cgd2_3660 | Subtilase family

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
cgd2_3660SP0.0268390.9712100.001951CS pos: 20-21. VRS-QN. Pr: 0.9500
No Results

  • Fasta :-

    >cgd2_3660 MRAKLLIIQILVTIIITVRSQNLIRIENGAELVSKRQDSNLGTRLTDLIKKIKVNESQYQ DSNRIIFVYKDSNSGSSELFLRLRLRFKNIIERAFNILKFNNTKTRYLKNLSMEIIQTKD NDQMTKFLNVIKDQVSLFQDLIQGVYLDEFIGFEENNYRSTFEIPKINNSIRPTITTENY STIYERQWFHNDSKFGIKSAKMWKRVSELKDQGMGNVVIAVIDSGIDFEHPDLRGKIWRN FGEFDCNDGIDDDMNGYVDDCYGWNFVDNNKIPVDNNGHGTHISGIISAIPNKEVGISGI CWFCQIMVLKVLDSKIRGFLSGFVEAIDYALDKGVRVSNHSYGSRSKSIELLRLAIKRSE DQGMLVIVASGNYESDRNNDIVPTFPSSFKSENIISVTSITSNGELMERATYGRKTVHIG APGVNICSTYLQGEYRCMDGSSFSAPIITGIAGVLLSVFPNISIYSIKDCILKGATRIRG LPG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd2_3660.fa Sequence name : cgd2_3660 Sequence length : 483 VALUES OF COMPUTED PARAMETERS Coef20 : 5.191 CoefTot : 0.589 ChDiff : 4 ZoneTo : 26 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.053 2.076 0.385 0.759 MesoH : -0.049 0.501 -0.149 0.269 MuHd_075 : 27.544 17.059 8.076 6.113 MuHd_095 : 19.021 16.381 4.966 4.762 MuHd_100 : 21.101 15.217 5.352 5.537 MuHd_105 : 23.969 14.451 5.654 5.571 Hmax_075 : 18.300 24.100 4.713 7.320 Hmax_095 : 19.425 20.800 5.353 8.420 Hmax_100 : 17.500 22.600 4.441 6.970 Hmax_105 : 15.100 22.500 3.599 6.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4973 0.5027 DFMC : 0.5144 0.4856
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 483 cgd2_3660 MRAKLLIIQILVTIIITVRSQNLIRIENGAELVSKRQDSNLGTRLTDLIKKIKVNESQYQDSNRIIFVYKDSNSGSSELF 80 LRLRLRFKNIIERAFNILKFNNTKTRYLKNLSMEIIQTKDNDQMTKFLNVIKDQVSLFQDLIQGVYLDEFIGFEENNYRS 160 TFEIPKINNSIRPTITTENYSTIYERQWFHNDSKFGIKSAKMWKRVSELKDQGMGNVVIAVIDSGIDFEHPDLRGKIWRN 240 FGEFDCNDGIDDDMNGYVDDCYGWNFVDNNKIPVDNNGHGTHISGIISAIPNKEVGISGICWFCQIMVLKVLDSKIRGFL 320 SGFVEAIDYALDKGVRVSNHSYGSRSKSIELLRLAIKRSEDQGMLVIVASGNYESDRNNDIVPTFPSSFKSENIISVTSI 400 TSNGELMERATYGRKTVHIGAPGVNICSTYLQGEYRCMDGSSFSAPIITGIAGVLLSVFPNISIYSIKDCILKGATRIRG 480 LPG 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd2_3660 