YDL117W | Cyk3p

_IDPredictionOTHERSPmTPCS_Position
YDL117WOTHER0.9992310.0000150.000754
No Results

  • Fasta :-

    >YDL117W MATNLTSLKPPFKVKARYGWSGQTKGDLGFLEGDIMEVTRIAGSWFYGKLLRNKKCSGYF PHNFVILLEERLNSSTENGRQPSKIVESFEKSNKVVIPPVPSRYSDERPRPKKKLSSSMP NSPKKPVDSLTKARKAKSKEMVNEKNIYNTQSSRHHNNSAPNLPLASHSKPQVRNFEESM NNPLPPLPPLPDLDNMRKTDKRAPKKSYSANDLHMARSSREYNYYKDNQKFYDGFIPEKR YSLEEDSISSGLFSNSQYLNDSACSSENSFALMSDFSATSAGSFARHKYAQSFSDSLQRS QNANGCSTKINDSQEFGDSNASSRNGKMGDILRKIIIPKRNTNIYSSSVSSPKSPKAYPK LPDIQNLNLSATPDEARDWIAVKCHLNRARTLTKYDKHPRYMRALEENRDLILHPQDSIY NGLNTNEVKGNTKPGLVDVELAELNIEYIDKMTWKRCIRDGTMTLDSWAQTTFSARYSTV LEKLRGIYIFCTEMFALTDDNGTSDFSAEPQNLEKILYRKHCTPYELTWLFKKLANSLGI TCEIVIGFLKTPSAINWEFKYNHCWLRILVNKEWRFIDVILGNVTNPIHEFVNNRKIKKA ENSYFLMAPLEMIYTHIPPREFEQHIVPSIDQLSALYLPLVFPSFFKNELKLYKFSTALS FLEDSEIYECSLEIPNDVEVFASVVIPTDNEEASSAYRNMELALTQIKKQKAESGRRIAL IKAVLPPNVNKGSLYIHSGVRGTQTSIANIHPLSMMVPLTHKGSNMKYEFVIKIPSESIQ KIELYIVEPQSRYLFVGNEYSFEVIQSPSDGIVYSSDEGPNQNRKQPMAIKSPSGRVHEL VKSDPHFPYGTWKGSIKIKEPGVWSALVIADSGIGWSVFAEWLCV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YDL117W.fa Sequence name : YDL117W Sequence length : 885 VALUES OF COMPUTED PARAMETERS Coef20 : 3.957 CoefTot : -1.269 ChDiff : 18 ZoneTo : 26 KR : 5 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.300 1.418 0.110 0.634 MesoH : -0.557 0.363 -0.408 0.258 MuHd_075 : 19.574 6.466 5.063 2.884 MuHd_095 : 24.672 10.955 6.616 5.822 MuHd_100 : 18.187 12.615 6.294 5.250 MuHd_105 : 16.676 13.993 6.208 5.221 Hmax_075 : 1.167 4.317 -1.367 2.940 Hmax_095 : -0.613 7.000 -3.243 1.732 Hmax_100 : 5.000 12.000 -0.645 3.810 Hmax_105 : -1.167 6.533 0.314 2.322 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5297 0.4703 DFMC : 0.5006 0.4994
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 885 YDL117W MATNLTSLKPPFKVKARYGWSGQTKGDLGFLEGDIMEVTRIAGSWFYGKLLRNKKCSGYFPHNFVILLEERLNSSTENGR 80 QPSKIVESFEKSNKVVIPPVPSRYSDERPRPKKKLSSSMPNSPKKPVDSLTKARKAKSKEMVNEKNIYNTQSSRHHNNSA 160 PNLPLASHSKPQVRNFEESMNNPLPPLPPLPDLDNMRKTDKRAPKKSYSANDLHMARSSREYNYYKDNQKFYDGFIPEKR 240 YSLEEDSISSGLFSNSQYLNDSACSSENSFALMSDFSATSAGSFARHKYAQSFSDSLQRSQNANGCSTKINDSQEFGDSN 320 