YCR045C | Rrt12p

_IDPredictionOTHERSPmTPCS_Position
YCR045CSP0.0033540.9966140.000032CS pos: 17-18. AYA-EE. Pr: 0.9874
No Results

  • Fasta :-

    >YCR045C MKPQCILISLLVNLAYAEEYLVRFKNPTAFQQFTSNSNRSWRQFIDNKIEKKFSIGSFRG VTMNLSKNLVNKLKKSPLVADIVPNFRFEAFEGDSVNSAESSYTFNATAKYSYEDVEEEQ NITYQPDAPRHLARISRHYQLPFDVGDKDRYKSWFNYYYEHDYQGQDVNAYIMDTGIFAD HPEFEDRVIQGIDLTKEGFGDQNGHGTHVAGLVGSKTYGAAKRVNLVEVKVLGKDGSGEA SNVLSGLEFIVEHCTKVSRPQGKKCVANLSLGSFRSPIINMAVEGAIEEGIVFVAAAGNF NLDAYWASPASAENVITVGAFDDHIDTIAKFSNWGPCVNIFAPGVEIESLSHLNYNDTLI LSGTSMSTPIVTGVAAILLSKGIEPEMIAQEIEYLSTRNVFHRRTLFFKPSTPNQILYNG VDKLDDPYDDETFPRLNIEAIAKELEEYNATLQTPMSENLQSGSKLWGWNNDVTLPLGEI RLKRRDFMKNL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YCR045C.fa Sequence name : YCR045C Sequence length : 491 VALUES OF COMPUTED PARAMETERS Coef20 : 3.792 CoefTot : 0.070 ChDiff : -15 ZoneTo : 17 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.776 1.535 0.275 0.585 MesoH : 0.088 0.566 -0.219 0.362 MuHd_075 : 20.820 17.160 7.022 4.259 MuHd_095 : 10.823 6.086 3.365 2.491 MuHd_100 : 7.447 7.724 2.440 2.628 MuHd_105 : 7.784 9.501 1.495 2.756 Hmax_075 : 18.317 21.350 5.164 6.008 Hmax_095 : 8.700 14.350 1.701 5.075 Hmax_100 : 12.600 15.200 3.396 4.700 Hmax_105 : 8.500 12.600 0.786 4.660 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9563 0.0437 DFMC : 0.8779 0.1221
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 491 YCR045C MKPQCILISLLVNLAYAEEYLVRFKNPTAFQQFTSNSNRSWRQFIDNKIEKKFSIGSFRGVTMNLSKNLVNKLKKSPLVA 80 DIVPNFRFEAFEGDSVNSAESSYTFNATAKYSYEDVEEEQNITYQPDAPRHLARISRHYQLPFDVGDKDRYKSWFNYYYE 160 HDYQGQDVNAYIMDTGIFADHPEFEDRVIQGIDLTKEGFGDQNGHGTHVAGLVGSKTYGAAKRVNLVEVKVLGKDGSGEA 240 SNVLSGLEFIVEHCTKVSRPQGKKCVANLSLGSFRSPIINMAVEGAIEEGIVFVAAAGNFNLDAYWASPASAENVITVGA 320 FDDHIDTIAKFSNWGPCVNIFAPGVEIESLSHLNYNDTLILSGTSMSTPIVTGVAAILLSKGIEPEMIAQEIEYLSTRNV 400 FHRRTLFFKPSTPNQILYNGVDKLDDPYDDETFPRLNIEAIAKELEEYNATLQTPMSENLQSGSKLWGWNNDVTLPLGEI 480 RLKRRDFMKNL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ........... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YCR045C 2 -----MK|PQ 0.063 . YCR045C 23 AEEYLVR|FK 0.096 . YCR045C 25 EYLVRFK|NP 0.056 . YCR045C 39 FTSNSNR|SW 0.225 . YCR045C 42 NSNRSWR|QF 0.400 . YCR045C 48 RQFIDNK|IE 0.055 . YCR045C 51 IDNKIEK|KF 0.070 . YCR045C 52 DNKIEKK|FS 0.133 . YCR045C 59 FSIGSFR|GV 0.159 . YCR045C 67 VTMNLSK|NL 0.061 . YCR045C 72 SKNLVNK|LK 0.067 . YCR045C 74 NLVNKLK|KS 0.062 . YCR045C 75 LVNKLKK|SP 0.117 . YCR045C 87 DIVPNFR|FE 0.080 . YCR045C 110 TFNATAK|YS 0.078 . YCR045C 130 YQPDAPR|HL 0.086 . YCR045C 134 APRHLAR|IS 0.147 . YCR045C 137 HLARISR|HY 0.213 . YCR045C 148 PFDVGDK|DR 0.058 . YCR045C 150 DVGDKDR|YK 0.100 . YCR045C 152 GDKDRYK|SW 0.084 . YCR045C 187 HPEFEDR|VI 0.109 . YCR045C 196 QGIDLTK|EG 0.061 . YCR045C 216 AGLVGSK|TY 0.064 . YCR045C 222 KTYGAAK|RV 0.078 . YCR045C 223 TYGAAKR|VN 0.147 . YCR045C 230 VNLVEVK|VL 0.067 . YCR045C 234 EVKVLGK|DG 0.067 . YCR045C 256 IVEHCTK|VS 0.064 . YCR045C 259 HCTKVSR|PQ 0.096 . YCR045C 263 VSRPQGK|KC 0.074 . YCR045C 264 SRPQGKK|CV 0.104 . YCR045C 275 LSLGSFR|SP 0.117 . YCR045C 330 HIDTIAK|FS 0.066 . YCR045C 381 AAILLSK|GI 0.070 . YCR045C 398 IEYLSTR|NV 0.110 . YCR045C 403 TRNVFHR|RT 0.122 . YCR045C 404 RNVFHRR|TL 0.169 . YCR045C 409 RRTLFFK|PS 0.074 . YCR045C 423 LYNGVDK|LD 0.067 . YCR045C 435 DDETFPR|LN 0.093 . YCR045C 443 NIEAIAK|EL 0.070 . YCR045C 465 NLQSGSK|LW 0.064 . YCR045C 481 LPLGEIR|LK 0.074 . YCR045C 483 LGEIRLK|RR 0.055 . YCR045C 484 GEIRLKR|RD 0.399 . YCR045C 485 EIRLKRR|DF 0.265 . YCR045C 489 KRRDFMK|NL 0.088 . ____________________________^_________________

