YNL123W | Nma111p

_IDPredictionOTHERSPmTPCS_Position
YNL123WOTHER0.9997600.0000470.000193
No Results

  • Fasta :-

    >YNL123W MTISLSNIKKRDHSKISDGTSGESSLVKRKQLESATGDQEEEYTDHEIIIEPLHFANNNN TVLTDSENYLRWQNTISNVVKSVVSIHFSQVAPFDCDSALVSEATGFVVDAKLGIILTNR HVVGPGPFVGYVVFDNHEECDVIPIYRDPVHDFGFLKFDPKNIKYSKIKALTLKPSLAKV GSEIRVVGNDAGEKLSILAGFISRIDRNAPEYGELTYNDFNTEYIQAAASASGGSSGSPV VNIDGYAVALQAGGSTEASTDFFLPLDRILRALICIQTNKPITRGTIQVQWLLKPYDECR RLGLTSERESEARAKFPENIGLLVAETVLREGPGYDKIKEGDTLISINGETISSFMQVDK IQDENVGKEIQLVIQRGGVECTVTCTVGDLHAITPHRYVEVCGATFHELSYQMARFYALP VRGVFLSSASGSFNFDSKERVGWIVDSIDNKETPDLDTFIEIMKTIPDRKRVTVRYHHLT DQHSPLVTSIYIDRHWCNEFRVYTRNDTTGIWDYKNVADPLPADALKPRSAKIIPIPVNN EKVAKLSSSLCTVATMAAVPLDSLSADILKTSGLIIDAEKGYVLVSRRVVPHDCLDTFVT IADSLVVPATVEFLHPTHNFAIVKYDPELVKAPLITPKLSTTRMKRGDKLQFIGFTQNDR IVTSETTVTDISSVSIPSNLIPRYRATNLEAISIDCNVSTRCNSGILTDNDGTVRGLWLP FLGERLENKEKVYLMGLDIMDCREVIDILKNGGKPRVSIVDAGFGSISVLQARIRGVPEE WIMRMEHESNNRLQFITVSRVSYTEDKIHLETGDVILSVNGKLVTEMNDLNGVVSSADGI LPSAMLDFKVVRDGNIVDLKIKTVEVQETDRFVIFAGSILQKPHHAVLQAMVDVPKGVYC TFRGESSPALQYGISATNFITHVNEIETPDLDTFLKVVKTIPDNSYCKMRLMTFDNVPFA ISLKTNYHYFPTAELKRDNITHKWIEKEFTGNSQSEK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YNL123W.fa Sequence name : YNL123W Sequence length : 997 VALUES OF COMPUTED PARAMETERS Coef20 : 3.905 CoefTot : 0.121 ChDiff : -22 ZoneTo : 11 KR : 3 DE : 0 CleavSite : 13 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.212 1.606 0.186 0.579 MesoH : -0.148 0.791 -0.191 0.307 MuHd_075 : 5.853 3.356 2.406 3.033 MuHd_095 : 23.643 15.219 5.026 5.284 MuHd_100 : 19.830 12.363 3.804 4.399 MuHd_105 : 13.805 7.513 2.258 3.047 Hmax_075 : -2.900 5.000 -1.580 2.290 Hmax_095 : -0.088 6.500 -2.717 1.960 Hmax_100 : -3.500 6.600 -2.681 2.090 Hmax_105 : -4.433 0.800 -4.019 0.782 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8791 0.1209 DFMC : 0.8851 0.1149
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 997 YNL123W MTISLSNIKKRDHSKISDGTSGESSLVKRKQLESATGDQEEEYTDHEIIIEPLHFANNNNTVLTDSENYLRWQNTISNVV 80 KSVVSIHFSQVAPFDCDSALVSEATGFVVDAKLGIILTNRHVVGPGPFVGYVVFDNHEECDVIPIYRDPVHDFGFLKFDP 160 KNIKYSKIKALTLKPSLAKVGSEIRVVGNDAGEKLSILAGFISRIDRNAPEYGELTYNDFNTEYIQAAASASGGSSGSPV 240 