0.066 . YCL057W 182 GNRLKIK|EI 0.077 . YCL057W 185 LKIKEIK|KK 0.065 . YCL057W 186 KIKEIKK|KI 0.093 . YCL057W 187 IKEIKKK|IS 0.113 . YCL057W 197 NSINFSK|NL 0.074 . YCL057W 203 KNLGEQK|EY 0.061 . YCL057W 210 EYITFTK|EQ 0.063 . YCL057W 228 TQFETIK|SD 0.090 . YCL057W 231 ETIKSDK|DS 0.070 . YCL057W 239 SNETLYK|VT 0.070 . YCL057W 243 LYKVTFK|YP 0.071 . YCL057W 252 DIFPVMK|LA 0.074 . YCL057W 260 ASSAQTR|KQ 0.095 . YCL057W 261 SSAQTRK|QA 0.102 . YCL057W 270 FLADQNK|VP 0.059 . YCL057W 283 ILLDTLK|LR 0.054 . YCL057W 285 LDTLKLR|DE 0.095 . YCL057W 305 NYNLYDK|MA 0.078 . YCL057W 321 NFLNDLK|DK 0.055 . YCL057W 323 LNDLKDK|LI 0.067 . YCL057W 329 KLIPLGR|KE 0.091 . YCL057W 330 LIPLGRK|EL 0.072 . YCL057W 339 QVLQDMK|AE 0.059 . YCL057W 344 MKAEDVK|KL 0.071 . YCL057W 345 KAEDVKK|LN 0.098 . YCL057W 360 YYIWDHR|YY 0.093 . YCL057W 365 HRYYDNK|YL 0.073 . YCL057W 377 FNVDLEK|IS 0.061 . YCL057W 402 ETLFNLK|FI 0.069 . YCL057W 407 LKFIETK|DS 0.071 . YCL057W 412 TKDSQNK|SV 0.098 . YCL057W 420 VWHDDVK|QI 0.066 . YCL057W 431 WNMDDPK|SP 0.080 . YCL057W 446 YFDLHPR|DG 0.085 . YCL057W 449 LHPRDGK|YG 0.146 . YCL057W 469 MIDDTTR|SY 0.089 . YCL057W 482 LVCNFSK|ST 0.084 . YCL057W 485 NFSKSTK|DK 0.078 . YCL057W 487 SKSTKDK|PS 0.080 . YCL057W 492 DKPSLLK|HN 0.066 . YCL057W 515 DLVGQNK|ES 0.065 . YCL057W 518 GQNKESR|FN 0.141 . YCL057W 544 EFWTWNK|NE 0.055 . YCL057W 555 NLSSHYK|TG 0.081 . YCL057W 559 HYKTGEK|IP 0.057 . YCL057W 570 LINSLIK|TK 0.069 . YCL057W 572 NSLIKTK|HV 0.100 . YCL057W 582 GALFTLR|QL 0.116 . YCL057W 592 FGLFDMK|VH 0.053 . YCL057W 597 MKVHTCK|DL 0.072 . YCL057W 612 DTWNQLR|QD 0.076 . YCL057W 626 NGGTLSK|GY 0.070 . YCL057W 660 TDMYHTK|FA 0.097 . YCL057W 663 YHTKFAK|DP 0.069 . YCL057W 669 KDPLNAK|NG 0.060 . YCL057W 675 KNGIQYR|DI 0.139 . YCL057W 681 RDIVLAR|GG 0.085 . YCL057W 692 DINDNLK|EF 0.061 . YCL057W 697 LKEFLGR|EP 0.089 . YCL057W 701 LGREPSK|DA 0.096 . YCL057W 706 SKDAFLK|EL 0.076 . ____________________________^_________________

