YDR177W | E2 ubiquitin-conjugating protein UBC1

_IDPredictionOTHERSPmTPCS_Position
YDR177WOTHER0.9999550.0000070.000038
No Results

  • Fasta :-

    >YDR177W MSRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPM EYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPND PQDAEVAQHYLRDRESFNKTAALWTRLYASETSNGQKGNVEESDLYGIDHDLIDEFESQG FEKDKIVEVLRRLGVKSLDPNDNNTANRIIEELLK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YDR177W.fa Sequence name : YDR177W Sequence length : 215 VALUES OF COMPUTED PARAMETERS Coef20 : 4.003 CoefTot : 0.297 ChDiff : -10 ZoneTo : 9 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.935 1.394 0.036 0.460 MesoH : -0.414 0.256 -0.388 0.242 MuHd_075 : 15.749 4.999 4.290 2.329 MuHd_095 : 24.913 15.299 6.898 4.875 MuHd_100 : 37.241 21.621 9.197 7.683 MuHd_105 : 44.773 26.521 10.815 9.881 Hmax_075 : 0.233 4.900 -2.399 1.867 Hmax_095 : -10.100 5.000 -3.266 0.810 Hmax_100 : 5.600 11.400 -0.381 3.780 Hmax_105 : 17.000 17.200 2.751 5.920 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8489 0.1511 DFMC : 0.8386 0.1614
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 215 YDR177W MSRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNI 80 SSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASETSNGQKGNV 160 EESDLYGIDHDLIDEFESQGFEKDKIVEVLRRLGVKSLDPNDNNTANRIIEELLK 240 .....P.......................................................................... 80 ................................................................................ 160 ....................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ YDR177W 3 ----MSR|AK 0.084 . YDR177W 5 --MSRAK|RI 0.074 . YDR177W 6 -MSRAKR|IM 0.685 *ProP* YDR177W 9 RAKRIMK|EI 0.167 . YDR177W 15 KEIQAVK|DD 0.065 . YDR177W 36 SDIHHLK|GT 0.082 . YDR177W 51 TPYEGGK|FV 0.123 . YDR177W 65 PMEYPFK|PP 0.066 . YDR177W 68 YPFKPPK|MQ 0.067 . YDR177W 74 KMQFDTK|VY 0.075 . YDR177W 93 ICLDILK|NA 0.056 . YDR177W 103 SPVITLK|SA 0.112 . YDR177W 132 VAQHYLR|DR 0.096 . YDR177W 134 QHYLRDR|ES 0.085 . YDR177W 139 DRESFNK|TA 0.062 . YDR177W 146 TAALWTR|LY 0.091 . YDR177W 157 ETSNGQK|GN 0.064 . YDR177W 183 ESQGFEK|DK 0.076 . YDR177W 185 QGFEKDK|IV 0.089 . YDR177W 191 KIVEVLR|RL 0.083 . YDR177W 192 IVEVLRR|LG 0.107 . YDR177W 196 LRRLGVK|SL 0.104 . YDR177W 208 DNNTANR|II 0.129 . YDR177W 215 IIEELLK|-- 0.060 . ____________________________^_________________

  • Fasta :-

    >YDR177W ATGTCTAGGGCTAAGAGAATTATGAAAGAAATCCAAGCTGTGAAGGATGATCCTGCAGCT CACATTACTCTTGAATTTGTGAGTGAATCTGATATCCACCATTTAAAAGGCACATTTTTG GGCCCACCTGGAACACCTTACGAGGGTGGCAAATTTGTCGTGGATATCGAAGTACCTATG GAGTATCCATTCAAACCACCAAAGATGCAGTTCGACACAAAAGTATACCATCCAAATATA TCATCAGTGACAGGTGCCATTTGTTTAGATATTCTTAAGAATGCATGGTCGCCAGTGATA ACACTAAAGTCTGCATTGATTTCGCTACAGGCGCTACTACAATCTCCAGAGCCTAACGAT CCTCAAGATGCAGAAGTAGCACAACACTATTTACGGGATAGAGAATCTTTTAATAAGACT GCTGCACTATGGACGAGGTTATACGCCAGTGAAACTTCCAATGGTCAAAAAGGCAATGTA GAGGAGTCTGATTTATATGGGATTGACCACGATCTGATTGACGAGTTTGAATCTCAAGGT TTTGAAAAGGACAAGATTGTGGAAGTGTTGAGACGATTAGGCGTCAAGTCCTTAGACCCC AATGACAACAACACAGCCAACCGTATCATCGAGGAATTGTTGAAGTGA
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  • Fasta :-

    MSRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPM EYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPND PQDAEVAQHYLRDRESFNKTAALWTRLYASETSNGQKGNVEESDLYGIDHDLIDEFESQG FEKDKIVEVLRRLGVKSLDPNDNNTANRIIEELLK

  • title: active site cysteine
  • coordinates: C88
No Results
No Results
No Results

YDR177W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India