YGL094C | poly(A)-specific ribonuclease

_IDPredictionOTHERSPmTPCS_Position
YGL094COTHER0.9997590.0001070.000135
No Results

  • Fasta :-

    >YGL094C MNNWQHFFNNPVDLSEHLKKPYFRFDNRDKEITAISFDEKANLIWSGDSYGCISSYDPTF QLYTRYRGHIGGNSVKDILSHRDGILSISEDSLHFANRRGVTKLNLTSIDIAAFSELNTM CYSPHSLKNNIYCGGDNTNWGIASIDLNRGCLDSLLNYSSKVKLMCSNNKVLSIGRQTGT VDLLDPTSNRTIKSFNAHSASISAMDLRDNTLVTVGKSKRFYNLYADPFVNVYDLRTMRQ LPPVSFSKGTTMGSGGADFVQLHPLLPTVMIVASSSGSFDFIDLSNPTLRTQYVHPCQSI KKLCLSPNGDVLGILEADNHLDTWRRSSNNMGMFTNTPEMLAYPDYFNDITSDGPISVDD ETYPLSSVGMPYYLDKLLSAWPPVVFKSEGTIPQLTGKSPLPSSGKLKSNLAVISSQNEK LSTQEFPLLRYDRTKYGMRNAIPDYVCLRDIRKQITSGLETSDIQTYTSINKYEVPPAYS RLPLTSGRFGTDNFDFTPFNNTEYSGLDPDVDNHYTNAIIQLYRFIPEMFNFVVGCLKDE NFETTLLTDLGYLFDMMERSHGKICSSSNFQASLKSLTDKRQLENGEPQEHLEEYLESLC IRESIEDFNSSESIKRNMPQKFNRFLLSQLIKEEAQTVNHNITLNQCFGLETEIRTECSC DHYDTTVKLLPSLSISGINKTVIKQLNKKSNGQNILPYIEYAMKNVTQKNSICPTCGKTE TITQECTVKNLPSVLSLELSLLDTEFSNIRSSKNWLTSEFYGSIIKNKAVLRSTASELKG TSHIFKYELNGYVAKITDNNNETRLVTYVKKYNPKENCFKWLMFNDYLVVEITEEEALKM TYPWKTPEIIIYCDAEELRKPFFSVDTYSINYDILFRDYFANGIRDTARREYKLLTHDEA PKSGTLVAIDAEFVSLQSELCEIDHQGIRSIIRPKRTALARISIIRGEEGELYGVPFVDD YVVNTNHIEDYLTRYSGILPGDLDPEKSTKRLVRRNVVYRKVWLLMQLGCVFVGHGLNND FKHININVPRNQIRDTAIYFLQGKRYLSLRYLAYVLLGMNIQEGNHDSIEDAHTALILYK KYLHLKEKAIFEKVLNSVYEEGRAHNFKVPETSKG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YGL094C.fa Sequence name : YGL094C Sequence length : 1115 VALUES OF COMPUTED PARAMETERS Coef20 : 3.108 CoefTot : -1.183 ChDiff : -10 ZoneTo : 12 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.400 1.476 0.124 0.591 MesoH : -0.063 0.307 -0.259 0.232 MuHd_075 : 4.608 8.817 2.222 2.775 MuHd_095 : 32.538 19.168 10.287 5.961 MuHd_100 : 42.449 25.306 12.213 7.829 MuHd_105 : 43.989 25.789 11.696 8.103 Hmax_075 : -3.267 3.400 -4.075 2.952 Hmax_095 : 7.700 3.600 -1.760 3.510 Hmax_100 : 15.900 9.900 0.655 5.350 Hmax_105 : 18.100 12.600 0.910 6.170 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9798 0.0202 DFMC : 0.9771 0.0229
