YMR154C | Rim13p

_IDPredictionOTHERSPmTPCS_Position
YMR154COTHER0.9999320.0000360.000032
No Results

  • Fasta :-

    >YMR154C MNDWHEFNAAIKSIYCNAEGDSSSIINRLVGLAMKSEDSTFIEAVLVLKENVSKVDKQLR FLWLTSTINSRFYPPIPISEASPVSWNKTEYCAPGTEELQRRYPGRAKLQNEEDYSGGIE QCRDVPDCSLVASLINLRSKNLNLPLIKQISSTKYHVNLSFNGSNKRLVTVDISQIPTSV DGKQLSLKSNDISDKIGELALLLVSKGTYSTDGSNISIDTYRLSGFLPEITQVNSYPFEK LWKFHKSNLCLMGAGTGNRSNDMIKPLVENHDYSIIDITYDSRLVKLRDPRNSALNVEIS YEQYLKNFKQLYLNWNQEKLFKRSQVLHFRYDTSRYNKFSIVADKPLFHLVNNSKVTETV WLLLESHLQDEGSQENRSVSFLNEAPECIICPIEPPVECGGNHIGLQLVKLRLDAETERL LYCYSTTNNNFSIHSFSVVKEICFQRLKDTKSLFAKVLFSFPYEIEGKASFDTCNFFQNP TFELEVHSEQDYQVLMDAACISTSSHDLINIQVYYFNDYELIKPIMFDNHYQPGQGLKQD VPILTNVKYMIVCSTYGPPASTEFELLASIRLSSSWRLISGITLRSVNLIYGTYPYHCRN RFHWKETSDKLKIQMTLPTKKYSTNKLFIRVVPVESSARLRMRCNIFEPESALCVYECQE YRTCPSGGIVIPDLEVSRTNIVVLMIERSVPISSCLPTEGQLDELELFVGSSQKIRIEKY SDDVIPK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YMR154C.fa Sequence name : YMR154C Sequence length : 727 VALUES OF COMPUTED PARAMETERS Coef20 : 3.362 CoefTot : -0.134 ChDiff : -6 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.647 1.441 0.107 0.417 MesoH : -0.411 0.317 -0.302 0.200 MuHd_075 : 24.826 13.598 6.644 4.997 MuHd_095 : 9.941 11.709 3.964 4.327 MuHd_100 : 19.491 14.922 4.724 5.844 MuHd_105 : 25.080 16.294 5.279 6.454 Hmax_075 : 7.933 6.767 -1.090 4.282 Hmax_095 : 3.500 10.600 0.214 4.790 Hmax_100 : 8.200 11.000 -0.275 5.150 Hmax_105 : 12.000 11.100 0.040 5.290 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9840 0.0160 DFMC : 0.9901 0.0099
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 727 YMR154C MNDWHEFNAAIKSIYCNAEGDSSSIINRLVGLAMKSEDSTFIEAVLVLKENVSKVDKQLRFLWLTSTINSRFYPPIPISE 80 ASPVSWNKTEYCAPGTEELQRRYPGRAKLQNEEDYSGGIEQCRDVPDCSLVASLINLRSKNLNLPLIKQISSTKYHVNLS 160 FNGSNKRLVTVDISQIPTSVDGKQLSLKSNDISDKIGELALLLVSKGTYSTDGSNISIDTYRLSGFLPEITQVNSYPFEK 240 LWKFHKSNLCLMGAGTGNRSNDMIKPLVENHDYSIIDITYDSRLVKLRDPRNSALNVEISYEQYLKNFKQLYLNWNQEKL 320 FKRSQVLHFRYDTSRYNKFSIVADKPLFHLVNNSKVTETVWLLLESHLQDEGSQENRSVSFLNEAPECIICPIEPPVECG 400 GNHIGLQLVKLRLDAETERLLYCYSTTNNNFSIHSFSVVKEICFQRLKDTKSLFAKVLFSFPYEIEGKASFDTCNFFQNP 480 TFELEVHSEQDYQVLMDAACISTSSHDLINIQVYYFNDYELIKPIMFDNHYQPGQGLKQDVPILTNVKYMIVCSTYGPPA 560 STEFELLASIRLSSSWRLISGITLRSVNLIYGTYPYHCRNRFHWKETSDKLKIQMTLPTKKYSTNKLFIRVVPVESSARL 640 RMRCNIFEPESALCVYECQEYRTCPSGGIVIPDLEVSRTNIVVLMIERSVPISSCLPTEGQLDELELFVGSSQKIRIEKY 720 SDDVIPK 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ....... