YER162C | Rad4p

_IDPredictionOTHERSPmTPCS_Position
YER162COTHER0.9999940.0000000.000005
No Results

  • Fasta :-

    >YER162C MNEDLPKEYFELIRKALNEKEAEKAPLSRRRRVRRKNQPLPDAKKKFKTGLNELPRESVV TVNLDSSDDGVVTVPTDDSVEEIQSSEEDYDSEEFEDVTDGNEVAGVEDISVEIKPSSKR NSDARRTSRNVCSNEERKRRKYFHMLYLVCLMVHGFIRNEWINSKRLSRKLSNLVPEKVF ELLHPQKDEELPLRSTRKLLDGLKKCMELWQKHWKITKKYDNVGLYMRTWKEIEMSANNK RKFKTLKRSDFLRAVSKGHGDPDISVQGFVAMLRACNVNARLIMSCQPPDFTNMKIDTSL NGNNAYKDMVKYPIFWCEVWDKFSKKWITVDPVNLKTIEQVRLHSKLAPKGVACCERNML RYVIAYDRKYGCRDVTRRYAQWMNSKVRKRRITKDDFGEKWFRKVITALHHRKRTKIDDY EDQYFFQRDESEGIPDSVQDLKNHPYYVLEQDIKQTQIVKPGCKECGYLKVHGKVGKVLK VYAKRDIADLKSARQWYMNGRILKTGSRCKKVIKRTVGRPKGEAEEEDERLYSFEDTELY IPPLASASGEITKNTFGNIEVFAPTMIPGNCCLVENPVAIKAARFLGVEFAPAVTSFKFE RGSTVKPVLSGIVVAKWLREAIETAIDGIEFIQEDDNRKEHLLGALESWNTLLLKLRIRS KLNSTYGKIAEEEPNVTKEQNIADNHDNTETFMGGGFLPGIANHEARPYSEPSEPEDSLD YVSVDKAEESATDDDVGEDYSDFMKELEMSEESD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YER162C.fa Sequence name : YER162C Sequence length : 754 VALUES OF COMPUTED PARAMETERS Coef20 : 3.156 CoefTot : -0.134 ChDiff : 4 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.041 1.347 0.071 0.563 MesoH : -0.151 0.631 -0.241 0.290 MuHd_075 : 16.986 5.167 2.933 1.954 MuHd_095 : 52.831 30.498 14.583 10.372 MuHd_100 : 49.952 26.004 13.597 9.485 MuHd_105 : 40.331 18.657 11.136 7.514 Hmax_075 : -8.517 -0.583 -5.449 0.957 Hmax_095 : 9.625 12.950 0.760 4.795 Hmax_100 : 8.200 11.000 0.246 4.340 Hmax_105 : 4.600 9.100 -0.341 4.317 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7381 0.2619 DFMC : 0.8483 0.1517
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 754 YER162C MNEDLPKEYFELIRKALNEKEAEKAPLSRRRRVRRKNQPLPDAKKKFKTGLNELPRESVVTVNLDSSDDGVVTVPTDDSV 80 EEIQSSEEDYDSEEFEDVTDGNEVAGVEDISVEIKPSSKRNSDARRTSRNVCSNEERKRRKYFHMLYLVCLMVHGFIRNE 160 WINSKRLSRKLSNLVPEKVFELLHPQKDEELPLRSTRKLLDGLKKCMELWQKHWKITKKYDNVGLYMRTWKEIEMSANNK 240 RKFKTLKRSDFLRAVSKGHGDPDISVQGFVAMLRACNVNARLIMSCQPPDFTNMKIDTSLNGNNAYKDMVKYPIFWCEVW 320 DKFSKKWITVDPVNLKTIEQVRLHSKLAPKGVACCERNMLRYVIAYDRKYGCRDVTRRYAQWMNSKVRKRRITKDDFGEK 400 WFRKVITALHHRKRTKIDDYEDQYFFQRDESEGIPDSVQDLKNHPYYVLEQDIKQTQIVKPGCKECGYLKVHGKVGKVLK 480 VYAKRDIADLKSARQWYMNGRILKTGSRCKKVIKRTVGRPKGEAEEEDERLYSFEDTELYIPPLASASGEITKNTFGNIE 560 VFAPTMIPGNCCLVENPVAIKAARFLGVEFAPAVTSFKFERGSTVKPVLSGIVVAKWLREAIETAIDGIEFIQEDDNRKE 640 HLLGALESWNTLLLKLRIRSKLNSTYGKIAEEEPNVTKEQNIADNHDNTETFMGGGFLPGIANHEARPYSEPSEPEDSLD 720 YVSVDKAEESATDDDVGEDYSDFMKELEMSEESD 800 ...............................P..P............................................. 