YLL029W | Fra1p

_IDPredictionOTHERSPmTPCS_Position
YLL029WOTHER0.9999530.0000230.000024
No Results

  • Fasta :-

    >YLL029W MTSKPSTSDGRAHSISHVPGTHMRGTSASHSPRPFRPCADCTCSPGLLSRQGRRASLFLR QLENSRRSSSMLLNELKGAGGGSSAGNGSVYSCDSLCAVNREVNTTDRLLKLRQEMKKHD LCCYIVPSCDEHQSEYVSLRDQRRAFISGFSGSAGVACITRDLLNFNDDHPDGKSILSTD GRYFNQARQELDYNWTLLRQNEDPITWQEWCVREALEMAKGLGNKEGMVLKIGIDPKLIT FNDYVSFRKMIDTKYDAKGKVELVPVEENLVDSIWPDFETLPERPCNDLLLLKYEFHGEE FKDKKEKLLKKLNDKASSATTGRNTFIVVALDEICWLLNLRGSDIDYNPVFFSYVAINED ETILFTNNPFNDDISEYFKINGIEVRPYEQIWEHLTKITSQASSAEHEFLIPDSASWQMV RCLNTSTNANGAIAKKMTAQNFAIIHSPIDVLKSIKNDIEIKNAHKAQVKDAVCLVQYFA WLEQQLVGREALIDEYRAAEKLTEIRKTQRNFMGNSFETISSTGSNAAIIHYSPPVENSS MIDPTKIYLCDSGSQFLEGTTDITRTIHLTKPTKEEMDNYTLVLKGGLALERLIFPENTP GFNIDAIARQFLWSRGLDYKHGTGHGIGSFLNVHEGPMGVGFRPHLMNFPLRAGNIISNE PGYYKDGEYGIRIESDMLIKKATEKGNFLKFENMTVVPYCRKLINTKLLNEEEKTQINEY HARVWRTIVHFLQPQSISYKWLKRETSPL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YLL029W.fa Sequence name : YLL029W Sequence length : 749 VALUES OF COMPUTED PARAMETERS Coef20 : 3.508 CoefTot : -1.137 ChDiff : -6 ZoneTo : 62 KR : 9 DE : 2 CleavSite : 70 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.982 1.418 0.201 0.534 MesoH : -0.681 0.099 -0.404 0.198 MuHd_075 : 38.319 21.751 11.088 7.392 MuHd_095 : 34.264 19.967 7.955 7.666 MuHd_100 : 40.669 21.778 9.778 9.664 MuHd_105 : 47.091 20.884 11.815 10.158 Hmax_075 : 14.233 16.333 6.166 3.840 Hmax_095 : 7.612 16.300 4.264 5.370 Hmax_100 : 12.400 16.300 3.267 5.370 Hmax_105 : 12.100 7.700 4.264 4.261 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3925 0.6075 DFMC : 0.4363 0.5637 This protein is probably imported in mitochondria. f(Ser) = 0.1774 f(Arg) = 0.1290 CMi = 0.70785 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 749 YLL029W MTSKPSTSDGRAHSISHVPGTHMRGTSASHSPRPFRPCADCTCSPGLLSRQGRRASLFLRQLENSRRSSSMLLNELKGAG 80 GGSSAGNGSVYSCDSLCAVNREVNTTDRLLKLRQEMKKHDLCCYIVPSCDEHQSEYVSLRDQRRAFISGFSGSAGVACIT 160 RDLLNFNDDHPDGKSILSTDGRYFNQARQELDYNWTLLRQNEDPITWQEWCVREALEMAKGLGNKEGMVLKIGIDPKLIT 240 FNDYVSFRKMIDTKYDAKGKVELVPVEENLVDSIWPDFETLPERPCNDLLLLKYEFHGEEFKDKKEKLLKKLNDKASSAT 320 TGRNTFIVVALDEICWLLNLRGSDIDYNPVFFSYVAINEDETILFTNNPFNDDISEYFKINGIEVRPYEQIWEHLTKITS 400 QASSAEHEFLIPDSASWQMVRCLNTSTNANGAIAKKMTAQNFAIIHSPIDVLKSIKNDIEIKNAHKAQVKDAVCLVQYFA 480 WLEQQLVGREALIDEYRAAEKLTEIRKTQRNFMGNSFETISSTGSNAAIIHYSPPVENSSMIDPTKIYLCDSGSQFLEGT 560 TDITRTIHLTKPTKEEMDNYTLVLKGGLALERLIFPENTPGFNIDAIARQFLWSRGLDYKHGTGHGIGSFLNVHEGPMGV 640 GFRPHLMNFPLRAGNIISNEPGYYKDGEYGIRIESDMLIKKATEKGNFLKFENMTVVPYCRKLINTKLLNEEEKTQINEY 720 HARVWRTIVHFLQPQSISYKWLKRETSPL 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YLL029W 4 ---MTSK|PS 0.062 . YLL029W 11 PSTSDGR|AH 0.083 . YLL029W 24 VPGTHMR|GT 0.152 . YLL029W 33 