YDR430C | Cym1p

_IDPredictionOTHERSPmTPCS_Position
YDR430CmTP0.0529400.0000880.946972CS pos: 7-8. QRF-AS. Pr: 0.3717
No Results

  • Fasta :-

    >YDR430C MLRFQRFASSYAQAQAVRKYPVGGIFHGYEVRRILPVPELRLTAVDLVHSQTGAEHLHID RDDKNNVFSIAFKTNPPDSTGVPHILEHTTLCGSVKYPVRDPFFKMLNKSLANFMNAMTG PDYTFFPFSTTNPQDFANLRGVYLDSTLNPLLKQEDFDQEGWRLEHKNITDPESNIVFKG VVYNEMKGQISNANYYFWSKFQQSIYPSLNNSGGDPMKITDLRYGDLLDFHHKNYHPSNA KTFTYGNLPLVDTLKQLNEQFSGYGKRARKDKLLMPIDLKKDIDVKLLGQIDTMLPPEKQ TKASMTWICGAPQDTYDTFLLKVLGNLLMDGHSSVMYQKLIESGIGLEFSVNSGVEPTTA VNLLTVGIQGVSDIEIFKDTVNNIFQNLLETEHPFDRKRIDAIIEQLELSKKDQKADFGL QLLYSILPGWTNKIDPFESLLFEDVLQRFRGDLETKGDTLFQDLIRKYIVHKPCFTFSIQ GSEEFSKSLDDEEQTRLREKITALDEQDKKNIFKRGILLQEKQNEKEDLSCLPTLQIKDI PRAGDKYSIEQKNNTMSRITDTNGITYVRGKRLLNDIIPFELFPYLPLFAESLTNLGTTT ESFSEIEDQIKLHTGGISTHVEVTSDPNTTEPRLIFGFDGWSLNSKTDHIFEFWSKILLE TDFHKNSDKLKVLIRLLASSNTSSVADAGHAFARGYSAAHYRSSGAINETLNGIEQLQFI NRLHSLLDNEETFQREVVDKLTELQKYIVDTNNMNFFITSDSDVQAKTVESQISKFMERL PHGSCLPNGPKTSDYPLIGSKCKHTLIKFPFQVHYTSQALLGVPYTHKDGSALQVMSNML TFKHLHREVREKGGAYGGGASYSALAGIFSFYSYRDPQPLKSLETFKNSGRYILNDAKWG VTDLDEAKLTIFQQVDAPKSPKGEGVTYFMSGVTDDMKQARREQLLDVSLLDVHRVAEKY LLNKEGVSTVIGPGIEGKTVSPNWEVKEL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YDR430C.fa Sequence name : YDR430C Sequence length : 989 VALUES OF COMPUTED PARAMETERS Coef20 : 4.683 CoefTot : -0.976 ChDiff : -16 ZoneTo : 29 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.418 1.206 0.179 0.611 MesoH : -0.105 0.461 -0.280 0.297 MuHd_075 : 24.116 22.337 7.499 6.835 MuHd_095 : 31.555 11.407 5.651 6.563 MuHd_100 : 21.645 6.249 3.413 4.431 MuHd_105 : 20.626 13.227 5.931 5.441 Hmax_075 : 14.467 15.000 2.219 5.380 Hmax_095 : 8.400 6.200 -0.545 3.670 Hmax_100 : 7.500 4.600 0.014 2.570 Hmax_105 : 11.300 6.767 0.886 4.320 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0237 0.9763 DFMC : 0.0514 0.9486 This protein is probably imported in mitochondria. f(Ser) = 0.0690 f(Arg) = 0.1034 CMi = 0.32103 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 989 YDR430C MLRFQRFASSYAQAQAVRKYPVGGIFHGYEVRRILPVPELRLTAVDLVHSQTGAEHLHIDRDDKNNVFSIAFKTNPPDST 80 GVPHILEHTTLCGSVKYPVRDPFFKMLNKSLANFMNAMTGPDYTFFPFSTTNPQDFANLRGVYLDSTLNPLLKQEDFDQE 160 GWRLEHKNITDPESNIVFKGVVYNEMKGQISNANYYFWSKFQQSIYPSLNNSGGDPMKITDLRYGDLLDFHHKNYHPSNA 