VNIDGYAVALQAGGSTEASTDFFLPLDRILRALICIQTNKPITRGTIQVQWLLKPYDECRRLGLTSERESEARAKFPENI 320 GLLVAETVLREGPGYDKIKEGDTLISINGETISSFMQVDKIQDENVGKEIQLVIQRGGVECTVTCTVGDLHAITPHRYVE 400 VCGATFHELSYQMARFYALPVRGVFLSSASGSFNFDSKERVGWIVDSIDNKETPDLDTFIEIMKTIPDRKRVTVRYHHLT 480 DQHSPLVTSIYIDRHWCNEFRVYTRNDTTGIWDYKNVADPLPADALKPRSAKIIPIPVNNEKVAKLSSSLCTVATMAAVP 560 LDSLSADILKTSGLIIDAEKGYVLVSRRVVPHDCLDTFVTIADSLVVPATVEFLHPTHNFAIVKYDPELVKAPLITPKLS 640 TTRMKRGDKLQFIGFTQNDRIVTSETTVTDISSVSIPSNLIPRYRATNLEAISIDCNVSTRCNSGILTDNDGTVRGLWLP 720 FLGERLENKEKVYLMGLDIMDCREVIDILKNGGKPRVSIVDAGFGSISVLQARIRGVPEEWIMRMEHESNNRLQFITVSR 800 VSYTEDKIHLETGDVILSVNGKLVTEMNDLNGVVSSADGILPSAMLDFKVVRDGNIVDLKIKTVEVQETDRFVIFAGSIL 880 QKPHHAVLQAMVDVPKGVYCTFRGESSPALQYGISATNFITHVNEIETPDLDTFLKVVKTIPDNSYCKMRLMTFDNVPFA 960 ISLKTNYHYFPTAELKRDNITHKWIEKEFTGNSQSEK 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .....P.......................................................................... 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ..................................... 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ YNL123W 9 ISLSNIK|KR 0.056 . YNL123W 10 SLSNIKK|RD 0.119 . YNL123W 11 LSNIKKR|DH 0.487 . YNL123W 15 KKRDHSK|IS 0.073 . YNL123W 28 GESSLVK|RK 0.061 . YNL123W 29 ESSLVKR|KQ 0.183 . YNL123W 30 SSLVKRK|QL 0.109 . YNL123W 71 DSENYLR|WQ 0.077 . YNL123W 81 TISNVVK|SV 0.152 . YNL123W 112 GFVVDAK|LG 0.060 . YNL123W 120 GIILTNR|HV 0.105 . YNL123W 147 DVIPIYR|DP 0.080 . YNL123W 157 HDFGFLK|FD 0.066 . YNL123W 161 FLKFDPK|NI 0.059 . YNL123W 164 FDPKNIK|YS 0.060 . YNL123W 167 KNIKYSK|IK 0.058 . YNL123W 169 IKYSKIK|AL 0.070 . YNL123W 174 IKALTLK|PS 0.069 . YNL123W 179 LKPSLAK|VG 0.064 . YNL123W 185 KVGSEIR|VV 0.098 . YNL123W 194 GNDAGEK|LS 0.056 . YNL123W 204 LAGFISR|ID 0.079 . YNL123W 207 FISRIDR|NA 0.314 . YNL123W 268 FFLPLDR|IL 0.071 . YNL123W 271 PLDRILR|AL 0.201 . YNL123W 280 ICIQTNK|PI 0.072 . YNL123W 284 TNKPITR|GT 0.155 . YNL123W 294 QVQWLLK|PY 0.064 . YNL123W 300 KPYDECR|RL 0.085 . YNL123W 301 PYDECRR|LG 0.087 . YNL123W 308 LGLTSER|ES 0.078 . YNL123W 313 ERESEAR|AK 0.113 . YNL123W 315 ESEARAK|FP 0.081 . YNL123W 330 VAETVLR|EG 0.068 . YNL123W 337 EGPGYDK|IK 0.054 . YNL123W 339 PGYDKIK|EG 0.067 . YNL123W 360 SFMQVDK|IQ 0.067 . YNL123W 368 