2 -----MR|AK 0.085 . cgd2_3660 4 ---MRAK|LL 0.070 . cgd2_3660 19 TIIITVR|SQ 0.098 . cgd2_3660 25 RSQNLIR|IE 0.097 . cgd2_3660 35 GAELVSK|RQ 0.068 . cgd2_3660 36 AELVSKR|QD 0.178 . cgd2_3660 44 DSNLGTR|LT 0.084 . cgd2_3660 50 RLTDLIK|KI 0.064 . cgd2_3660 51 LTDLIKK|IK 0.068 . cgd2_3660 53 DLIKKIK|VN 0.067 . cgd2_3660 64 QYQDSNR|II 0.111 . cgd2_3660 70 RIIFVYK|DS 0.079 . cgd2_3660 82 SSELFLR|LR 0.070 . cgd2_3660 84 ELFLRLR|LR 0.070 . cgd2_3660 86 FLRLRLR|FK 0.129 . cgd2_3660 88 RLRLRFK|NI 0.066 . cgd2_3660 93 FKNIIER|AF 0.085 . cgd2_3660 99 RAFNILK|FN 0.066 . cgd2_3660 104 LKFNNTK|TR 0.059 . cgd2_3660 106 FNNTKTR|YL 0.108 . cgd2_3660 109 TKTRYLK|NL 0.156 . cgd2_3660 119 MEIIQTK|DN 0.087 . cgd2_3660 126 DNDQMTK|FL 0.078 . cgd2_3660 132 KFLNVIK|DQ 0.061 . cgd2_3660 159 FEENNYR|ST 0.132 . cgd2_3660 166 STFEIPK|IN 0.068 . cgd2_3660 172 KINNSIR|PT 0.145 . cgd2_3660 186 YSTIYER|QW 0.092 . cgd2_3660 194 WFHNDSK|FG 0.070 . cgd2_3660 198 DSKFGIK|SA 0.082 . cgd2_3660 201 FGIKSAK|MW 0.071 . cgd2_3660 204 KSAKMWK|RV 0.095 . cgd2_3660 205 SAKMWKR|VS 0.221 . cgd2_3660 210 KRVSELK|DQ 0.086 . cgd2_3660 234 FEHPDLR|GK 0.092 . cgd2_3660 236 HPDLRGK|IW 0.061 . cgd2_3660 239 LRGKIWR|NF 0.135 . cgd2_3660 271 NFVDNNK|IP 0.055 . cgd2_3660 293 ISAIPNK|EV 0.117 . cgd2_3660 310 CQIMVLK|VL 0.074 . cgd2_3660 315 LKVLDSK|IR 0.057 . cgd2_3660 317 VLDSKIR|GF 0.087 . cgd2_3660 333 IDYALDK|GV 0.094 . cgd2_3660 336 ALDKGVR|VS 0.070 . cgd2_3660 345 NHSYGSR|SK 0.161 . cgd2_3660 347 SYGSRSK|SI 0.085 . cgd2_3660 353 KSIELLR|LA 0.081 . cgd2_3660 357 LLRLAIK|RS 0.072 . cgd2_3660 358 LRLAIKR|SE 0.405 . cgd2_3660 377 GNYESDR|NN 0.114 . cgd2_3660 390 TFPSSFK|SE 0.075 . cgd2_3660 409 NGELMER|AT 0.076 . cgd2_3660 414 ERATYGR|KT 0.102 . cgd2_3660 415 RATYGRK|TV 0.106 . cgd2_3660 436 YLQGEYR|CM 0.103 . cgd2_3660 468 ISIYSIK|DC 0.083 . cgd2_3660 473 IKDCILK|GA 0.071 . cgd2_3660 477 ILKGATR|IR 0.074 . cgd2_3660 479 KGATRIR|GL 0.112 . ____________________________^_________________