240 KTFTYGNLPLVDTLKQLNEQFSGYGKRARKDKLLMPIDLKKDIDVKLLGQIDTMLPPEKQTKASMTWICGAPQDTYDTFL 320 LKVLGNLLMDGHSSVMYQKLIESGIGLEFSVNSGVEPTTAVNLLTVGIQGVSDIEIFKDTVNNIFQNLLETEHPFDRKRI 400 DAIIEQLELSKKDQKADFGLQLLYSILPGWTNKIDPFESLLFEDVLQRFRGDLETKGDTLFQDLIRKYIVHKPCFTFSIQ 480 GSEEFSKSLDDEEQTRLREKITALDEQDKKNIFKRGILLQEKQNEKEDLSCLPTLQIKDIPRAGDKYSIEQKNNTMSRIT 560 DTNGITYVRGKRLLNDIIPFELFPYLPLFAESLTNLGTTTESFSEIEDQIKLHTGGISTHVEVTSDPNTTEPRLIFGFDG 640 WSLNSKTDHIFEFWSKILLETDFHKNSDKLKVLIRLLASSNTSSVADAGHAFARGYSAAHYRSSGAINETLNGIEQLQFI 720 NRLHSLLDNEETFQREVVDKLTELQKYIVDTNNMNFFITSDSDVQAKTVESQISKFMERLPHGSCLPNGPKTSDYPLIGS 800 KCKHTLIKFPFQVHYTSQALLGVPYTHKDGSALQVMSNMLTFKHLHREVREKGGAYGGGASYSALAGIFSFYSYRDPQPL 880 KSLETFKNSGRYILNDAKWGVTDLDEAKLTIFQQVDAPKSPKGEGVTYFMSGVTDDMKQARREQLLDVSLLDVHRVAEKY 960 LLNKEGVSTVIGPGIEGKTVSPNWEVKEL 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ............................. 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YDR430C 3 ----MLR|FQ 0.076 . YDR430C 6 -MLRFQR|FA 0.344 . YDR430C 18 AQAQAVR|KY 0.084 . YDR430C 19 QAQAVRK|YP 0.106 . YDR430C 32 FHGYEVR|RI 0.079 . YDR430C 33 HGYEVRR|IL 0.122 . YDR430C 41 LPVPELR|LT 0.084 . YDR430C 61 EHLHIDR|DD 0.079 . YDR430C 64 HIDRDDK|NN 0.091 . YDR430C 73 VFSIAFK|TN 0.064 . YDR430C 96 TLCGSVK|YP 0.064 . YDR430C 100 SVKYPVR|DP 0.092 . YDR430C 105 VRDPFFK|ML 0.086 . YDR430C 109 FFKMLNK|SL 0.073 . YDR430C 140 QDFANLR|GV 0.087 . YDR430C 153 TLNPLLK|QE 0.068 . YDR430C 163 FDQEGWR|LE 0.086 . YDR430C 167 GWRLEHK|NI 0.073 . YDR430C 179 ESNIVFK|GV 0.103 . YDR430C 187 VVYNEMK|GQ 0.060 . YDR430C 200 NYYFWSK|FQ 0.065 . YDR430C 218 SGGDPMK|IT 0.067 . YDR430C 223 MKITDLR|YG 0.090 . YDR430C 233 LLDFHHK|NY 0.066 . YDR430C 241 YHPSNAK|TF 0.058 . YDR430C 255 PLVDTLK|QL 0.066 . YDR430C 266 QFSGYGK|RA 0.065 . YDR430C 267 FSGYGKR|AR 0.228 . YDR430C 269 GYGKRAR|KD 0.085 . YDR430C 270 YGKRARK|DK 0.172 . YDR430C 272 KRARKDK|LL 0.235 . YDR430C 280 LMPIDLK|KD 0.056 . YDR430C 281 MPIDLKK|DI 0.191 . YDR430C 286 KKDIDVK|LL 0.075 . YDR430C 299 TMLPPEK|QT 0.073 . YDR430C 302 PPEKQTK|AS 0.073 . YDR430C 322 YDTFLLK|VL 0.065 . YDR430C 339 SSVMYQK|LI 0.077 . YDR430C 378 SDIEIFK|DT 0.070 . YDR430C 397 TEHPFDR|KR 0.096 . YDR430C 398 EHPFDRK|RI 0.099 . YDR430C 