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1115 YGL094C MNNWQHFFNNPVDLSEHLKKPYFRFDNRDKEITAISFDEKANLIWSGDSYGCISSYDPTFQLYTRYRGHIGGNSVKDILS 80 HRDGILSISEDSLHFANRRGVTKLNLTSIDIAAFSELNTMCYSPHSLKNNIYCGGDNTNWGIASIDLNRGCLDSLLNYSS 160 KVKLMCSNNKVLSIGRQTGTVDLLDPTSNRTIKSFNAHSASISAMDLRDNTLVTVGKSKRFYNLYADPFVNVYDLRTMRQ 240 LPPVSFSKGTTMGSGGADFVQLHPLLPTVMIVASSSGSFDFIDLSNPTLRTQYVHPCQSIKKLCLSPNGDVLGILEADNH 320 LDTWRRSSNNMGMFTNTPEMLAYPDYFNDITSDGPISVDDETYPLSSVGMPYYLDKLLSAWPPVVFKSEGTIPQLTGKSP 400 LPSSGKLKSNLAVISSQNEKLSTQEFPLLRYDRTKYGMRNAIPDYVCLRDIRKQITSGLETSDIQTYTSINKYEVPPAYS 480 RLPLTSGRFGTDNFDFTPFNNTEYSGLDPDVDNHYTNAIIQLYRFIPEMFNFVVGCLKDENFETTLLTDLGYLFDMMERS 560 HGKICSSSNFQASLKSLTDKRQLENGEPQEHLEEYLESLCIRESIEDFNSSESIKRNMPQKFNRFLLSQLIKEEAQTVNH 640 NITLNQCFGLETEIRTECSCDHYDTTVKLLPSLSISGINKTVIKQLNKKSNGQNILPYIEYAMKNVTQKNSICPTCGKTE 720 TITQECTVKNLPSVLSLELSLLDTEFSNIRSSKNWLTSEFYGSIIKNKAVLRSTASELKGTSHIFKYELNGYVAKITDNN 800 NETRLVTYVKKYNPKENCFKWLMFNDYLVVEITEEEALKMTYPWKTPEIIIYCDAEELRKPFFSVDTYSINYDILFRDYF 880 ANGIRDTARREYKLLTHDEAPKSGTLVAIDAEFVSLQSELCEIDHQGIRSIIRPKRTALARISIIRGEEGELYGVPFVDD 960 YVVNTNHIEDYLTRYSGILPGDLDPEKSTKRLVRRNVVYRKVWLLMQLGCVFVGHGLNNDFKHININVPRNQIRDTAIYF 1040 LQGKRYLSLRYLAYVLLGMNIQEGNHDSIEDAHTALILYKKYLHLKEKAIFEKVLNSVYEEGRAHNFKVPETSKG 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 .......................................................P........................ 960 ................................................................................ 1040 ........................................................................... 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ YGL094C 19 DLSEHLK|KP 0.062 . YGL094C 20 LSEHLKK|PY 0.103 . YGL094C 24 LKKPYFR|FD 0.094 . YGL094C 28 YFRFDNR|DK 0.106 . YGL094C 30 RFDNRDK|EI 0.067 . YGL094C 40 AISFDEK|AN 0.064 . YGL094C 65 TFQLYTR|YR 0.123 . YGL094C 67 QLYTRYR|GH 0.107 . YGL094C 76 IGGNSVK|DI 0.078 . YGL094C 82 KDILSHR|DG 0.088 . YGL094C 98 SLHFANR|RG 0.097 . YGL094C 99 LHFANRR|GV 0.231 . YGL094C 103 NRRGVTK|LN 0.072 . YGL094C 128 YSPHSLK|NN 0.061 . YGL094C 149 ASIDLNR|GC 0.087 . YGL094C 161 LLNYSSK|VK 0.060 . YGL094C 163 NYSSKVK|LM 0.064 . YGL094C 170 LMCSNNK|VL 0.075 . YGL094C 176 KVLSIGR|QT 0.088 . YGL094C 190 LDPTSNR|TI 