YFR010W | ubiquitin-specific protease UBP6

_IDPredictionOTHERSPmTPCS_Position
YFR010WOTHER0.9996970.0000540.000249
No Results

  • Fasta :-

    >YFR010W MSGETFEFNIRHSGKVYPITLSTDATSADLKSKAEELTQVPSARQKYMVKGGLSGEESIK IYPLIKPGSTVMLLGTPDANLISKPAKKNNFIEDLAPEQQVQQFAQLPVGFKNMGNTCYL NATLQALYRVNDLRDMILNYNPSQGVSNSGAQDEEIHKQIVIEMKRCFENLQNKSFKSVL PIVLLNTLRKCYPQFAERDSQGGFYKQQDAEELFTQLFHSMSIVFGDKFSEDFRIQFKTT IKDTANDNDITVKENESDSKLQCHISGTTNFMRNGLLEGLNEKIEKRSDLTGANSIYSVE KKISRLPKFLTVQYVRFFWKRSTNKKSKILRKVVFPFQLDVADMLTPEYAAEKVKVRDEL RKVEKEKNEKEREIKRRKFDPSSSENVMTPREQYETQVALNESEKDQWLEEYKKHFPPNL EKGENPSCVYNLIGVITHQGANSESGHYQAFIRDELDENKWYKFNDDKVSVVEKEKIESL AGGGESDSALILMYKGFGL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YFR010W.fa Sequence name : YFR010W Sequence length : 499 VALUES OF COMPUTED PARAMETERS Coef20 : 3.481 CoefTot : -0.138 ChDiff : -1 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.912 1.018 -0.002 0.449 MesoH : -0.827 -0.083 -0.512 0.135 MuHd_075 : 3.628 8.759 1.283 0.739 MuHd_095 : 34.090 12.174 8.461 5.183 MuHd_100 : 32.293 13.574 8.669 5.258 MuHd_105 : 26.142 13.249 7.572 4.933 Hmax_075 : 4.200 4.900 -1.616 2.532 Hmax_095 : 7.962 1.838 0.563 3.132 Hmax_100 : 9.300 5.100 1.094 3.460 Hmax_105 : 12.017 10.500 2.070 4.970 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9428 0.0572 DFMC : 0.9461 0.0539
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 499 YFR010W MSGETFEFNIRHSGKVYPITLSTDATSADLKSKAEELTQVPSARQKYMVKGGLSGEESIKIYPLIKPGSTVMLLGTPDAN 80 LISKPAKKNNFIEDLAPEQQVQQFAQLPVGFKNMGNTCYLNATLQALYRVNDLRDMILNYNPSQGVSNSGAQDEEIHKQI 160 VIEMKRCFENLQNKSFKSVLPIVLLNTLRKCYPQFAERDSQGGFYKQQDAEELFTQLFHSMSIVFGDKFSEDFRIQFKTT 240 IKDTANDNDITVKENESDSKLQCHISGTTNFMRNGLLEGLNEKIEKRSDLTGANSIYSVEKKISRLPKFLTVQYVRFFWK 320 RSTNKKSKILRKVVFPFQLDVADMLTPEYAAEKVKVRDELRKVEKEKNEKEREIKRRKFDPSSSENVMTPREQYETQVAL 400 NESEKDQWLEEYKKHFPPNLEKGENPSCVYNLIGVITHQGANSESGHYQAFIRDELDENKWYKFNDDKVSVVEKEKIESL 480 AGGGESDSALILMYKGFGL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YFR010W 11 TFEFNIR|HS 0.106 . YFR010W 15 NIRHSGK|VY 0.071 . YFR010W 31 ATSADLK|SK 0.094 . YFR010W 33 SADLKSK|AE 0.064 . YFR010W 