YJL172W | Gly-Xaa carboxypeptidase

_IDPredictionOTHERSPmTPCS_Position
YJL172WOTHER0.7033920.2519290.044679
No Results

  • Fasta :-

    >YJL172W MIALPVEKAPRKSLWQRHRAFISGIVALIIIGTFFLTSGLHPAPPHEAKRPHHGKGPMHS PKCEKIEPLSPSFKHSVDTILHDPAFRNSSIEKLSNAVRIPTVVQDKNPNPADDPDFYKH FYELHDYFEKTFPNIHKHLKLEKVNELGLLYTWEGSDPDLKPLLLMAHQDVVPVNNETLS SWKFPPFSGHYDPETDFVWGRGSNDCKNLLIAEFEAIEQLLIDGFKPNRTIVMSLGFDEE ASGTLGAASLASFLHERYGDDGIYSIIDEGEGIMEVDKDVFVATPINAEKGYVDFEVSIL GHGGHSSVPPDHTTIGIASELITEFEANPFDYEFEFDNPIYGLLTCAAEHSKSLSKDVKK TILGAPFCPRRKDKLVEYISNQSHLRSLIRTTQAVDIINGGVKANALPETTRFLINHRIN LHSSVAEVFERNIEYAKKIAEKYGYGLSKNGDDYIIPETELGHIDITLLRELEPAPLSPS SGPVWDILAGTIQDVFENGVLQNNEEFYVTTGLFSGNTDTKYYWNLSKNIYRFVGSIIDI DLLKTLHSVNEHVDVPGHLSAIAFVYEYIVNVNEYA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YJL172W.fa Sequence name : YJL172W Sequence length : 576 VALUES OF COMPUTED PARAMETERS Coef20 : 4.216 CoefTot : -3.450 ChDiff : -29 ZoneTo : 63 KR : 9 DE : 2 CleavSite : 19 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.459 2.588 0.515 0.934 MesoH : -0.661 0.215 -0.435 0.251 MuHd_075 : 41.116 22.604 9.758 7.748 MuHd_095 : 33.248 20.968 9.692 7.612 MuHd_100 : 25.626 20.031 8.914 7.183 MuHd_105 : 18.522 13.299 7.141 5.886 Hmax_075 : 12.017 27.183 -0.308 4.538 Hmax_095 : -1.225 21.100 -1.281 2.320 Hmax_100 : -0.700 20.700 -0.737 7.200 Hmax_105 : 6.300 3.700 -0.862 6.910 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9422 0.0578 DFMC : 0.9696 0.0304
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 576 YJL172W MIALPVEKAPRKSLWQRHRAFISGIVALIIIGTFFLTSGLHPAPPHEAKRPHHGKGPMHSPKCEKIEPLSPSFKHSVDTI 80 LHDPAFRNSSIEKLSNAVRIPTVVQDKNPNPADDPDFYKHFYELHDYFEKTFPNIHKHLKLEKVNELGLLYTWEGSDPDL 160 KPLLLMAHQDVVPVNNETLSSWKFPPFSGHYDPETDFVWGRGSNDCKNLLIAEFEAIEQLLIDGFKPNRTIVMSLGFDEE 240 ASGTLGAASLASFLHERYGDDGIYSIIDEGEGIMEVDKDVFVATPINAEKGYVDFEVSILGHGGHSSVPPDHTTIGIASE 320 LITEFEANPFDYEFEFDNPIYGLLTCAAEHSKSLSKDVKKTILGAPFCPRRKDKLVEYISNQSHLRSLIRTTQAVDIING 