YLR253W | Mcp2p

No Results
No Results

  • Fasta :-

    >YLR253W MMTKAFFNKLPFEVFRRYVRTGKSIPQRSPRTRKSLLVGGTIASAVVLYNFNDTFHDSVK HTALTTKRIAVVTQATTRCFYHYKRALNKSYENKKEREVALNKCHKMCALITLHALRSNG GIYIKLGQHIGAMTYLLPKEWTDTMIPLQDHCPESTYEEIDELFKEDLGTSIEDMFLEFN KTPIGVASLAQVHVAKLKNSDGKGSSVAVKCQHPSLKEFIPLDVMLTRTVFELLDVFFPD YPLTWLGDELQSSIYVELNFTKEAENAEKTRHYFSKFKKQTALKIPKVIESHKRILIMEY VGGKRLDDLEYIDSHGISRSEVSSCLSHIFNNMIFTPNVGIHCDPHGGNLAIRSVKPAKD NGYHNFEIVLFDHGLYRYPSTRTRRLYAKFWLSLLFDKDQTKMKKYAKGFANITDEQFPL LAAAITGRSIDAALNYDISTSRTQEEMDVMANGILEGTLLSDLMSILSRIPRVVLLILKT NDLTRHLDECLQNPLGPERTFLIMTQYCAKTVYDEKVERINSEYARWSIKWMWENLTNWI VYERRINQLYFYDFVLWWKKFIPKTWLSS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YLR253W.fa Sequence name : YLR253W Sequence length : 569 VALUES OF COMPUTED PARAMETERS Coef20 : 4.572 CoefTot : -0.896 ChDiff : 12 ZoneTo : 52 KR : 10 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.476 1.594 0.211 0.616 MesoH : -0.649 0.427 -0.364 0.207 MuHd_075 : 32.662 24.528 8.730 6.358 MuHd_095 : 56.575 24.460 12.937 13.435 MuHd_100 : 58.107 26.442 13.664 13.693 MuHd_105 : 53.422 24.994 13.405 11.381 Hmax_075 : 20.767 27.650 3.035 6.837 Hmax_095 : 8.663 12.688 0.763 3.938 Hmax_100 : 11.500 8.300 1.555 4.380 Hmax_105 : 13.200 11.800 1.869 6.417 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0396 0.9604 DFMC : 0.0343 0.9657 This protein is probably imported in mitochondria. f(Ser) = 0.0769 f(Arg) = 0.1154 CMi = 0.33223 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 569 YLR253W MMTKAFFNKLPFEVFRRYVRTGKSIPQRSPRTRKSLLVGGTIASAVVLYNFNDTFHDSVKHTALTTKRIAVVTQATTRCF 80 YHYKRALNKSYENKKEREVALNKCHKMCALITLHALRSNGGIYIKLGQHIGAMTYLLPKEWTDTMIPLQDHCPESTYEEI 160 DELFKEDLGTSIEDMFLEFNKTPIGVASLAQVHVAKLKNSDGKGSSVAVKCQHPSLKEFIPLDVMLTRTVFELLDVFFPD 240 YPLTWLGDELQSSIYVELNFTKEAENAEKTRHYFSKFKKQTALKIPKVIESHKRILIMEYVGGKRLDDLEYIDSHGISRS 320 EVSSCLSHIFNNMIFTPNVGIHCDPHGGNLAIRSVKPAKDNGYHNFEIVLFDHGLYRYPSTRTRRLYAKFWLSLLFDKDQ 400 TKMKKYAKGFANITDEQFPLLAAAITGRSIDAALNYDISTSRTQEEMDVMANGILEGTLLSDLMSILSRIPRVVLLILKT 480 NDLTRHLDECLQNPLGPERTFLIMTQYCAKTVYDEKVERINSEYARWSIKWMWENLTNWIVYERRINQLYFYDFVLWWKK 560 FIPKTWLSS 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ......... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YLR253W 4 ---MMTK|AF 0.069 . YLR253W 9 TKAFFNK|LP 0.073 . YLR253W 16 LPFEVFR|RY 0.091 . YLR253W 17 PFEVFRR|YV 0.285 . YLR253W 20 VFRRYVR|TG 0.153 . YLR253W 23 RYVRTGK|SI 0.166 . YLR253W 28 GKSIPQR|SP 0.143 . YLR253W 31 IPQRSPR|TR 0.289 . YLR253W 33 QRSPRTR|KS 0.140 . YLR253W 34 RSPRTRK|SL 0.496 . YLR253W 60 TFHDSVK|HT 0.067 . YLR253W 67 HTALTTK|RI 0.069 . YLR253W 68 TALTTKR|IA 0.190 . YLR253W 78 VTQATTR|CF 0.084 . YLR253W 84 RCFYHYK|RA 0.062 . YLR253W 85 CFYHYKR|AL 0.191 . YLR253W 89 YKRALNK|SY 0.093 . YLR253W 94 NKSYENK|KE 0.070 . YLR253W 95 KSYENKK|ER 0.101 . YLR253W 97 YENKKER|EV 0.125 . YLR253W 103 REVALNK|CH 0.054 . YLR253W 106 ALNKCHK|MC 0.068 . YLR253W 117 ITLHALR|SN 0.129 . YLR253W 125 NGGIYIK|LG 0.063 . YLR253W 139 MTYLLPK|EW 0.060 . YLR253W 165 EIDELFK|ED 0.049 . YLR253W 181 MFLEFNK|TP 0.057 . YLR253W 196 AQVHVAK|LK 0.069 . YLR253W 198 VHVAKLK|NS 0.071 . YLR253W 203 LKNSDGK|GS 0.096 . YLR253W 210 GSSVAVK|CQ 0.096 . YLR253W 217 CQHPSLK|EF 0.071 . YLR253W 228 LDVMLTR|TV 0.132 . YLR253W 262 VELNFTK|EA 0.084 . YLR253W 269 EAENAEK|TR 0.054 . YLR253W 271 ENAEKTR|HY 0.117 . YLR253W 276 TRHYFSK|FK 0.103 . YLR253W 278 HYFSKFK|KQ 0.060 . YLR253W 279 YFSKFKK|QT 0.143 . YLR253W 284 KKQTALK|IP 0.066 . YLR253W 287 TALKIPK|VI 0.066 . YLR253W 293 KVIESHK|RI 0.064 . YLR253W 294 VIESHKR|IL 0.177 . YLR253W 304 MEYVGGK|RL 0.064 . YLR253W 305 EYVGGKR|LD 0.092 . YLR253W 319 DSHGISR|SE 0.098 . YLR253W 353 GGNLAIR|SV 0.246 . YLR253W 356 LAIRSVK|PA 0.174 . YLR253W 359 RSVKPAK|DN 0.100 . YLR253W 377 FDHGLYR|YP 0.095 . YLR253W 382 YRYPSTR|TR 0.079 . YLR253W 384 YPSTRTR|RL 0.114 . YLR253W 385 PSTRTRR|LY 0.325 . YLR253W 389 TRRLYAK|FW 0.085 . YLR253W 398 LSLLFDK|DQ 0.066 . YLR253W 402 FDKDQTK|MK 0.061 . YLR253W 404 KDQTKMK|KY 0.081 . YLR253W 405 DQTKMKK|YA 0.106 . YLR253W 408 KMKKYAK|GF 0.073 . YLR253W 428 AAAITGR|SI 0.235 . YLR253W 442 YDISTSR|TQ 0.080 . YLR253W 469 LMSILSR|IP 0.094 . YLR253W 472 ILSRIPR|VV 0.414 . YLR253W 479 VVLLILK|TN 0.052 . YLR253W 485 KTNDLTR|HL 0.120 . YLR253W 499 NPLGPER|TF 0.071 . YLR253W 510 MTQYCAK|TV 0.082 . YLR253W 516 KTVYDEK|VE 0.053 . YLR253W 519 YDEKVER|IN 0.096 . YLR253W 526 INSEYAR|WS 0.137 . YLR253W 530 YARWSIK|WM 0.070 . YLR253W 544 NWIVYER|RI 0.077 . YLR253W 545 WIVYERR|IN 0.106 . YLR253W 559 DFVLWWK|KF 0.058 . YLR253W 560 FVLWWKK|FI 0.088 . YLR253W 564 WKKFIPK|TW 0.065 . ____________________________^_________________

