YER143W | Ddi1p

UniProt_ID: P40087

Computed_GO_Component_IDs: GO:0005737 GO:0016020 GO:0005886
Computed_GO_Components: cytoplasm membrane plasma membrane
Computed_GO_Function_IDs: GO:0004190 GO:0016787 GO:0008233 GO:0005515 GO:0043130
Computed_GO_Functions: aspartic-type endopeptidase activity hydrolase activity peptidase activity protein binding ubiquitin binding
Computed_GO_Process_IDs: GO:0015031 GO:0006508 GO:0006810
Computed_GO_Processes: protein transport proteolysis transport
Curated_GO_Component_IDs: GO:0005886
Curated_GO_Components: plasma membrane
Curated_GO_Function_IDs: GO:0000149 GO:0043130
Curated_GO_Functions: SNARE binding ubiquitin binding
Curated_GO_Processes: protein secretion protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway ubiquitin-dependent protein catabolic process vesicle-mediated transport

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	YER143W	OTHER	0.999982	0.000016	0.000002

No Results

Fasta :-
>YER143W MDLTISNELTGEIYGPIEVSEDMALTDLIALLQADCGFDKTKHDLYYNMDILDSNRTQSL KELGLKTDDLLLIRGKISNSIQTDAATLSDEAFIEQFRQELLNNQMLRSQLILQIPGLND LVNDPLLFRERLGPLILQRRYGGYNTAMNPFGIPQDEYTRLMANPDDPDNKKRIAELLDQ QAIDEQLRNAIEYTPEMFTQVPMLYINIEINNYPVKAFVDTGAQTTIMSTRLAKKTGLSR MIDKRFIGEARGVGTGKIIGRIHQAQVKIETQYIPCSFTVLDTDIDVLIGLDMLKRHLAC VDLKENVLRIAEVETSFLSEAEIPKSFQEGLPAPTSVTTSSDKPLTPTKTSSTLPPQPGA VPALAPRTGMGPTPTGRSTAGATTATGRTFPEQTIKQLMDLGFPRDAVVKALKQTNGNAE FAASLLFQ
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YER143W.fa Sequence name : YER143W Sequence length : 428 VALUES OF COMPUTED PARAMETERS Coef20 : 3.246 CoefTot : 0.000 ChDiff : -12 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.735 1.265 0.021 0.472 MesoH : -0.277 0.307 -0.348 0.151 MuHd_075 : 27.684 11.238 7.308 2.916 MuHd_095 : 13.169 18.163 4.564 4.104 MuHd_100 : 13.644 15.592 4.997 3.214 MuHd_105 : 21.623 13.711 6.239 2.718 Hmax_075 : 12.600 9.100 1.658 4.468 Hmax_095 : 7.087 12.425 1.021 4.357 Hmax_100 : 5.300 11.600 0.683 4.340 Hmax_105 : 13.400 13.500 2.535 4.890 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9510 0.0490 DFMC : 0.9647 0.0353