ASSRNGKMGDILRKIIIPKRNTNIYSSSVSSPKSPKAYPKLPDIQNLNLSATPDEARDWIAVKCHLNRARTLTKYDKHPR 400 YMRALEENRDLILHPQDSIYNGLNTNEVKGNTKPGLVDVELAELNIEYIDKMTWKRCIRDGTMTLDSWAQTTFSARYSTV 480 LEKLRGIYIFCTEMFALTDDNGTSDFSAEPQNLEKILYRKHCTPYELTWLFKKLANSLGITCEIVIGFLKTPSAINWEFK 560 YNHCWLRILVNKEWRFIDVILGNVTNPIHEFVNNRKIKKAENSYFLMAPLEMIYTHIPPREFEQHIVPSIDQLSALYLPL 640 VFPSFFKNELKLYKFSTALSFLEDSEIYECSLEIPNDVEVFASVVIPTDNEEASSAYRNMELALTQIKKQKAESGRRIAL 720 IKAVLPPNVNKGSLYIHSGVRGTQTSIANIHPLSMMVPLTHKGSNMKYEFVIKIPSESIQKIELYIVEPQSRYLFVGNEY 800 SFEVIQSPSDGIVYSSDEGPNQNRKQPMAIKSPSGRVHELVKSDPHFPYGTWKGSIKIKEPGVWSALVIADSGIGWSVFA 880 EWLCV 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ..... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YDL117W 9 TNLTSLK|PP 0.060 . YDL117W 13 SLKPPFK|VK 0.063 . YDL117W 15 KPPFKVK|AR 0.067 . YDL117W 17 PFKVKAR|YG 0.121 . YDL117W 25 GWSGQTK|GD 0.078 . YDL117W 40 DIMEVTR|IA 0.124 . YDL117W 49 GSWFYGK|LL 0.065 . YDL117W 52 FYGKLLR|NK 0.071 . YDL117W 54 GKLLRNK|KC 0.070 . YDL117W 55 KLLRNKK|CS 0.304 . YDL117W 71 VILLEER|LN 0.074 . YDL117W 80 SSTENGR|QP 0.101 . YDL117W 84 NGRQPSK|IV 0.084 . YDL117W 91 IVESFEK|SN 0.081 . YDL117W 94 SFEKSNK|VV 0.073 . YDL117W 103 IPPVPSR|YS 0.098 . YDL117W 108 SRYSDER|PR 0.092 . YDL117W 110 YSDERPR|PK 0.078 . YDL117W 112 DERPRPK|KK 0.057 . YDL117W 113 ERPRPKK|KL 0.395 . YDL117W 114 RPRPKKK|LS 0.163 . YDL117W 124 SMPNSPK|KP 0.065 . YDL117W 125 MPNSPKK|PV 0.224 . YDL117W 132 PVDSLTK|AR 0.056 . YDL117W 134 DSLTKAR|KA 0.121 . YDL117W 135 SLTKARK|AK 0.105 . YDL117W 137 TKARKAK|SK 0.498 . YDL117W 139 ARKAKSK|EM 0.071 . YDL117W 145 KEMVNEK|NI 0.067 . YDL117W 154 YNTQSSR|HH 0.080 . YDL117W 170 PLASHSK|PQ 0.062 . YDL117W 174 HSKPQVR|NF 0.132 . YDL117W 197 PDLDNMR|KT 0.082 . YDL117W 198 DLDNMRK|TD 0.068 . YDL117W 201 NMRKTDK|RA 0.065 . YDL117W 202 MRKTDKR|AP 0.222 . YDL117W 205 TDKRAPK|KS 0.161 . YDL117W 206 DKRAPKK|SY 0.212 . YDL117W 217 NDLHMAR|SS 0.114 . YDL117W 220 HMARSSR|EY 0.259 . YDL117W 226 REYNYYK|DN 0.080 . YDL117W 230 YYKDNQK|FY 0.069 . YDL117W 239 DGFIPEK|RY 0.067 . YDL117W 240 GFIPEKR|YS 0.163 . YDL117W 286 SAGSFAR|HK 0.142 . YDL117W 288 GSFARHK|YA 0.072 . YDL117W 299 FSDSLQR|SQ 0.115 . YDL117W 309 ANGCSTK|IN 0.082 . YDL117W 324 DSNASSR|NG 0.085 . YDL117W 327 ASSRNGK|MG 0.206 . YDL117W 333 KMGDILR|KI 0.079 . YDL117W 334 MGDILRK|II 0.099 . YDL117W 339 RKIIIPK|RN 0.068 . YDL117W 340 KIIIPKR|NT 0.150 . YDL117W 353 SSVSSPK|SP 0.083 . YDL117W 356 SSPKSPK|AY 0.069 . YDL117W 360 SPKAYPK|LP 0.072 . YDL117W 377 ATPDEAR|DW 0.129 . YDL117W 383 RDWIAVK|CH 0.058 . YDL117W 388 VKCHLNR|AR 0.073 . YDL117W 390 CHLNRAR|TL 0.104 . YDL117W 394 RARTLTK|YD 0.066 . YDL117W 397 TLTKYDK|HP 0.061 . YDL117W 400 KYDKHPR|YM 0.116 . YDL117W 403 KHPRYMR|AL 0.326 . YDL117W 409 RALEENR|DL 0.083 . YDL117W 429 LNTNEVK|GN 0.064 . YDL117W 433 EVKGNTK|PG 0.055 . YDL117W 451 NIEYIDK|MT 0.059 . YDL117W 455 IDKMTWK|RC 0.069 . YDL117W 456 DKMTWKR|CI 0.348 . YDL117W 459 TWKRCIR|DG 0.295 . YDL117W 476 QTTFSAR|YS 0.102 . YDL117W 483 YSTVLEK|LR 0.064 . YDL117W 485 TVLEKLR|GI 0.090 . YDL117W 515 EPQNLEK|IL 0.066 . YDL117W 519 LEKILYR|KH 0.077 . YDL117W 520 EKILYRK|HC 0.094 . YDL117W 532 ELTWLFK|KL 0.064 . YDL117W 533 LTWLFKK|LA 0.093 . YDL117W 550 IVIGFLK|TP 0.062 . YDL117W 560 AINWEFK|YN 0.085 . YDL117W 567 YNHCWLR|IL 0.104 . YDL117W 572 LRILVNK|EW 0.069 . YDL117W 575 LVNKEWR|FI 0.167 . YDL117W 595 HEFVNNR|KI 0.127 . YDL117W 596 EFVNNRK|IK 0.075 . YDL117W 598 VNNRKIK|KA 0.299 . YDL117W 599 NNRKIKK|AE 0.104 . YDL117W 620 YTHIPPR|EF 0.114 . YDL117W 647 VFPSFFK|NE 0.052 . YDL117W 651 FFKNELK|LY 0.056 . YDL117W 654 NELKLYK|FS 0.061 . YDL117W 698 EASSAYR|NM 0.105 . YDL117W 708 LALTQIK|KQ 0.054 . YDL117W 709 ALTQIKK|QK 0.098 . YDL117W 711 TQIKKQK|AE 0.084 . YDL117W 716 QKAESGR|RI 0.093 . YDL117W 717 KAESGRR|IA 0.103 . YDL117W 722 RRIALIK|AV 0.080 . YDL117W 731 LPPNVNK|GS 0.067 . YDL117W 741 YIHSGVR|GT 0.097 . YDL117W 762 MVPLTHK|GS 0.060 . YDL117W 767 HKGSNMK|YE 0.066 . YDL117W 773 KYEFVIK|IP 0.064 . YDL117W 781 PSESIQK|IE 0.052 . YDL117W 792 IVEPQSR|YL 0.104 . YDL117W 824 EGPNQNR|KQ 0.078 . YDL117W 825 GPNQNRK|QP 0.090 . YDL117W 831 KQPMAIK|SP 0.080 . YDL117W 836 IKSPSGR|VH 0.111 . YDL117W 842 RVHELVK|SD 0.072 . YDL117W 853 FPYGTWK|GS 0.075 . YDL117W 857 TWKGSIK|IK 0.082 . YDL117W 859 KGSIKIK|EP 0.076 . ____________________________^_________________

  • Fasta :-