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YMR154C 12 EFNAAIK|SI 0.080 . YMR154C 28 SSSIINR|LV 0.198 . YMR154C 35 LVGLAMK|SE 0.067 . YMR154C 49 EAVLVLK|EN 0.057 . YMR154C 54 LKENVSK|VD 0.060 . YMR154C 57 NVSKVDK|QL 0.067 . YMR154C 60 KVDKQLR|FL 0.080 . YMR154C 71 TSTINSR|FY 0.102 . YMR154C 88 SPVSWNK|TE 0.067 . YMR154C 101 GTEELQR|RY 0.072 . YMR154C 102 TEELQRR|YP 0.189 . YMR154C 106 QRRYPGR|AK 0.168 . YMR154C 108 RYPGRAK|LQ 0.058 . YMR154C 123 GGIEQCR|DV 0.124 . YMR154C 138 ASLINLR|SK 0.088 . YMR154C 140 LINLRSK|NL 0.062 . YMR154C 148 LNLPLIK|QI 0.065 . YMR154C 154 KQISSTK|YH 0.058 . YMR154C 166 SFNGSNK|RL 0.068 . YMR154C 167 FNGSNKR|LV 0.204 . YMR154C 183 PTSVDGK|QL 0.072 . YMR154C 188 GKQLSLK|SN 0.096 . YMR154C 195 SNDISDK|IG 0.066 . YMR154C 206 ALLLVSK|GT 0.065 . YMR154C 222 ISIDTYR|LS 0.096 . YMR154C 240 NSYPFEK|LW 0.060 . YMR154C 243 PFEKLWK|FH 0.061 . YMR154C 246 KLWKFHK|SN 0.077 . YMR154C 259 GAGTGNR|SN 0.130 . YMR154C 265 RSNDMIK|PL 0.070 . YMR154C 283 DITYDSR|LV 0.070 . YMR154C 286 YDSRLVK|LR 0.121 . YMR154C 288 SRLVKLR|DP 0.120 . YMR154C 291 VKLRDPR|NS 0.142 . YMR154C 306 SYEQYLK|NF 0.056 . YMR154C 309 QYLKNFK|QL 0.057 . YMR154C 319 LNWNQEK|LF 0.064 . YMR154C 322 NQEKLFK|RS 0.056 . YMR154C 323 QEKLFKR|SQ 0.204 . YMR154C 330 SQVLHFR|YD 0.084 . YMR154C 335 FRYDTSR|YN 0.098 . YMR154C 338 DTSRYNK|FS 0.169 . YMR154C 345 FSIVADK|PL 0.069 . YMR154C 355 HLVNNSK|VT 0.065 . YMR154C 377 EGSQENR|SV 0.219 . YMR154C 410 IGLQLVK|LR 0.058 . YMR154C 412 LQLVKLR|LD 0.083 . YMR154C 419 LDAETER|LL 0.076 . YMR154C 440 HSFSVVK|EI 0.065 . YMR154C 446 KEICFQR|LK 0.083 . YMR154C 448 ICFQRLK|DT 0.061 . YMR154C 451 QRLKDTK|SL 0.094 . YMR154C 456 TKSLFAK|VL 0.079 . YMR154C 468 PYEIEGK|AS 0.061 . YMR154C 523 NDYELIK|PI 0.063 . YMR154C 538 QPGQGLK|QD 0.070 . YMR154C 548 PILTNVK|YM 0.055 . YMR154C 571 ELLASIR|LS 0.082 . YMR154C 577 RLSSSWR|LI 0.149 . YMR154C 585 ISGITLR|SV 0.201 . YMR154C 599 TYPYHCR|NR 0.084 . YMR154C 601 PYHCRNR|FH 0.116 . YMR154C 605 RNRFHWK|ET 0.131 . YMR154C 610 WKETSDK|LK 0.062 . YMR154C 612 ETSDKLK|IQ 0.070 . YMR154C 620 QMTLPTK|KY 0.060 . YMR154C 621 MTLPTKK|YS 0.107 . YMR154C 626 KKYSTNK|LF 0.070 . YMR154C 630 TNKLFIR|VV 0.107 . YMR154C 639 PVESSAR|LR 0.069 . YMR154C 641 ESSARLR|MR 0.112 . YMR154C 643 SARLRMR|CN 0.110 . YMR154C 662 YECQEYR|TC 0.076 . YMR154C 678 PDLEVSR|TN 0.083 . YMR154C 688 VVLMIER|SV 0.103 . YMR154C 714 FVGSSQK|IR 0.057 . YMR154C 716 GSSQKIR|IE 0.111 . YMR154C 719 QKIRIEK|YS 0.222 . YMR154C 727 SDDVIPK|-- 0.067 . ____________________________^_________________

