YPL176C | Tre1p

_IDPredictionOTHERSPmTPCS_Position
YPL176COTHER0.9999360.0000560.000008
No Results

  • Fasta :-

    >YPL176C MVNTRGYTTLPNVEEPANNSQDELNSQDFEQAIGMPSEPPVYVEEMGMEEPQAPEAFSEK VQRFRMCFENNVVIPVKKNVVDPLAQMISLASEKFDLFLSKIGNVMVMRRIFYIMMMSII AALIIASDRLPNGKARGSNGSFSDHDLLLQYARKSIDLSKIERDLEYISSMPHMSGTSGD AAIRHYIKESFDKNGIRLAGEEEFMAYSNYPGNVSLRVYSKDDTEGFDIPLNEENFNPMS HNGQLNNIPVIYANKASLDDMASMQDQGLLNGDFILLVHYGDYVFQQMLTAQEYGAKAII FISEPYQDNKDVIQMKSVALPQYGTGDALTPEWEGSIRDPIDATEAKCLPKIPSIPISAN QGDKILAILSDTGVKFSNNLFSGSLNDCRLDLLVQTAIRERHPVHDIVGKIEGSEQAGRA IVIAAPRNSASYGTMYPSFGTVVLLSLIQLYQEMVYKFDWKPLRNIYFISFGGSEFNEAG ATELMEKRTEALKSEIYTIIDVGQIGIWDDSNNLEIQCHPLLVDLFQKNMTSRKFNVKVD NVHQFGDWTPYLAQGIPVAIISSPGVMNREHPIYTVEDKFDFIKDKLRDKKKGEVLSEIM LYLVEKSLELIDDPFIPFSISNYVDFLSTTLKDLQKECPDTVNFDEVFLGTTLWENTKLQ FEKWKSEWTELMYGAGTYIEPTIIAINRWSWNYLLSLIGVTQCLEEGLMDRTFYKNVIFG PKLWVDKGDPLRSWTFPEIRDTIAIKDWSSVQVQANTLGTILQNTARYFLENKNLHGINT NEF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/YPL176C.fa Sequence name : YPL176C Sequence length : 783 VALUES OF COMPUTED PARAMETERS Coef20 : 3.428 CoefTot : -0.671 ChDiff : -35 ZoneTo : 13 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.388 2.459 0.439 0.846 MesoH : -0.403 0.742 -0.339 0.254 MuHd_075 : 16.541 5.729 3.373 3.853 MuHd_095 : 14.791 18.320 5.366 3.761 MuHd_100 : 16.900 18.037 6.241 4.738 MuHd_105 : 20.657 15.329 6.638 5.260 Hmax_075 : 2.362 1.200 -1.743 2.240 Hmax_095 : 2.538 9.013 -0.179 2.476 Hmax_100 : 11.600 11.300 1.958 4.470 Hmax_105 : 5.200 6.000 -0.297 3.243 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9759 0.0241 DFMC : 0.9593 0.0407
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 783 YPL176C MVNTRGYTTLPNVEEPANNSQDELNSQDFEQAIGMPSEPPVYVEEMGMEEPQAPEAFSEKVQRFRMCFENNVVIPVKKNV 80 VDPLAQMISLASEKFDLFLSKIGNVMVMRRIFYIMMMSIIAALIIASDRLPNGKARGSNGSFSDHDLLLQYARKSIDLSK 160 IERDLEYISSMPHMSGTSGDAAIRHYIKESFDKNGIRLAGEEEFMAYSNYPGNVSLRVYSKDDTEGFDIPLNEENFNPMS 240 HNGQLNNIPVIYANKASLDDMASMQDQGLLNGDFILLVHYGDYVFQQMLTAQEYGAKAIIFISEPYQDNKDVIQMKSVAL 320 PQYGTGDALTPEWEGSIRDPIDATEAKCLPKIPSIPISANQGDKILAILSDTGVKFSNNLFSGSLNDCRLDLLVQTAIRE 400 RHPVHDIVGKIEGSEQAGRAIVIAAPRNSASYGTMYPSFGTVVLLSLIQLYQEMVYKFDWKPLRNIYFISFGGSEFNEAG 480 ATELMEKRTEALKSEIYTIIDVGQIGIWDDSNNLEIQCHPLLVDLFQKNMTSRKFNVKVDNVHQFGDWTPYLAQGIPVAI 560 ISSPGVMNREHPIYTVEDKFDFIKDKLRDKKKGEVLSEIMLYLVEKSLELIDDPFIPFSISNYVDFLSTTLKDLQKECPD 640 TVNFDEVFLGTTLWENTKLQFEKWKSEWTELMYGAGTYIEPTIIAINRWSWNYLLSLIGVTQCLEEGLMDRTFYKNVIFG 720 PKLWVDKGDPLRSWTFPEIRDTIAIKDWSSVQVQANTLGTILQNTARYFLENKNLHGINTNEF 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............................................