YMR314W | proteasome core particle subunit alpha 6

_IDPredictionOTHERSPmTPCS_Position
YMR314WOTHER0.9993930.0000710.000535
No Results

  • Fasta :-

    >YMR314W MFRNNYDGDTVTFSPTGRLFQVEYALEAIKQGSVTVGLRSNTHAVLVALKRNADELSSYQ KKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNT QSYGGRPYGVGLLIIGYDKSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDTFI KIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIVGKDTPFTIYDGEAVAKYI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YMR314W.fa Sequence name : YMR314W Sequence length : 234 VALUES OF COMPUTED PARAMETERS Coef20 : 3.805 CoefTot : -0.290 ChDiff : 0 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.382 1.012 -0.075 0.478 MesoH : -1.006 0.036 -0.474 0.146 MuHd_075 : 31.530 14.540 6.815 6.242 MuHd_095 : 25.757 7.416 3.880 5.287 MuHd_100 : 24.686 7.676 4.118 5.127 MuHd_105 : 11.889 3.197 2.104 2.530 Hmax_075 : 2.800 2.012 -1.235 2.345 Hmax_095 : 4.400 -0.800 -1.588 1.794 Hmax_100 : 0.900 -0.900 -1.841 2.140 Hmax_105 : -0.117 -0.700 -2.335 1.937 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8291 0.1709 DFMC : 0.8734 0.1266
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 234 YMR314W MFRNNYDGDTVTFSPTGRLFQVEYALEAIKQGSVTVGLRSNTHAVLVALKRNADELSSYQKKIIKCDEHMGLSLAGLAPD 80 ARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDKSGAHLLEFQPSGNVTELYGTA 160 IGARSQGAKTYLERTLDTFIKIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIVGKDTPFTIYDGEAVAKYI 240 ................................................................................ 80 ................................................................................ 160 .......................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YMR314W 3 ----MFR|NN 0.099 . YMR314W 18 TFSPTGR|LF 0.095 . YMR314W 30 YALEAIK|QG 0.057 . YMR314W 39 SVTVGLR|SN 0.100 . YMR314W 50 AVLVALK|RN 0.058 . YMR314W 51 VLVALKR|NA 0.151 . YMR314W 61 ELSSYQK|KI 0.077 . YMR314W 62 LSSYQKK|II 0.193 . YMR314W 65 YQKKIIK|CD 0.067 . YMR314W 82 GLAPDAR|VL 0.118 . YMR314W 89 VLSNYLR|QQ 0.081 . YMR314W 101 SSLVFNR|KL 0.107 . YMR314W 102 SLVFNRK|LA 0.078 . YMR314W 107 RKLAVER|AG 0.074 . YMR314W 115 GHLLCDK|AQ 0.054 . YMR314W 118 LCDKAQK|NT 0.061 . YMR314W 126 TQSYGGR|PY 0.162 . YMR314W 139 LIIGYDK|SG 0.066 . YMR314W 164 GTAIGAR|SQ 0.182 . YMR314W 169 ARSQGAK|TY 0.070 . YMR314W 174 AKTYLER|TL 0.089 . YMR314W 181 TLDTFIK|ID 0.065 . YMR314W 191 NPDELIK|AG 0.061 . YMR314W 202 AISQSLR|DE 0.118 . YMR314W 218 SIAIVGK|DT 0.076 . YMR314W 232 DGEAVAK|YI 0.079 . ____________________________^_________________

  • Fasta :-

    >YMR314W ATGTTCAGGAACAATTACGACGGGGACACAGTCACTTTTTCTCCTACAGGCCGTCTGTTC CAAGTGGAATACGCCTTGGAAGCTATTAAACAAGGGAGCGTCACTGTGGGGTTACGTTCG AACACTCATGCTGTTTTAGTAGCGTTGAAAAGAAATGCAGACGAATTGTCATCATACCAG AAAAAAATCATCAAATGTGACGAGCACATGGGGCTCTCGTTAGCCGGGTTGGCTCCAGAT GCTAGAGTTTTAAGTAATTATTTGAGACAACAGTGTAATTACTCCAGCTTAGTTTTTAAC AGAAAGCTTGCCGTCGAGAGAGCAGGTCATTTGCTTTGCGATAAAGCACAGAAAAATACA CAATCCTATGGGGGCAGACCCTACGGTGTTGGTTTGTTGATCATCGGGTATGACAAGAGC GGTGCTCATCTTTTAGAATTCCAACCTTCCGGAAATGTCACAGAACTATATGGTACAGCT ATTGGCGCAAGAAGCCAAGGGGCAAAGACTTATCTAGAGAGAACTTTAGACACGTTTATA AAAATTGACGGGAACCCGGATGAACTAATCAAAGCTGGCGTCGAGGCTATCAGCCAGTCT CTAAGGGACGAATCCTTGACTGTAGACAATCTTTCAATCGCCATCGTGGGTAAGGATACG CCTTTTACAATTTACGATGGAGAAGCTGTTGCTAAATACATCTAG
  • Download Fasta

  • Fasta :-

    MFRNNYDGDTVTFSPTGRLFQVEYALEAIKQGSVTVGLRSNTHAVLVALKRNADELSSYQ KKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNT QSYGGRPYGVGLLIIGYDKSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDTFI KIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIVGKDTPFTIYDGEAVAKYI

  • title: active site
  • coordinates: S33,L49,R51,K62
No Results
No Results
No Results

YMR314W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India