_IDPredictionOTHERSPmTPCS_Position
YKL100COTHER0.9998500.0000420.000107
No Results
  • Fasta :-

    >YKL100C MDKYLNSFVDHLSEWSSRAFRNNSSSANQSASNKELEQVFEQINAIVENHNNKLTTAFDK ISYRVAHKITHLVESHSLVFNYATLVLIASALVVIGSFTSISSIPFTALPPTREHSLFDP TDFDVDHDCHVIYRENDEDKKKKKKSKRFFDMMDEKHAIILPLTSGCTLLALYFVIKKLH LNWLKYVVKILNFNITLLNIPAGTFVYSYFLNSLFRNLSHLASWNPLVVLPRYRVTIADD NEDLNKIGGFVTNLNYKDGLTNSVVHKKTLDEIEKDHWMKHFYRRELVEPKDIKSKRQIS NMYLNSALIVSFVLSIVSTVYFYLSPNDWLISNAVSMNMAIWSIAQLKLKNLKSGALILI ALFFYDICFVFGTDVMVTVATNLDIPVKLSLPVKFNTAQNNFNFSILGLGDIALPGMFIA MCYKYDIWKWHLDHDDTEFHFLNWSYVGKYFITAMVSYVASLVSAMVSLSIFNTAQPALL YIVPSLLISTILVACWNKDFKQFWNFQYDTIEVDKSLKKAIEKKENSITYSTFILSEYYN DADKYALLGDDVNENFDDDEEFVQEEDLSDSSEEELSEEDLLDDESS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YKL100C.fa Sequence name : YKL100C Sequence length : 587 VALUES OF COMPUTED PARAMETERS Coef20 : 3.991 CoefTot : 0.000 ChDiff : -20 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.141 2.424 0.493 0.869 MesoH : 0.782 1.214 -0.042 0.488 MuHd_075 : 6.581 4.560 1.239 2.408 MuHd_095 : 56.653 31.390 14.608 10.468 MuHd_100 : 45.650 28.163 11.618 9.418 MuHd_105 : 25.552 20.456 6.564 6.505 Hmax_075 : -7.817 2.333 -4.606 2.345 Hmax_095 : 15.200 14.400 2.025 5.220 Hmax_100 : 17.800 14.800 1.536 5.770 Hmax_105 : 8.000 12.100 -0.648 5.050 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7010 0.2990 DFMC : 0.8959 0.1041
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 587 YKL100C MDKYLNSFVDHLSEWSSRAFRNNSSSANQSASNKELEQVFEQINAIVENHNNKLTTAFDKISYRVAHKITHLVESHSLVF 80 NYATLVLIASALVVIGSFTSISSIPFTALPPTREHSLFDPTDFDVDHDCHVIYRENDEDKKKKKKSKRFFDMMDEKHAII 160 LPLTSGCTLLALYFVIKKLHLNWLKYVVKILNFNITLLNIPAGTFVYSYFLNSLFRNLSHLASWNPLVVLPRYRVTIADD 240 NEDLNKIGGFVTNLNYKDGLTNSVVHKKTLDEIEKDHWMKHFYRRELVEPKDIKSKRQISNMYLNSALIVSFVLSIVSTV 320 YFYLSPNDWLISNAVSMNMAIWSIAQLKLKNLKSGALILIALFFYDICFVFGTDVMVTVATNLDIPVKLSLPVKFNTAQN 400 NFNFSILGLGDIALPGMFIAMCYKYDIWKWHLDHDDTEFHFLNWSYVGKYFITAMVSYVASLVSAMVSLSIFNTAQPALL 480 YIVPSLLISTILVACWNKDFKQFWNFQYDTIEVDKSLKKAIEKKENSITYSTFILSEYYNDADKYALLGDDVNENFDDDE 560 EFVQEEDLSDSSEEELSEEDLLDDESS 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YKL100C 3 ----MDK|YL 0.070 . YKL100C 18 LSEWSSR|AF 0.087 . YKL100C 21 WSSRAFR|NN 0.396 . YKL100C 34 NQSASNK|EL 0.100 . YKL100C 53 VENHNNK|LT 0.066 . YKL100C 60 LTTAFDK|IS 0.063 . YKL100C 64 FDKISYR|VA 0.136 . YKL100C 68 SYRVAHK|IT 0.075 . YKL100C 113 TALPPTR|EH 0.099 . YKL100C 134 DCHVIYR|EN 0.089 . YKL100C 140 RENDEDK|KK 0.065 . YKL100C 141 ENDEDKK|KK 0.077 . YKL100C 142 NDEDKKK|KK 0.090 . YKL100C 143 DEDKKKK|KK 0.142 . YKL100C 144 EDKKKKK|KS 0.132 . YKL100C 145 DKKKKKK|SK 0.163 . YKL100C 147 KKKKKSK|RF 0.086 . YKL100C 148 KKKKSKR|FF 0.355 . YKL100C 156 FDMMDEK|HA 0.070 . YKL100C 177 ALYFVIK|KL 0.060 . YKL100C 178 LYFVIKK|LH 0.069 . YKL100C 185 LHLNWLK|YV 0.079 . YKL100C 189 WLKYVVK|IL 0.065 . YKL100C 216 FLNSLFR|NL 0.094 . YKL100C 232 PLVVLPR|YR 0.090 . YKL100C 234 VVLPRYR|VT 0.073 . YKL100C 246 DNEDLNK|IG 0.062 . YKL100C 257 VTNLNYK|DG 0.062 . YKL100C 267 TNSVVHK|KT 0.084 . YKL100C 268 NSVVHKK|TL 0.189 . YKL100C 275 TLDEIEK|DH 0.062 . YKL100C 280 EKDHWMK|HF 0.071 . YKL100C 284 WMKHFYR|RE 0.080 . YKL100C 285 MKHFYRR|EL 0.158 . YKL100C 291 RELVEPK|DI 0.074 . YKL100C 294 VEPKDIK|SK 0.079 . YKL100C 296 PKDIKSK|RQ 0.057 . YKL100C 297 KDIKSKR|QI 0.330 . YKL100C 348 WSIAQLK|LK 0.059 . YKL100C 350 IAQLKLK|NL 0.064 . YKL100C 353 LKLKNLK|SG 0.070 . YKL100C 388 NLDIPVK|LS 0.059 . YKL100C 394 KLSLPVK|FN 0.080 . YKL100C 424 FIAMCYK|YD 0.064 . YKL100C 429 YKYDIWK|WH 0.065 . YKL100C 449 NWSYVGK|YF 0.093 . YKL100C 498 LVACWNK|DF 0.067 . YKL100C 501 CWNKDFK|QF 0.066 . YKL100C 515 DTIEVDK|SL 0.080 . YKL100C 518 EVDKSLK|KA 0.062 . YKL100C 519 VDKSLKK|AI 0.152 . YKL100C 523 LKKAIEK|KE 0.060 . YKL100C 524 KKAIEKK|EN 0.140 . YKL100C 544 YYNDADK|YA 0.064 . ____________________________^_________________
  • Fasta :-