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 428 YER143W MDLTISNELTGEIYGPIEVSEDMALTDLIALLQADCGFDKTKHDLYYNMDILDSNRTQSLKELGLKTDDLLLIRGKISNS 80 IQTDAATLSDEAFIEQFRQELLNNQMLRSQLILQIPGLNDLVNDPLLFRERLGPLILQRRYGGYNTAMNPFGIPQDEYTR 160 LMANPDDPDNKKRIAELLDQQAIDEQLRNAIEYTPEMFTQVPMLYINIEINNYPVKAFVDTGAQTTIMSTRLAKKTGLSR 240 MIDKRFIGEARGVGTGKIIGRIHQAQVKIETQYIPCSFTVLDTDIDVLIGLDMLKRHLACVDLKENVLRIAEVETSFLSE 320 AEIPKSFQEGLPAPTSVTTSSDKPLTPTKTSSTLPPQPGAVPALAPRTGMGPTPTGRSTAGATTATGRTFPEQTIKQLMD 400 LGFPRDAVVKALKQTNGNAEFAASLLFQ 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YER143W 40 ADCGFDK|TK 0.062 . YER143W 42 CGFDKTK|HD 0.065 . YER143W 56 DILDSNR|TQ 0.078 . YER143W 61 NRTQSLK|EL 0.072 . YER143W 66 LKELGLK|TD 0.056 . YER143W 74 DDLLLIR|GK 0.067 . YER143W 76 LLLIRGK|IS 0.064 . YER143W 98 AFIEQFR|QE 0.067 . YER143W 108 LNNQMLR|SQ 0.115 . YER143W 129 NDPLLFR|ER 0.060 . YER143W 131 PLLFRER|LG 0.066 . YER143W 139 GPLILQR|RY 0.105 . YER143W 140 PLILQRR|YG 0.144 . YER143W 160 PQDEYTR|LM 0.059 . YER143W 171 PDDPDNK|KR 0.060 . YER143W 172 DDPDNKK|RI 0.093 . YER143W 173 DPDNKKR|IA 0.275 . YER143W 188 AIDEQLR|NA 0.091 . YER143W 216 INNYPVK|AF 0.075 . YER143W 231 TTIMSTR|LA 0.119 . YER143W 234 MSTRLAK|KT 0.168 . YER143W 235 STRLAKK|TG 0.074 . YER143W 240 KKTGLSR|MI 0.097 . YER143W 244 LSRMIDK|RF 0.069 . YER143W 245 SRMIDKR|FI 0.474 . YER143W 251 RFIGEAR|GV 0.220 . YER143W 257 RGVGTGK|II 0.082 . YER143W 261 TGKIIGR|IH 0.100 . YER143W 268 IHQAQVK|IE 0.069 . YER143W 295 IGLDMLK|RH 0.054 . YER143W 296 GLDMLKR|HL 0.136 . YER143W 304 LACVDLK|EN 0.056 . YER143W 309 LKENVLR|IA 0.124 . YER143W 325 SEAEIPK|SF 0.107 . YER143W 343 VTTSSDK|PL 0.061 . YER143W 349 KPLTPTK|TS 0.069 . YER143W 367 VPALAPR|TG 0.083 . YER143W 377 GPTPTGR|ST 0.153 . YER143W 388 ATTATGR|TF 0.073 . YER143W 396 FPEQTIK|QL 0.067 . YER143W 405 MDLGFPR|DA 0.111 . YER143W 410 PRDAVVK|AL 0.070 . YER143W 413 AVVKALK|QT 0.060 . ____________________________^_________________

Fasta :-
>YER143W ATGGATTTAACAATTTCAAACGAACTTACTGGCGAGATATACGGCCCAATTGAAGTCAGT GAAGATATGGCTTTAACTGATCTAATAGCATTACTGCAGGCCGATTGCGGGTTTGACAAA ACAAAACACGACTTATATTACAATATGGACATTCTAGACTCAAACAGAACTCAGTCTTTA AAAGAACTAGGGCTCAAAACCGATGACTTATTATTGATTAGGGGTAAGATTTCCAATTCC ATTCAAACAGATGCTGCTACTTTGTCCGACGAAGCGTTCATAGAGCAATTTAGACAAGAG CTACTTAATAATCAAATGCTTAGATCACAACTCATTTTGCAAATCCCTGGATTGAATGAT TTAGTAAATGACCCACTGTTGTTTAGGGAAAGATTGGGCCCGCTCATATTACAAAGACGT TATGGTGGCTATAACACCGCCATGAATCCTTTTGGCATCCCCCAAGATGAATATACTAGA CTAATGGCCAACCCCGATGATCCTGACAACAAGAAGAGGATTGCAGAGCTTTTAGACCAA CAAGCTATCGATGAACAGTTGCGCAATGCTATCGAATATACACCTGAAATGTTTACCCAG GTCCCTATGCTTTACATTAATATCGAAATAAATAACTACCCCGTAAAGGCATTTGTAGAT ACAGGGGCTCAAACAACGATTATGTCCACCAGGTTAGCGAAGAAAACTGGCCTGTCGAGA ATGATTGACAAGAGATTTATTGGAGAAGCTCGTGGCGTAGGAACCGGCAAAATTATTGGG AGAATTCACCAAGCCCAAGTCAAAATAGAAACACAATATATTCCATGCAGTTTTACCGTC TTAGATACTGACATCGATGTTTTGATAGGACTAGACATGCTGAAAAGGCATTTGGCTTGT GTGGACTTAAAGGAAAACGTTCTTAGGATAGCAGAAGTGGAGACAAGCTTTTTGAGTGAA GCGGAAATCCCAAAAAGTTTTCAAGAAGGACTTCCAGCACCAACGTCAGTTACAACTTCG TCTGATAAGCCCCTAACACCCACCAAGACTAGTTCAACTCTACCACCACAACCGGGGGCT GTTCCTGCGCTTGCTCCAAGGACTGGTATGGGGCCAACACCTACGGGAAGAAGTACAGCC GGTGCTACAACGGCAACCGGGAGAACGTTTCCCGAACAAACGATTAAACAGCTTATGGAT CTAGGTTTCCCTAGGGATGCTGTGGTAAAGGCTCTTAAACAGACTAACGGAAATGCAGAA TTTGCTGCATCCCTCCTTTTCCAATGA
Download Fasta

