_IDPredictionOTHERSPmTPCS_Position
YNL045WmTP0.1012580.0001020.898641CS pos: 31-32. SRN-IH. Pr: 0.5161
No Results
  • Fasta :-

    >YNL045W MFLLPFVIRHSSSIYLPTLRFRGLLTVISRNIHISTPHKMLPLSIEQRRPSRSPEYDQST LSNYKDFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHI DGSKADFQIEQRKEPLGSRLVINNASCNDNFTLNIQFRTTDKCTALQWLNSKQTKGGKPY VFSQLEAIHARSLFPCFDTPSVKSTFTASIESPLPVVFSGIRIEDTSKDTNIYRFEQKVP IPAYLIGIASGDLSSAPIGPRSTVYTEPFRLKDCQWEFENDVEKFIQTAEKIIFEYEWGT YDILVNVDSYPYGGMESPNMTFATPTLIAHDRSNIDVIAHELAHSWSGNLVTNCSWNHFW LNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNSIDSMKDPERFSTLVQNLNDNTDP DDAFSTVPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYPE KKEILDSVDWETWLYKPGMPPRPHFITALADNVYQLADKWVEMAQHLKTTEDFRSEFNAI DIKDFNSNQLVLFLETLTQNGHSNKKPKDFDWAKFPVASRALLDIYQDNIVKSQNAEVVF KMFKFQIFAKLQEEYKHLADWLGTVGRMKFVRPGYRLLNSVDRRLALATFDKFKDTYHPI CKALVKQDLGL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YNL045W.fa Sequence name : YNL045W Sequence length : 671 VALUES OF COMPUTED PARAMETERS Coef20 : 4.557 CoefTot : -0.195 ChDiff : -10 ZoneTo : 45 KR : 5 DE : 0 CleavSite : 40 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.165 1.041 0.114 0.515 MesoH : -0.497 0.184 -0.341 0.214 MuHd_075 : 23.120 15.478 6.937 6.490 MuHd_095 : 33.104 22.524 9.088 7.903 MuHd_100 : 29.237 21.045 7.367 7.172 MuHd_105 : 25.698 21.891 7.140 6.999 Hmax_075 : 16.333 18.550 3.923 3.978 Hmax_095 : 17.300 17.900 3.413 5.970 Hmax_100 : 13.300 17.900 2.698 5.970 Hmax_105 : 11.300 15.500 1.606 5.240 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0452 0.9548 DFMC : 0.0538 0.9462 This protein is probably imported in mitochondria. f(Ser) = 0.1333 f(Arg) = 0.0889 CMi = 0.68571 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 671 YNL045W MFLLPFVIRHSSSIYLPTLRFRGLLTVISRNIHISTPHKMLPLSIEQRRPSRSPEYDQSTLSNYKDFAVLHTDLNLSVSF 80 EKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDGSKADFQIEQRKEPLGSRLVINNASCNDNFTLNIQFRTT 160 DKCTALQWLNSKQTKGGKPYVFSQLEAIHARSLFPCFDTPSVKSTFTASIESPLPVVFSGIRIEDTSKDTNIYRFEQKVP 240 IPAYLIGIASGDLSSAPIGPRSTVYTEPFRLKDCQWEFENDVEKFIQTAEKIIFEYEWGTYDILVNVDSYPYGGMESPNM 320 TFATPTLIAHDRSNIDVIAHELAHSWSGNLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNSIDS 400 MKDPERFSTLVQNLNDNTDPDDAFSTVPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYPE 480 KKEILDSVDWETWLYKPGMPPRPHFITALADNVYQLADKWVEMAQHLKTTEDFRSEFNAIDIKDFNSNQLVLFLETLTQN 560 GHSNKKPKDFDWAKFPVASRALLDIYQDNIVKSQNAEVVFKMFKFQIFAKLQEEYKHLADWLGTVGRMKFVRPGYRLLNS 640 VDRRLALATFDKFKDTYHPICKALVKQDLGL 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YNL045W 9 LLPFVIR|HS 0.093 . YNL045W 20 IYLPTLR|FR 0.073 . YNL045W 22 LPTLRFR|GL 0.096 . YNL045W 30 LLTVISR|NI 0.099 . YNL045W 39 HISTPHK|ML 0.070 . YNL045W 48 PLSIEQR|RP 0.090 . YNL045W 49 LSIEQRR|PS 0.130 . YNL045W 52 EQRRPSR|SP 0.367 . YNL045W 65 STLSNYK|DF 0.060 . YNL045W 82 LSVSFEK|SA 0.094 . YNL045W 94 SVTFQLK|KL 0.065 . YNL045W 95 VTFQLKK|LH 0.082 . YNL045W 100 KKLHEGK|NK 0.079 . YNL045W 102 LHEGKNK|SD 0.103 . YNL045W 124 VHIDGSK|AD 0.063 . YNL045W 132 DFQIEQR|KE 0.064 . YNL045W 133 FQIEQRK|EP 0.071 . YNL045W 139 KEPLGSR|LV 0.077 . YNL045W 158 TLNIQFR|TT 0.156 . YNL045W 162 QFRTTDK|CT 0.060 . YNL045W 172 LQWLNSK|QT 0.067 . YNL045W 175 LNSKQTK|GG 0.088 . YNL045W 178 KQTKGGK|PY 0.059 . YNL045W 191 LEAIHAR|SL 0.247 . YNL045W 203 FDTPSVK|ST 0.078 . YNL045W 222 VVFSGIR|IE 0.072 . YNL045W 228 RIEDTSK|DT 0.072 . YNL045W 234 KDTNIYR|FE 0.089 . YNL045W 238 IYRFEQK|VP 0.062 . YNL045W 261 SAPIGPR|ST 0.119 . YNL045W 270 VYTEPFR|LK 0.069 . YNL045W 272 TEPFRLK|DC 0.072 . YNL045W 284 FENDVEK|FI 0.095 . YNL045W 291 FIQTAEK|II 0.077 . YNL045W 332 TLIAHDR|SN 0.229 . YNL045W 371 WTVYLER|RI 0.120 . YNL045W 372 TVYLERR|II 0.207 . YNL045W 383 IHGEPTR|HF 0.104 . YNL045W 402 NSIDSMK|DP 0.069 . YNL045W 406 SMKDPER|FS 0.097 . YNL045W 431 STVPYEK|GF 0.064 . YNL045W 446 ETILGGK|AE 0.056 . YNL045W 454 EFDPFIR|HY 0.083 . YNL045W 458 FIRHYFK|KF 0.063 . YNL045W 459 IRHYFKK|FA 0.441 . YNL045W 462 YFKKFAK|KS 0.063 . YNL045W 463 FKKFAKK|SL 0.207 . YNL045W 481 YEFYPEK|KE 0.054 . YNL045W 482 EFYPEKK|EI 0.106 . YNL045W 496 WETWLYK|PG 0.064 . YNL045W 502 KPGMPPR|PH 0.102 . YNL045W 519 VYQLADK|WV 0.080 . YNL045W 528 EMAQHLK|TT 0.072 . YNL045W 534 KTTEDFR|SE 0.110 . YNL045W 543 FNAIDIK|DF 0.066 . YNL045W 565 QNGHSNK|KP 0.063 . YNL045W 566 NGHSNKK|PK 0.082 . YNL045W 568 HSNKKPK|DF 0.135 . YNL045W 574 KDFDWAK|FP 0.070 . YNL045W 580 KFPVASR|AL 0.082 . YNL045W 592 YQDNIVK|SQ 0.067 . YNL045W 601 NAEVVFK|MF 0.068 . YNL045W 604 VVFKMFK|FQ 0.062 . YNL045W 610 KFQIFAK|LQ 0.070 . YNL045W 616 KLQEEYK|HL 0.076 . YNL045W 627 WLGTVGR|MK 0.090 . YNL045W 629 GTVGRMK|FV 0.096 . YNL045W 632 GRMKFVR|PG 0.122 . YNL045W 636 FVRPGYR|LL 0.079 . YNL045W 643 LLNSVDR|RL 0.088 . YNL045W 644 LNSVDRR|LA 0.199 . YNL045W 652 ALATFDK|FK 0.076 . YNL045W 654 ATFDKFK|DT 0.075 . YNL045W 662 TYHPICK|AL 0.070 . YNL045W 666 ICKALVK|QD 0.060 . ____________________________^_________________
  • Fasta :-