    >YKL100C ATGGACAAGTATTTGAATTCATTTGTTGACCACCTTTCAGAGTGGTCATCTCGTGCCTTT AGGAACAATTCATCAAGCGCTAACCAAAGTGCGTCGAACAAGGAATTAGAACAAGTTTTT GAACAGATCAATGCTATAGTTGAAAACCACAATAACAAATTAACCACTGCCTTTGATAAG ATATCATATCGCGTTGCTCACAAGATTACACACTTGGTGGAAAGCCATTCTTTAGTATTC AACTACGCCACTTTAGTTCTCATCGCAAGTGCTTTGGTCGTTATTGGCTCATTTACGTCT ATTTCTTCTATTCCATTTACAGCTCTACCTCCTACGAGAGAACACTCATTGTTTGATCCT ACAGATTTTGATGTGGACCACGACTGTCATGTTATCTACCGCGAGAATGACGAAGATAAA AAGAAAAAGAAGAAAAGCAAGAGGTTTTTCGATATGATGGATGAAAAACATGCGATTATA CTGCCCTTAACTAGTGGCTGTACTTTACTCGCTCTCTATTTTGTGATCAAGAAACTACAC CTAAACTGGCTAAAATATGTGGTGAAAATTTTGAATTTTAATATAACACTGCTAAATATC CCAGCTGGCACATTTGTCTACTCCTACTTTCTCAACTCACTTTTCAGAAACCTATCACAT TTAGCTTCTTGGAATCCCCTGGTTGTTTTACCAAGGTATCGTGTAACAATAGCTGATGAT AACGAAGACCTGAACAAGATAGGCGGGTTTGTTACCAATTTGAATTACAAAGATGGATTG ACCAACTCAGTTGTTCACAAGAAAACATTGGATGAGATTGAAAAAGATCATTGGATGAAG CATTTTTACAGAAGAGAATTAGTTGAACCGAAGGATATTAAATCGAAGAGGCAGATCAGC AACATGTATTTGAATAGCGCATTAATTGTTTCGTTCGTTCTGTCCATCGTTTCTACCGTA TATTTCTATTTATCACCCAATGATTGGTTAATATCCAATGCTGTCAGTATGAATATGGCT ATTTGGTCCATTGCTCAATTAAAATTGAAGAATTTAAAATCAGGGGCCCTAATCCTAATT GCTCTATTTTTTTACGACATTTGCTTTGTCTTTGGTACCGATGTAATGGTTACAGTAGCT ACTAACCTTGATATTCCCGTAAAACTAAGCTTACCAGTCAAGTTTAATACAGCTCAAAAC AACTTCAATTTTTCAATACTTGGTCTGGGTGATATTGCCTTGCCTGGTATGTTTATTGCG ATGTGCTACAAATATGACATCTGGAAGTGGCACCTTGATCATGATGACACTGAATTCCAC TTTTTGAACTGGTCATACGTTGGAAAATATTTTATTACTGCTATGGTTAGTTACGTTGCT TCTTTGGTATCTGCCATGGTCTCCTTGTCCATTTTCAATACTGCTCAACCGGCTTTATTA TACATTGTTCCTTCCTTGTTGATTAGTACTATTTTGGTAGCTTGCTGGAACAAGGATTTT AAGCAGTTTTGGAATTTTCAGTATGATACGATTGAAGTGGATAAAAGTTTAAAAAAAGCG ATAGAAAAAAAGGAGAACTCTATAACTTATTCGACCTTCATCCTATCAGAATACTATAAT GATGCCGACAAGTATGCCTTGCTTGGTGATGATGTAAACGAAAATTTTGACGATGATGAA GAATTCGTGCAAGAGGAAGATCTCAGTGACAGCTCTGAGGAAGAGCTTTCTGAAGAAGAT CTCTTGGATGACGAATCTTCTTGA
  • Download Fasta
  • Fasta :-