  • Fasta :-

    >YCR045C ATGAAGCCACAGTGCATACTCATCTCTTTGCTGGTCAACCTCGCATACGCAGAGGAGTAT TTGGTGAGGTTCAAAAATCCCACAGCATTCCAACAATTCACTTCGAATTCCAACAGGTCA TGGAGACAGTTCATCGACAACAAAATTGAGAAGAAATTCTCCATCGGATCCTTCCGCGGC GTGACCATGAACCTGTCCAAGAACTTAGTGAACAAGCTGAAGAAAAGCCCACTGGTGGCT GATATTGTGCCCAACTTCAGGTTCGAAGCTTTTGAAGGCGACAGTGTAAATAGCGCCGAG TCGAGTTATACGTTTAACGCTACCGCCAAATACTCGTACGAAGACGTCGAGGAAGAGCAA AATATAACGTATCAACCAGACGCACCCCGTCACTTGGCCCGGATTTCCCGCCACTACCAA CTCCCATTCGACGTTGGGGACAAGGACCGCTACAAAAGCTGGTTCAATTACTACTATGAA CACGACTATCAAGGTCAAGACGTCAACGCCTATATCATGGATACGGGTATCTTCGCGGAC CATCCGGAATTCGAAGACAGAGTCATCCAGGGGATTGACTTGACCAAAGAAGGGTTTGGC GACCAGAATGGCCACGGAACGCACGTGGCGGGACTCGTAGGTTCCAAAACGTATGGAGCG GCAAAGAGGGTCAATCTTGTGGAGGTCAAAGTCTTGGGCAAAGACGGGTCTGGCGAGGCC AGTAACGTTCTTAGTGGTCTGGAGTTCATCGTGGAACATTGCACAAAGGTCAGTCGCCCA CAGGGTAAAAAATGCGTGGCCAATCTAAGTCTAGGGAGTTTCAGGAGCCCCATAATCAAC ATGGCAGTGGAGGGGGCCATTGAAGAAGGTATTGTATTTGTTGCCGCGGCGGGGAACTTC AATTTAGACGCCTACTGGGCCTCACCTGCGTCTGCAGAAAACGTTATCACCGTAGGGGCC TTTGATGACCACATTGACACGATTGCCAAGTTCAGCAATTGGGGGCCCTGTGTAAACATC TTTGCCCCAGGCGTGGAAATTGAGTCGCTATCTCATCTGAACTACAACGACACTTTAATT TTGTCAGGTACATCTATGTCGACGCCCATTGTCACCGGAGTTGCAGCGATCCTACTCTCG AAGGGAATTGAGCCTGAAATGATAGCACAGGAGATTGAGTATTTGTCCACGCGTAATGTT TTCCATAGAAGAACGTTGTTTTTCAAGCCTTCTACGCCAAACCAGATTCTTTACAACGGC GTCGATAAACTGGACGATCCATATGACGACGAAACGTTCCCTCGATTGAACATAGAGGCA ATTGCTAAGGAACTGGAGGAGTACAATGCCACTTTACAAACTCCTATGTCTGAGAATCTT CAATCTGGTTCAAAACTGTGGGGTTGGAATAACGATGTCACACTACCTCTTGGTGAGATT CGATTGAAGAGGCGTGATTTTATGAAAAATTTGTAG
  • Download Fasta

  • Fasta :-

    MKPQCILISLLVNLAYAEEYLVRFKNPTAFQQFTSNSNRSWRQFIDNKIEKKFSIGSFRG VTMNLSKNLVNKLKKSPLVADIVPNFRFEAFEGDSVNSAESSYTFNATAKYSYEDVEEEQ NITYQPDAPRHLARISRHYQLPFDVGDKDRYKSWFNYYYEHDYQGQDVNAYIMDTGIFAD HPEFEDRVIQGIDLTKEGFGDQNGHGTHVAGLVGSKTYGAAKRVNLVEVKVLGKDGSGEA SNVLSGLEFIVEHCTKVSRPQGKKCVANLSLGSFRSPIINMAVEGAIEEGIVFVAAAGNF NLDAYWASPASAENVITVGAFDDHIDTIAKFSNWGPCVNIFAPGVEIESLSHLNYNDTLI LSGTSMSTPIVTGVAAILLSKGIEPEMIAQEIEYLSTRNVFHRRTLFFKPSTPNQILYNG VDKLDDPYDDETFPRLNIEAIAKELEEYNATLQTPMSENLQSGSKLWGWNNDVTLPLGEI RLKRRDFMKNL

  • title: active site
  • coordinates: D174,H205,L271,G272,N299,S362,S365
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
YCR045C112 STAKYSYEDV0.996unspYCR045C153 SDRYKSWFNY0.992unsp

YCR045C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India