SASHSPR|PF 0.141 . YLL029W 36 HSPRPFR|PC 0.287 . YLL029W 50 SPGLLSR|QG 0.080 . YLL029W 53 LLSRQGR|RA 0.477 . YLL029W 54 LSRQGRR|AS 0.109 . YLL029W 60 RASLFLR|QL 0.141 . YLL029W 66 RQLENSR|RS 0.074 . YLL029W 67 QLENSRR|SS 0.253 . YLL029W 77 MLLNELK|GA 0.081 . YLL029W 101 SLCAVNR|EV 0.122 . YLL029W 108 EVNTTDR|LL 0.077 . YLL029W 111 TTDRLLK|LR 0.096 . YLL029W 113 DRLLKLR|QE 0.087 . YLL029W 117 KLRQEMK|KH 0.060 . YLL029W 118 LRQEMKK|HD 0.092 . YLL029W 140 SEYVSLR|DQ 0.131 . YLL029W 143 VSLRDQR|RA 0.277 . YLL029W 144 SLRDQRR|AF 0.208 . YLL029W 161 GVACITR|DL 0.094 . YLL029W 174 DDHPDGK|SI 0.073 . YLL029W 182 ILSTDGR|YF 0.148 . YLL029W 188 RYFNQAR|QE 0.097 . YLL029W 199 YNWTLLR|QN 0.095 . YLL029W 213 WQEWCVR|EA 0.088 . YLL029W 220 EALEMAK|GL 0.088 . YLL029W 225 AKGLGNK|EG 0.056 . YLL029W 231 KEGMVLK|IG 0.058 . YLL029W 237 KIGIDPK|LI 0.062 . YLL029W 248 NDYVSFR|KM 0.092 . YLL029W 249 DYVSFRK|MI 0.100 . YLL029W 254 RKMIDTK|YD 0.074 . YLL029W 258 DTKYDAK|GK 0.062 . YLL029W 260 KYDAKGK|VE 0.053 . YLL029W 284 FETLPER|PC 0.078 . YLL029W 293 NDLLLLK|YE 0.062 . YLL029W 302 FHGEEFK|DK 0.067 . YLL029W 304 GEEFKDK|KE 0.056 . YLL029W 305 EEFKDKK|EK 0.070 . YLL029W 307 FKDKKEK|LL 0.066 . YLL029W 310 KKEKLLK|KL 0.066 . YLL029W 311 KEKLLKK|LN 0.095 . YLL029W 315 LKKLNDK|AS 0.064 . YLL029W 323 SSATTGR|NT 0.111 . YLL029W 341 CWLLNLR|GS 0.071 . YLL029W 379 DISEYFK|IN 0.074 . YLL029W 386 INGIEVR|PY 0.127 . YLL029W 397 IWEHLTK|IT 0.084 . YLL029W 421 ASWQMVR|CL 0.095 . YLL029W 435 ANGAIAK|KM 0.076 . YLL029W 436 NGAIAKK|MT 0.120 . YLL029W 453 SPIDVLK|SI 0.090 . YLL029W 456 DVLKSIK|ND 0.059 . YLL029W 462 KNDIEIK|NA 0.073 . YLL029W 466 EIKNAHK|AQ 0.056 . YLL029W 470 AHKAQVK|DA 0.072 . YLL029W 489 EQQLVGR|EA 0.094 . YLL029W 497 ALIDEYR|AA 0.111 . YLL029W 501 EYRAAEK|LT 0.062 . YLL029W 506 EKLTEIR|KT 0.080 . YLL029W 507 KLTEIRK|TQ 0.067 . YLL029W 510 EIRKTQR|NF 0.084 . YLL029W 546 SMIDPTK|IY 0.060 . YLL029W 565 GTTDITR|TI 0.075 . YLL029W 571 RTIHLTK|PT 0.072 . YLL029W 574 HLTKPTK|EE 0.060 . YLL029W 585 NYTLVLK|GG 0.057 . YLL029W 592 GGLALER|LI 0.081 . YLL029W 609 NIDAIAR|QF 0.080 . YLL029W 615 RQFLWSR|GL 0.106 . YLL029W 620 SRGLDYK|HG 0.073 . YLL029W 643 PMGVGFR|PH 0.077 . YLL029W 652 LMNFPLR|AG 0.095 . YLL029W 665 NEPGYYK|DG 0.073 . YLL029W 672 DGEYGIR|IE 0.083 . YLL029W 680 ESDMLIK|KA 0.065 . YLL029W 681 SDMLIKK|AT 0.138 . YLL029W 685 IKKATEK|GN 0.069 . YLL029W 690 EKGNFLK|FE 0.065 . YLL029W 701 TVVPYCR|KL 0.073 . YLL029W 702 VVPYCRK|LI 0.076 . YLL029W 707 RKLINTK|LL 0.068 . YLL029W 714 LLNEEEK|TQ 0.066 . YLL029W 723 INEYHAR|VW 0.130 . YLL029W 726 YHARVWR|TI 0.300 . YLL029W 740 PQSISYK|WL 0.073 . YLL029W 743 ISYKWLK|RE 0.059 . YLL029W 744 SYKWLKR|ET 0.202 . ____________________________^_________________

