YNL223W | cysteine protease ATG4

_IDPredictionOTHERSPmTPCS_Position
YNL223WOTHER0.9918150.0036170.004569
No Results

  • Fasta :-

    >YNL223W MQRWLQLWKMDLVQKVSHGVFEGSSEEPAALMNHDYIVLGEVYPERDEESGAEQCEQDCR YRGEAVSDGFLSSLFGREISSYTKEFLLDVQSRVNFTYRTRFVPIARAPDGPSPLSLNLL VRTNPISTIEDYIANPDCFNTDIGWGCMIRTGQSLLGNALQILHLGRDFRVNGNESLERE SKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSIQSLIYGFPECGIDDC IVSVSSGDIYENEVEKVFAENPNSRILFLLGVKLGINAVNESYRESICGILSSTQSVGIA GGRPSSSLYFFGYQGNEFLHFDPHIPQPAVEDSFVESCHTSKFGKLQLSEMDPSMLIGIL IKGEKDWQQWKLEVAESAIINVLAKRMDDFDVSCSMDDVESVSSNSMKKDASNNENLGVL EGDYVDIGAIFPHTTNTEDVDEYDCFQDIHCKKQKIVVMGNTHTVNANLTDYEVEGVLVE KETVGIHSPIDEKC
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YNL223W.fa Sequence name : YNL223W Sequence length : 494 VALUES OF COMPUTED PARAMETERS Coef20 : 3.925 CoefTot : -0.044 ChDiff : -37 ZoneTo : 10 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.282 1.247 0.270 0.482 MesoH : -0.346 0.304 -0.318 0.234 MuHd_075 : 3.232 7.852 3.336 1.261 MuHd_095 : 32.103 22.467 8.574 7.635 MuHd_100 : 18.967 15.880 5.469 5.274 MuHd_105 : 2.389 6.793 3.196 1.945 Hmax_075 : -4.550 2.400 -3.454 1.030 Hmax_095 : 8.050 10.762 -1.020 4.515 Hmax_100 : 6.600 10.500 -1.986 4.060 Hmax_105 : -6.200 5.100 -3.621 1.210 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8849 0.1151 DFMC : 0.8822 0.1178
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 494 YNL223W MQRWLQLWKMDLVQKVSHGVFEGSSEEPAALMNHDYIVLGEVYPERDEESGAEQCEQDCRYRGEAVSDGFLSSLFGREIS 80 SYTKEFLLDVQSRVNFTYRTRFVPIARAPDGPSPLSLNLLVRTNPISTIEDYIANPDCFNTDIGWGCMIRTGQSLLGNAL 160 QILHLGRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSIQSLIYGFPECGIDDC 240 IVSVSSGDIYENEVEKVFAENPNSRILFLLGVKLGINAVNESYRESICGILSSTQSVGIAGGRPSSSLYFFGYQGNEFLH 320 FDPHIPQPAVEDSFVESCHTSKFGKLQLSEMDPSMLIGILIKGEKDWQQWKLEVAESAIINVLAKRMDDFDVSCSMDDVE 400 SVSSNSMKKDASNNENLGVLEGDYVDIGAIFPHTTNTEDVDEYDCFQDIHCKKQKIVVMGNTHTVNANLTDYEVEGVLVE 480 KETVGIHSPIDEKC 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .............. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YNL223W 3 ----MQR|WL 0.081 . YNL223W 9 RWLQLWK|MD 0.058 . YNL223W 15 KMDLVQK|VS 0.065 . YNL223W 46 GEVYPER|DE 0.113 . YNL223W 60 QCEQDCR|YR 0.106 . YNL223W 62 EQDCRYR|GE 0.077 . YNL223W 77 LSSLFGR|EI 0.158 . YNL223W 84 EISSYTK|EF 0.055 . YNL223W 93 LLDVQSR|VN 0.097 . YNL223W 99 RVNFTYR|TR 0.083 . YNL223W 101 NFTYRTR|FV 0.099 . YNL223W 107 RFVPIAR|AP 0.077 . YNL223W 122 SLNLLVR|TN 0.088 . YNL223W 150 GWGCMIR|TG 0.075 . YNL223W 167 QILHLGR|DF 0.103 . YNL223W 170 HLGRDFR|VN 0.242 . YNL223W 179 GNESLER|ES 0.073 . YNL223W 182 SLERESK|FV 0.226 . YNL223W 210 GTELSDK|RP 0.059 . YNL223W 211 TELSDKR|PG 0.155 . YNL223W 223 GPAATAR|SI 0.233 . YNL223W 256 YENEVEK|VF 0.060 . YNL223W 265 AENPNSR|IL 0.086 . YNL223W 273 LFLLGVK|LG 0.053 . YNL223W 284 AVNESYR|ES 0.116 . YNL223W 303 VGIAGGR|PS 0.076 . YNL223W 342 ESCHTSK|FG 0.066 . YNL223W 345 HTSKFGK|LQ 0.068 . YNL223W 362 LIGILIK|GE 0.064 . YNL223W 365 ILIKGEK|DW 0.068 . YNL223W 371 KDWQQWK|LE 0.057 . YNL223W 385 IINVLAK|RM 0.068 . YNL223W 386 INVLAKR|MD 0.141 . YNL223W 408 VSSNSMK|KD 0.074 . YNL223W 409 SSNSMKK|DA 0.279 . YNL223W 452 FQDIHCK|KQ 0.061 . YNL223W 453 QDIHCKK|QK 0.111 . YNL223W 455 IHCKKQK|IV 0.096 . YNL223W 481 EGVLVEK|ET 0.060 . YNL223W 493 HSPIDEK|C- 0.059 . ____________________________^_________________