44 TQVPSAR|QK 0.129 . YFR010W 46 VPSARQK|YM 0.087 . YFR010W 50 RQKYMVK|GG 0.069 . YFR010W 60 SGEESIK|IY 0.062 . YFR010W 66 KIYPLIK|PG 0.066 . YFR010W 84 DANLISK|PA 0.070 . YFR010W 87 LISKPAK|KN 0.087 . YFR010W 88 ISKPAKK|NN 0.101 . YFR010W 112 QLPVGFK|NM 0.056 . YFR010W 129 TLQALYR|VN 0.079 . YFR010W 134 YRVNDLR|DM 0.090 . YFR010W 158 QDEEIHK|QI 0.061 . YFR010W 165 QIVIEMK|RC 0.067 . YFR010W 166 IVIEMKR|CF 0.147 . YFR010W 174 FENLQNK|SF 0.090 . YFR010W 177 LQNKSFK|SV 0.152 . YFR010W 189 VLLNTLR|KC 0.077 . YFR010W 190 LLNTLRK|CY 0.080 . YFR010W 198 YPQFAER|DS 0.118 . YFR010W 206 SQGGFYK|QQ 0.083 . YFR010W 228 SIVFGDK|FS 0.071 . YFR010W 234 KFSEDFR|IQ 0.080 . YFR010W 238 DFRIQFK|TT 0.062 . YFR010W 242 QFKTTIK|DT 0.065 . YFR010W 253 DNDITVK|EN 0.060 . YFR010W 260 ENESDSK|LQ 0.062 . YFR010W 273 GTTNFMR|NG 0.076 . YFR010W 283 LEGLNEK|IE 0.055 . YFR010W 286 LNEKIEK|RS 0.060 . YFR010W 287 NEKIEKR|SD 0.271 . YFR010W 301 SIYSVEK|KI 0.072 . YFR010W 302 IYSVEKK|IS 0.092 . YFR010W 305 VEKKISR|LP 0.068 . YFR010W 308 KISRLPK|FL 0.299 . YFR010W 316 LTVQYVR|FF 0.079 . YFR010W 320 YVRFFWK|RS 0.062 . YFR010W 321 VRFFWKR|ST 0.396 . YFR010W 325 WKRSTNK|KS 0.064 . YFR010W 326 KRSTNKK|SK 0.168 . YFR010W 328 STNKKSK|IL 0.087 . YFR010W 331 KKSKILR|KV 0.115 . YFR010W 332 KSKILRK|VV 0.129 . YFR010W 353 PEYAAEK|VK 0.054 . YFR010W 355 YAAEKVK|VR 0.063 . YFR010W 357 AEKVKVR|DE 0.098 . YFR010W 361 KVRDELR|KV 0.130 . YFR010W 362 VRDELRK|VE 0.072 . YFR010W 365 ELRKVEK|EK 0.074 . YFR010W 367 RKVEKEK|NE 0.064 . YFR010W 370 EKEKNEK|ER 0.060 . YFR010W 372 EKNEKER|EI 0.124 . YFR010W 375 EKEREIK|RR 0.086 . YFR010W 376 KEREIKR|RK 0.128 . YFR010W 377 EREIKRR|KF 0.227 . YFR010W 378 REIKRRK|FD 0.078 . YFR010W 391 ENVMTPR|EQ 0.090 . YFR010W 405 ALNESEK|DQ 0.072 . YFR010W 413 QWLEEYK|KH 0.056 . YFR010W 414 WLEEYKK|HF 0.090 . YFR010W 422 FPPNLEK|GE 0.060 . YFR010W 453 HYQAFIR|DE 0.107 . YFR010W 460 DELDENK|WY 0.054 . YFR010W 463 DENKWYK|FN 0.092 . YFR010W 468 YKFNDDK|VS 0.056 . YFR010W 474 KVSVVEK|EK 0.080 . YFR010W 476 SVVEKEK|IE 0.067 . YFR010W 495 ALILMYK|GF 0.068 . ____________________________^_________________