400 GVKANALPETTRFLINHRINLHSSVAEVFERNIEYAKKIAEKYGYGLSKNGDDYIIPETELGHIDITLLRELEPAPLSPS 480 SGPVWDILAGTIQDVFENGVLQNNEEFYVTTGLFSGNTDTKYYWNLSKNIYRFVGSIIDIDLLKTLHSVNEHVDVPGHLS 560 AIAFVYEYIVNVNEYA 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YJL172W 8 IALPVEK|AP 0.067 . YJL172W 11 PVEKAPR|KS 0.084 . YJL172W 12 VEKAPRK|SL 0.121 . YJL172W 17 RKSLWQR|HR 0.106 . YJL172W 19 SLWQRHR|AF 0.118 . YJL172W 49 APPHEAK|RP 0.072 . YJL172W 50 PPHEAKR|PH 0.311 . YJL172W 55 KRPHHGK|GP 0.092 . YJL172W 62 GPMHSPK|CE 0.077 . YJL172W 65 HSPKCEK|IE 0.055 . YJL172W 74 PLSPSFK|HS 0.073 . YJL172W 87 LHDPAFR|NS 0.079 . YJL172W 93 RNSSIEK|LS 0.071 . YJL172W 99 KLSNAVR|IP 0.096 . YJL172W 107 PTVVQDK|NP 0.059 . YJL172W 119 DDPDFYK|HF 0.063 . YJL172W 130 LHDYFEK|TF 0.059 . YJL172W 137 TFPNIHK|HL 0.064 . YJL172W 140 NIHKHLK|LE 0.065 . YJL172W 143 KHLKLEK|VN 0.063 . YJL172W 161 GSDPDLK|PL 0.056 . YJL172W 183 ETLSSWK|FP 0.058 . YJL172W 201 TDFVWGR|GS 0.109 . YJL172W 207 RGSNDCK|NL 0.078 . YJL172W 226 LLIDGFK|PN 0.069 . YJL172W 229 DGFKPNR|TI 0.081 . YJL172W 257 ASFLHER|YG 0.125 . YJL172W 278 GIMEVDK|DV 0.098 . YJL172W 290 TPINAEK|GY 0.078 . YJL172W 352 CAAEHSK|SL 0.089 . YJL172W 356 HSKSLSK|DV 0.091 . YJL172W 359 SLSKDVK|KT 0.074 . YJL172W 360 LSKDVKK|TI 0.120 . YJL172W 370 GAPFCPR|RK 0.086 . YJL172W 371 APFCPRR|KD 0.124 . YJL172W 372 PFCPRRK|DK 0.073 . YJL172W 374 CPRRKDK|LV 0.354 . YJL172W 386 SNQSHLR|SL 0.141 . YJL172W 390 HLRSLIR|TT 0.095 . YJL172W 403 IINGGVK|AN 0.064 . YJL172W 412 ALPETTR|FL 0.090 . YJL172W 418 RFLINHR|IN 0.069 . YJL172W 431 VAEVFER|NI 0.101 . YJL172W 437 RNIEYAK|KI 0.066 . YJL172W 438 NIEYAKK|IA 0.143 . YJL172W 442 AKKIAEK|YG 0.063 . YJL172W 449 YGYGLSK|NG 0.067 . YJL172W 470 IDITLLR|EL 0.092 . YJL172W 521 SGNTDTK|YY 0.067 . YJL172W 528 YYWNLSK|NI 0.065 . YJL172W 532 LSKNIYR|FV 0.220 . YJL172W 544 IDIDLLK|TL 0.064 . ____________________________^_________________

