YLR066W | signal peptidase complex subunit SPC3

No Results
No Results

  • Fasta :-

    >YLR066W MFSFVQRFQNVSNQAFSMGIVMVVFIMASSYYQLINNNAFSVPSNIDNVKTLINVRTSRY FGSQRGKAKENMKIKFDLNTDLTPLFNWNTKQVFVYLTAEYNSTEKITSEVTFWDKIIKS KDDAVIDVNDLRSKYSIWDIEDGKFEGKDLVFKLHWNVQPWVGLLTYGETVGNYTLTVEN KNKV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YLR066W.fa Sequence name : YLR066W Sequence length : 184 VALUES OF COMPUTED PARAMETERS Coef20 : 4.360 CoefTot : -1.542 ChDiff : 2 ZoneTo : 69 KR : 7 DE : 1 CleavSite : 69 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.171 1.906 0.313 0.698 MesoH : -0.734 0.068 -0.491 0.109 MuHd_075 : 38.184 20.429 10.341 7.418 MuHd_095 : 28.629 24.196 8.807 8.017 MuHd_100 : 31.369 25.452 8.824 7.901 MuHd_105 : 33.497 28.436 9.126 8.366 Hmax_075 : 14.933 24.800 2.634 5.378 Hmax_095 : 17.500 19.500 2.871 6.143 Hmax_100 : 19.300 16.900 2.604 5.780 Hmax_105 : 11.800 26.833 4.986 4.290 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2608 0.7392 DFMC : 0.1114 0.8886 This protein is probably imported in mitochondria. f(Ser) = 0.1304 f(Arg) = 0.0580 CMi = 0.86290 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 184 YLR066W MFSFVQRFQNVSNQAFSMGIVMVVFIMASSYYQLINNNAFSVPSNIDNVKTLINVRTSRYFGSQRGKAKENMKIKFDLNT 80 DLTPLFNWNTKQVFVYLTAEYNSTEKITSEVTFWDKIIKSKDDAVIDVNDLRSKYSIWDIEDGKFEGKDLVFKLHWNVQP 160 WVGLLTYGETVGNYTLTVENKNKV 240 ................................................................................ 80 ................................................................................ 160 ........................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YLR066W 7 MFSFVQR|FQ 0.124 . YLR066W 50 SNIDNVK|TL 0.070 . YLR066W 56 KTLINVR|TS 0.070 . YLR066W 59 INVRTSR|YF 0.394 . YLR066W 65 RYFGSQR|GK 0.090 . YLR066W 67 FGSQRGK|AK 0.070 . YLR066W 69 SQRGKAK|EN 0.090 . YLR066W 73 KAKENMK|IK 0.067 . YLR066W 75 KENMKIK|FD 0.071 . YLR066W 91 LFNWNTK|QV 0.096 . YLR066W 106 EYNSTEK|IT 0.068 . YLR066W 116 EVTFWDK|II 0.060 . YLR066W 119 FWDKIIK|SK 0.085 . YLR066W 121 DKIIKSK|DD 0.073 . YLR066W 132 IDVNDLR|SK 0.106 . YLR066W 134 VNDLRSK|YS 0.063 . YLR066W 144 WDIEDGK|FE 0.069 . YLR066W 148 DGKFEGK|DL 0.073 . YLR066W 153 GKDLVFK|LH 0.067 . YLR066W 181 TLTVENK|NK 0.062 . YLR066W 183 TVENKNK|V- 0.070 . ____________________________^_________________

  • Fasta :-

    >YLR066W ATGTTCTCCTTTGTCCAAAGATTCCAGAATGTATCGAACCAGGCCTTTTCAATGGGAATT GTAATGGTTGTATTCATCATGGCATCCTCATACTATCAATTAATCAATAATAACGCGTTC TCAGTACCTAGTAATATCGATAACGTCAAAACTTTAATAAATGTTAGAACAAGTAGATAT TTTGGCTCACAGAGAGGCAAGGCAAAGGAAAATATGAAAATTAAATTTGATCTAAATACA GATCTCACTCCCCTATTCAATTGGAATACAAAGCAAGTTTTTGTCTATCTAACTGCTGAG TATAACAGTACTGAAAAAATAACAAGTGAGGTAACATTTTGGGATAAGATCATAAAAAGC AAGGATGATGCTGTGATTGATGTGAACGATCTAAGATCCAAGTATTCTATCTGGGATATT GAAGATGGAAAATTCGAAGGCAAGGATTTGGTTTTCAAGTTACACTGGAATGTTCAACCA TGGGTAGGTTTGCTAACTTACGGTGAAACTGTAGGCAACTATACACTGACCGTGGAAAAT AAAAACAAAGTTTAG
  • Download Fasta

  • Fasta :-

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
YLR066W58 SNVRTSRYFG0.996unspYLR066W120 SKIIKSKDDA0.992unsp

YLR066W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India