  • Fasta :-

    >YLR253W ATGATGACCAAAGCTTTTTTTAACAAACTACCGTTTGAGGTATTCCGTCGGTACGTTAGG ACAGGTAAAAGCATCCCTCAAAGAAGCCCCAGGACAAGAAAATCTCTTCTGGTGGGTGGG ACTATTGCATCAGCAGTAGTTTTGTACAACTTTAATGACACTTTTCATGATTCTGTAAAG CACACGGCACTGACGACTAAAAGAATCGCTGTCGTCACACAAGCTACCACTCGTTGCTTC TACCATTACAAGAGGGCTCTAAATAAAAGCTATGAGAACAAAAAAGAACGAGAAGTTGCC TTAAATAAATGTCATAAGATGTGTGCCTTAATCACGTTGCATGCGCTACGATCGAATGGT GGGATATATATCAAATTAGGCCAGCACATTGGGGCCATGACCTACCTGTTGCCTAAAGAA TGGACGGATACAATGATACCGTTGCAAGACCACTGTCCCGAATCCACCTACGAAGAAATT GATGAGTTATTTAAAGAAGATCTAGGCACCAGCATTGAGGATATGTTTTTAGAATTCAAC AAAACCCCGATAGGTGTAGCTTCCTTGGCACAGGTTCATGTGGCAAAACTAAAAAATAGT GACGGTAAAGGTTCTAGTGTAGCTGTCAAATGTCAGCATCCATCGTTGAAGGAGTTTATA CCATTAGATGTTATGCTGACAAGAACAGTGTTTGAACTGCTGGATGTCTTCTTCCCTGAT TATCCGTTAACGTGGCTTGGTGATGAGCTTCAGTCTTCAATCTACGTGGAACTGAATTTT ACCAAAGAAGCTGAAAATGCAGAAAAAACCCGTCATTATTTTAGTAAGTTCAAGAAGCAA ACAGCATTGAAAATACCCAAGGTCATTGAAAGCCACAAAAGAATTTTGATTATGGAATAT GTTGGAGGCAAAAGGTTGGATGATTTGGAGTACATTGACAGTCACGGTATCTCGCGCAGT GAAGTTTCGAGTTGTCTCTCTCATATTTTCAATAACATGATTTTTACTCCCAATGTAGGT ATTCATTGTGATCCTCATGGAGGAAATCTGGCCATACGATCTGTTAAGCCCGCTAAAGAT AATGGATACCATAACTTTGAAATTGTTTTATTTGACCACGGACTCTATAGATATCCTAGC ACGAGAACAAGAAGACTTTATGCCAAATTTTGGTTGTCGCTCCTATTCGACAAGGACCAG ACAAAAATGAAGAAGTATGCCAAAGGATTCGCAAACATCACCGACGAACAGTTTCCCCTT TTAGCGGCTGCAATTACGGGCCGTAGCATTGATGCTGCTTTGAATTACGACATTTCAACG AGTCGAACACAAGAAGAAATGGACGTCATGGCAAATGGGATCTTGGAAGGAACGTTACTG AGCGACTTGATGAGCATTTTGTCTAGAATCCCTCGTGTAGTGCTTTTGATATTGAAGACT AACGACCTAACCAGACATCTTGATGAATGTCTACAGAATCCACTCGGGCCAGAGAGGACT TTCCTGATCATGACGCAATACTGCGCCAAGACGGTCTACGACGAAAAAGTGGAAAGAATT AATTCGGAGTATGCGAGGTGGTCTATTAAATGGATGTGGGAGAACTTGACAAACTGGATA GTCTATGAGAGGCGTATTAATCAATTGTATTTTTATGATTTTGTGTTGTGGTGGAAAAAA TTTATTCCGAAGACTTGGTTGTCATCTTAA
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  • Fasta :-

  • title: putative ATP binding site
  • coordinates: L197,K198,N199,G204,S205,V207,K217,F219,K278,M298,E299,Y300,V301,D344,G348,N349,A351,F371,D372
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YLR253W171 SDLGTSIEDM0.996unspYLR253W171 SDLGTSIEDM0.996unspYLR253W171 SDLGTSIEDM0.996unspYLR253W90 SALNKSYENK0.991unspYLR253W155 SHCPESTYEE0.991unsp

YLR253W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India