YMR297W | carboxypeptidase C PRC1

_IDPredictionOTHERSPmTPCS_Position
YMR297WSP0.0088920.9902490.000860CS pos: 18-19. TLA-KA. Pr: 0.5041
No Results

  • Fasta :-

    >YMR297W MKAFTSLLCGLGLSTTLAKAISLQRPLGLDKDVLLQAAEKFGLDLDLDHLLKELDSNVLD AWAQIEHLYPNQVMSLETSTKPKFPEAIKTKKDWDFVVKNDAIENYQLRVNKIKDPKILG IDPNVTQYTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFELGPS SIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQ FPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTDPLTQYNYYE PMACGEGGEPSVLPSEECSAMEDSLERCLGLIESCYDSQSVWSCVPATIYCNNAQLAPYQ RTGRNVYDIRKDCEGGNLCYPTLQDIDDYLNQDYVKEAVGAEVDHYESCNFDINRNFLFA GDWMKPYHTAVTDLLNQDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNW TASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPENALSMVNEWIHGGFSL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YMR297W.fa Sequence name : YMR297W Sequence length : 532 VALUES OF COMPUTED PARAMETERS Coef20 : 4.501 CoefTot : 0.486 ChDiff : -35 ZoneTo : 29 KR : 3 DE : 0 CleavSite : 35 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.406 1.512 0.233 0.526 MesoH : 0.219 0.290 -0.200 0.316 MuHd_075 : 25.985 19.042 7.434 7.037 MuHd_095 : 12.581 9.090 5.124 2.911 MuHd_100 : 15.460 12.608 4.356 4.506 MuHd_105 : 23.493 18.177 6.200 6.343 Hmax_075 : 14.400 18.900 2.800 5.320 Hmax_095 : 16.500 12.775 3.749 5.690 Hmax_100 : 15.500 14.500 4.331 4.940 Hmax_105 : 16.683 17.733 3.277 5.763 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6559 0.3441 DFMC : 0.5006 0.4994
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 532 YMR297W MKAFTSLLCGLGLSTTLAKAISLQRPLGLDKDVLLQAAEKFGLDLDLDHLLKELDSNVLDAWAQIEHLYPNQVMSLETST 80 KPKFPEAIKTKKDWDFVVKNDAIENYQLRVNKIKDPKILGIDPNVTQYTGYLDVEDEDKHFFFWTFESRNDPAKDPVILW 160 LNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQ 240 FPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTDPLTQYNYYEPMACGEGGEPSVLPSEECSA 320 MEDSLERCLGLIESCYDSQSVWSCVPATIYCNNAQLAPYQRTGRNVYDIRKDCEGGNLCYPTLQDIDDYLNQDYVKEAVG 400 AEVDHYESCNFDINRNFLFAGDWMKPYHTAVTDLLNQDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNW 480 TASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPENALSMVNEWIHGGFSL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YMR297W 2 -----MK|AF 0.068 . YMR297W 19 LSTTLAK|AI 0.075 . YMR297W 25 KAISLQR|PL 0.081 . YMR297W 31 RPLGLDK|DV 0.071 . YMR297W 40 LLQAAEK|FG 0.060 . YMR297W 52 DLDHLLK|EL 0.057 . YMR297W 81 SLETSTK|PK 0.065 . YMR297W 83 ETSTKPK|FP 0.095 . YMR297W 89 KFPEAIK|TK 0.057 . YMR297W 91 PEAIKTK|KD 0.065 . YMR297W 92 EAIKTKK|DW 0.155 . YMR297W 99 DWDFVVK|ND 0.061 . YMR297W 109 IENYQLR|VN 0.084 . YMR297W 112 YQLRVNK|IK 0.155 . YMR297W 114 LRVNKIK|DP 0.081 . YMR297W 117 NKIKDPK|IL 0.073 . YMR297W 139 DVEDEDK|HF 0.058 . YMR297W 149 FWTFESR|ND 0.074 . YMR297W 154 SRNDPAK|DP 0.081 . YMR297W 187 SIGPDLK|PI 0.072 . YMR297W 228 NTVAAGK|DV 0.093 . YMR297W 247 FPEYVNK|GQ 0.073 . YMR297W 274 SEILSHK|DR 0.067 . YMR297W 276 ILSHKDR|NF 0.090 . YMR297W 327 MEDSLER|CL 0.097 . YMR297W 361 QLAPYQR|TG 0.080 . YMR297W 364 PYQRTGR|NV 0.410 . YMR297W 370 RNVYDIR|KD 0.092 . YMR297W 371 NVYDIRK|DC 0.097 . YMR297W 396 LNQDYVK|EA 0.075 . YMR297W 415 CNFDINR|NF 0.091 . YMR297W 425 FAGDWMK|PY 0.073 . YMR297W 448 LVYAGDK|DF 0.058 . YMR297W 458 CNWLGNK|AW 0.069 . YMR297W 467 TDVLPWK|YD 0.074 . YMR297W 476 EEFASQK|VR 0.054 . YMR297W 478 FASQKVR|NW 0.161 . YMR297W 493 EVAGEVK|SY 0.068 . YMR297W 496 GEVKSYK|HF 0.066 . YMR297W 502 KHFTYLR|VF 0.080 . ____________________________^_________________