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ YPL176C 5 --MVNTR|GY 0.102 . YPL176C 60 PEAFSEK|VQ 0.057 . YPL176C 63 FSEKVQR|FR 0.118 . YPL176C 65 EKVQRFR|MC 0.092 . YPL176C 77 NVVIPVK|KN 0.058 . YPL176C 78 VVIPVKK|NV 0.143 . YPL176C 94 ISLASEK|FD 0.055 . YPL176C 101 FDLFLSK|IG 0.060 . YPL176C 109 GNVMVMR|RI 0.120 . YPL176C 110 NVMVMRR|IF 0.143 . YPL176C 129 LIIASDR|LP 0.077 . YPL176C 134 DRLPNGK|AR 0.069 . YPL176C 136 LPNGKAR|GS 0.202 . YPL176C 153 LLLQYAR|KS 0.079 . YPL176C 154 LLQYARK|SI 0.124 . YPL176C 160 KSIDLSK|IE 0.065 . YPL176C 163 DLSKIER|DL 0.134 . YPL176C 184 SGDAAIR|HY 0.082 . YPL176C 188 AIRHYIK|ES 0.068 . YPL176C 193 IKESFDK|NG 0.060 . YPL176C 197 FDKNGIR|LA 0.151 . YPL176C 217 PGNVSLR|VY 0.101 . YPL176C 221 SLRVYSK|DD 0.088 . YPL176C 255 PVIYANK|AS 0.058 . YPL176C 297 AQEYGAK|AI 0.063 . YPL176C 310 EPYQDNK|DV 0.096 . YPL176C 316 KDVIQMK|SV 0.101 . YPL176C 338 EWEGSIR|DP 0.107 . YPL176C 347 IDATEAK|CL 0.076 . YPL176C 351 EAKCLPK|IP 0.064 . YPL176C 364 SANQGDK|IL 0.064 . YPL176C 375 LSDTGVK|FS 0.059 . YPL176C 389 GSLNDCR|LD 0.076 . YPL176C 399 LVQTAIR|ER 0.082 . YPL176C 401 QTAIRER|HP 0.076 . YPL176C 410 VHDIVGK|IE 0.069 . YPL176C 419 GSEQAGR|AI 0.099 . YPL176C 427 IVIAAPR|NS 0.085 . YPL176C 457 YQEMVYK|FD 0.071 . YPL176C 461 VYKFDWK|PL 0.064 . YPL176C 464 FDWKPLR|NI 0.086 . YPL176C 487 ATELMEK|RT 0.060 . YPL176C 488 TELMEKR|TE 0.097 . YPL176C 493 KRTEALK|SE 0.066 . YPL176C 528 LVDLFQK|NM 0.056 . YPL176C 533 QKNMTSR|KF 0.108 . YPL176C 534 KNMTSRK|FN 0.114 . YPL176C 538 SRKFNVK|VD 0.069 . YPL176C 569 SPGVMNR|EH 0.094 . YPL176C 579 IYTVEDK|FD 0.064 . YPL176C 584 DKFDFIK|DK 0.062 . YPL176C 586 FDFIKDK|LR 0.067 . YPL176C 588 FIKDKLR|DK 0.131 . YPL176C 590 KDKLRDK|KK 0.070 . YPL176C 591 DKLRDKK|KG 0.179 . YPL176C 592 KLRDKKK|GE 0.128 . YPL176C 606 MLYLVEK|SL 0.093 . YPL176C 632 FLSTTLK|DL 0.083 . YPL176C 636 TLKDLQK|EC 0.060 . YPL176C 658 TLWENTK|LQ 0.061 . YPL176C 663 TKLQFEK|WK 0.075 . YPL176C 665 LQFEKWK|SE 0.104 . YPL176C 688 TIIAINR|WS 0.106 . YPL176C 711 EEGLMDR|TF 0.074 . YPL176C 715 MDRTFYK|NV 0.091 . YPL176C 722 NVIFGPK|LW 0.061 . YPL176C 727 PKLWVDK|GD 0.057 . YPL176C 732 DKGDPLR|SW 0.110 . YPL176C 740 WTFPEIR|DT 0.121 . YPL176C 746 RDTIAIK|DW 0.090 . YPL176C 767 ILQNTAR|YF 0.096 . YPL176C 773 RYFLENK|NL 0.063 . ____________________________^_________________