    >YDL117W ATGGCCACTAACTTAACATCTTTGAAGCCACCATTTAAGGTGAAGGCCAGGTATGGTTGG TCGGGCCAAACTAAAGGCGACTTAGGCTTTCTGGAGGGAGATATTATGGAAGTCACAAGG ATTGCCGGTTCTTGGTTCTACGGCAAGTTATTGAGAAACAAAAAATGTTCTGGGTATTTT CCTCATAACTTCGTCATACTATTAGAGGAGAGATTAAATTCGAGCACTGAAAATGGTAGG CAACCTTCAAAAATAGTAGAAAGTTTTGAAAAATCAAATAAAGTTGTTATTCCACCAGTA CCATCAAGGTATTCTGACGAGAGGCCAAGGCCTAAAAAGAAGCTATCTTCATCAATGCCC AATTCACCCAAGAAGCCGGTAGATTCTTTGACAAAGGCTAGAAAGGCAAAATCAAAAGAA ATGGTAAATGAAAAAAATATCTATAATACCCAATCCTCTCGACATCATAATAACTCAGCT CCAAATTTACCTTTGGCTAGCCATAGTAAGCCTCAAGTACGAAATTTCGAGGAGTCCATG AACAATCCGTTACCACCTCTACCGCCACTACCAGATTTGGACAATATGAGAAAGACAGAT AAAAGGGCACCAAAGAAATCATATTCTGCAAACGATTTACATATGGCACGTTCTTCAAGA GAATATAACTATTACAAAGACAACCAGAAATTCTATGATGGGTTTATCCCAGAAAAGAGA TATTCTTTAGAAGAGGACTCTATTTCATCAGGCCTGTTTTCAAACTCTCAGTACTTAAAT GATTCTGCTTGTAGTAGTGAGAACAGTTTTGCCTTAATGAGTGATTTTAGTGCCACGAGC GCGGGAAGTTTCGCCAGACATAAATATGCACAATCGTTTTCCGATTCATTGCAAAGATCA CAGAATGCAAATGGCTGCTCTACAAAGATAAATGATTCACAGGAGTTTGGTGATTCCAAT GCTAGTTCGAGAAATGGAAAAATGGGTGATATCCTTAGGAAAATAATTATTCCAAAGAGG AATACAAATATTTACTCCAGTTCAGTATCCTCACCAAAGTCACCAAAAGCATATCCTAAA CTACCAGATATTCAGAATTTAAACTTGTCTGCAACACCCGATGAAGCTCGCGATTGGATT GCGGTAAAATGTCACTTGAACAGAGCAAGGACTCTTACCAAATATGACAAACATCCGAGG TATATGAGAGCTCTCGAAGAAAATCGCGACTTGATCTTACATCCTCAAGATTCGATTTAT AACGGGCTAAATACCAATGAAGTCAAAGGTAATACAAAGCCCGGTTTGGTCGATGTGGAA CTGGCCGAATTAAACATAGAATACATTGATAAGATGACTTGGAAACGGTGTATTAGAGAC GGAACTATGACATTAGACAGTTGGGCTCAAACAACTTTTTCAGCAAGATACTCAACTGTT CTGGAAAAGTTAAGAGGCATATACATTTTTTGCACAGAGATGTTTGCTCTGACTGATGAT AATGGAACGTCAGATTTTTCTGCGGAACCCCAAAATTTAGAGAAAATACTATACAGAAAG CATTGTACGCCATATGAATTGACATGGCTTTTCAAGAAATTAGCAAACTCATTGGGAATC ACTTGTGAAATTGTTATAGGTTTCCTGAAAACACCGAGTGCTATAAATTGGGAGTTTAAG TATAACCACTGCTGGTTGAGAATACTGGTTAACAAAGAATGGAGATTTATTGACGTTATT TTAGGAAATGTAACCAACCCAATTCATGAATTTGTAAATAACAGAAAGATCAAGAAAGCA GAAAATAGCTACTTTTTGATGGCACCATTAGAAATGATATACACACATATACCGCCTAGG GAATTTGAGCAGCATATTGTTCCTAGTATCGATCAATTATCTGCATTGTATCTGCCATTA GTTTTTCCATCTTTTTTCAAAAATGAGTTAAAGTTATACAAATTTAGTACTGCACTATCA TTTTTGGAAGATTCTGAGATCTACGAATGCTCCTTAGAAATTCCCAATGACGTTGAAGTC TTTGCATCCGTGGTTATTCCAACGGATAATGAAGAAGCTTCATCTGCGTACAGGAATATG