    MDKYLNSFVDHLSEWSSRAFRNNSSSANQSASNKELEQVFEQINAIVENHNNKLTTAFDK ISYRVAHKITHLVESHSLVFNYATLVLIASALVVIGSFTSISSIPFTALPPTREHSLFDP TDFDVDHDCHVIYRENDEDKKKKKKSKRFFDMMDEKHAIILPLTSGCTLLALYFVIKKLH LNWLKYVVKILNFNITLLNIPAGTFVYSYFLNSLFRNLSHLASWNPLVVLPRYRVTIADD NEDLNKIGGFVTNLNYKDGLTNSVVHKKTLDEIEKDHWMKHFYRRELVEPKDIKSKRQIS NMYLNSALIVSFVLSIVSTVYFYLSPNDWLISNAVSMNMAIWSIAQLKLKNLKSGALILI ALFFYDICFVFGTDVMVTVATNLDIPVKLSLPVKFNTAQNNFNFSILGLGDIALPGMFIA MCYKYDIWKWHLDHDDTEFHFLNWSYVGKYFITAMVSYVASLVSAMVSLSIFNTAQPALL YIVPSLLISTILVACWNKDFKQFWNFQYDTIEVDKSLKKAIEKKENSITYSTFILSEYYN DADKYALLGDDVNENFDDDEEFVQEEDLSDSSEEELSEEDLLDDESS

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YKL100C146 SKKKKSKRFF0.996unspYKL100C146 SKKKKSKRFF0.996unspYKL100C146 SKKKKSKRFF0.996unspYKL100C516 SEVDKSLKKA0.993unspYKL100C571 SDLSDSSEEE0.996unspYKL100C572 SLSDSSEEEL0.997unspYKL100C577 SEEELSEEDL0.997unspYKL100C32 SNQSASNKEL0.996unspYKL100C116 STREHSLFDP0.996unsp

YKL100C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India