YPL072W | putative ubiquitin-specific protease UBP16

_IDPredictionOTHERSPmTPCS_Position
YPL072WOTHER0.8688980.1168990.014203
No Results

  • Fasta :-

    >YPL072W MSWIKNVTESPTSLIKKVSCGLIIAASLYAIAPSLSALVFGDSKQSIGKYTTVGLINRGN DCFITSSLQGLAGIPRFVEYLKRIRTVLLELETKLSNNAKGDNPTVDNTTRHSRLENSSN SLAPLHESLTSLILDLISVKDRKTSISPKIVINTLESIFKSKISSKQNDAHEFTLILLQT LQEERSKLIDYSKQICNLNIPKFPFEGETSKFLVCLKCKGLSEPSYKQTFIRELSVPQQT SENLSNILAHDETEIIDDYSCLICQIRAILNHEEYRNFKDCTPDEILMLDRLKNYATKAP INENLPFEVEQYVKRYSKGNLQVSNIKGKVIKKDVVVQLPDILIVHLSRSTFNGITYSRN PCNVKFGERITLSEYTLAESGTITENRQVKYNLKSVVKHTGSHSSGHYMCYRRKTEIRFG KEDESSFRRAPVVNNEVNKNREQNVAHNDYKKSRYKKVKNALRYPYWQISDTAIKESTAS TVLNEQKYAYMLYYERVNK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YPL072W.fa Sequence name : YPL072W Sequence length : 499 VALUES OF COMPUTED PARAMETERS Coef20 : 4.268 CoefTot : -1.485 ChDiff : 17 ZoneTo : 78 KR : 7 DE : 3 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.753 1.929 0.395 0.679 MesoH : -0.009 0.631 -0.161 0.273 MuHd_075 : 29.689 20.755 8.209 6.786 MuHd_095 : 39.850 26.605 11.460 9.464 MuHd_100 : 38.146 29.696 11.977 9.606 MuHd_105 : 32.230 27.453 10.184 8.042 Hmax_075 : 7.000 23.683 0.437 7.100 Hmax_095 : 14.438 18.100 2.242 5.994 Hmax_100 : 15.900 18.900 3.473 7.030 Hmax_105 : 16.275 18.200 3.158 3.168 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8883 0.1117 DFMC : 0.8595 0.1405
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 499 YPL072W MSWIKNVTESPTSLIKKVSCGLIIAASLYAIAPSLSALVFGDSKQSIGKYTTVGLINRGNDCFITSSLQGLAGIPRFVEY 80 LKRIRTVLLELETKLSNNAKGDNPTVDNTTRHSRLENSSNSLAPLHESLTSLILDLISVKDRKTSISPKIVINTLESIFK 160 SKISSKQNDAHEFTLILLQTLQEERSKLIDYSKQICNLNIPKFPFEGETSKFLVCLKCKGLSEPSYKQTFIRELSVPQQT 240 SENLSNILAHDETEIIDDYSCLICQIRAILNHEEYRNFKDCTPDEILMLDRLKNYATKAPINENLPFEVEQYVKRYSKGN 320 LQVSNIKGKVIKKDVVVQLPDILIVHLSRSTFNGITYSRNPCNVKFGERITLSEYTLAESGTITENRQVKYNLKSVVKHT 400 GSHSSGHYMCYRRKTEIRFGKEDESSFRRAPVVNNEVNKNREQNVAHNDYKKSRYKKVKNALRYPYWQISDTAIKESTAS 480 TVLNEQKYAYMLYYERVNK 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YPL072W 5 --MSWIK|NV 0.076 . YPL072W 16 SPTSLIK|KV 0.084 . YPL072W 17 PTSLIKK|VS 0.103 . YPL072W 44 LVFGDSK|QS 