  • Fasta :-

    >YMR297W ATGAAAGCATTCACCAGTTTACTATGTGGACTAGGCCTGTCCACTACACTCGCTAAGGCC ATCTCATTGCAAAGACCGTTGGGTCTAGATAAGGACGTTTTGCTGCAAGCTGCGGAAAAA TTTGGTTTGGACCTCGACCTGGATCATCTCTTGAAGGAGTTGGACTCCAATGTATTGGAC GCTTGGGCCCAAATAGAGCATTTGTACCCAAACCAGGTTATGAGCCTTGAAACTTCCACT AAGCCAAAATTCCCTGAAGCAATCAAAACGAAGAAAGACTGGGACTTTGTGGTCAAGAAT GACGCAATTGAAAACTATCAGCTTCGTGTCAACAAGATTAAGGACCCTAAAATCCTGGGC ATTGACCCAAATGTCACACAGTACACGGGTTACTTGGATGTGGAAGACGAGGACAAGCAT TTCTTCTTTTGGACTTTTGAAAGTAGAAACGATCCTGCAAAGGATCCGGTCATCCTTTGG TTGAACGGGGGTCCAGGTTGTTCTTCACTAACCGGGCTGTTCTTTGAATTAGGACCCTCA TCCATTGGACCTGATTTGAAACCCATCGGGAACCCTTACTCTTGGAACAGCAATGCCACC GTGATCTTCCTTGACCAGCCTGTCAACGTTGGGTTCTCGTATTCCGGGTCCTCAGGTGTT TCCAACACTGTCGCCGCTGGTAAGGATGTCTATAACTTCTTGGAGTTGTTCTTCGATCAG TTCCCTGAATACGTCAACAAGGGCCAAGATTTCCACATCGCTGGGGAATCCTACGCCGGC CATTACATCCCTGTTTTTGCCTCTGAAATTTTGTCTCACAAGGACAGAAACTTCAACTTA ACCTCCGTCTTGATCGGAAATGGCCTCACTGACCCATTGACTCAGTATAACTATTACGAA CCAATGGCCTGTGGTGAAGGTGGCGAACCATCTGTTTTGCCCTCGGAGGAATGCTCTGCT ATGGAAGACTCTTTGGAACGTTGTTTGGGCTTGATCGAGTCGTGCTATGACTCGCAATCC GTCTGGTCCTGTGTTCCAGCTACCATTTATTGTAATAACGCCCAATTGGCTCCTTACCAA CGTACCGGCAGAAACGTTTACGATATCAGGAAGGATTGTGAAGGTGGCAATTTGTGCTAC CCAACGTTACAAGATATCGACGACTACTTAAACCAGGACTACGTCAAAGAAGCTGTCGGT GCGGAGGTTGACCACTACGAATCCTGTAACTTCGATATCAACAGAAATTTCCTGTTTGCG GGTGATTGGATGAAGCCTTACCACACCGCCGTAACAGATCTTTTGAATCAAGACCTACCC ATTCTGGTATATGCAGGCGATAAAGATTTCATCTGTAACTGGTTGGGTAATAAGGCGTGG ACGGATGTCTTGCCATGGAAGTACGACGAAGAATTTGCAAGCCAAAAAGTACGTAACTGG ACTGCTTCTATCACCGACGAGGTCGCTGGTGAAGTCAAATCCTACAAGCACTTCACCTAT TTGAGAGTCTTCAATGGTGGCCACATGGTTCCATTTGACGTCCCTGAAAACGCCTTAAGT ATGGTTAACGAATGGATCCACGGTGGTTTCTCCTTATAA
  • Download Fasta

  • Fasta :-

    MKAFTSLLCGLGLSTTLAKAISLQRPLGLDKDVLLQAAEKFGLDLDLDHLLKELDSNVLD AWAQIEHLYPNQVMSLETSTKPKFPEAIKTKKDWDFVVKNDAIENYQLRVNKIKDPKILG IDPNVTQYTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFELGPS SIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQ FPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTDPLTQYNYYE PMACGEGGEPSVLPSEECSAMEDSLERCLGLIESCYDSQSVWSCVPATIYCNNAQLAPYQ RTGRNVYDIRKDCEGGNLCYPTLQDIDDYLNQDYVKEAVGAEVDHYESCNFDINRNFLFA GDWMKPYHTAVTDLLNQDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNW TASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPENALSMVNEWIHGGFSL

    No Results
No Results
No Results
IDSitePeptideScoreMethod
YMR297W272 SSEILSHKDR0.991unsp

YMR297W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India