  • Fasta :-

    >YFR010W ATGAGCGGAGAAACGTTTGAGTTCAATATTAGACATTCTGGTAAAGTTTACCCAATAACA CTTTCCACTGATGCTACTTCAGCAGATTTGAAAAGCAAAGCAGAGGAATTGACCCAAGTC CCAAGTGCCCGCCAAAAATACATGGTTAAAGGTGGCTTGTCTGGCGAAGAGTCCATTAAA ATATATCCCTTAATCAAGCCAGGATCGACAGTAATGCTATTGGGGACTCCAGATGCTAAC CTGATTTCTAAACCAGCCAAAAAGAATAATTTCATTGAAGACCTTGCGCCTGAGCAACAA GTCCAACAATTTGCTCAATTGCCTGTTGGTTTCAAGAATATGGGCAACACCTGTTATCTG AATGCTACCCTACAGGCTTTATACAGAGTGAACGATTTAAGGGATATGATTCTTAATTAT AACCCTTCTCAAGGTGTGTCTAACAGTGGTGCACAAGATGAAGAGATTCACAAACAAATC GTTATTGAAATGAAGCGTTGTTTTGAAAATTTACAGAATAAAAGTTTCAAGAGTGTTTTG CCAATTGTGTTATTAAACACGCTAAGAAAGTGTTATCCACAATTTGCTGAACGTGATTCA CAAGGTGGGTTCTATAAACAGCAAGACGCTGAGGAGTTGTTTACACAACTATTCCATAGT ATGAGTATTGTTTTTGGTGACAAATTTTCCGAAGATTTCAGGATTCAATTTAAAACTACC ATCAAAGACACAGCTAATGATAACGATATTACTGTTAAAGAAAATGAAAGCGATTCTAAA TTACAATGTCATATTTCTGGTACTACAAATTTCATGAGAAATGGGCTCCTGGAAGGTTTG AATGAGAAAATTGAAAAAAGATCAGACTTGACTGGCGCCAATTCCATCTATAGCGTCGAA AAGAAAATATCAAGATTACCAAAGTTTTTAACTGTTCAGTACGTTAGATTTTTCTGGAAA AGGTCAACCAACAAAAAATCTAAAATATTGCGTAAGGTCGTTTTCCCATTTCAATTAGAT GTTGCAGACATGCTTACCCCAGAATACGCAGCAGAGAAGGTAAAAGTTCGTGACGAACTG AGAAAAGTTGAAAAGGAGAAAAATGAAAAGGAAAGAGAGATCAAAAGGCGTAAATTTGAC CCATCATCCAGTGAAAATGTCATGACACCAAGAGAACAATATGAGACACAAGTGGCTCTT AACGAAAGTGAAAAAGATCAATGGCTCGAAGAGTATAAGAAACATTTTCCTCCAAACTTG GAAAAAGGTGAAAACCCATCTTGTGTTTATAACTTGATCGGTGTCATTACACATCAAGGT GCCAATTCTGAGTCTGGACACTATCAAGCTTTCATAAGGGACGAACTGGACGAAAATAAA TGGTACAAATTTAATGATGATAAAGTTAGCGTTGTTGAAAAGGAAAAAATTGAATCTTTA GCCGGTGGGGGCGAAAGTGATAGTGCACTGATCTTAATGTATAAAGGATTTGGTCTGTAA
  • Download Fasta

  • Fasta :-

    MSGETFEFNIRHSGKVYPITLSTDATSADLKSKAEELTQVPSARQKYMVKGGLSGEESIK IYPLIKPGSTVMLLGTPDANLISKPAKKNNFIEDLAPEQQVQQFAQLPVGFKNMGNTCYL NATLQALYRVNDLRDMILNYNPSQGVSNSGAQDEEIHKQIVIEMKRCFENLQNKSFKSVL PIVLLNTLRKCYPQFAERDSQGGFYKQQDAEELFTQLFHSMSIVFGDKFSEDFRIQFKTT IKDTANDNDITVKENESDSKLQCHISGTTNFMRNGLLEGLNEKIEKRSDLTGANSIYSVE KKISRLPKFLTVQYVRFFWKRSTNKKSKILRKVVFPFQLDVADMLTPEYAAEKVKVRDEL RKVEKEKNEKEREIKRRKFDPSSSENVMTPREQYETQVALNESEKDQWLEEYKKHFPPNL EKGENPSCVYNLIGVITHQGANSESGHYQAFIRDELDENKWYKFNDDKVSVVEKEKIESL AGGGESDSALILMYKGFGL

  • title: Active Site
  • coordinates: N113,C118,H447,D466
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YFR010W382 SKFDPSSSEN0.996unspYFR010W382 SKFDPSSSEN0.996unspYFR010W382 SKFDPSSSEN0.996unspYFR010W403 SALNESEKDQ0.99unspYFR010W13 SNIRHSGKVY0.997unspYFR010W54 SKGGLSGEES0.995unsp

YFR010W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India