399 HPFDRKR|ID 0.198 . YDR430C 411 EQLELSK|KD 0.058 . YDR430C 412 QLELSKK|DQ 0.103 . YDR430C 415 LSKKDQK|AD 0.062 . YDR430C 433 LPGWTNK|ID 0.058 . YDR430C 448 FEDVLQR|FR 0.098 . YDR430C 450 DVLQRFR|GD 0.064 . YDR430C 456 RGDLETK|GD 0.059 . YDR430C 466 LFQDLIR|KY 0.083 . YDR430C 467 FQDLIRK|YI 0.075 . YDR430C 472 RKYIVHK|PC 0.068 . YDR430C 487 GSEEFSK|SL 0.133 . YDR430C 496 DDEEQTR|LR 0.080 . YDR430C 498 EEQTRLR|EK 0.089 . YDR430C 500 QTRLREK|IT 0.064 . YDR430C 509 ALDEQDK|KN 0.060 . YDR430C 510 LDEQDKK|NI 0.089 . YDR430C 514 DKKNIFK|RG 0.058 . YDR430C 515 KKNIFKR|GI 0.421 . YDR430C 522 GILLQEK|QN 0.062 . YDR430C 526 QEKQNEK|ED 0.059 . YDR430C 538 LPTLQIK|DI 0.073 . YDR430C 542 QIKDIPR|AG 0.086 . YDR430C 546 IPRAGDK|YS 0.071 . YDR430C 552 KYSIEQK|NN 0.070 . YDR430C 558 KNNTMSR|IT 0.151 . YDR430C 569 NGITYVR|GK 0.071 . YDR430C 571 ITYVRGK|RL 0.059 . YDR430C 572 TYVRGKR|LL 0.460 . YDR430C 611 EIEDQIK|LH 0.065 . YDR430C 633 PNTTEPR|LI 0.091 . YDR430C 646 GWSLNSK|TD 0.073 . YDR430C 656 IFEFWSK|IL 0.060 . YDR430C 665 LETDFHK|NS 0.062 . YDR430C 669 FHKNSDK|LK 0.057 . YDR430C 671 KNSDKLK|VL 0.080 . YDR430C 675 KLKVLIR|LL 0.087 . YDR430C 694 AGHAFAR|GY 0.170 . YDR430C 702 YSAAHYR|SS 0.318 . YDR430C 722 QLQFINR|LH 0.077 . YDR430C 735 NEETFQR|EV 0.126 . YDR430C 740 QREVVDK|LT 0.075 . YDR430C 746 KLTELQK|YI 0.067 . YDR430C 767 DSDVQAK|TV 0.098 . YDR430C 775 VESQISK|FM 0.074 . YDR430C 779 ISKFMER|LP 0.076 . YDR430C 791 CLPNGPK|TS 0.057 . YDR430C 801 YPLIGSK|CK 0.059 . YDR430C 803 LIGSKCK|HT 0.074 . YDR430C 808 CKHTLIK|FP 0.084 . YDR430C 828 GVPYTHK|DG 0.074 . YDR430C 843 SNMLTFK|HL 0.079 . YDR430C 847 TFKHLHR|EV 0.156 . YDR430C 850 HLHREVR|EK 0.436 . YDR430C 852 HREVREK|GG 0.084 . YDR430C 875 FSFYSYR|DP 0.094 . YDR430C 881 RDPQPLK|SL 0.084 . YDR430C 887 KSLETFK|NS 0.067 . YDR430C 891 TFKNSGR|YI 0.090 . YDR430C 898 YILNDAK|WG 0.058 . YDR430C 908 TDLDEAK|LT 0.066 . YDR430C 919 QQVDAPK|SP 0.085 . YDR430C 922 DAPKSPK|GE 0.073 . YDR430C 938 GVTDDMK|QA 0.065 . YDR430C 941 DDMKQAR|RE 0.082 . YDR430C 942 DMKQARR|EQ 0.078 . YDR430C 955 SLLDVHR|VA 0.106 . YDR430C 959 VHRVAEK|YL 0.070 . YDR430C 964 EKYLLNK|EG 0.054 . YDR430C 978 GPGIEGK|TV 0.097 . YDR430C 987 SPNWEVK|EL 0.079 . ____________________________^_________________

