_IDPredictionOTHERSPmTPCS_Position
YLR121CSP0.0001940.9994900.000316CS pos: 20-21. AFG-RV. Pr: 0.9494
No Results
  • Fasta :-

    >YLR121C MKLQLAAVATLAVLTSPAFGRVLPDGKYVKIPFTKKKNGDNGELSKRSNGHEKFVLANEQ SFYSVELAIGTPSQNLTVLLDTGSADLWVPGKGNPYCGSVMDCDQYGVFDKTKSSTFKAN KSSPFYAAYGDGTYAEGAFGQDKLKYNELDLSGLSFAVANESNSTFGVLGIGLSTLEVTY SGKVAIMDKRSYEYDNFPLFLKHSGAIDATAYSLFLNDESQSSGSILFGAVDHSKYEGQL YTIPLVNLYKSQGYQHPVAFDVTLQGLGLQTDKRNITLTTTKLPALLDSGTTLTYLPSQA VALLAKSLNASYSKTLGYYEYTCPSSDNKTSVAFDFGGFRINAPLSDFTMQTSVGTCVLA IIPQAGNATAILGDSFLRNAYVVYDLDNYEISLAQAKYGTGKENVEVIKSTVPSAIRAPS YNNTWSNYASATSGGNIFTTVRTFNGTSTATTTRSTTTKKTNSTTTAKSTHKSKRALQRA ATNSASSIRSTLGLLLVPSLLILSVFFS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YLR121C.fa Sequence name : YLR121C Sequence length : 508 VALUES OF COMPUTED PARAMETERS Coef20 : 4.456 CoefTot : -1.309 ChDiff : 6 ZoneTo : 39 KR : 7 DE : 1 CleavSite : 31 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.265 2.400 0.413 0.817 MesoH : -0.102 0.378 -0.232 0.253 MuHd_075 : 42.548 23.623 10.415 8.403 MuHd_095 : 28.687 17.871 6.653 5.744 MuHd_100 : 27.887 18.271 6.177 5.732 MuHd_105 : 28.082 17.841 6.665 6.371 Hmax_075 : 13.883 15.488 1.588 5.810 Hmax_095 : 17.500 19.900 3.299 6.170 Hmax_100 : 7.600 13.500 3.299 4.800 Hmax_105 : 19.133 20.300 3.592 7.210 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6427 0.3573 DFMC : 0.8332 0.1668
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 508 YLR121C MKLQLAAVATLAVLTSPAFGRVLPDGKYVKIPFTKKKNGDNGELSKRSNGHEKFVLANEQSFYSVELAIGTPSQNLTVLL 80 DTGSADLWVPGKGNPYCGSVMDCDQYGVFDKTKSSTFKANKSSPFYAAYGDGTYAEGAFGQDKLKYNELDLSGLSFAVAN 160 ESNSTFGVLGIGLSTLEVTYSGKVAIMDKRSYEYDNFPLFLKHSGAIDATAYSLFLNDESQSSGSILFGAVDHSKYEGQL 240 YTIPLVNLYKSQGYQHPVAFDVTLQGLGLQTDKRNITLTTTKLPALLDSGTTLTYLPSQAVALLAKSLNASYSKTLGYYE 320 YTCPSSDNKTSVAFDFGGFRINAPLSDFTMQTSVGTCVLAIIPQAGNATAILGDSFLRNAYVVYDLDNYEISLAQAKYGT 400 GKENVEVIKSTVPSAIRAPSYNNTWSNYASATSGGNIFTTVRTFNGTSTATTTRSTTTKKTNSTTTAKSTHKSKRALQRA 480 ATNSASSIRSTLGLLLVPSLLILSVFFS 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YLR121C 2 -----MK|LQ 0.064 . YLR121C 21 TSPAFGR|VL 0.104 . YLR121C 27 RVLPDGK|YV 0.066 . YLR121C 30 PDGKYVK|IP 0.062 . YLR121C 35 VKIPFTK|KK 0.062 . YLR121C 36 KIPFTKK|KN 0.109 . YLR121C 37 IPFTKKK|NG 0.173 . YLR121C 46 DNGELSK|RS 0.062 . YLR121C 47 NGELSKR|SN 0.320 . YLR121C 53 RSNGHEK|FV 0.147 . YLR121C 92 DLWVPGK|GN 0.066 . YLR121C 111 QYGVFDK|TK 0.065 . YLR121C 113 GVFDKTK|SS 0.080 . YLR121C 118 TKSSTFK|AN 0.081 . YLR121C 121 STFKANK|SS 0.067 . YLR121C 143 GAFGQDK|LK 0.065 . YLR121C 145 FGQDKLK|YN 0.070 . YLR121C 183 EVTYSGK|VA 0.061 . YLR121C 189 KVAIMDK|RS 0.059 . YLR121C 190 VAIMDKR|SY 0.221 . YLR121C 202 NFPLFLK|HS 0.069 . YLR121C 235 GAVDHSK|YE 0.076 . YLR121C 250 PLVNLYK|SQ 0.087 . YLR121C 273 LGLQTDK|RN 0.058 . YLR121C 274 GLQTDKR|NI 0.143 . YLR121C 282 ITLTTTK|LP 0.052 . YLR121C 306 AVALLAK|SL 0.086 . YLR121C 314 LNASYSK|TL 0.076 . YLR121C 329 CPSSDNK|TS 0.065 . YLR121C 340 FDFGGFR|IN 0.067 . YLR121C 378 LGDSFLR|NA 0.084 . YLR121C 397 ISLAQAK|YG 0.075 . YLR121C 402 AKYGTGK|EN 0.070 . YLR121C 409 ENVEVIK|ST 0.079 . YLR121C 417 TVPSAIR|AP 0.079 . YLR121C 442 NIFTTVR|TF 0.068 . YLR121C 454 STATTTR|ST 0.164 . YLR121C 459 TRSTTTK|KT 0.086 . YLR121C 460 RSTTTKK|TN 0.104 . YLR121C 468 NSTTTAK|ST 0.105 . YLR121C 472 TAKSTHK|SK 0.094 . YLR121C 474 KSTHKSK|RA 0.069 . YLR121C 475 STHKSKR|AL 0.347 . YLR121C 479 SKRALQR|AA 0.166 . YLR121C 489 NSASSIR|ST 0.149 . ____________________________^_________________
  • Fasta :-