  • Fasta :-

    >YCL057W ATGCGATTGTTGCTGTGCAAGAATTGGTTTGCGTCACCTGTAATCTCACCACTACTGTAT ACCCGCTCCTTATATTCAATGGCTAACACTACTAGTTTCCCTATTGCTCCCCAGGCCCCG CCTAATTGGTCGTTCACTCCCAGCGATATTAGTGGGAAAACCAACGAAATCATCAACAAC AGCAACAATTTCTATGATTCTATGAGTAAGGTAGAGAGCCCTTCCGTGAGTAATTTTGTG GAGCCTTTCATGAAGTTTGAAAATGAATTGGGCCCAATAATTAACCAATTAACTTTCTTA CAGCATGTGTCGTCTGATAAAGAAATTAGGGACGCATCTGTGAACTCCTCAATGAAACTG GATGAGTTGAACATCGATCTATCTCTGCGTCACGACATCTTTTTGCAATTCGCCCGCGTC TGGCAGGATGTTCAATCGAAGGCAGATTCTGTGGAAAGAGAAACTTTCAAATACGTTGAG AAGTCTTACAAGGACTACATTCATTCTGGTTTGGAACTTGACGAGGGAAACCGATTGAAA ATCAAAGAGATCAAAAAGAAGATCTCCGTTAACTCTATTAATTTTTCGAAGAATCTGGGA GAACAAAAGGAATACATCACTTTCACCAAAGAACAATTGGAAGGTGTGCCGGATTCTATT TTGACGCAGTTCGAGACAATAAAATCTGACAAAGATAGCAATGAAACCTTGTATAAAGTC ACCTTCAAATATCCGGACATTTTTCCCGTGATGAAATTGGCATCCTCAGCTCAGACTAGA AAGCAGGCCTTTTTGGCCGACCAAAATAAGGTCCCTGAAAATGAAGCTATACTGTTGGAT ACATTGAAGCTGCGTGACGAATTGGCCTCGTTATTGGGCTATGACACGTATGCGAACTAC AACCTGTATGATAAAATGGCTGAAGATAGCACTACGGTAATGAACTTTTTGAATGATTTG AAGGACAAGCTAATTCCGCTGGGCAGAAAGGAACTACAGGTCTTGCAAGATATGAAAGCC GAAGATGTTAAGAAACTTAACCAGGGTGCAGATCCAAACTACTACATTTGGGACCACCGT TACTACGATAACAAATATTTGTTAGAAAACTTCAATGTGGACCTAGAAAAGATTTCTGAA TATTTTCCACTAGAGGCTACGATTACTGGTATGCTGGAAATATACGAAACATTGTTTAAT TTGAAGTTTATCGAGACGAAAGATTCTCAAAACAAATCTGTTTGGCATGACGACGTCAAA CAAATCGCCGTTTGGAATATGGATGATCCAAAGTCTCCAAACTTTGTTGGTTGGATTTAT TTCGATTTACATCCTCGTGATGGTAAATATGGCCACGCTGCCAATTTTGGTTTATCGTCA TCATTCATGATTGATGACACCACAAGATCGTATCCGGTTACTGCGTTGGTTTGCAATTTC TCCAAATCTACGAAGGATAAACCTTCTCTACTGAAGCATAACGAAATAGTGACCTTTTTC CATGAATTGGGCCATGGTATCCATGACCTGGTGGGACAAAACAAGGAATCGAGGTTTAAT GGCCCCGGATCTGTTCCATGGGATTTTGTGGAGGCACCTTCCCAAATGTTAGAATTTTGG ACTTGGAATAAGAATGAATTAATCAACCTCTCATCACATTACAAAACGGGCGAAAAAATT CCAGAATCTTTGATCAATTCATTGATCAAAACTAAACACGTAAATGGTGCTTTATTCACT CTAAGACAATTACATTTTGGGTTATTTGATATGAAAGTACATACTTGTAAAGACTTGCAA AACCTGTCAATTTGCGATACCTGGAACCAATTGAGACAGGATATTTCTTTGATTTCTAAT GGTGGTACGTTATCCAAGGGTTATGATTCATTTGGCCATATAATGTCAGACTCTTACTCT GCCGGTTATTACGGTTATCTATGGGCGGAAGTCTTTGCAACTGATATGTATCACACCAAA TTCGCTAAGGATCCGTTAAATGCCAAGAATGGGATACAATACCGTGATATTGTGTTGGCT CGTGGTGGCCTTTATGATATTAATGATAATCTGAAAGAATTTTTGGGTAGGGAACCTTCT AAGGATGCTTTCTTGAAGGAGCTGGGCTTACAGAACTAA
  • Download Fasta

  • Fasta :-

    MRLLLCKNWFASPVISPLLYTRSLYSMANTTSFPIAPQAPPNWSFTPSDISGKTNEIINN SNNFYDSMSKVESPSVSNFVEPFMKFENELGPIINQLTFLQHVSSDKEIRDASVNSSMKL DELNIDLSLRHDIFLQFARVWQDVQSKADSVERETFKYVEKSYKDYIHSGLELDEGNRLK IKEIKKKISVNSINFSKNLGEQKEYITFTKEQLEGVPDSILTQFETIKSDKDSNETLYKV TFKYPDIFPVMKLASSAQTRKQAFLADQNKVPENEAILLDTLKLRDELASLLGYDTYANY NLYDKMAEDSTTVMNFLNDLKDKLIPLGRKELQVLQDMKAEDVKKLNQGADPNYYIWDHR YYDNKYLLENFNVDLEKISEYFPLEATITGMLEIYETLFNLKFIETKDSQNKSVWHDDVK QIAVWNMDDPKSPNFVGWIYFDLHPRDGKYGHAANFGLSSSFMIDDTTRSYPVTALVCNF SKSTKDKPSLLKHNEIVTFFHELGHGIHDLVGQNKESRFNGPGSVPWDFVEAPSQMLEFW TWNKNELINLSSHYKTGEKIPESLINSLIKTKHVNGALFTLRQLHFGLFDMKVHTCKDLQ NLSICDTWNQLRQDISLISNGGTLSKGYDSFGHIMSDSYSAGYYGYLWAEVFATDMYHTK FAKDPLNAKNGIQYRDIVLARGGLYDINDNLKEFLGREPSKDAFLKELGLQN

    No Results
  • title: Zn binding site
  • coordinates: H501,H505,E531
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YCL057W105 SQHVSSDKEI0.996unspYCL057W105 SQHVSSDKEI0.996unspYCL057W105 SQHVSSDKEI0.996unspYCL057W150 SSKADSVERE0.996unspYCL057W162 SYVEKSYKDY0.998unspYCL057W229 SETIKSDKDS0.995unspYCL057W483 SNFSKSTKDK0.997unspYCL057W51 SPSDISGKTN0.994unspYCL057W69 SYDSMSKVES0.994unsp

YCL057W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India