YOR261C | proteasome regulatory particle lid subunit RPN8

_IDPredictionOTHERSPmTPCS_Position
YOR261COTHER0.9446240.0538450.001531
No Results

  • Fasta :-

    >YOR261C MSLQHEKVTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSFALPFEEDE KNSDVWFLDHNYIENMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQNNPLL LIVDVKQQGVGLPTDAYVAIEQVKDDGTSTEKTFLHLPCTIEAEEAEEIGVEHLLRDVRD QAAGGLSIRLTNQLKSLKGLQSKLKDVVEYLDKVINKELPINHTILGKLQDVFNLLPNLG TPDDDEIDVENHDRINISNNLQKALTVKTNDELMVIYISNLVRSIIAFDDLIENKIQNKK IQEQRVKDKQSKVSDDSESESGDKEATAPLIQRKNKKN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YOR261C.fa Sequence name : YOR261C Sequence length : 338 VALUES OF COMPUTED PARAMETERS Coef20 : 3.996 CoefTot : 0.123 ChDiff : -10 ZoneTo : 19 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.418 1.535 -0.015 0.491 MesoH : -1.471 -0.038 -0.613 0.096 MuHd_075 : 13.596 10.022 3.348 3.031 MuHd_095 : 6.156 9.676 0.773 1.681 MuHd_100 : 6.367 5.781 0.340 0.728 MuHd_105 : 7.582 4.396 0.974 1.288 Hmax_075 : 11.083 15.225 1.471 4.958 Hmax_095 : 8.925 17.325 0.962 4.848 Hmax_100 : 9.600 11.400 0.258 4.070 Hmax_105 : 8.400 13.533 0.916 4.410 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9955 0.0045 DFMC : 0.9965 0.0035
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 338 YOR261C MSLQHEKVTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSFALPFEEDEKNSDVWFLDHNYIENMNEMC 80 KKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQNNPLLLIVDVKQQGVGLPTDAYVAIEQVKDDGTSTEKTFLHLPCT 160 IEAEEAEEIGVEHLLRDVRDQAAGGLSIRLTNQLKSLKGLQSKLKDVVEYLDKVINKELPINHTILGKLQDVFNLLPNLG 240 TPDDDEIDVENHDRINISNNLQKALTVKTNDELMVIYISNLVRSIIAFDDLIENKIQNKKIQEQRVKDKQSKVSDDSESE 320 SGDKEATAPLIQRKNKKN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YOR261C 7 MSLQHEK|VT 0.062 . YOR261C 24 ALDHYER|TQ 0.072 . YOR261C 28 YERTQTK|EN 0.064 . YOR261C 31 TQTKENK|RC 0.065 . YOR261C 32 QTKENKR|CV 0.373 . YOR261C 47 ANSSTIR|VT 0.080 . YOR261C 61 PFEEDEK|NS 0.056 . YOR261C 81 NMNEMCK|KI 0.075 . YOR261C 82 MNEMCKK|IN 0.103 . YOR261C 86 CKKINAK|EK 0.067 . YOR261C 88 KINAKEK|LI 0.100 . YOR261C 98 WYHSGPK|LR 0.055 . YOR261C 100 HSGPKLR|AS 0.138 . YOR261C 105 LRASDLK|IN 0.069 . YOR261C 111 KINELFK|KY 0.066 . YOR261C 112 INELFKK|YT 0.105 . YOR261C 126 LLIVDVK|QQ 0.085 . YOR261C 144 VAIEQVK|DD 0.080 . YOR261C 152 DGTSTEK|TF 0.053 . YOR261C 176 GVEHLLR|DV 0.189 . YOR261C 179 HLLRDVR|DQ 0.271 . YOR261C 189 AGGLSIR|LT 0.079 . YOR261C 195 RLTNQLK|SL 0.073 . YOR261C 198 NQLKSLK|GL 0.067 . YOR261C 203 LKGLQSK|LK 0.068 . YOR261C 205 GLQSKLK|DV 0.106 . YOR261C 213 VVEYLDK|VI 0.061 . YOR261C 217 LDKVINK|EL 0.065 . YOR261C 228 NHTILGK|LQ 0.057 . YOR261C 254 DVENHDR|IN 0.082 . YOR261C 263 ISNNLQK|AL 0.084 . YOR261C 268 QKALTVK|TN 0.068 . YOR261C 283 YISNLVR|SI 0.157 . YOR261C 295 DDLIENK|IQ 0.059 . YOR261C 299 ENKIQNK|KI 0.067 . YOR261C 300 NKIQNKK|IQ 0.099 . YOR261C 305 KKIQEQR|VK 0.101 . YOR261C 307 IQEQRVK|DK 0.068 . YOR261C 309 EQRVKDK|QS 0.081 . YOR261C 312 VKDKQSK|VS 0.074 . YOR261C 324 ESESGDK|EA 0.062 . YOR261C 333 TAPLIQR|KN 0.082 . YOR261C 334 APLIQRK|NK 0.081 . YOR261C 336 LIQRKNK|KN 0.160 . YOR261C 337 IQRKNKK|N- 0.127 . ____________________________^_________________