  • Fasta :-

    >YDR430C ATGTTGCGGTTTCAGCGATTTGCGTCCTCGTATGCCCAAGCACAGGCCGTTAGAAAATAT CCAGTTGGAGGTATATTCCATGGTTATGAAGTGAGAAGAATTCTACCGGTTCCGGAGCTG AGACTCACTGCGGTAGATTTGGTGCACTCCCAGACAGGAGCCGAGCATTTGCATATTGAT AGAGACGACAAGAATAATGTGTTCAGCATTGCTTTTAAAACCAACCCTCCAGATTCCACT GGGGTCCCTCATATTCTAGAGCATACAACGTTGTGTGGGTCTGTTAAATATCCAGTTAGG GACCCTTTTTTCAAAATGCTAAATAAATCTCTAGCTAATTTCATGAACGCTATGACAGGT CCAGATTATACATTTTTTCCCTTTTCCACTACGAACCCTCAAGATTTCGCTAATTTAAGA GGTGTTTATTTAGACTCCACCTTGAATCCGCTACTTAAACAAGAAGATTTTGATCAGGAG GGTTGGAGGTTGGAGCATAAAAACATCACAGACCCGGAGAGTAACATTGTTTTCAAAGGT GTTGTCTATAACGAAATGAAAGGTCAAATATCAAATGCCAATTACTATTTCTGGAGTAAA TTTCAACAGTCTATTTATCCTTCCCTGAATAACTCCGGCGGAGATCCTATGAAAATTACA GACTTGAGATACGGCGATCTCTTGGATTTCCATCACAAAAATTACCATCCCTCCAATGCA AAAACTTTCACGTACGGTAACTTGCCATTGGTGGATACGTTAAAGCAATTAAATGAGCAG TTCAGTGGTTACGGGAAGAGAGCTCGAAAGGATAAGTTGTTAATGCCTATTGATTTAAAA AAAGACATAGATGTCAAGTTACTGGGTCAAATAGATACTATGCTTCCACCGGAGAAGCAG ACAAAAGCCTCAATGACGTGGATTTGTGGAGCGCCACAGGACACATATGATACCTTTTTG TTAAAAGTACTGGGGAATTTATTAATGGATGGCCATTCTTCTGTAATGTATCAAAAATTA ATAGAATCAGGAATTGGTTTGGAGTTCTCCGTAAATTCAGGTGTTGAACCAACTACAGCA GTAAATTTGCTAACTGTTGGTATACAGGGCGTGAGTGATATTGAAATATTTAAAGACACT GTAAATAATATTTTTCAAAACCTGTTGGAAACAGAACATCCTTTTGACCGCAAGCGTATC GATGCCATAATTGAACAATTGGAATTATCTAAGAAGGATCAAAAGGCTGACTTTGGACTT CAATTACTCTATTCTATACTACCTGGTTGGACAAACAAAATCGATCCTTTTGAGAGCTTG TTGTTTGAGGACGTTTTGCAAAGATTTAGAGGTGACTTAGAAACGAAAGGTGATACTTTA TTCCAAGATTTAATCCGTAAATATATCGTTCATAAACCTTGTTTCACGTTTTCCATTCAG GGATCTGAAGAGTTCTCTAAATCTTTGGATGATGAAGAACAAACAAGACTGAGAGAAAAA ATTACTGCCTTGGATGAACAAGACAAGAAAAACATCTTTAAACGTGGTATACTGTTACAG GAGAAACAAAATGAAAAAGAAGATTTATCCTGTTTACCTACCTTACAAATAAAAGACATC CCAAGAGCTGGTGATAAATATTCAATCGAACAGAAGAATAATACAATGTCTAGGATTACT GATACCAATGGTATCACATATGTCAGAGGTAAACGTTTACTAAATGACATAATACCCTTT GAACTCTTCCCATACTTACCTTTATTTGCTGAATCGTTAACTAACCTAGGGACAACAACA GAATCCTTCAGTGAAATAGAAGATCAGATAAAATTACATACGGGTGGTATATCAACACAT GTAGAGGTTACATCTGACCCTAACACCACAGAGCCTCGCCTGATTTTCGGGTTTGACGGA TGGTCTTTAAATTCGAAGACCGACCACATTTTTGAATTCTGGTCTAAGATCTTACTAGAA ACTGATTTCCATAAAAACAGCGATAAATTGAAAGTTCTTATCCGCTTATTAGCATCTTCA AACACATCTTCTGTAGCAGATGCCGGTCATGCATTTGCAAGGGGCTATTCTGCCGCACAT TATAGATCAAGTGGAGCTATAAATGAGACCCTCAATGGTATTGAGCAACTACAATTTATA