  • Fasta :-

    >YMR154C ATGAATGATTGGCATGAGTTCAATGCCGCGATAAAGTCAATATATTGTAATGCAGAAGGT GACTCAAGCAGTATAATTAATAGATTGGTTGGCTTGGCAATGAAAAGCGAAGATTCCACT TTTATTGAGGCCGTTTTAGTTTTGAAAGAAAATGTGTCGAAAGTAGATAAACAATTAAGA TTTTTATGGCTTACTTCAACTATTAATTCAAGGTTTTATCCCCCTATACCTATCTCAGAA GCCTCACCGGTTTCTTGGAATAAAACCGAATATTGCGCACCTGGTACTGAAGAACTACAA AGGCGTTATCCAGGGAGAGCCAAGTTACAGAATGAAGAAGACTATTCAGGCGGAATAGAA CAATGCCGAGATGTGCCAGATTGCTCATTAGTTGCTTCTCTAATTAATCTTAGGTCTAAG AACTTGAATCTCCCTCTAATTAAACAAATATCATCAACTAAATATCACGTCAATTTAAGT TTTAACGGAAGCAACAAAAGGCTAGTGACAGTAGATATTTCGCAGATCCCAACCTCAGTG GATGGCAAACAACTTTCTTTAAAGAGTAACGATATTTCGGACAAAATTGGAGAGCTTGCA TTACTGCTTGTTTCTAAAGGAACATATTCCACGGATGGCTCAAATATTAGTATAGATACT TACCGCTTAAGTGGCTTCTTACCAGAGATAACACAAGTAAACAGCTATCCTTTCGAAAAA TTATGGAAGTTTCACAAATCTAATTTATGTCTGATGGGCGCTGGCACCGGGAATCGTTCC AATGACATGATAAAGCCCCTAGTTGAGAACCATGATTACTCTATAATTGATATCACATAT GATTCTAGGCTAGTAAAATTGCGAGATCCGAGGAACTCGGCACTAAATGTTGAAATCAGC TATGAACAGTATTTAAAAAATTTCAAACAACTTTATCTTAATTGGAACCAAGAAAAATTA TTCAAACGTTCTCAGGTACTTCATTTTCGGTACGATACTTCACGCTACAATAAATTTTCT ATCGTTGCAGATAAACCTTTATTTCACCTGGTAAACAATTCTAAAGTGACAGAGACGGTA TGGTTATTGCTAGAATCCCATTTGCAAGATGAAGGCAGCCAAGAAAATCGGTCAGTTTCC TTTTTGAATGAGGCTCCCGAATGCATAATTTGTCCAATTGAACCTCCAGTAGAATGCGGT GGCAATCACATTGGACTTCAGCTGGTAAAGTTGAGATTAGATGCTGAGACTGAGAGGTTA TTGTATTGTTATTCAACAACAAACAACAATTTCAGTATTCACTCTTTCTCAGTTGTGAAG GAAATATGTTTTCAAAGATTGAAAGATACAAAAAGTCTTTTTGCCAAAGTCCTTTTCTCT TTTCCTTATGAAATAGAGGGAAAAGCCTCATTTGATACTTGTAATTTTTTTCAAAATCCG ACTTTTGAGTTGGAAGTTCACTCTGAACAAGATTATCAAGTACTTATGGACGCCGCATGT ATCTCAACTAGCTCACATGATTTAATTAACATCCAAGTATATTACTTTAATGACTATGAA TTGATAAAGCCAATAATGTTTGATAACCACTATCAGCCCGGGCAGGGCCTTAAACAAGAC GTGCCCATCTTAACTAATGTCAAATATATGATTGTATGCTCAACTTACGGCCCTCCAGCC TCAACGGAATTTGAATTACTTGCCTCGATACGGTTATCCTCTTCATGGAGGTTAATATCT GGAATAACTTTACGGAGTGTTAACTTGATATACGGTACTTATCCATATCATTGTCGCAAC AGGTTCCATTGGAAGGAAACTTCAGACAAACTTAAAATTCAGATGACTTTGCCAACCAAA AAGTATTCTACGAACAAACTTTTTATACGTGTAGTACCCGTGGAATCATCAGCACGATTA AGGATGCGATGTAATATTTTCGAGCCTGAATCAGCTCTCTGTGTTTATGAATGTCAAGAG TATAGGACATGTCCATCTGGGGGCATCGTTATACCTGATCTGGAAGTCTCTCGTACTAAC ATTGTTGTATTGATGATAGAAAGAAGTGTACCTATTTCCAGTTGTTTACCTACGGAAGGA CAATTGGATGAATTGGAGTTGTTTGTTGGGTCCAGTCAAAAAATCAGAATTGAAAAATAC TCCGATGATGTGATACCAAAATAA
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  • Fasta :-