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......................................................................P......... 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .................................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 3 Name Pos Context Score Pred ____________________________v_________________ YER162C 7 MNEDLPK|EY 0.064 . YER162C 14 EYFELIR|KA 0.080 . YER162C 15 YFELIRK|AL 0.075 . YER162C 20 RKALNEK|EA 0.079 . YER162C 24 NEKEAEK|AP 0.053 . YER162C 29 EKAPLSR|RR 0.077 . YER162C 30 KAPLSRR|RR 0.084 . YER162C 31 APLSRRR|RV 0.176 . YER162C 32 PLSRRRR|VR 0.533 *ProP* YER162C 34 SRRRRVR|RK 0.387 . YER162C 35 RRRRVRR|KN 0.611 *ProP* YER162C 36 RRRVRRK|NQ 0.076 . YER162C 44 QPLPDAK|KK 0.064 . YER162C 45 PLPDAKK|KF 0.098 . YER162C 46 LPDAKKK|FK 0.131 . YER162C 48 DAKKKFK|TG 0.066 . YER162C 56 GLNELPR|ES 0.079 . YER162C 115 DISVEIK|PS 0.071 . YER162C 119 EIKPSSK|RN 0.070 . YER162C 120 IKPSSKR|NS 0.213 . YER162C 125 KRNSDAR|RT 0.143 . YER162C 126 RNSDARR|TS 0.182 . YER162C 129 DARRTSR|NV 0.427 . YER162C 137 VCSNEER|KR 0.106 . YER162C 138 CSNEERK|RR 0.066 . YER162C 139 SNEERKR|RK 0.127 . YER162C 140 NEERKRR|KY 0.455 . YER162C 141 EERKRRK|YF 0.103 . YER162C 158 MVHGFIR|NE 0.083 . YER162C 165 NEWINSK|RL 0.065 . YER162C 166 EWINSKR|LS 0.141 . YER162C 169 NSKRLSR|KL 0.254 . YER162C 170 SKRLSRK|LS 0.091 . YER162C 178 SNLVPEK|VF 0.062 . YER162C 187 ELLHPQK|DE 0.068 . YER162C 194 DEELPLR|ST 0.137 . YER162C 197 LPLRSTR|KL 0.293 . YER162C 198 PLRSTRK|LL 0.092 . YER162C 204 KLLDGLK|KC 0.051 . YER162C 205 LLDGLKK|CM 0.096 . YER162C 212 CMELWQK|HW 0.056 . YER162C 215 LWQKHWK|IT 0.080 . YER162C 218 KHWKITK|KY 0.069 . YER162C 219 HWKITKK|YD 0.143 . YER162C 228 NVGLYMR|TW 0.100 . YER162C 231 LYMRTWK|EI 0.172 . YER162C 240 EMSANNK|RK 0.067 . YER162C 241 MSANNKR|KF 0.182 . YER162C 242 SANNKRK|FK 0.144 . YER162C 244 NNKRKFK|TL 0.158 . YER162C 247 RKFKTLK|RS 0.064 . YER162C 248 KFKTLKR|SD 0.163 . YER162C 253 KRSDFLR|AV 0.393 . YER162C 257 FLRAVSK|GH 0.075 . YER162C 274 GFVAMLR|AC 0.073 . YER162C 281 ACNVNAR|LI 