  • Fasta :-

    >YOR261C ATGTCTCTACAACACGAGAAAGTTACCATTGCACCACTAGTTTTGCTATCTGCTTTGGAT CATTATGAGCGTACGCAGACAAAAGAAAACAAAAGATGCGTTGGTGTCATCTTAGGTGAT GCTAACAGTTCCACTATCAGAGTCACTAATTCCTTTGCCTTACCGTTTGAAGAAGATGAG AAAAACTCTGACGTGTGGTTTTTAGACCATAATTATATTGAAAACATGAATGAAATGTGT AAAAAGATTAATGCCAAGGAAAAACTCATTGGATGGTATCATAGTGGTCCTAAATTAAGG GCTTCTGACCTCAAGATTAATGAGCTGTTTAAAAAATATACTCAGAATAATCCGCTATTA TTAATTGTTGATGTCAAACAACAAGGTGTTGGTTTACCAACAGATGCATATGTCGCGATT GAGCAAGTTAAGGATGATGGTACGTCTACAGAAAAGACGTTTCTTCATTTGCCTTGTACT ATTGAGGCCGAAGAAGCTGAAGAAATTGGTGTAGAACACTTATTGAGAGACGTACGTGAT CAAGCAGCAGGTGGCTTATCTATCCGGTTGACCAACCAATTAAAATCTTTGAAAGGATTA CAAAGCAAACTAAAAGACGTTGTCGAGTACTTAGACAAAGTCATTAATAAGGAATTACCG ATAAACCACACTATATTGGGCAAGCTACAAGATGTTTTCAACCTTTTACCAAATCTGGGA ACACCTGATGATGACGAAATAGATGTGGAGAATCATGACAGAATTAATATTTCAAATAAC TTACAAAAGGCTTTAACTGTGAAAACTAATGATGAATTAATGGTTATATATATAAGCAAT TTGGTTAGGTCAATTATCGCGTTTGATGATTTGATTGAAAACAAAATTCAAAATAAAAAA ATTCAAGAACAAAGAGTAAAGGACAAACAATCAAAAGTCTCTGATGACAGTGAGAGTGAG AGTGGTGACAAAGAAGCAACTGCGCCATTGATCCAACGAAAGAACAAGAAAAATTAA
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  • Fasta :-

    MSLQHEKVTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSFALPFEEDE KNSDVWFLDHNYIENMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQNNPLL LIVDVKQQGVGLPTDAYVAIEQVKDDGTSTEKTFLHLPCTIEAEEAEEIGVEHLLRDVRD QAAGGLSIRLTNQLKSLKGLQSKLKDVVEYLDKVINKELPINHTILGKLQDVFNLLPNLG TPDDDEIDVENHDRINISNNLQKALTVKTNDELMVIYISNLVRSIIAFDDLIENKIQNKK IQEQRVKDKQSKVSDDSESESGDKEATAPLIQRKNKKN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YOR261C319 SDDSESESGD0.991unspYOR261C319 SDDSESESGD0.991unspYOR261C319 SDDSESESGD0.991unspYOR261C149 SDDGTSTEKT0.996unspYOR261C317 SVSDDSESES0.997unsp

YOR261C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India