0.079 . YGL094C 193 TSNRTIK|SF 0.299 . YGL094C 208 ISAMDLR|DN 0.120 . YGL094C 217 TLVTVGK|SK 0.076 . YGL094C 219 VTVGKSK|RF 0.058 . YGL094C 220 TVGKSKR|FY 0.205 . YGL094C 236 VNVYDLR|TM 0.084 . YGL094C 239 YDLRTMR|QL 0.199 . YGL094C 248 PPVSFSK|GT 0.074 . YGL094C 290 LSNPTLR|TQ 0.097 . YGL094C 301 HPCQSIK|KL 0.068 . YGL094C 302 PCQSIKK|LC 0.071 . YGL094C 325 NHLDTWR|RS 0.092 . YGL094C 326 HLDTWRR|SS 0.207 . YGL094C 376 MPYYLDK|LL 0.080 . YGL094C 387 WPPVVFK|SE 0.104 . YGL094C 398 IPQLTGK|SP 0.075 . YGL094C 406 PLPSSGK|LK 0.057 . YGL094C 408 PSSGKLK|SN 0.128 . YGL094C 420 ISSQNEK|LS 0.074 . YGL094C 430 QEFPLLR|YD 0.087 . YGL094C 433 PLLRYDR|TK 0.208 . YGL094C 435 LRYDRTK|YG 0.068 . YGL094C 439 RTKYGMR|NA 0.087 . YGL094C 449 PDYVCLR|DI 0.146 . YGL094C 452 VCLRDIR|KQ 0.140 . YGL094C 453 CLRDIRK|QI 0.107 . YGL094C 472 TYTSINK|YE 0.053 . YGL094C 481 VPPAYSR|LP 0.069 . YGL094C 488 LPLTSGR|FG 0.105 . YGL094C 524 AIIQLYR|FI 0.117 . YGL094C 538 FVVGCLK|DE 0.058 . YGL094C 559 LFDMMER|SH 0.126 . YGL094C 563 MERSHGK|IC 0.077 . YGL094C 575 NFQASLK|SL 0.089 . YGL094C 580 LKSLTDK|RQ 0.066 . YGL094C 581 KSLTDKR|QL 0.307 . YGL094C 602 LESLCIR|ES 0.103 . YGL094C 615 NSSESIK|RN 0.075 . YGL094C 616 SSESIKR|NM 0.175 . YGL094C 621 KRNMPQK|FN 0.095 . YGL094C 624 MPQKFNR|FL 0.154 . YGL094C 632 LLSQLIK|EE 0.068 . YGL094C 655 GLETEIR|TE 0.077 . YGL094C 668 HYDTTVK|LL 0.052 . YGL094C 680 SISGINK|TV 0.104 . YGL094C 684 INKTVIK|QL 0.071 . YGL094C 688 VIKQLNK|KS 0.056 . YGL094C 689 IKQLNKK|SN 0.206 . YGL094C 704 YIEYAMK|NV 0.072 . YGL094C 709 MKNVTQK|NS 0.068 . YGL094C 718 ICPTCGK|TE 0.056 . YGL094C 729 TQECTVK|NL 0.066 . YGL094C 750 TEFSNIR|SS 0.114 . YGL094C 753 SNIRSSK|NW 0.223 . YGL094C 766 FYGSIIK|NK 0.053 . YGL094C 768 GSIIKNK|AV 0.099 . YGL094C 772 KNKAVLR|ST 0.151 . YGL094C 779 STASELK|GT 0.079 . YGL094C 786 GTSHIFK|YE 0.076 . YGL094C 795 LNGYVAK|IT 0.082 . YGL094C 804 DNNNETR|LV 0.126 . YGL094C 810 RLVTYVK|KY 0.073 . YGL094C 811 LVTYVKK|YN 0.098 . YGL094C 815 VKKYNPK|EN 0.068 . YGL094C 820 PKENCFK|WL 0.062 . YGL094C 839 TEEEALK|MT 0.066 . YGL094C 845 KMTYPWK|TP 0.067 . YGL094C 