0.102 . YER162C 295 PDFTNMK|ID 0.058 . YER162C 307 NGNNAYK|DM 0.069 . YER162C 311 AYKDMVK|YP 0.057 . YER162C 322 WCEVWDK|FS 0.070 . YER162C 325 VWDKFSK|KW 0.066 . YER162C 326 WDKFSKK|WI 0.123 . YER162C 336 VDPVNLK|TI 0.070 . YER162C 342 KTIEQVR|LH 0.081 . YER162C 346 QVRLHSK|LA 0.072 . YER162C 350 HSKLAPK|GV 0.094 . YER162C 357 GVACCER|NM 0.083 . YER162C 361 CERNMLR|YV 0.126 . YER162C 368 YVIAYDR|KY 0.075 . YER162C 369 VIAYDRK|YG 0.078 . YER162C 373 DRKYGCR|DV 0.161 . YER162C 377 GCRDVTR|RY 0.099 . YER162C 378 CRDVTRR|YA 0.205 . YER162C 386 AQWMNSK|VR 0.052 . YER162C 388 WMNSKVR|KR 0.092 . YER162C 389 MNSKVRK|RR 0.119 . YER162C 390 NSKVRKR|RI 0.226 . YER162C 391 SKVRKRR|IT 0.605 *ProP* YER162C 394 RKRRITK|DD 0.175 . YER162C 400 KDDFGEK|WF 0.067 . YER162C 403 FGEKWFR|KV 0.140 . YER162C 404 GEKWFRK|VI 0.104 . YER162C 412 ITALHHR|KR 0.085 . YER162C 413 TALHHRK|RT 0.075 . YER162C 414 ALHHRKR|TK 0.215 . YER162C 416 HHRKRTK|ID 0.074 . YER162C 428 DQYFFQR|DE 0.136 . YER162C 442 DSVQDLK|NH 0.054 . YER162C 454 VLEQDIK|QT 0.066 . YER162C 460 KQTQIVK|PG 0.056 . YER162C 464 IVKPGCK|EC 0.060 . YER162C 470 KECGYLK|VH 0.065 . YER162C 474 YLKVHGK|VG 0.058 . YER162C 477 VHGKVGK|VL 0.064 . YER162C 480 KVGKVLK|VY 0.059 . YER162C 484 VLKVYAK|RD 0.066 . YER162C 485 LKVYAKR|DI 0.223 . YER162C 491 RDIADLK|SA 0.095 . YER162C 494 ADLKSAR|QW 0.104 . YER162C 501 QWYMNGR|IL 0.097 . YER162C 504 MNGRILK|TG 0.127 . YER162C 508 ILKTGSR|CK 0.077 . YER162C 510 KTGSRCK|KV 0.074 . YER162C 511 TGSRCKK|VI 0.335 . YER162C 514 RCKKVIK|RT 0.063 . YER162C 515 CKKVIKR|TV 0.287 . YER162C 519 IKRTVGR|PK 0.150 . YER162C 521 RTVGRPK|GE 0.072 . YER162C 530 AEEEDER|LY 0.071 . YER162C 553 ASGEITK|NT 0.070 . YER162C 581 ENPVAIK|AA 0.064 . YER162C 584 VAIKAAR|FL 0.153 . YER162C 598 PAVTSFK|FE 0.062 . YER162C 601 TSFKFER|GS 0.118 . YER162C 606 ERGSTVK|PV 0.079 . YER162C 616 SGIVVAK|WL 0.095 . YER162C 619 VVAKWLR|EA 0.086 . YER162C 638 IQEDDNR|KE 0.077 . YER162C 639 QEDDNRK|EH 0.060 . YER162C 655 WNTLLLK|LR 0.057 . YER162C 657 TLLLKLR|IR 0.092 . YER162C 659 LLKLRIR|SK 0.103 . YER162C 661 KLRIRSK|LN 0.073 . YER162C 668 LNSTYGK|IA 0.097 . YER162C 678 EEPNVTK|EQ 0.061 . YER162C 707 IANHEAR|PY 0.115 . YER162C 726 DYVSVDK|AE 0.061 . YER162C 745 DYSDFMK|EL 0.080 . ____________________________^_________________