0.060 . YPL072W 49 SKQSIGK|YT 0.083 . YPL072W 58 TVGLINR|GN 0.096 . YPL072W 76 GLAGIPR|FV 0.159 . YPL072W 82 RFVEYLK|RI 0.066 . YPL072W 83 FVEYLKR|IR 0.119 . YPL072W 85 EYLKRIR|TV 0.084 . YPL072W 94 LLELETK|LS 0.058 . YPL072W 100 KLSNNAK|GD 0.086 . YPL072W 111 TVDNTTR|HS 0.086 . YPL072W 114 NTTRHSR|LE 0.142 . YPL072W 140 LDLISVK|DR 0.060 . YPL072W 142 LISVKDR|KT 0.149 . YPL072W 143 ISVKDRK|TS 0.069 . YPL072W 149 KTSISPK|IV 0.103 . YPL072W 160 TLESIFK|SK 0.073 . YPL072W 162 ESIFKSK|IS 0.085 . YPL072W 166 KSKISSK|QN 0.097 . YPL072W 185 QTLQEER|SK 0.074 . YPL072W 187 LQEERSK|LI 0.062 . YPL072W 193 KLIDYSK|QI 0.061 . YPL072W 202 CNLNIPK|FP 0.073 . YPL072W 211 FEGETSK|FL 0.059 . YPL072W 217 KFLVCLK|CK 0.066 . YPL072W 219 LVCLKCK|GL 0.064 . YPL072W 227 LSEPSYK|QT 0.083 . YPL072W 232 YKQTFIR|EL 0.135 . YPL072W 267 CLICQIR|AI 0.095 . YPL072W 276 LNHEEYR|NF 0.106 . YPL072W 279 EEYRNFK|DC 0.154 . YPL072W 291 EILMLDR|LK 0.073 . YPL072W 293 LMLDRLK|NY 0.058 . YPL072W 298 LKNYATK|AP 0.067 . YPL072W 314 EVEQYVK|RY 0.064 . YPL072W 315 VEQYVKR|YS 0.230 . YPL072W 318 YVKRYSK|GN 0.123 . YPL072W 327 LQVSNIK|GK 0.060 . YPL072W 329 VSNIKGK|VI 0.073 . YPL072W 332 IKGKVIK|KD 0.066 . YPL072W 333 KGKVIKK|DV 0.230 . YPL072W 349 LIVHLSR|ST 0.157 . YPL072W 359 NGITYSR|NP 0.076 . YPL072W 365 RNPCNVK|FG 0.068 . YPL072W 369 NVKFGER|IT 0.069 . YPL072W 387 GTITENR|QV 0.150 . YPL072W 390 TENRQVK|YN 0.179 . YPL072W 394 QVKYNLK|SV 0.096 . YPL072W 398 NLKSVVK|HT 0.074 . YPL072W 412 GHYMCYR|RK 0.096 . YPL072W 413 HYMCYRR|KT 0.133 . YPL072W 414 YMCYRRK|TE 0.071 . YPL072W 418 RRKTEIR|FG 0.128 . YPL072W 421 TEIRFGK|ED 0.171 . YPL072W 428 EDESSFR|RA 0.087 . YPL072W 429 DESSFRR|AP 0.120 . YPL072W 439 VNNEVNK|NR 0.074 . YPL072W 441 NEVNKNR|EQ 0.095 . YPL072W 451 VAHNDYK|KS 0.062 . YPL072W 452 AHNDYKK|SR 0.157 . YPL072W 454 NDYKKSR|YK 0.108 . YPL072W 456 YKKSRYK|KV 0.082 . YPL072W 457 KKSRYKK|VK 0.383 . YPL072W 459 SRYKKVK|NA 0.096 . YPL072W 463 KVKNALR|YP 0.090 . YPL072W 475 ISDTAIK|ES 0.059 . YPL072W 487 TVLNEQK|YA 0.067 . YPL072W 496 YMLYYER|VN 0.064 . YPL072W 499 YYERVNK|-- 0.115 . ____________________________^_________________