  • Fasta :-

    >YNL223W ATGCAGAGGTGGCTACAACTGTGGAAAATGGATTTGGTACAAAAAGTGTCTCATGGCGTT TTTGAAGGCTCGTCCGAAGAACCGGCTGCTCTTATGAATCATGATTATATAGTATTAGGG GAAGTATATCCTGAGCGAGACGAAGAATCTGGCGCTGAACAATGTGAACAAGACTGTCGA TATCGCGGTGAAGCGGTTAGTGACGGGTTTTTAAGCTCTCTTTTTGGTAGGGAAATTTCT TCTTACACAAAGGAATTTCTTTTGGATGTACAATCAAGGGTCAACTTTACATATCGGACA AGATTTGTTCCTATAGCAAGGGCGCCAGATGGGCCTTCACCTTTAAGTCTAAATTTATTA GTACGTACAAATCCGATCAGTACAATAGAGGACTATATAGCAAATCCTGATTGCTTTAAC ACTGATATTGGGTGGGGGTGTATGATAAGGACAGGACAAAGTTTGTTGGGGAATGCCTTA CAAATCCTTCATTTGGGCAGAGATTTCAGGGTAAATGGTAACGAAAGTCTGGAAAGAGAA TCAAAATTTGTAAATTGGTTTAATGACACGCCTGAGGCTCCATTTTCGTTACATAACTTT GTTTCTGCAGGTACAGAACTCTCTGATAAAAGACCAGGTGAATGGTTTGGTCCCGCAGCT ACGGCAAGGAGTATACAATCTTTAATATATGGCTTCCCCGAATGTGGCATCGATGATTGT ATAGTATCTGTTTCATCCGGCGATATCTATGAAAATGAAGTTGAAAAAGTATTTGCTGAG AATCCAAATAGTAGAATATTGTTCTTGTTGGGCGTGAAGCTCGGGATTAATGCGGTAAAT GAGAGCTATAGAGAAAGTATATGTGGTATCTTAAGTTCAACACAGTCAGTAGGCATTGCC GGCGGTAGGCCGTCTTCATCGTTGTATTTTTTTGGTTATCAAGGAAATGAATTTTTACAT TTCGATCCTCATATTCCTCAACCGGCAGTAGAAGATTCATTTGTAGAGTCGTGCCATACC AGTAAATTTGGTAAATTGCAACTATCGGAAATGGATCCCTCGATGCTCATTGGTATTTTG ATTAAGGGCGAAAAAGACTGGCAACAATGGAAGCTAGAAGTTGCAGAATCTGCTATTATC AATGTTCTTGCTAAGAGAATGGATGACTTTGATGTGAGTTGTAGTATGGATGACGTGGAA AGTGTAAGTTCTAACTCAATGAAGAAAGATGCAAGCAATAATGAAAATCTCGGAGTACTA GAGGGAGACTACGTAGATATTGGTGCAATATTCCCACACACAACAAATACAGAAGATGTA GACGAATATGATTGTTTTCAAGATATTCATTGCAAGAAACAGAAGATTGTTGTTATGGGA AACACACACACTGTTAATGCGAATTTAACAGATTATGAAGTAGAAGGCGTCCTTGTAGAG AAGGAAACGGTAGGTATTCACAGTCCTATTGATGAAAAATGCTAG
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  • Fasta :-

    MQRWLQLWKMDLVQKVSHGVFEGSSEEPAALMNHDYIVLGEVYPERDEESGAEQCEQDCR YRGEAVSDGFLSSLFGREISSYTKEFLLDVQSRVNFTYRTRFVPIARAPDGPSPLSLNLL VRTNPISTIEDYIANPDCFNTDIGWGCMIRTGQSLLGNALQILHLGRDFRVNGNESLERE SKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSIQSLIYGFPECGIDDC IVSVSSGDIYENEVEKVFAENPNSRILFLLGVKLGINAVNESYRESICGILSSTQSVGIA GGRPSSSLYFFGYQGNEFLHFDPHIPQPAVEDSFVESCHTSKFGKLQLSEMDPSMLIGIL IKGEKDWQQWKLEVAESAIINVLAKRMDDFDVSCSMDDVESVSSNSMKKDASNNENLGVL EGDYVDIGAIFPHTTNTEDVDEYDCFQDIHCKKQKIVVMGNTHTVNANLTDYEVEGVLVE KETVGIHSPIDEKC

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YNL223W424 YLEGDYVDIG0.991unspYNL223W424 YLEGDYVDIG0.991unspYNL223W424 YLEGDYVDIG0.991unspYNL223W488 SVGIHSPIDE0.998unspYNL223W349 SKLQLSEMDP0.994unspYNL223W406 SVSSNSMKKD0.993unsp

YNL223W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India