QDENVGK|EI 0.067 . YNL123W 376 IQLVIQR|GG 0.072 . YNL123W 397 HAITPHR|YV 0.196 . YNL123W 415 LSYQMAR|FY 0.098 . YNL123W 422 FYALPVR|GV 0.108 . YNL123W 438 SFNFDSK|ER 0.061 . YNL123W 440 NFDSKER|VG 0.071 . YNL123W 451 VDSIDNK|ET 0.066 . YNL123W 464 TFIEIMK|TI 0.060 . YNL123W 469 MKTIPDR|KR 0.087 . YNL123W 470 KTIPDRK|RV 0.092 . YNL123W 471 TIPDRKR|VT 0.147 . YNL123W 475 RKRVTVR|YH 0.111 . YNL123W 494 TSIYIDR|HW 0.106 . YNL123W 501 HWCNEFR|VY 0.088 . YNL123W 505 EFRVYTR|ND 0.094 . YNL123W 515 TGIWDYK|NV 0.082 . YNL123W 527 LPADALK|PR 0.068 . YNL123W 529 ADALKPR|SA 0.211 . YNL123W 532 LKPRSAK|II 0.141 . YNL123W 542 IPVNNEK|VA 0.060 . YNL123W 545 NNEKVAK|LS 0.067 . YNL123W 570 LSADILK|TS 0.070 . YNL123W 580 LIIDAEK|GY 0.058 . YNL123W 587 GYVLVSR|RV 0.096 . YNL123W 588 YVLVSRR|VV 0.120 . YNL123W 624 HNFAIVK|YD 0.065 . YNL123W 631 YDPELVK|AP 0.054 . YNL123W 638 APLITPK|LS 0.062 . YNL123W 643 PKLSTTR|MK 0.081 . YNL123W 645 LSTTRMK|RG 0.067 . YNL123W 646 STTRMKR|GD 0.531 *ProP* YNL123W 649 RMKRGDK|LQ 0.120 . YNL123W 660 GFTQNDR|IV 0.088 . YNL123W 683 PSNLIPR|YR 0.100 . YNL123W 685 NLIPRYR|AT 0.092 . YNL123W 701 DCNVSTR|CN 0.124 . YNL123W 715 DNDGTVR|GL 0.074 . YNL123W 725 LPFLGER|LE 0.071 . YNL123W 729 GERLENK|EK 0.057 . YNL123W 731 RLENKEK|VY 0.069 . YNL123W 743 LDIMDCR|EV 0.135 . YNL123W 750 EVIDILK|NG 0.058 . YNL123W 754 ILKNGGK|PR 0.060 . YNL123W 756 KNGGKPR|VS 0.095 . YNL123W 773 ISVLQAR|IR 0.111 . YNL123W 775 VLQARIR|GV 0.131 . YNL123W 784 PEEWIMR|ME 0.078 . YNL123W 792 EHESNNR|LQ 0.068 . YNL123W 800 QFITVSR|VS 0.083 . YNL123W 807 VSYTEDK|IH 0.058 . YNL123W 822 ILSVNGK|LV 0.084 . YNL123W 849 SAMLDFK|VV 0.078 . YNL123W 852 LDFKVVR|DG 0.099 . YNL123W 860 GNIVDLK|IK 0.062 . YNL123W 862 IVDLKIK|TV 0.088 . YNL123W 871 EVQETDR|FV 0.115 . YNL123W 882 AGSILQK|PH 0.085 . YNL123W 896 AMVDVPK|GV 0.083 . YNL123W 903 GVYCTFR|GE 0.098 . YNL123W 936 DLDTFLK|VV 0.070 . YNL123W 939 TFLKVVK|TI 0.059 . YNL123W 948 PDNSYCK|MR 0.059 . YNL123W 950 NSYCKMR|LM 0.087 . YNL123W 964 PFAISLK|TN 0.064 . YNL123W 976 FPTAELK|RD 0.058 . YNL123W 977 PTAELKR|DN 0.203 . YNL123W 983 RDNITHK|WI 0.103 . YNL123W 987 THKWIEK|EF 0.062 . YNL123W 997 GNSQSEK|-- 0.083 . ____________________________^_________________