GAACTCGCACTGACCCAAATCAAAAAGCAGAAAGCCGAGTCTGGTAGAAGAATTGCTCTA ATCAAAGCAGTCCTACCACCCAATGTGAACAAAGGTTCACTGTACATACATTCAGGTGTA AGAGGTACGCAAACGAGTATTGCCAATATCCATCCACTGTCCATGATGGTCCCATTAACA CATAAGGGAAGTAACATGAAATACGAATTTGTGATCAAGATACCCTCAGAAAGCATTCAG AAGATTGAGCTATACATTGTCGAGCCACAGAGTAGATATCTATTTGTTGGTAATGAGTAC TCATTCGAAGTTATTCAAAGTCCCTCCGATGGTATTGTATACAGCAGTGATGAAGGGCCG AACCAAAATAGGAAACAACCAATGGCAATAAAATCACCCTCAGGAAGAGTTCATGAGCTA GTCAAGAGCGATCCCCACTTTCCTTATGGTACCTGGAAAGGAAGCATTAAAATCAAAGAG CCCGGCGTCTGGAGCGCTTTAGTGATCGCTGACTCTGGTATTGGGTGGTCCGTTTTTGCT GAATGGTTGTGCGTATAA
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  • Fasta :-

    MATNLTSLKPPFKVKARYGWSGQTKGDLGFLEGDIMEVTRIAGSWFYGKLLRNKKCSGYF PHNFVILLEERLNSSTENGRQPSKIVESFEKSNKVVIPPVPSRYSDERPRPKKKLSSSMP NSPKKPVDSLTKARKAKSKEMVNEKNIYNTQSSRHHNNSAPNLPLASHSKPQVRNFEESM NNPLPPLPPLPDLDNMRKTDKRAPKKSYSANDLHMARSSREYNYYKDNQKFYDGFIPEKR YSLEEDSISSGLFSNSQYLNDSACSSENSFALMSDFSATSAGSFARHKYAQSFSDSLQRS QNANGCSTKINDSQEFGDSNASSRNGKMGDILRKIIIPKRNTNIYSSSVSSPKSPKAYPK LPDIQNLNLSATPDEARDWIAVKCHLNRARTLTKYDKHPRYMRALEENRDLILHPQDSIY NGLNTNEVKGNTKPGLVDVELAELNIEYIDKMTWKRCIRDGTMTLDSWAQTTFSARYSTV LEKLRGIYIFCTEMFALTDDNGTSDFSAEPQNLEKILYRKHCTPYELTWLFKKLANSLGI TCEIVIGFLKTPSAINWEFKYNHCWLRILVNKEWRFIDVILGNVTNPIHEFVNNRKIKKA ENSYFLMAPLEMIYTHIPPREFEQHIVPSIDQLSALYLPLVFPSFFKNELKLYKFSTALS FLEDSEIYECSLEIPNDVEVFASVVIPTDNEEASSAYRNMELALTQIKKQKAESGRRIAL IKAVLPPNVNKGSLYIHSGVRGTQTSIANIHPLSMMVPLTHKGSNMKYEFVIKIPSESIQ KIELYIVEPQSRYLFVGNEYSFEVIQSPSDGIVYSSDEGPNQNRKQPMAIKSPSGRVHEL VKSDPHFPYGTWKGSIKIKEPGVWSALVIADSGIGWSVFAEWLCV

  • title: peptide ligand binding site
  • coordinates: Y18,W20,Q23,D27,S44,W45,P61,N63,F64
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YDL117W105 SPSRYSDERP0.997unspYDL117W105 SPSRYSDERP0.997unspYDL117W105 SPSRYSDERP0.997unspYDL117W122 SSMPNSPKKP0.996unspYDL117W207 SAPKKSYSAN0.991unspYDL117W242 SEKRYSLEED0.998unspYDL117W313 SKINDSQEFG0.996unspYDL117W322 SDSNASSRNG0.991unspYDL117W351 SSSVSSPKSP0.998unspYDL117W354 SSSPKSPKAY0.997unspYDL117W714 SQKAESGRRI0.996unspYDL117W807 SEVIQSPSDG0.994unspYDL117W74 SERLNSSTEN0.992unspYDL117W75 SRLNSSTENG0.993unsp

YDL117W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India