  • Fasta :-

    >YLL029W ATGACTTCGAAACCATCCACCAGTGACGGCAGGGCTCACTCGATTTCCCATGTACCTGGC ACGCACATGAGAGGAACATCGGCATCACACAGCCCCAGACCGTTTAGGCCATGTGCGGAT TGTACGTGTTCTCCAGGCTTACTGTCTAGGCAAGGTCGTAGAGCCTCTCTATTTTTAAGA CAGTTAGAAAATTCAAGGAGGTCCTCCAGCATGCTTCTCAACGAGTTGAAGGGCGCTGGC GGAGGTAGCAGTGCTGGAAATGGGTCTGTTTACTCATGTGACTCTCTATGCGCTGTTAAC AGGGAAGTTAACACTACTGATAGATTGTTGAAGTTGCGTCAGGAGATGAAGAAACACGAT TTGTGTTGTTATATTGTGCCCAGTTGTGACGAACATCAGTCCGAATATGTATCATTGCGA GATCAAAGGCGCGCCTTCATTTCAGGGTTTTCCGGATCGGCCGGTGTAGCCTGTATCACC AGAGACTTGTTAAATTTCAACGATGACCATCCGGATGGGAAATCCATTTTGAGTACTGAT GGAAGATATTTCAATCAAGCTAGACAAGAACTAGATTATAATTGGACACTTTTGAGGCAA AACGAAGACCCAATCACTTGGCAAGAATGGTGTGTCAGAGAAGCTTTGGAAATGGCCAAG GGACTTGGCAATAAAGAGGGAATGGTGTTGAAGATAGGTATTGACCCAAAACTTATCACT TTCAACGACTATGTTTCTTTTAGAAAAATGATTGACACTAAATATGACGCAAAGGGTAAA GTGGAGCTGGTTCCCGTGGAGGAAAACTTAGTTGACAGTATTTGGCCTGATTTTGAAACT CTACCTGAAAGGCCTTGTAACGATTTACTACTGTTAAAATACGAGTTTCATGGTGAAGAA TTCAAAGACAAGAAGGAAAAGTTACTGAAAAAGCTGAATGATAAGGCTTCCTCTGCGACG ACCGGTAGGAATACTTTCATAGTAGTTGCGTTGGATGAAATTTGTTGGTTGTTGAACTTG CGTGGATCCGACATTGACTATAATCCAGTTTTTTTCTCCTACGTGGCTATTAACGAAGAC GAAACCATTCTTTTCACCAATAACCCCTTCAATGATGACATATCGGAATATTTTAAGATA AACGGTATTGAAGTCAGACCTTACGAACAGATATGGGAACATTTAACAAAGATAACTTCG CAGGCTTCTTCTGCGGAGCATGAATTTTTGATTCCTGATAGTGCATCGTGGCAGATGGTT CGTTGTTTGAACACCTCAACCAACGCTAACGGTGCAATAGCTAAAAAAATGACTGCACAA AACTTTGCGATAATTCACTCACCCATCGATGTTTTGAAATCTATCAAGAATGACATCGAA ATAAAAAACGCACACAAGGCGCAGGTCAAAGACGCAGTATGTTTAGTGCAGTATTTTGCA TGGCTGGAGCAGCAATTAGTGGGGCGCGAGGCACTGATAGATGAATATCGTGCCGCAGAA AAATTGACCGAGATTAGGAAAACCCAAAGGAACTTCATGGGCAATTCCTTCGAAACAATA TCCTCCACAGGTAGTAACGCCGCCATCATACATTATTCGCCGCCCGTAGAGAACTCTTCG ATGATTGATCCTACCAAGATATATCTTTGCGACTCCGGTTCGCAATTCTTGGAGGGTACA ACTGATATAACAAGAACAATTCACTTAACAAAGCCAACCAAAGAAGAAATGGATAATTAC ACACTGGTACTTAAAGGTGGCTTAGCCCTAGAGAGGTTGATTTTTCCCGAAAACACTCCC GGGTTTAATATCGACGCCATCGCTAGGCAGTTTTTATGGTCCCGCGGGTTAGATTACAAA CATGGCACAGGCCATGGTATCGGATCATTTTTAAACGTTCACGAAGGACCCATGGGTGTC GGCTTTAGGCCACATCTGATGAATTTCCCCTTAAGAGCGGGTAACATAATAAGTAACGAA CCAGGTTATTATAAGGATGGTGAGTATGGTATCAGGATTGAAAGCGACATGTTAATCAAG AAGGCCACTGAGAAGGGTAACTTCTTGAAATTCGAAAACATGACTGTGGTTCCCTATTGC AGGAAGTTGATCAATACTAAGTTACTAAACGAAGAAGAAAAAACACAGATTAACGAGTAC CACGCAAGGGTATGGAGGACAATAGTGCATTTTCTGCAGCCTCAGAGTATTTCATACAAG TGGCTGAAAAGAGAAACAAGCCCACTATGA
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  • Fasta :-