Fasta :-

MDLTISNELTGEIYGPIEVSEDMALTDLIALLQADCGFDKTKHDLYYNMDILDSNRTQSL KELGLKTDDLLLIRGKISNSIQTDAATLSDEAFIEQFRQELLNNQMLRSQLILQIPGLND LVNDPLLFRERLGPLILQRRYGGYNTAMNPFGIPQDEYTRLMANPDDPDNKKRIAELLDQ QAIDEQLRNAIEYTPEMFTQVPMLYINIEINNYPVKAFVDTGAQTTIMSTRLAKKTGLSR MIDKRFIGEARGVGTGKIIGRIHQAQVKIETQYIPCSFTVLDTDIDVLIGLDMLKRHLAC VDLKENVLRIAEVETSFLSEAEIPKSFQEGLPAPTSVTTSSDKPLTPTKTSSTLPPQPGA VPALAPRTGMGPTPTGRSTAGATTATGRTFPEQTIKQLMDLGFPRDAVVKALKQTNGNAE FAASLLFQ

Ubiquitin-related

title: catalytic motif
coordinates: D220,T221,G222

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	YER143W	T	348	0.748	0.315	YER143W	T	346	0.734	0.070	YER143W	T	350	0.722	0.071	YER143W	T	353	0.705	0.486	YER143W	T	368	0.687	0.027	YER143W	T	338	0.679	0.472	YER143W	T	339	0.667	0.048	YER143W	T	373	0.657	0.347	YER143W	T	375	0.647	0.558	YER143W	T	379	0.646	0.050	YER143W	T	335	0.630	0.492	YER143W	S	351	0.627	0.073	YER143W	S	341	0.614	0.097	YER143W	S	352	0.600	0.027	YER143W	T	383	0.583	0.129	YER143W	S	340	0.573	0.043	YER143W	T	384	0.570	0.060	YER143W	S	336	0.549	0.063	YER143W	T	386	0.533	0.092	YER143W	S	378	0.528	0.021

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	YER143W	T	348	0.748	0.315	YER143W	T	346	0.734	0.070	YER143W	T	350	0.722	0.071	YER143W	T	353	0.705	0.486	YER143W	T	368	0.687	0.027	YER143W	T	338	0.679	0.472	YER143W	T	339	0.667	0.048	YER143W	T	373	0.657	0.347	YER143W	T	375	0.647	0.558	YER143W	T	379	0.646	0.050	YER143W	T	335	0.630	0.492	YER143W	S	351	0.627	0.073	YER143W	S	341	0.614	0.097	YER143W	S	352	0.600	0.027	YER143W	T	383	0.583	0.129	YER143W	S	340	0.573	0.043	YER143W	T	384	0.570	0.060	YER143W	S	336	0.549	0.063	YER143W	T	386	0.533	0.092	YER143W	S	378	0.528	0.021

	ID	Site	Peptide	Score	Method
	YER143W	59 S	NRTQSLKEL	0.997	unsp

YER143W | Ddi1p

ID's

UniProt_ID: P40087

GEO Functions

Computed_GO_Component_IDs: GO:0005737 GO:0016020 GO:0005886

Computed_GO_Components: cytoplasm membrane plasma membrane

Computed_GO_Function_IDs: GO:0004190 GO:0016787 GO:0008233 GO:0005515 GO:0043130

Computed_GO_Functions: aspartic-type endopeptidase activity hydrolase activity peptidase activity protein binding ubiquitin binding

Computed_GO_Process_IDs: GO:0015031 GO:0006508 GO:0006810

Computed_GO_Processes: protein transport proteolysis transport

Curated_GO_Component_IDs: GO:0005886

Curated_GO_Components: plasma membrane

Curated_GO_Function_IDs: GO:0000149 GO:0043130

Curated_GO_Functions: SNARE binding ubiquitin binding

Curated_GO_Processes: protein secretion protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway ubiquitin-dependent protein catabolic process vesicle-mediated transport

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Ubiquitin-related

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

YER143W

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India