    >YNL045W ATGTTCTTGCTTCCATTTGTCATTCGTCATTCCAGCTCTATTTACCTGCCCACGCTTCGA TTTCGAGGTTTACTTACTGTAATCTCAAGAAACATACACATTTCCACCCCTCATAAAATG TTGCCTCTTTCAATTGAGCAGAGAAGACCTTCCCGCTCCCCCGAATACGATCAGTCTACT TTATCAAATTATAAGGACTTCGCAGTTCTTCACACCGATTTAAACCTGTCTGTTTCCTTC GAAAAGTCAGCCATTTCAGGGAGCGTTACATTCCAATTGAAAAAACTGCACGAAGGTAAA AATAAATCGGATGAATTACATCTGGATACATCCTATTTGGATGTCCAGGAGGTTCATATT GATGGTTCCAAGGCAGATTTTCAAATTGAGCAAAGAAAGGAGCCATTGGGCTCCAGGTTA GTCATCAATAACGCTTCTTGCAACGATAACTTTACCTTGAATATTCAATTTCGTACGACT GACAAGTGCACCGCTTTGCAATGGTTGAACAGCAAGCAAACCAAGGGCGGTAAACCGTAC GTGTTTTCACAGTTGGAAGCTATTCATGCGAGGTCTTTGTTCCCCTGCTTTGATACTCCC TCTGTGAAGTCTACTTTCACTGCATCTATCGAGTCCCCACTACCAGTGGTTTTTTCAGGC ATCAGGATTGAAGATACAAGCAAGGATACTAATATTTACAGATTTGAACAGAAAGTCCCT ATCCCAGCCTACCTGATCGGTATTGCTTCCGGTGATTTGTCAAGCGCTCCAATTGGACCT CGTTCCACAGTTTACACTGAACCATTTCGTTTGAAAGATTGTCAATGGGAATTTGAAAAC GATGTAGAGAAATTCATTCAAACTGCAGAGAAAATTATCTTTGAATACGAGTGGGGCACT TATGATATCTTAGTTAACGTCGATTCGTACCCTTACGGCGGTATGGAGTCTCCGAATATG ACTTTTGCTACGCCCACCTTGATTGCACATGACAGATCCAACATTGATGTCATCGCCCAT GAACTTGCTCACTCATGGTCTGGTAACTTAGTGACCAATTGTTCGTGGAATCATTTTTGG TTGAATGAAGGTTGGACCGTTTACTTAGAAAGAAGAATTATTGGTGCCATTCATGGCGAA CCAACTAGACATTTCAGTGCTCTGATTGGTTGGAGCGATTTGCAGAATTCTATTGATTCT ATGAAAGATCCTGAAAGATTTTCCACTTTGGTACAAAACTTGAACGATAACACTGACCCT GACGATGCCTTTTCCACTGTTCCGTACGAAAAGGGGTTCAACTTACTATTTCACTTGGAA ACTATTTTGGGTGGTAAGGCTGAATTTGATCCATTTATTAGACACTATTTCAAGAAGTTT GCCAAAAAATCATTGGATACTTTCCAGTTTTTGGATACTTTGTATGAGTTCTATCCCGAA AAGAAAGAAATTTTGGATTCCGTTGACTGGGAAACTTGGCTGTATAAACCAGGTATGCCA CCAAGGCCTCATTTTATTACGGCTTTGGCTGATAATGTTTATCAATTGGCTGACAAGTGG GTCGAAATGGCTCAACATTTGAAAACCACAGAGGATTTCCGGTCTGAATTTAACGCTATT GACATTAAGGATTTTAATTCAAATCAATTGGTTTTGTTCTTGGAAACTTTGACACAAAAT GGCCATTCCAACAAGAAACCAAAAGATTTTGACTGGGCCAAGTTTCCCGTGGCATCTAGG GCACTGTTAGATATCTATCAAGATAACATTGTTAAATCACAGAACGCGGAAGTTGTTTTC AAGATGTTCAAATTTCAGATCTTTGCCAAGCTGCAAGAAGAATATAAGCATTTGGCCGAT TGGTTGGGAACTGTAGGTAGAATGAAGTTTGTCCGTCCCGGTTACAGACTATTAAACTCT GTAGACCGTCGATTGGCACTTGCAACTTTCGACAAATTCAAGGACACGTATCATCCAATC TGTAAAGCTCTTGTGAAACAAGATTTAGGTCTTTGA
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  • Fasta :-