AATAGATTGCACAGCTTGTTAGACAATGAAGAAACTTTCCAAAGAGAAGTTGTCGACAAG CTAACTGAATTGCAAAAGTACATTGTTGATACCAATAACATGAATTTTTTTATCACCTCA GACTCTGATGTTCAAGCGAAAACAGTAGAAAGCCAAATTTCAAAATTCATGGAGAGATTA CCTCATGGCAGCTGCTTGCCCAATGGACCAAAGACTTCAGATTATCCTCTTATTGGATCC AAATGTAAACATACTTTGATAAAATTTCCTTTCCAGGTCCATTACACATCCCAAGCTTTA TTGGGTGTGCCGTATACACATAAGGATGGCTCTGCACTTCAAGTTATGTCAAATATGCTA ACATTCAAACATTTGCACAGAGAAGTCAGAGAAAAGGGTGGTGCTTATGGTGGTGGTGCT TCTTATAGCGCCTTAGCGGGTATTTTCAGTTTCTATTCCTATAGGGATCCTCAGCCTTTG AAGAGTTTAGAAACCTTCAAGAATAGCGGGCGTTATATACTGAACGATGCCAAGTGGGGC GTCACAGACCTTGATGAAGCTAAATTGACAATATTTCAACAAGTAGACGCACCTAAAAGT CCCAAAGGAGAAGGCGTGACGTATTTCATGAGCGGTGTTACAGACGATATGAAACAAGCA AGAAGGGAACAACTCTTAGACGTATCTCTCCTGGACGTTCATAGAGTCGCCGAAAAATAT CTACTAAACAAAGAAGGGGTGAGTACGGTCATTGGACCTGGAATCGAGGGGAAGACTGTT TCACCAAATTGGGAGGTGAAGGAACTGTAG
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  • Fasta :-

    MLRFQRFASSYAQAQAVRKYPVGGIFHGYEVRRILPVPELRLTAVDLVHSQTGAEHLHID RDDKNNVFSIAFKTNPPDSTGVPHILEHTTLCGSVKYPVRDPFFKMLNKSLANFMNAMTG PDYTFFPFSTTNPQDFANLRGVYLDSTLNPLLKQEDFDQEGWRLEHKNITDPESNIVFKG VVYNEMKGQISNANYYFWSKFQQSIYPSLNNSGGDPMKITDLRYGDLLDFHHKNYHPSNA KTFTYGNLPLVDTLKQLNEQFSGYGKRARKDKLLMPIDLKKDIDVKLLGQIDTMLPPEKQ TKASMTWICGAPQDTYDTFLLKVLGNLLMDGHSSVMYQKLIESGIGLEFSVNSGVEPTTA VNLLTVGIQGVSDIEIFKDTVNNIFQNLLETEHPFDRKRIDAIIEQLELSKKDQKADFGL QLLYSILPGWTNKIDPFESLLFEDVLQRFRGDLETKGDTLFQDLIRKYIVHKPCFTFSIQ GSEEFSKSLDDEEQTRLREKITALDEQDKKNIFKRGILLQEKQNEKEDLSCLPTLQIKDI PRAGDKYSIEQKNNTMSRITDTNGITYVRGKRLLNDIIPFELFPYLPLFAESLTNLGTTT ESFSEIEDQIKLHTGGISTHVEVTSDPNTTEPRLIFGFDGWSLNSKTDHIFEFWSKILLE TDFHKNSDKLKVLIRLLASSNTSSVADAGHAFARGYSAAHYRSSGAINETLNGIEQLQFI NRLHSLLDNEETFQREVVDKLTELQKYIVDTNNMNFFITSDSDVQAKTVESQISKFMERL PHGSCLPNGPKTSDYPLIGSKCKHTLIKFPFQVHYTSQALLGVPYTHKDGSALQVMSNML TFKHLHREVREKGGAYGGGASYSALAGIFSFYSYRDPQPLKSLETFKNSGRYILNDAKWG VTDLDEAKLTIFQQVDAPKSPKGEGVTYFMSGVTDDMKQARREQLLDVSLLDVHRVAEKY LLNKEGVSTVIGPGIEGKTVSPNWEVKEL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YDR430C604 STESFSEIED0.994unspYDR430C604 STESFSEIED0.994unspYDR430C604 STESFSEIED0.994unspYDR430C725 SNRLHSLLDN0.997unspYDR430C920 SDAPKSPKGE0.995unspYDR430C410 SQLELSKKDQ0.998unspYDR430C488 SEFSKSLDDE0.995unsp

YDR430C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India