859 CDAEELR|KP 0.084 . YGL094C 860 DAEELRK|PF 0.071 . YGL094C 877 NYDILFR|DY 0.086 . YGL094C 885 YFANGIR|DT 0.091 . YGL094C 889 GIRDTAR|RE 0.099 . YGL094C 890 IRDTARR|EY 0.127 . YGL094C 893 TARREYK|LL 0.157 . YGL094C 902 THDEAPK|SG 0.069 . YGL094C 929 IDHQGIR|SI 0.124 . YGL094C 933 GIRSIIR|PK 0.100 . YGL094C 935 RSIIRPK|RT 0.066 . YGL094C 936 SIIRPKR|TA 0.557 *ProP* YGL094C 941 KRTALAR|IS 0.099 . YGL094C 946 ARISIIR|GE 0.122 . YGL094C 974 IEDYLTR|YS 0.104 . YGL094C 987 GDLDPEK|ST 0.069 . YGL094C 990 DPEKSTK|RL 0.060 . YGL094C 991 PEKSTKR|LV 0.176 . YGL094C 994 STKRLVR|RN 0.214 . YGL094C 995 TKRLVRR|NV 0.209 . YGL094C 1000 RRNVVYR|KV 0.164 . YGL094C 1001 RNVVYRK|VW 0.072 . YGL094C 1022 GLNNDFK|HI 0.077 . YGL094C 1030 ININVPR|NQ 0.086 . YGL094C 1034 VPRNQIR|DT 0.159 . YGL094C 1044 IYFLQGK|RY 0.053 . YGL094C 1045 YFLQGKR|YL 0.110 . YGL094C 1050 KRYLSLR|YL 0.131 . YGL094C 1080 TALILYK|KY 0.058 . YGL094C 1081 ALILYKK|YL 0.126 . YGL094C 1086 KKYLHLK|EK 0.065 . YGL094C 1088 YLHLKEK|AI 0.080 . YGL094C 1093 EKAIFEK|VL 0.069 . YGL094C 1103 SVYEEGR|AH 0.083 . YGL094C 1108 GRAHNFK|VP 0.081 . YGL094C 1114 KVPETSK|G- 0.062 . ____________________________^_________________

  • Fasta :-

    >YGL094C ATGAATAATTGGCAACATTTCTTCAACAATCCAGTTGATCTTTCGGAACATTTGAAGAAG CCATACTTTCGCTTCGATAATAGGGATAAGGAAATTACAGCGATTAGCTTCGATGAGAAG GCAAACTTAATTTGGAGTGGAGACAGCTATGGTTGCATTTCGTCATATGATCCAACTTTT CAACTTTATACAAGATATAGGGGCCACATAGGTGGAAATTCCGTGAAGGATATTCTCAGT CATCGGGATGGTATTTTATCTATTAGTGAAGATTCCTTACACTTTGCTAATAGAAGAGGT GTTACTAAATTGAACCTCACTAGCATTGATATTGCTGCATTTAGCGAATTGAACACTATG TGCTATTCTCCTCATTCACTGAAAAACAATATCTACTGTGGTGGTGACAACACAAATTGG GGAATTGCGTCCATTGACTTGAACAGAGGTTGCTTAGATTCCCTCTTGAATTACTCATCT AAAGTGAAGTTAATGTGCTCTAATAATAAAGTTTTGTCTATCGGAAGACAAACAGGGACT GTGGATTTGCTAGATCCAACATCGAATCGTACTATCAAATCATTTAATGCACACTCTGCA TCCATATCCGCTATGGATTTACGGGATAACACCTTGGTTACAGTAGGGAAGTCCAAAAGA TTTTATAACTTATACGCTGACCCATTTGTGAATGTTTACGACTTGAGAACAATGCGTCAA CTCCCTCCTGTTTCCTTTTCTAAAGGAACAACTATGGGATCTGGAGGCGCAGATTTTGTT CAATTACATCCTTTGCTTCCTACTGTTATGATCGTCGCCTCAAGTTCTGGTTCGTTTGAT