    MFLLPFVIRHSSSIYLPTLRFRGLLTVISRNIHISTPHKMLPLSIEQRRPSRSPEYDQST LSNYKDFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHI DGSKADFQIEQRKEPLGSRLVINNASCNDNFTLNIQFRTTDKCTALQWLNSKQTKGGKPY VFSQLEAIHARSLFPCFDTPSVKSTFTASIESPLPVVFSGIRIEDTSKDTNIYRFEQKVP IPAYLIGIASGDLSSAPIGPRSTVYTEPFRLKDCQWEFENDVEKFIQTAEKIIFEYEWGT YDILVNVDSYPYGGMESPNMTFATPTLIAHDRSNIDVIAHELAHSWSGNLVTNCSWNHFW LNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNSIDSMKDPERFSTLVQNLNDNTDP DDAFSTVPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYPE KKEILDSVDWETWLYKPGMPPRPHFITALADNVYQLADKWVEMAQHLKTTEDFRSEFNAI DIKDFNSNQLVLFLETLTQNGHSNKKPKDFDWAKFPVASRALLDIYQDNIVKSQNAEVVF KMFKFQIFAKLQEEYKHLADWLGTVGRMKFVRPGYRLLNSVDRRLALATFDKFKDTYHPI CKALVKQDLGL

  • title: Zn binding site
  • coordinates: H340,H344,E363
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YNL045W226 TRIEDTSKDT0.995unspYNL045W226 TRIEDTSKDT0.995unspYNL045W226 TRIEDTSKDT0.995unspYNL045W400 SNSIDSMKDP0.998unspYNL045W563 SQNGHSNKKP0.994unspYNL045W51 SQRRPSRSPE0.997unspYNL045W53 SRPSRSPEYD0.995unsp

YNL045W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India