  • Fasta :-

    >YPL176C ATGGTGAATACTAGGGGCTACACTACTCTTCCGAATGTTGAAGAACCAGCAAATAACTCA CAAGATGAGCTAAACTCGCAGGACTTTGAGCAAGCTATAGGAATGCCATCAGAACCCCCG GTATATGTGGAAGAGATGGGGATGGAAGAACCGCAGGCTCCGGAAGCCTTTAGTGAGAAA GTCCAGCGATTTCGTATGTGTTTTGAAAATAACGTGGTGATTCCAGTAAAGAAAAATGTA GTGGATCCGCTAGCACAAATGATTTCCCTGGCCTCTGAGAAATTCGATTTGTTCTTAAGT AAAATAGGTAATGTTATGGTAATGAGGAGAATATTTTACATCATGATGATGTCTATCATT GCAGCGTTGATTATTGCGAGTGATAGGTTACCGAATGGAAAAGCTCGAGGTTCAAATGGA TCATTCTCGGACCATGATCTCCTTTTACAGTATGCTCGGAAATCGATAGACCTTTCAAAG ATAGAAAGAGATTTAGAGTATATTAGTAGTATGCCCCACATGTCAGGAACAAGTGGTGAT GCCGCTATTAGACATTATATTAAAGAGTCGTTCGACAAAAATGGTATAAGGCTAGCTGGG GAAGAGGAGTTCATGGCGTATTCGAATTACCCAGGAAATGTCTCACTTCGTGTATATTCA AAGGATGATACAGAAGGGTTTGATATTCCCTTAAATGAGGAGAACTTTAACCCAATGAGC CATAATGGTCAATTGAACAACATACCGGTGATTTATGCTAATAAAGCATCGTTGGACGAT ATGGCTTCTATGCAAGATCAAGGGCTTTTAAACGGTGACTTTATTTTACTAGTGCATTAC GGAGATTATGTTTTCCAACAAATGTTGACTGCTCAAGAATATGGTGCGAAAGCAATTATC TTTATTTCTGAGCCTTATCAAGACAACAAAGACGTGATACAAATGAAGTCAGTTGCGTTG CCGCAGTATGGTACTGGTGATGCACTTACGCCTGAATGGGAAGGATCAATAAGAGATCCT ATCGATGCTACGGAAGCCAAGTGCCTACCCAAAATTCCATCCATACCGATATCTGCCAAT CAAGGAGATAAAATACTAGCTATATTATCAGACACTGGCGTAAAGTTTTCTAATAATTTA TTCAGTGGGTCGCTTAACGATTGTCGACTTGACCTACTAGTGCAAACAGCAATTAGGGAA CGCCACCCGGTTCACGATATAGTTGGTAAAATTGAAGGATCGGAACAAGCGGGCAGGGCA ATTGTTATTGCTGCACCGAGGAACTCTGCTAGTTATGGCACTATGTATCCTTCTTTTGGA ACCGTCGTTTTGCTGTCTCTGATCCAATTATATCAAGAAATGGTTTACAAATTTGACTGG AAGCCTCTAAGAAATATATATTTCATTTCCTTTGGGGGCTCTGAATTTAATGAAGCGGGA GCCACGGAGCTGATGGAAAAGAGAACAGAGGCATTGAAGAGTGAAATATACACCATTATC GACGTCGGCCAAATCGGTATATGGGATGATAGTAACAATTTAGAGATACAATGTCATCCG CTACTAGTAGATCTTTTTCAAAAAAACATGACAAGCCGTAAATTTAACGTTAAAGTGGAT AATGTTCACCAGTTCGGCGACTGGACGCCGTATCTAGCGCAAGGGATTCCAGTTGCGATC ATTTCATCTCCAGGAGTCATGAATAGAGAACATCCGATCTACACAGTAGAAGACAAATTC GATTTCATCAAAGATAAACTAAGAGACAAAAAGAAGGGAGAGGTACTTTCTGAGATAATG CTATATCTTGTCGAAAAATCACTCGAGCTCATTGACGATCCATTCATCCCATTCAGCATA TCGAACTACGTAGATTTCCTTTCAACTACGTTAAAAGACCTCCAAAAAGAATGTCCTGAT ACGGTAAACTTTGACGAAGTCTTTTTGGGCACAACATTGTGGGAAAACACTAAACTGCAG TTCGAAAAATGGAAAAGCGAATGGACAGAGCTTATGTATGGAGCCGGTACATATATAGAA CCCACTATCATTGCCATTAATCGTTGGTCATGGAACTACCTACTTTCCCTAATAGGCGTT ACCCAATGTTTGGAGGAAGGGTTAATGGATAGAACCTTTTACAAGAACGTTATCTTCGGG CCAAAACTCTGGGTCGACAAAGGTGACCCACTTCGTTCATGGACGTTCCCTGAAATCAGG GACACTATTGCAATCAAGGACTGGAGCTCTGTGCAGGTTCAAGCTAACACACTCGGCACA ATTTTACAAAATACAGCACGCTATTTTCTTGAGAATAAAAACCTTCATGGAATAAACACG AACGAATTTTAG
  • Download Fasta