TTCATCGACCTTTCCAATCCAACTTTAAGAACACAATATGTTCATCCTTGCCAGTCGATT AAAAAGTTATGTTTGTCCCCCAATGGTGACGTATTGGGTATACTAGAAGCTGATAATCAC CTAGATACATGGAGAAGATCATCAAACAACATGGGAATGTTTACCAATACCCCTGAAATG CTAGCATATCCTGATTATTTTAATGACATTACCTCTGACGGCCCAATATCTGTCGACGAT GAAACATATCCATTGAGTTCTGTGGGGATGCCGTACTATCTTGATAAACTTTTGTCTGCA TGGCCCCCTGTAGTGTTTAAAAGTGAAGGTACCATACCGCAATTAACAGGTAAGTCACCC TTACCATCGAGCGGCAAATTAAAAAGTAACCTTGCTGTGATCTCGAGCCAAAATGAGAAG TTGAGCACACAAGAATTTCCTTTGTTAAGATATGATCGCACCAAATACGGTATGAGAAAT GCTATACCAGATTACGTTTGTCTAAGAGATATAAGGAAACAGATAACAAGCGGTTTAGAA ACCAGCGATATACAGACATATACCTCAATCAACAAGTACGAAGTACCCCCTGCATACAGT AGACTTCCACTGACATCAGGTAGATTTGGTACTGATAATTTTGATTTTACGCCCTTTAAT AACACTGAGTATTCAGGATTGGATCCAGATGTTGATAATCACTACACAAATGCTATCATA CAATTGTATCGCTTTATTCCAGAAATGTTTAATTTCGTTGTTGGGTGTTTGAAAGACGAG AATTTTGAAACAACGTTGCTAACTGATCTAGGCTACCTCTTTGACATGATGGAAAGATCA CATGGAAAAATATGTAGTTCTTCCAATTTTCAGGCGTCATTGAAATCCTTAACTGATAAA AGACAATTAGAAAACGGTGAACCACAAGAACATTTAGAAGAGTATTTAGAATCGCTGTGC ATAAGGGAAAGTATCGAGGATTTTAATTCTTCTGAAAGTATTAAACGCAATATGCCTCAA AAATTTAACAGATTCCTGCTCTCGCAACTTATTAAAGAGGAAGCGCAGACAGTCAACCAT AATATCACCCTAAATCAATGCTTTGGTTTGGAAACGGAAATACGAACAGAGTGTAGCTGT GATCACTACGACACTACCGTCAAACTTCTACCCTCCTTATCAATATCAGGAATCAACAAA ACCGTAATCAAACAATTGAACAAGAAAAGCAATGGACAGAATATTTTGCCTTATATTGAA TATGCCATGAAAAATGTAACCCAAAAGAACAGTATTTGCCCAACCTGCGGCAAAACCGAA ACTATCACCCAGGAGTGTACTGTCAAGAATTTACCTTCAGTGTTGTCATTAGAATTATCA CTATTAGATACCGAATTTTCCAATATAAGGTCGTCGAAAAACTGGTTAACTAGTGAATTT TATGGAAGCATCATTAAAAACAAGGCAGTTCTAAGATCGACGGCGTCCGAATTGAAGGGC ACAAGCCACATATTTAAATACGAATTGAATGGTTACGTGGCTAAAATCACTGATAACAAT AACGAGACGCGTCTAGTAACATATGTCAAAAAATATAATCCAAAAGAGAATTGCTTCAAG TGGCTCATGTTTAATGATTATTTGGTTGTTGAGATAACAGAGGAAGAGGCGCTTAAAATG ACATACCCTTGGAAAACACCAGAAATTATCATATATTGTGATGCGGAAGAATTACGAAAA CCTTTCTTTTCTGTTGATACGTATTCCATCAACTATGACATACTTTTCCGTGATTATTTC GCAAACGGAATAAGAGATACTGCAAGACGTGAATATAAGTTATTAACACATGATGAGGCA CCTAAATCTGGAACCTTGGTTGCCATTGATGCCGAATTTGTCTCATTACAAAGTGAACTA TGTGAAATCGATCATCAAGGAATCAGAAGTATTATTCGACCTAAAAGAACTGCTTTGGCC AGAATATCCATTATTAGAGGCGAAGAAGGAGAACTGTATGGAGTACCATTTGTCGATGAT TATGTGGTAAACACGAACCACATAGAAGACTATTTGACAAGATATAGTGGGATTCTTCCT