    MNDWHEFNAAIKSIYCNAEGDSSSIINRLVGLAMKSEDSTFIEAVLVLKENVSKVDKQLR FLWLTSTINSRFYPPIPISEASPVSWNKTEYCAPGTEELQRRYPGRAKLQNEEDYSGGIE QCRDVPDCSLVASLINLRSKNLNLPLIKQISSTKYHVNLSFNGSNKRLVTVDISQIPTSV DGKQLSLKSNDISDKIGELALLLVSKGTYSTDGSNISIDTYRLSGFLPEITQVNSYPFEK LWKFHKSNLCLMGAGTGNRSNDMIKPLVENHDYSIIDITYDSRLVKLRDPRNSALNVEIS YEQYLKNFKQLYLNWNQEKLFKRSQVLHFRYDTSRYNKFSIVADKPLFHLVNNSKVTETV WLLLESHLQDEGSQENRSVSFLNEAPECIICPIEPPVECGGNHIGLQLVKLRLDAETERL LYCYSTTNNNFSIHSFSVVKEICFQRLKDTKSLFAKVLFSFPYEIEGKASFDTCNFFQNP TFELEVHSEQDYQVLMDAACISTSSHDLINIQVYYFNDYELIKPIMFDNHYQPGQGLKQD VPILTNVKYMIVCSTYGPPASTEFELLASIRLSSSWRLISGITLRSVNLIYGTYPYHCRN RFHWKETSDKLKIQMTLPTKKYSTNKLFIRVVPVESSARLRMRCNIFEPESALCVYECQE YRTCPSGGIVIPDLEVSRTNIVVLMIERSVPISSCLPTEGQLDELELFVGSSQKIRIEKY SDDVIPK

  • title: catalytic site
  • coordinates: C128,H271,D289
No Results
No Results
IDSitePeptideScoreMethod
YMR154C186 SGKQLSLKSN0.991unsp

YMR154C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India