  • Fasta :-

    MVNTRGYTTLPNVEEPANNSQDELNSQDFEQAIGMPSEPPVYVEEMGMEEPQAPEAFSEK VQRFRMCFENNVVIPVKKNVVDPLAQMISLASEKFDLFLSKIGNVMVMRRIFYIMMMSII AALIIASDRLPNGKARGSNGSFSDHDLLLQYARKSIDLSKIERDLEYISSMPHMSGTSGD AAIRHYIKESFDKNGIRLAGEEEFMAYSNYPGNVSLRVYSKDDTEGFDIPLNEENFNPMS HNGQLNNIPVIYANKASLDDMASMQDQGLLNGDFILLVHYGDYVFQQMLTAQEYGAKAII FISEPYQDNKDVIQMKSVALPQYGTGDALTPEWEGSIRDPIDATEAKCLPKIPSIPISAN QGDKILAILSDTGVKFSNNLFSGSLNDCRLDLLVQTAIRERHPVHDIVGKIEGSEQAGRA IVIAAPRNSASYGTMYPSFGTVVLLSLIQLYQEMVYKFDWKPLRNIYFISFGGSEFNEAG ATELMEKRTEALKSEIYTIIDVGQIGIWDDSNNLEIQCHPLLVDLFQKNMTSRKFNVKVD NVHQFGDWTPYLAQGIPVAIISSPGVMNREHPIYTVEDKFDFIKDKLRDKKKGEVLSEIM LYLVEKSLELIDDPFIPFSISNYVDFLSTTLKDLQKECPDTVNFDEVFLGTTLWENTKLQ FEKWKSEWTELMYGAGTYIEPTIIAINRWSWNYLLSLIGVTQCLEEGLMDRTFYKNVIFG PKLWVDKGDPLRSWTFPEIRDTIAIKDWSSVQVQANTLGTILQNTARYFLENKNLHGINT NEF

  • title: dimer interface
  • coordinates: A417,G418,A420,N465,Y467,E486,K487,T489,A491,L492,K493,S494,P614
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
YPL176C143 SNGSFSDHDL0.995unspYPL176C143 SNGSFSDHDL0.995unspYPL176C143 SNGSFSDHDL0.995unspYPL176C159 SSIDLSKIER0.99unspYPL176C220 SLRVYSKDDT0.998unspYPL176C58 SPEAFSEKVQ0.99unspYPL176C141 SGSNGSFSDH0.995unsp

YPL176C      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India