  • Fasta :-

    >YNL123W ATGACCATATCGTTGAGCAATATAAAGAAAAGAGACCATTCTAAAATTTCCGATGGAACT TCTGGTGAATCATCGCTTGTAAAAAGGAAACAGTTGGAAAGCGCCACCGGAGATCAAGAG GAAGAATATACAGACCATGAAATCATTATAGAGCCGTTGCACTTTGCTAATAATAATAAC ACTGTACTCACAGATTCAGAAAATTATCTAAGATGGCAAAATACCATCTCCAACGTTGTT AAATCAGTGGTTTCCATTCATTTTTCACAAGTTGCGCCATTCGATTGCGATTCTGCTTTG GTATCTGAAGCTACCGGATTTGTCGTGGATGCTAAATTAGGTATAATTCTGACCAATAGG CACGTCGTTGGTCCTGGTCCGTTCGTAGGCTACGTAGTTTTCGATAATCATGAAGAATGC GATGTTATACCAATTTACAGAGATCCTGTTCATGATTTTGGGTTCCTCAAATTCGATCCG AAAAACATAAAATATTCTAAGATCAAAGCGTTAACGCTAAAACCAAGTTTGGCTAAGGTC GGCTCAGAAATTAGAGTTGTCGGTAATGATGCCGGTGAGAAATTAAGTATCCTAGCAGGT TTTATTAGTAGAATTGACAGGAACGCTCCAGAATATGGTGAGCTGACATACAATGACTTC AATACAGAATATATTCAAGCTGCTGCATCTGCTTCTGGCGGTTCAAGTGGTTCTCCAGTC GTAAATATAGATGGGTATGCTGTGGCTTTACAGGCAGGTGGCTCTACAGAGGCATCTACT GATTTTTTTTTACCGTTAGATAGAATTCTTAGAGCGTTAATTTGCATCCAAACCAACAAA CCTATCACACGTGGTACGATTCAAGTTCAATGGCTGCTGAAGCCTTATGACGAGTGTAGA AGATTAGGTTTAACTTCAGAGAGAGAAAGTGAGGCTCGTGCTAAATTTCCCGAAAATATC GGACTGTTGGTAGCAGAAACCGTTTTAAGAGAAGGCCCAGGCTATGATAAAATTAAAGAA GGTGATACTCTAATTTCAATAAACGGTGAAACCATATCTTCTTTCATGCAAGTGGATAAA ATTCAAGATGAAAATGTTGGGAAGGAAATCCAATTGGTTATTCAAAGGGGCGGTGTCGAA TGTACTGTCACCTGCACTGTTGGTGATTTACATGCTATCACCCCTCATCGTTATGTAGAG GTTTGTGGTGCGACTTTTCATGAATTATCATATCAAATGGCAAGGTTTTATGCGCTACCT GTCAGGGGTGTATTTTTAAGTAGTGCATCAGGGTCTTTCAACTTTGATTCAAAAGAAAGA GTGGGTTGGATTGTGGATTCTATAGACAATAAGGAAACCCCCGACTTAGATACATTTATT GAAATTATGAAAACTATTCCAGATCGTAAGCGCGTTACTGTACGATACCACCATCTAACA GATCAGCATTCTCCACTTGTTACTTCTATTTACATTGACCGTCATTGGTGCAATGAATTC AGAGTTTACACAAGGAACGATACAACTGGTATTTGGGATTACAAAAATGTTGCTGATCCA CTTCCAGCCGATGCGTTGAAACCTCGTTCGGCCAAAATTATTCCTATTCCTGTTAATAAT GAAAAAGTTGCAAAATTGTCATCATCGTTATGTACAGTGGCTACAATGGCAGCAGTTCCA TTGGATTCACTTTCTGCTGATATTTTAAAAACATCAGGCTTAATCATTGATGCTGAAAAA GGTTATGTCCTAGTGTCCAGAAGGGTAGTTCCACATGATTGTCTTGATACTTTTGTCACC ATTGCAGATTCCCTTGTAGTTCCAGCCACAGTAGAATTTCTCCATCCAACTCACAACTTC GCTATTGTTAAATATGATCCAGAGTTAGTAAAGGCTCCACTAATCACTCCCAAGCTATCT ACCACCAGAATGAAACGTGGTGATAAGCTTCAGTTTATAGGTTTTACCCAGAATGATAGA ATTGTTACTTCAGAGACCACTGTCACCGATATTTCCTCTGTAAGTATTCCAAGTAATTTA ATTCCGAGGTACCGTGCCACTAATTTAGAAGCTATATCTATCGACTGCAACGTTAGCACC AGATGTAATTCCGGTATTTTGACAGATAATGATGGTACAGTAAGAGGTTTATGGCTTCCA TTTTTAGGCGAAAGATTAGAAAATAAAGAAAAGGTTTATTTGATGGGATTAGATATAATG GACTGTAGGGAAGTTATAGATATCTTAAAAAATGGCGGTAAACCAAGAGTAAGTATAGTT GATGCTGGGTTCGGTTCAATTTCCGTTCTGCAAGCCAGAATTAGAGGTGTGCCCGAAGAA TGGATCATGCGTATGGAACATGAATCAAATAACAGGCTACAGTTTATCACTGTTTCTAGA GTTTCTTATACAGAAGACAAGATTCATTTAGAGACCGGTGACGTCATTTTATCTGTGAAC GGAAAATTAGTCACTGAAATGAATGATTTGAATGGAGTTGTAAGCTCAGCTGATGGTATT TTGCCATCAGCCATGTTAGATTTTAAAGTTGTTCGTGATGGTAATATTGTTGATTTGAAA ATTAAAACCGTGGAAGTTCAGGAAACCGACCGTTTTGTAATATTTGCAGGTAGTATCTTA CAAAAGCCGCATCATGCTGTTTTGCAAGCTATGGTTGATGTTCCAAAGGGTGTCTACTGT ACATTCAGGGGAGAATCGTCACCGGCGCTCCAGTACGGTATATCTGCCACAAACTTCATA ACTCATGTCAATGAAATTGAAACACCTGATCTAGATACATTTTTGAAAGTTGTCAAAACA ATCCCTGATAATAGTTATTGTAAAATGAGGTTAATGACTTTCGACAATGTGCCCTTCGCT ATTTCACTGAAAACGAATTATCATTACTTCCCTACTGCAGAATTGAAGAGGGACAACATC ACGCACAAATGGATTGAAAAGGAATTTACCGGCAACAGCCAAAGTGAAAAATAG
  • Download Fasta