GGTGACTTGGACCCTGAAAAGAGTACCAAAAGGCTTGTGAGAAGAAACGTTGTATATCGA AAAGTCTGGCTTTTAATGCAGCTCGGATGCGTATTTGTTGGTCATGGTTTGAATAATGAC TTCAAACACATTAATATTAATGTCCCAAGAAACCAAATTCGCGACACTGCCATATATTTT CTACAAGGAAAGAGATATCTTTCATTGCGTTATCTGGCATATGTGTTGTTAGGAATGAAT ATCCAAGAGGGAAATCACGATTCAATTGAAGATGCCCATACTGCCTTGATTCTTTACAAA AAATATCTCCACCTGAAAGAAAAAGCTATCTTTGAGAAAGTACTGAACAGCGTGTACGAA GAAGGAAGAGCCCATAATTTCAAAGTTCCAGAAACTTCAAAGGGATAA
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  • Fasta :-

    MNNWQHFFNNPVDLSEHLKKPYFRFDNRDKEITAISFDEKANLIWSGDSYGCISSYDPTF QLYTRYRGHIGGNSVKDILSHRDGILSISEDSLHFANRRGVTKLNLTSIDIAAFSELNTM CYSPHSLKNNIYCGGDNTNWGIASIDLNRGCLDSLLNYSSKVKLMCSNNKVLSIGRQTGT VDLLDPTSNRTIKSFNAHSASISAMDLRDNTLVTVGKSKRFYNLYADPFVNVYDLRTMRQ LPPVSFSKGTTMGSGGADFVQLHPLLPTVMIVASSSGSFDFIDLSNPTLRTQYVHPCQSI KKLCLSPNGDVLGILEADNHLDTWRRSSNNMGMFTNTPEMLAYPDYFNDITSDGPISVDD ETYPLSSVGMPYYLDKLLSAWPPVVFKSEGTIPQLTGKSPLPSSGKLKSNLAVISSQNEK LSTQEFPLLRYDRTKYGMRNAIPDYVCLRDIRKQITSGLETSDIQTYTSINKYEVPPAYS RLPLTSGRFGTDNFDFTPFNNTEYSGLDPDVDNHYTNAIIQLYRFIPEMFNFVVGCLKDE NFETTLLTDLGYLFDMMERSHGKICSSSNFQASLKSLTDKRQLENGEPQEHLEEYLESLC IRESIEDFNSSESIKRNMPQKFNRFLLSQLIKEEAQTVNHNITLNQCFGLETEIRTECSC DHYDTTVKLLPSLSISGINKTVIKQLNKKSNGQNILPYIEYAMKNVTQKNSICPTCGKTE TITQECTVKNLPSVLSLELSLLDTEFSNIRSSKNWLTSEFYGSIIKNKAVLRSTASELKG TSHIFKYELNGYVAKITDNNNETRLVTYVKKYNPKENCFKWLMFNDYLVVEITEEEALKM TYPWKTPEIIIYCDAEELRKPFFSVDTYSINYDILFRDYFANGIRDTARREYKLLTHDEA PKSGTLVAIDAEFVSLQSELCEIDHQGIRSIIRPKRTALARISIIRGEEGELYGVPFVDD YVVNTNHIEDYLTRYSGILPGDLDPEKSTKRLVRRNVVYRKVWLLMQLGCVFVGHGLNND FKHININVPRNQIRDTAIYFLQGKRYLSLRYLAYVLLGMNIQEGNHDSIEDAHTALILYK KYLHLKEKAIFEKVLNSVYEEGRAHNFKVPETSKG

  • title: active site
  • coordinates: D910,A911,E912,F913,S915,L972,S976,H1015,G1016,N1018,N1019,D1020,H1066,D1071
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YGL094C357 SDGPISVDDE0.995unspYGL094C357 SDGPISVDDE0.995unspYGL094C357 SDGPISVDDE0.995unspYGL094C604 SCIRESIEDF0.992unspYGL094C613 SNSSESIKRN0.996unspYGL094C80 SKDILSHRDG0.994unspYGL094C126 SYSPHSLKNN0.991unsp

YGL094C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India