cgd2_3450 | Ubiquitin carboxyl-terminal hydrolase

UniProt_ID: Q5CTD7

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0036459
Computed_GO_Functions: thiol-dependent ubiquitinyl hydrolase activity
Computed_GO_Process_IDs: GO:0016579
Computed_GO_Processes: protein deubiquitination
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	cgd2_3450	OTHER	0.999965	0.000032	0.000003

No Results

Fasta :-
>cgd2_3450 MGNSVPSSSSSVSSETVNTNRNGAENMSSPIGIKNFGNTCYMNAGLQFISAMGIFTEENF GGIKLNKSSSEEVCRSLISILIQLGKPSRITDAISPYQLFKQLRQQNSDLFNQHQQDAHE FIMYILEIIHDGTIKPCNAPKLSNEDLEKLSKKSTRPGNVFWNNHMMRNNSILNNTICGQ FRSRITCENCGNNSDTFDPFWDITLALPEVSDDYEKISIGSCFRKFFEQQNLFHENDEPN YNCSHCKSVVNATRCINISQFPNVLLVTLKRFNNNGEKCNGIVSFKTAGIILKSLTEIGH FKLVAVLQHNGSTLFQGHYISYVFKKEFNGWFKFDDDIVTLVDDILEEDIQAYCLLYILE SKSALNSNSEQAYSVGIRNQRN
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd2_3450.fa Sequence name : cgd2_3450 Sequence length : 382 VALUES OF COMPUTED PARAMETERS Coef20 : 4.089 CoefTot : 0.259 ChDiff : -5 ZoneTo : 14 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.329 1.265 0.115 0.498 MesoH : -0.458 0.364 -0.367 0.262 MuHd_075 : 7.602 6.008 2.023 2.592 MuHd_095 : 23.657 19.758 7.109 5.134 MuHd_100 : 16.485 14.389 5.372 4.197 MuHd_105 : 4.607 6.009 2.062 2.242 Hmax_075 : 10.325 5.250 0.845 2.651 Hmax_095 : 12.775 10.325 1.871 3.509 Hmax_100 : 12.000 7.600 1.417 2.910 Hmax_105 : 9.100 5.717 1.107 2.998 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8737 0.1263 DFMC : 0.8250 0.1750

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 382 cgd2_3450 MGNSVPSSSSSVSSETVNTNRNGAENMSSPIGIKNFGNTCYMNAGLQFISAMGIFTEENFGGIKLNKSSSEEVCRSLISI 80 LIQLGKPSRITDAISPYQLFKQLRQQNSDLFNQHQQDAHEFIMYILEIIHDGTIKPCNAPKLSNEDLEKLSKKSTRPGNV 160 FWNNHMMRNNSILNNTICGQFRSRITCENCGNNSDTFDPFWDITLALPEVSDDYEKISIGSCFRKFFEQQNLFHENDEPN 240 YNCSHCKSVVNATRCINISQFPNVLLVTLKRFNNNGEKCNGIVSFKTAGIILKSLTEIGHFKLVAVLQHNGSTLFQGHYI 320 SYVFKKEFNGWFKFDDDIVTLVDDILEEDIQAYCLLYILESKSALNSNSEQAYSVGIRNQRN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .............................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd2_3450 21 ETVNTNR|NG 0.074 . cgd2_3450 34 SSPIGIK|NF 0.062 . cgd2_3450 64 ENFGGIK|LN 0.054 . cgd2_3450 67 GGIKLNK|SS 0.092 . cgd2_3450 75 SSEEVCR|SL 0.167 . cgd2_3450 86 ILIQLGK|PS 0.060 . cgd2_3450 89 QLGKPSR|IT 0.104 . cgd2_3450 101 SPYQLFK|QL 0.081 . cgd2_3450 104 QLFKQLR|QQ 0.094 . cgd2_3450 135 IHDGTIK|PC 0.059 . cgd2_3450 141 KPCNAPK|LS 0.067 . cgd2_3450 149 SNEDLEK|LS 0.059 . cgd2_3450 152 DLEKLSK|KS 0.057 . cgd2_3450 153 LEKLSKK|ST 0.208 . cgd2_3450 156 LSKKSTR|PG 0.100 . cgd2_3450 168 WNNHMMR|NN 0.136 . cgd2_3450 182 TICGQFR|SR 0.160 . cgd2_3450 184 CGQFRSR|IT 0.085 . cgd2_3450 216 VSDDYEK|IS 0.055 . cgd2_3450 224 SIGSCFR|KF 0.093 . cgd2_3450 225 IGSCFRK|FF 0.183 . cgd2_3450 247 YNCSHCK|SV 0.128 . cgd2_3450 254 SVVNATR|CI 0.101 . cgd2_3450 270 VLLVTLK|RF 0.056 . cgd2_3450 271 LLVTLKR|FN 0.228 . cgd2_3450 278 FNNNGEK|CN 0.068 . cgd2_3450 286 NGIVSFK|TA 0.092 . cgd2_3450 293 TAGIILK|SL 0.100 . cgd2_3450 302 TEIGHFK|LV 0.086 . cgd2_3450 325 YISYVFK|KE 0.075 . cgd2_3450 326 ISYVFKK|EF 0.135 . cgd2_3450 333 EFNGWFK|FD 0.079 . cgd2_3450 362 LYILESK|SA 0.071 . cgd2_3450 378 AYSVGIR|NQ 0.090 . cgd2_3450 381 VGIRNQR|N- 0.184 . ____________________________^_________________