    MTSKPSTSDGRAHSISHVPGTHMRGTSASHSPRPFRPCADCTCSPGLLSRQGRRASLFLR QLENSRRSSSMLLNELKGAGGGSSAGNGSVYSCDSLCAVNREVNTTDRLLKLRQEMKKHD LCCYIVPSCDEHQSEYVSLRDQRRAFISGFSGSAGVACITRDLLNFNDDHPDGKSILSTD GRYFNQARQELDYNWTLLRQNEDPITWQEWCVREALEMAKGLGNKEGMVLKIGIDPKLIT FNDYVSFRKMIDTKYDAKGKVELVPVEENLVDSIWPDFETLPERPCNDLLLLKYEFHGEE FKDKKEKLLKKLNDKASSATTGRNTFIVVALDEICWLLNLRGSDIDYNPVFFSYVAINED ETILFTNNPFNDDISEYFKINGIEVRPYEQIWEHLTKITSQASSAEHEFLIPDSASWQMV RCLNTSTNANGAIAKKMTAQNFAIIHSPIDVLKSIKNDIEIKNAHKAQVKDAVCLVQYFA WLEQQLVGREALIDEYRAAEKLTEIRKTQRNFMGNSFETISSTGSNAAIIHYSPPVENSS MIDPTKIYLCDSGSQFLEGTTDITRTIHLTKPTKEEMDNYTLVLKGGLALERLIFPENTP GFNIDAIARQFLWSRGLDYKHGTGHGIGSFLNVHEGPMGVGFRPHLMNFPLRAGNIISNE PGYYKDGEYGIRIESDMLIKKATEKGNFLKFENMTVVPYCRKLINTKLLNEEEKTQINEY HARVWRTIVHFLQPQSISYKWLKRETSPL

  • title: active site
  • coordinates: H531,D551,D562,S629,E660,E674
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
YLL029WT20.6130.640YLL029WT70.5680.050YLL029WS30.5050.068
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
YLL029WT20.6130.640YLL029WT70.5680.050YLL029WS30.5050.068
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YLL029W68 SNSRRSSSML0.994unspYLL029W68 SNSRRSSSML0.994unspYLL029W68 SNSRRSSSML0.994unspYLL029W138 SSEYVSLRDQ0.997unspYLL029W403 STSQASSAEH0.993unspYLL029W404 SSQASSAEHE0.992unspYLL029W454 SDVLKSIKND0.991unspYLL029W540 SVENSSMIDP0.994unspYLL029W6 STSKPSTSDG0.998unspYLL029W31 SSASHSPRPF0.997unsp

YLL029W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India