    >YLR121C ATGAAACTTCAATTGGCGGCAGTGGCTACATTAGCAGTCTTAACTAGTCCGGCATTCGGT AGAGTACTTCCCGATGGGAAATACGTCAAGATTCCCTTCACAAAAAAAAAGAACGGCGAC AATGGTGAACTCAGCAAGAGATCGAACGGCCATGAAAAATTTGTACTAGCTAACGAGCAA AGCTTTTATTCTGTTGAGCTAGCCATTGGTACACCTTCACAAAACCTCACTGTGCTGTTA GACACAGGCTCAGCTGACTTATGGGTTCCTGGCAAGGGAAACCCCTACTGCGGTTCTGTG ATGGACTGTGACCAGTATGGCGTGTTCGACAAGACCAAGTCGTCCACGTTCAAAGCCAAC AAGTCCTCGCCTTTTTATGCCGCTTACGGTGACGGAACCTATGCAGAAGGTGCATTTGGT CAAGATAAATTAAAGTACAACGAATTAGACCTCAGTGGTCTATCGTTTGCCGTGGCCAAC GAATCTAACTCAACCTTTGGTGTGCTCGGGATCGGCCTTTCCACGCTTGAAGTCACCTAT TCTGGAAAAGTCGCTATTATGGACAAGAGAAGCTACGAGTATGATAACTTTCCCCTGTTC CTAAAACATTCTGGAGCCATCGATGCAACCGCATACTCTCTTTTCCTAAATGACGAGTCA CAGTCCTCCGGCAGCATCCTCTTCGGCGCTGTAGATCACAGCAAGTACGAGGGCCAACTG TACACTATCCCGTTGGTTAATCTTTATAAGTCGCAGGGTTATCAGCACCCGGTGGCGTTC GATGTCACTTTACAGGGCTTAGGACTGCAAACCGACAAGCGCAACATCACATTGACCACC ACCAAGCTCCCAGCCCTACTCGATTCAGGCACAACGCTAACATATCTGCCCTCCCAGGCA GTGGCTTTGCTAGCAAAGAGCTTGAATGCCTCGTATTCCAAGACATTGGGTTATTATGAG TACACGTGTCCCTCGAGCGACAACAAAACCAGCGTGGCCTTCGACTTCGGTGGCTTCCGT ATCAACGCTCCTCTATCCGACTTTACTATGCAGACCAGTGTGGGGACCTGTGTCTTGGCA ATAATTCCACAAGCGGGCAACGCCACCGCTATCCTTGGTGATTCCTTCTTGAGAAACGCC TACGTGGTCTACGATTTGGATAACTACGAGATTTCCCTAGCTCAAGCCAAGTATGGCACG GGGAAAGAGAACGTCGAAGTCATCAAATCTACCGTTCCCAGTGCAATAAGGGCCCCCAGT TACAACAACACTTGGTCTAACTACGCCTCCGCCACGTCCGGTGGTAATATTTTTACCACC GTGCGCACTTTCAATGGCACCAGTACTGCCACCACTACGAGGTCAACCACCACCAAGAAG ACAAACTCTACCACTACTGCAAAGTCGACTCATAAAAGCAAGAGGGCACTCCAGAGGGCT GCTACCAACTCCGCTTCCAGTATACGCTCTACCTTGGGTTTACTGCTAGTCCCCTCCTTA CTCATCCTTTCCGTTTTCTTTTCGTAA
  • Download Fasta
  • Fasta :-