Fasta :-
>cgd2_3450 AGTAATATGGGGAATTCAGTTCCCTCATCTTCATCGTCAGTATCATCAGAAACAGTTAAT ACGAATAGGAACGGGGCTGAAAATATGAGTAGTCCAATAGGAATAAAGAATTTTGGGAAC ACGTGTTATATGAATGCTGGGTTACAGTTTATATCAGCAATGGGAATCTTTACAGAAGAA AATTTTGGAGGGATAAAACTTAATAAGAGCTCCTCAGAGGAGGTTTGTAGGTCATTAATA TCAATTTTAATTCAGTTAGGAAAACCAAGTAGAATAACAGATGCAATTTCTCCATATCAA CTTTTTAAGCAGCTTAGACAACAGAACTCTGATCTTTTTAACCAGCATCAACAAGATGCA CATGAATTTATTATGTATATTTTGGAAATAATCCATGATGGGACTATTAAACCATGTAAT GCTCCAAAGCTGTCAAACGAAGATCTTGAGAAATTGAGCAAAAAATCAACCCGACCAGGA AATGTTTTTTGGAATAACCATATGATGAGAAATAATTCAATTTTGAATAATACAATATGT GGACAGTTCAGAAGTAGAATAACTTGCGAGAATTGTGGAAATAATAGTGATACTTTTGAT CCCTTTTGGGATATAACATTGGCTCTTCCTGAAGTTTCAGATGATTATGAGAAGATTTCA ATTGGGTCTTGCTTTAGAAAGTTTTTTGAGCAACAGAATCTTTTTCACGAAAATGATGAA CCAAATTACAATTGTTCCCATTGTAAGAGTGTTGTAAACGCAACAAGATGTATAAATATT TCGCAGTTCCCAAATGTATTGCTTGTAACTTTAAAGAGGTTTAATAACAACGGAGAAAAA TGTAATGGGATTGTTTCCTTTAAAACAGCAGGAATAATACTCAAATCTCTCACGGAGATT GGCCACTTCAAGTTAGTAGCAGTGCTTCAACACAATGGAAGTACTCTTTTCCAAGGCCAT TATATCTCCTATGTTTTCAAAAAGGAGTTCAACGGATGGTTTAAATTTGATGATGATATA GTCACTTTAGTAGACGATATTCTTGAGGAGGATATTCAGGCTTACTGCCTTCTTTATATT CTCGAGTCAAAGAGCGCTTTGAACTCCAACTCTGAACAAGCTTATTCTGTGGGTATAAGG AATCAGAGAAATTAG
Download Fasta

Fasta :-

MGNSVPSSSSSVSSETVNTNRNGAENMSSPIGIKNFGNTCYMNAGLQFISAMGIFTEENF GGIKLNKSSSEEVCRSLISILIQLGKPSRITDAISPYQLFKQLRQQNSDLFNQHQQDAHE FIMYILEIIHDGTIKPCNAPKLSNEDLEKLSKKSTRPGNVFWNNHMMRNNSILNNTICGQ FRSRITCENCGNNSDTFDPFWDITLALPEVSDDYEKISIGSCFRKFFEQQNLFHENDEPN YNCSHCKSVVNATRCINISQFPNVLLVTLKRFNNNGEKCNGIVSFKTAGIILKSLTEIGH FKLVAVLQHNGSTLFQGHYISYVFKKEFNGWFKFDDDIVTLVDDILEEDIQAYCLLYILE SKSALNSNSEQAYSVGIRNQRN

Ubiquitin carboxyl-terminal hydrolase, UCH

title: Active Site
coordinates: N35,C40,H318,D336

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	cgd2_3450	S	4	0.608	0.019	cgd2_3450	T	16	0.579	0.059	cgd2_3450	T	19	0.574	0.057	cgd2_3450	S	7	0.507	0.077

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	cgd2_3450	S	4	0.608	0.019	cgd2_3450	T	16	0.579	0.059	cgd2_3450	T	19	0.574	0.057	cgd2_3450	S	7	0.507	0.077

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	cgd2_3450	151 S	LEKLSKKST	0.996	unsp	cgd2_3450	151 S	LEKLSKKST	0.996	unsp	cgd2_3450	151 S	LEKLSKKST	0.996	unsp	cgd2_3450	68 S	KLNKSSSEE	0.995	unsp	cgd2_3450	143 S	APKLSNEDL	0.993	unsp

cgd2_3450 | Ubiquitin carboxyl-terminal hydrolase

ID's

UniProt_ID: Q5CTD7

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0036459

Computed_GO_Functions: thiol-dependent ubiquitinyl hydrolase activity

Computed_GO_Process_IDs: GO:0016579

Computed_GO_Processes: protein deubiquitination

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Ubiquitin carboxyl-terminal hydrolase, UCH

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

cgd2_3450

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India