  • Fasta :-

    MTISLSNIKKRDHSKISDGTSGESSLVKRKQLESATGDQEEEYTDHEIIIEPLHFANNNN TVLTDSENYLRWQNTISNVVKSVVSIHFSQVAPFDCDSALVSEATGFVVDAKLGIILTNR HVVGPGPFVGYVVFDNHEECDVIPIYRDPVHDFGFLKFDPKNIKYSKIKALTLKPSLAKV GSEIRVVGNDAGEKLSILAGFISRIDRNAPEYGELTYNDFNTEYIQAAASASGGSSGSPV VNIDGYAVALQAGGSTEASTDFFLPLDRILRALICIQTNKPITRGTIQVQWLLKPYDECR RLGLTSERESEARAKFPENIGLLVAETVLREGPGYDKIKEGDTLISINGETISSFMQVDK IQDENVGKEIQLVIQRGGVECTVTCTVGDLHAITPHRYVEVCGATFHELSYQMARFYALP VRGVFLSSASGSFNFDSKERVGWIVDSIDNKETPDLDTFIEIMKTIPDRKRVTVRYHHLT DQHSPLVTSIYIDRHWCNEFRVYTRNDTTGIWDYKNVADPLPADALKPRSAKIIPIPVNN EKVAKLSSSLCTVATMAAVPLDSLSADILKTSGLIIDAEKGYVLVSRRVVPHDCLDTFVT IADSLVVPATVEFLHPTHNFAIVKYDPELVKAPLITPKLSTTRMKRGDKLQFIGFTQNDR IVTSETTVTDISSVSIPSNLIPRYRATNLEAISIDCNVSTRCNSGILTDNDGTVRGLWLP FLGERLENKEKVYLMGLDIMDCREVIDILKNGGKPRVSIVDAGFGSISVLQARIRGVPEE WIMRMEHESNNRLQFITVSRVSYTEDKIHLETGDVILSVNGKLVTEMNDLNGVVSSADGI LPSAMLDFKVVRDGNIVDLKIKTVEVQETDRFVIFAGSILQKPHHAVLQAMVDVPKGVYC TFRGESSPALQYGISATNFITHVNEIETPDLDTFLKVVKTIPDNSYCKMRLMTFDNVPFA ISLKTNYHYFPTAELKRDNITHKWIEKEFTGNSQSEK

  • title: protein binding site
  • coordinates: R301,L302,G303,L304,S306,S354,F355,V358,D359
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YNL123W306 SLGLTSERES0.997unspYNL123W306 SLGLTSERES0.997unspYNL123W306 SLGLTSERES0.997unspYNL123W310 SSERESEARA0.998unspYNL123W758 SKPRVSIVDA0.997unspYNL123W802 SVSRVSYTED0.998unspYNL123W14 SKRDHSKISD0.996unspYNL123W21 SSDGTSGESS0.995unsp

YNL123W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India