    MKLQLAAVATLAVLTSPAFGRVLPDGKYVKIPFTKKKNGDNGELSKRSNGHEKFVLANEQ SFYSVELAIGTPSQNLTVLLDTGSADLWVPGKGNPYCGSVMDCDQYGVFDKTKSSTFKAN KSSPFYAAYGDGTYAEGAFGQDKLKYNELDLSGLSFAVANESNSTFGVLGIGLSTLEVTY SGKVAIMDKRSYEYDNFPLFLKHSGAIDATAYSLFLNDESQSSGSILFGAVDHSKYEGQL YTIPLVNLYKSQGYQHPVAFDVTLQGLGLQTDKRNITLTTTKLPALLDSGTTLTYLPSQA VALLAKSLNASYSKTLGYYEYTCPSSDNKTSVAFDFGGFRINAPLSDFTMQTSVGTCVLA IIPQAGNATAILGDSFLRNAYVVYDLDNYEISLAQAKYGTGKENVEVIKSTVPSAIRAPS YNNTWSNYASATSGGNIFTTVRTFNGTSTATTTRSTTTKKTNSTTTAKSTHKSKRALQRA ATNSASSIRSTLGLLLVPSLLILSVFFS

  • title: catalytic residue
  • coordinates: D81,D288
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
YLR121CT4580.6150.070YLR121CT4560.6100.018YLR121CT4610.6060.040YLR121CT4520.6030.282YLR121CT4530.5850.067YLR121CT4570.5850.024YLR121CT4510.5680.020YLR121CT4640.5390.054YLR121CT4430.5350.048YLR121CS4550.5290.023YLR121CT4660.5210.050YLR121CT4650.5190.017
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
YLR121CT4580.6150.070YLR121CT4560.6100.018YLR121CT4610.6060.040YLR121CT4520.6030.282YLR121CT4530.5850.067YLR121CT4570.5850.024YLR121CT4510.5680.020YLR121CT4640.5390.054YLR121CT4430.5350.048YLR121CS4550.5290.023YLR121CT4660.5210.050YLR121CT4650.5190.017
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YLR121C487 SNSASSIRST0.997unspYLR121C487 SNSASSIRST0.997unspYLR121C487 SNSASSIRST0.997unspYLR121C234 SAVDHSKYEG0.992unspYLR121C469 STTAKSTHKS0.994unsp

YLR121C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India