  • Fasta :-

    >YPL072W ATGTCTTGGATAAAAAATGTAACAGAATCTCCGACTTCACTGATTAAAAAAGTTTCATGT GGTTTGATAATTGCTGCTTCTCTATATGCCATTGCACCCAGCCTAAGTGCGCTAGTCTTT GGGGATTCTAAGCAGAGTATTGGGAAGTACACGACAGTGGGCTTAATTAATCGTGGGAAT GATTGCTTCATAACATCATCTTTGCAAGGCCTGGCTGGAATACCTCGATTTGTAGAATAT TTGAAACGGATAAGAACGGTCCTTCTAGAATTAGAAACTAAGCTGTCAAATAATGCAAAA GGCGACAATCCTACAGTTGATAACACTACAAGGCATAGTCGACTTGAAAACTCGTCTAAT TCACTTGCCCCCTTACACGAAAGTCTTACCAGTTTAATTTTGGATTTGATATCTGTAAAA GATCGTAAGACGTCAATTTCTCCGAAAATAGTGATAAACACATTAGAGTCCATCTTTAAA TCAAAGATCTCATCCAAACAAAATGATGCACATGAATTTACATTAATATTACTACAAACA TTACAGGAAGAACGATCAAAATTGATCGATTACAGTAAACAGATATGTAATTTGAATATA CCAAAGTTTCCATTTGAGGGCGAGACTTCCAAGTTTCTAGTATGCCTTAAATGCAAGGGT CTATCAGAACCATCATACAAACAGACTTTCATCCGCGAACTGTCCGTACCACAACAAACA TCAGAGAATCTATCCAATATTCTAGCACACGATGAAACAGAAATCATAGACGACTATTCA TGCCTGATCTGCCAAATAAGAGCAATCTTAAACCATGAAGAATATAGAAATTTCAAGGAC TGTACCCCGGATGAAATTTTAATGTTGGACAGATTGAAAAATTATGCCACTAAAGCCCCA ATTAACGAAAATTTACCATTCGAAGTAGAACAGTACGTCAAGCGTTACTCAAAGGGCAAT TTGCAGGTATCTAATATAAAGGGAAAGGTCATCAAAAAAGATGTAGTAGTACAACTGCCA GACATATTAATTGTTCACTTATCGAGATCCACATTCAATGGTATTACATATTCTAGAAAT CCCTGCAATGTCAAATTTGGAGAAAGAATAACACTTTCTGAATATACATTGGCTGAGAGT GGGACAATAACAGAAAACAGGCAAGTCAAATATAATTTGAAAAGTGTTGTGAAACACACC GGTTCTCATTCGAGTGGACACTATATGTGTTACAGACGCAAGACTGAAATTCGTTTCGGG AAGGAGGATGAATCTTCCTTCAGAAGAGCACCAGTTGTCAACAATGAAGTTAACAAGAAT CGCGAGCAAAACGTTGCACATAATGATTACAAAAAAAGCAGATATAAAAAAGTCAAAAAC GCCCTGCGGTATCCTTATTGGCAAATATCTGATACCGCCATAAAGGAATCTACCGCTTCA ACTGTCTTGAATGAACAGAAATATGCTTATATGCTATACTACGAACGTGTAAATAAATAA
  • Download Fasta

  • Fasta :-

    MSWIKNVTESPTSLIKKVSCGLIIAASLYAIAPSLSALVFGDSKQSIGKYTTVGLINRGN DCFITSSLQGLAGIPRFVEYLKRIRTVLLELETKLSNNAKGDNPTVDNTTRHSRLENSSN SLAPLHESLTSLILDLISVKDRKTSISPKIVINTLESIFKSKISSKQNDAHEFTLILLQT LQEERSKLIDYSKQICNLNIPKFPFEGETSKFLVCLKCKGLSEPSYKQTFIRELSVPQQT SENLSNILAHDETEIIDDYSCLICQIRAILNHEEYRNFKDCTPDEILMLDRLKNYATKAP INENLPFEVEQYVKRYSKGNLQVSNIKGKVIKKDVVVQLPDILIVHLSRSTFNGITYSRN PCNVKFGERITLSEYTLAESGTITENRQVKYNLKSVVKHTGSHSSGHYMCYRRKTEIRFG KEDESSFRRAPVVNNEVNKNREQNVAHNDYKKSRYKKVKNALRYPYWQISDTAIKESTAS TVLNEQKYAYMLYYERVNK

  • title: Active Site
  • coordinates: N57,C62,H407,D471
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YPL072W164 SKSKISSKQN0.995unspYPL072W164 SKSKISSKQN0.995unspYPL072W164 SKSKISSKQN0.995unspYPL072W225 SLSEPSYKQT0.993unspYPL072W426 SEDESSFRRA0.992unspYPL072W113 STTRHSRLEN0.995unspYPL072W138 SLDLISVKDR0.996unsp

YPL072W      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India