  • Fasta :-

    >YER162C ATGAATGAAGACCTGCCCAAGGAATATTTTGAACTAATAAGGAAGGCTCTTAACGAGAAA GAGGCAGAAAAAGCGCCCCTGAGTAGAAGAAGAAGAGTCAGAAGGAAGAACCAGCCCCTA CCAGATGCCAAGAAGAAGTTTAAAACAGGGTTGAATGAATTGCCACGAGAAAGCGTTGTT ACTGTAAACTTAGATTCTTCAGATGATGGCGTCGTTACGGTACCGACGGATGATAGTGTA GAGGAAATCCAGTCATCTGAAGAAGATTATGATTCGGAGGAATTTGAAGACGTGACAGAT GGAAATGAGGTGGCCGGTGTAGAAGATATATCTGTTGAAATTAAGCCCTCTAGTAAAAGG AATAGTGATGCTAGAAGGACAAGCCGCAACGTTTGTTCTAATGAAGAACGGAAAAGGAGA AAATATTTCCACATGTTGTATCTAGTTTGCTTGATGGTTCATGGATTTATACGAAATGAA TGGATTAACAGCAAGCGCTTGTCTAGAAAACTGAGCAACTTAGTTCCTGAGAAAGTGTTT GAGCTACTGCATCCTCAGAAAGATGAGGAACTCCCACTTAGGAGTACTAGGAAATTATTA GATGGGTTGAAGAAATGCATGGAGTTATGGCAAAAACACTGGAAGATCACTAAAAAATAT GATAATGTGGGACTTTATATGAGAACCTGGAAAGAAATTGAAATGAGCGCCAATAACAAA AGAAAATTCAAGACGTTGAAAAGATCTGACTTTTTAAGGGCCGTCAGTAAAGGTCACGGA GATCCTGATATTTCAGTGCAAGGTTTCGTTGCGATGCTCAGGGCTTGTAATGTTAACGCA CGACTTATCATGTCATGTCAACCGCCAGATTTTACCAATATGAAGATTGACACTTCTTTG AATGGAAACAATGCGTACAAAGATATGGTCAAGTATCCGATTTTTTGGTGTGAAGTGTGG GACAAATTCTCTAAGAAATGGATAACTGTTGACCCAGTAAATCTCAAAACCATTGAACAG GTCAGACTTCATTCCAAGTTGGCACCGAAAGGCGTGGCGTGCTGCGAAAGAAATATGTTG AGGTACGTGATTGCTTACGATCGGAAGTATGGCTGTAGAGATGTAACTCGAAGATATGCC CAATGGATGAACTCTAAAGTAAGAAAAAGAAGAATTACTAAAGATGACTTTGGTGAGAAA TGGTTCAGAAAAGTGATAACAGCACTTCACCATAGAAAGAGAACCAAAATTGATGATTAC GAAGATCAATATTTTTTTCAGAGAGATGAAAGTGAAGGCATACCAGATTCGGTGCAGGAT TTGAAAAACCACCCATATTATGTTTTAGAACAAGATATCAAACAGACTCAAATTGTAAAG CCAGGATGTAAAGAGTGTGGATATTTAAAAGTACATGGAAAAGTTGGGAAGGTTTTGAAA GTTTATGCAAAAAGAGATATTGCGGATTTGAAAAGTGCTAGACAATGGTACATGAACGGC CGAATTTTAAAAACTGGTAGCAGGTGTAAAAAGGTGATAAAGAGGACAGTTGGAAGGCCT AAGGGCGAAGCAGAAGAAGAAGATGAAAGATTATATAGCTTTGAAGACACAGAATTATAC ATCCCTCCATTAGCCAGTGCGAGCGGTGAAATAACCAAGAATACATTTGGAAACATCGAA GTTTTTGCACCAACGATGATACCTGGTAACTGTTGTTTGGTTGAGAATCCTGTGGCAATT AAAGCTGCTAGGTTTTTGGGGGTGGAATTTGCACCTGCTGTAACTTCTTTTAAGTTTGAA CGCGGCAGTACAGTTAAGCCAGTTTTAAGTGGCATTGTTGTTGCAAAGTGGCTCAGAGAA GCTATTGAAACCGCTATTGATGGAATAGAGTTTATTCAAGAGGATGATAATAGGAAGGAA CATTTGCTTGGTGCTTTGGAGAGTTGGAATACTTTACTGCTAAAACTGCGTATTCGTAGC AAGCTGAACTCCACATATGGTAAAATTGCCGAGGAAGAACCTAACGTTACGAAGGAACAG AATATTGCGGACAATCACGATAATACGGAGACTTTTATGGGAGGTGGGTTCCTACCAGGT ATAGCAAACCACGAAGCAAGGCCGTATAGTGAACCTTCAGAGCCAGAAGATAGTTTAGAT TATGTTTCTGTTGACAAAGCGGAGGAAAGTGCTACAGACGACGATGTCGGGGAGGATTAT TCGGATTTTATGAAAGAACTAGAGATGTCAGAGGAATCAGACTGA
  • Download Fasta