  • Fasta :-

    >YJL172W ATGATCGCCTTACCAGTAGAGAAGGCCCCTAGAAAGTCCCTATGGCAAAGGCACAGAGCC TTTATTAGTGGAATAGTTGCCCTTATTATCATCGGCACCTTCTTCCTCACTTCGGGTCTC CACCCAGCACCACCTCATGAGGCAAAGCGTCCACACCATGGAAAAGGTCCCATGCACTCA CCCAAATGTGAGAAGATTGAACCATTAAGTCCATCATTCAAACATTCCGTCGACACAATT CTTCATGACCCTGCCTTTAGAAACAGCTCCATTGAGAAACTGTCCAATGCTGTTAGAATC CCCACTGTAGTCCAAGACAAAAACCCCAACCCCGCAGATGATCCGGATTTCTATAAGCAT TTTTATGAACTACACGACTATTTTGAGAAGACTTTCCCTAATATTCACAAGCATTTGAAA TTGGAGAAAGTCAATGAGCTGGGTCTTCTATACACATGGGAAGGTTCTGATCCTGATCTA AAACCATTATTGTTAATGGCCCATCAAGATGTTGTACCTGTAAACAACGAAACTTTATCA TCCTGGAAGTTCCCTCCATTTTCTGGTCACTATGATCCAGAAACAGATTTTGTTTGGGGG CGTGGTTCTAACGATTGTAAGAACTTGTTAATTGCCGAGTTTGAAGCTATCGAACAACTG TTGATAGATGGATTCAAGCCCAACAGAACTATTGTTATGTCGCTTGGTTTTGATGAAGAA GCAAGCGGCACCCTCGGTGCTGCCAGCTTAGCCTCATTTCTTCACGAAAGATATGGTGAT GATGGTATTTACAGTATCATTGACGAGGGTGAAGGTATCATGGAAGTCGACAAGGATGTC TTTGTTGCCACTCCAATCAACGCTGAAAAAGGCTATGTCGACTTCGAAGTCAGTATTCTA GGCCATGGTGGTCATTCCTCTGTCCCACCTGATCATACCACAATCGGTATCGCTTCAGAA CTGATTACTGAATTTGAAGCCAACCCATTTGACTACGAATTTGAGTTTGACAATCCAATC TATGGATTGTTGACATGTGCTGCTGAACATTCTAAATCTTTAAGTAAGGATGTGAAGAAG ACAATTTTGGGCGCACCATTCTGTCCTAGAAGGAAGGACAAGCTTGTTGAGTACATTTCC AACCAATCACATTTGCGCAGCTTAATAAGAACAACACAAGCTGTTGATATCATCAATGGT GGTGTTAAAGCTAATGCTCTGCCCGAAACTACCAGATTCTTGATCAATCACAGAATTAAT TTACATTCTTCTGTGGCTGAAGTCTTTGAAAGAAACATAGAATATGCGAAAAAGATTGCT GAGAAGTATGGCTATGGTTTATCTAAGAACGGTGACGATTACATTATCCCTGAAACCGAG TTAGGTCACATTGACATTACTCTCTTGAGAGAATTGGAACCAGCACCACTTTCGCCAAGT TCAGGCCCTGTTTGGGACATTTTGGCAGGTACTATTCAAGATGTTTTTGAAAACGGTGTT CTACAAAACAACGAAGAGTTCTATGTGACTACTGGTTTATTCTCTGGTAACACCGATACT AAATACTACTGGAATTTGTCCAAGAACATTTATAGGTTTGTTGGCTCTATCATTGATATT GATTTACTGAAGACATTGCATTCGGTTAATGAACACGTGGATGTCCCAGGTCATTTATCT GCCATTGCCTTTGTTTACGAGTATATCGTTAATGTTAACGAATACGCTTAA
  • Download Fasta

  • Fasta :-

    MIALPVEKAPRKSLWQRHRAFISGIVALIIIGTFFLTSGLHPAPPHEAKRPHHGKGPMHS PKCEKIEPLSPSFKHSVDTILHDPAFRNSSIEKLSNAVRIPTVVQDKNPNPADDPDFYKH FYELHDYFEKTFPNIHKHLKLEKVNELGLLYTWEGSDPDLKPLLLMAHQDVVPVNNETLS SWKFPPFSGHYDPETDFVWGRGSNDCKNLLIAEFEAIEQLLIDGFKPNRTIVMSLGFDEE ASGTLGAASLASFLHERYGDDGIYSIIDEGEGIMEVDKDVFVATPINAEKGYVDFEVSIL GHGGHSSVPPDHTTIGIASELITEFEANPFDYEFEFDNPIYGLLTCAAEHSKSLSKDVKK TILGAPFCPRRKDKLVEYISNQSHLRSLIRTTQAVDIINGGVKANALPETTRFLINHRIN LHSSVAEVFERNIEYAKKIAEKYGYGLSKNGDDYIIPETELGHIDITLLRELEPAPLSPS SGPVWDILAGTIQDVFENGVLQNNEEFYVTTGLFSGNTDTKYYWNLSKNIYRFVGSIIDI DLLKTLHSVNEHVDVPGHLSAIAFVYEYIVNVNEYA

  • title: metal binding site
  • coordinates: H168,D205,E239,E240,D268,H547
No Results
No Results
IDSitePeptideScoreMethod
YJL172W60 SGPMHSPKCE0.996unsp

YJL172W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India