YML055W | signal peptidase complex subunit SPC2

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  • Fasta :-

    >YML055W MSSAKPINVYSIPELNQALDEALPSVFARLNYERSYALLDAKLYIGYSIAVVAGLSFFLD KKFERDQIVTYQKLLVGAYFVLSLLFWYFSRFIEKGTVYVGKRRGTKEEIYVKTKFEKNE PLYLVELVQKKKGENSKKELKAKLEVNKVFNESGYLQNDAYFKWFSEQHNVLDTKKNE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YML055W.fa Sequence name : YML055W Sequence length : 178 VALUES OF COMPUTED PARAMETERS Coef20 : 3.557 CoefTot : -0.433 ChDiff : 6 ZoneTo : 13 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.035 1.941 0.350 0.786 MesoH : -0.468 0.607 -0.335 0.288 MuHd_075 : 10.024 1.009 2.103 0.686 MuHd_095 : 13.457 13.724 5.326 3.126 MuHd_100 : 9.857 13.834 3.432 2.794 MuHd_105 : 3.437 10.269 0.515 1.355 Hmax_075 : 1.488 1.400 -1.997 1.730 Hmax_095 : 7.000 9.500 0.606 3.380 Hmax_100 : 8.300 9.500 0.157 3.420 Hmax_105 : 1.283 6.200 -1.536 2.345 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9820 0.0180 DFMC : 0.9646 0.0354
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 178 YML055W MSSAKPINVYSIPELNQALDEALPSVFARLNYERSYALLDAKLYIGYSIAVVAGLSFFLDKKFERDQIVTYQKLLVGAYF 80 VLSLLFWYFSRFIEKGTVYVGKRRGTKEEIYVKTKFEKNEPLYLVELVQKKKGENSKKELKAKLEVNKVFNESGYLQNDA 160 YFKWFSEQHNVLDTKKNE 240 ................................................................................ 80 ................................................................................ 160 .................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YML055W 5 --MSSAK|PI 0.065 . YML055W 29 LPSVFAR|LN 0.120 . YML055W 34 ARLNYER|SY 0.093 . YML055W 42 YALLDAK|LY 0.056 . YML055W 61 LSFFLDK|KF 0.066 . YML055W 62 SFFLDKK|FE 0.108 . YML055W 65 LDKKFER|DQ 0.096 . YML055W 73 QIVTYQK|LL 0.061 . YML055W 91 LFWYFSR|FI 0.139 . YML055W 95 FSRFIEK|GT 0.069 . YML055W 102 GTVYVGK|RR 0.082 . YML055W 103 TVYVGKR|RG 0.164 . YML055W 104 VYVGKRR|GT 0.142 . YML055W 107 GKRRGTK|EE 0.116 . YML055W 113 KEEIYVK|TK 0.057 . YML055W 115 EIYVKTK|FE 0.064 . YML055W 118 VKTKFEK|NE 0.059 . YML055W 130 LVELVQK|KK 0.061 . YML055W 131 VELVQKK|KG 0.085 . YML055W 132 ELVQKKK|GE 0.086 . YML055W 137 KKGENSK|KE 0.060 . YML055W 138 KGENSKK|EL 0.125 . YML055W 141 NSKKELK|AK 0.061 . YML055W 143 KKELKAK|LE 0.068 . YML055W 148 AKLEVNK|VF 0.061 . YML055W 163 QNDAYFK|WF 0.070 . YML055W 175 HNVLDTK|KN 0.068 . YML055W 176 NVLDTKK|NE 0.076 . ____________________________^_________________

  • Fasta :-

    >YML055W ATGAGTTCTGCTAAACCTATTAATGTATATTCAATCCCGGAGTTGAACCAAGCTTTAGAT GAAGCCCTACCTTCTGTTTTCGCGAGATTAAATTACGAGAGATCATACGCTTTACTCGAT GCTAAATTGTACATAGGTTATTCCATAGCTGTTGTAGCTGGTTTGAGTTTCTTCTTGGAT AAAAAATTTGAGAGAGATCAGATTGTTACGTATCAAAAGCTTTTGGTAGGCGCATATTTT GTGCTCTCGCTACTTTTCTGGTATTTCTCTCGTTTTATTGAAAAGGGGACTGTTTATGTG GGAAAGAGAAGAGGTACAAAGGAGGAAATATATGTAAAGACAAAGTTCGAAAAGAACGAA CCATTATATCTGGTTGAGCTTGTTCAGAAAAAAAAGGGAGAAAACTCCAAGAAGGAGTTG AAGGCAAAATTAGAAGTGAATAAGGTTTTTAATGAAAGTGGATATTTACAGAACGATGCG TATTTTAAGTGGTTCTCTGAACAGCACAATGTCCTCGACACCAAAAAAAATGAATAA
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  • Fasta :-

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IDSitePeptideScoreMethod
YML055W136 SKGENSKKEL0.997unsp

YML055W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India