  • Fasta :-

    MNEDLPKEYFELIRKALNEKEAEKAPLSRRRRVRRKNQPLPDAKKKFKTGLNELPRESVV TVNLDSSDDGVVTVPTDDSVEEIQSSEEDYDSEEFEDVTDGNEVAGVEDISVEIKPSSKR NSDARRTSRNVCSNEERKRRKYFHMLYLVCLMVHGFIRNEWINSKRLSRKLSNLVPEKVF ELLHPQKDEELPLRSTRKLLDGLKKCMELWQKHWKITKKYDNVGLYMRTWKEIEMSANNK RKFKTLKRSDFLRAVSKGHGDPDISVQGFVAMLRACNVNARLIMSCQPPDFTNMKIDTSL NGNNAYKDMVKYPIFWCEVWDKFSKKWITVDPVNLKTIEQVRLHSKLAPKGVACCERNML RYVIAYDRKYGCRDVTRRYAQWMNSKVRKRRITKDDFGEKWFRKVITALHHRKRTKIDDY EDQYFFQRDESEGIPDSVQDLKNHPYYVLEQDIKQTQIVKPGCKECGYLKVHGKVGKVLK VYAKRDIADLKSARQWYMNGRILKTGSRCKKVIKRTVGRPKGEAEEEDERLYSFEDTELY IPPLASASGEITKNTFGNIEVFAPTMIPGNCCLVENPVAIKAARFLGVEFAPAVTSFKFE RGSTVKPVLSGIVVAKWLREAIETAIDGIEFIQEDDNRKEHLLGALESWNTLLLKLRIRS KLNSTYGKIAEEEPNVTKEQNIADNHDNTETFMGGGFLPGIANHEARPYSEPSEPEDSLD YVSVDKAEESATDDDVGEDYSDFMKELEMSEESD

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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YER162C90 YSEEDYDSEE0.991unspYER162C90 YSEEDYDSEE0.991unspYER162C90 YSEEDYDSEE0.991unspYER162C92 SEDYDSEEFE0.994unspYER162C118 SIKPSSKRNS0.996unspYER162C122 SSKRNSDARR0.991unspYER162C127 TDARRTSRNV0.992unspYER162C168 SSKRLSRKLS0.991unspYER162C256 SLRAVSKGHG0.991unspYER162C431 SQRDESEGIP0.992unspYER162C533 SERLYSFEDT0.998unspYER162C730 SKAEESATDD0.996unspYER162C66 SVNLDSSDDG0.994unspYER162C86 SEIQSSEEDY0.997unsp

YER162C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India