  • Fasta :-

    >cgd2_3660 ATGAGGGCAAAACTACTGATAATTCAAATCCTGGTAACTATTATAATAACAGTTAGGTCT CAGAACTTGATTAGAATAGAAAATGGAGCTGAATTAGTTTCTAAAAGGCAGGATTCTAAT CTTGGTACTAGGTTAACGGATTTGATAAAAAAGATTAAAGTTAATGAATCACAATATCAA GACTCGAATAGAATAATATTTGTATATAAAGATAGTAATAGTGGCTCAAGTGAGTTATTT TTAAGATTAAGATTGAGGTTTAAAAACATTATTGAAAGAGCTTTTAATATACTCAAGTTT AACAATACAAAAACAAGGTATTTAAAGAATTTAAGCATGGAGATTATACAAACTAAAGAT AATGATCAGATGACAAAATTCCTGAATGTAATAAAGGATCAAGTCAGCTTGTTTCAAGAT TTGATTCAGGGAGTGTATTTGGACGAGTTTATTGGATTCGAAGAAAACAATTACAGAAGT ACATTTGAGATACCAAAAATAAATAACTCCATCAGGCCAACAATAACTACTGAAAACTAT TCAACTATTTATGAAAGACAATGGTTTCATAATGATTCAAAATTTGGGATAAAGTCAGCA AAAATGTGGAAAAGAGTTTCAGAACTTAAGGATCAAGGAATGGGAAATGTTGTAATTGCA GTTATTGACTCTGGGATTGATTTTGAGCATCCTGATTTGAGAGGAAAAATATGGAGGAAT TTTGGAGAGTTTGACTGTAATGATGGAATTGATGATGATATGAATGGTTATGTTGATGAT TGTTATGGATGGAATTTTGTGGATAATAATAAAATACCAGTAGATAATAATGGACATGGA ACTCATATTTCTGGCATCATTTCTGCAATCCCAAATAAGGAAGTTGGTATTTCAGGAATT TGTTGGTTTTGCCAAATCATGGTATTAAAGGTTTTGGACTCAAAAATTAGAGGATTCCTA TCAGGATTTGTCGAAGCTATTGACTATGCATTAGATAAAGGAGTAAGAGTATCAAATCAT AGCTATGGAAGTAGAAGTAAAAGCATTGAATTATTAAGACTTGCAATTAAAAGAAGTGAA GATCAAGGAATGTTGGTAATTGTAGCTTCTGGTAATTATGAAAGCGATAGAAATAATGAT ATTGTTCCAACTTTCCCTTCATCTTTCAAGTCTGAAAACATTATTTCTGTGACTTCGATT ACAAGTAATGGAGAACTAATGGAAAGAGCAACTTATGGAAGAAAGACCGTCCATATTGGA GCTCCTGGAGTTAATATTTGCTCTACATATCTACAGGGAGAATATAGATGTATGGATGGT AGCTCATTCTCTGCCCCAATTATAACTGGGATAGCTGGGGTCTTGCTTTCAGTCTTCCCA AATATCTCAATATATTCTATTAAAGATTGTATTTTAAAAGGAGCTACCCGAATTAGAGGT CTTCCTGGTAA
  • Download Fasta

  • Fasta :-

    MRAKLLIIQILVTIIITVRSQNLIRIENGAELVSKRQDSNLGTRLTDLIKKIKVNESQYQ DSNRIIFVYKDSNSGSSELFLRLRLRFKNIIERAFNILKFNNTKTRYLKNLSMEIIQTKD NDQMTKFLNVIKDQVSLFQDLIQGVYLDEFIGFEENNYRSTFEIPKINNSIRPTITTENY STIYERQWFHNDSKFGIKSAKMWKRVSELKDQGMGNVVIAVIDSGIDFEHPDLRGKIWRN FGEFDCNDGIDDDMNGYVDDCYGWNFVDNNKIPVDNNGHGTHISGIISAIPNKEVGISGI CWFCQIMVLKVLDSKIRGFLSGFVEAIDYALDKGVRVSNHSYGSRSKSIELLRLAIKRSE DQGMLVIVASGNYESDRNNDIVPTFPSSFKSENIISVTSITSNGELMERATYGRKTVHIG APGVNICSTYLQGEYRCMDGSSFSAPIITGIAGVLLSVFPNISIYSIKDCILKGATRIRG LPG

    No Results
  • title: catalytic triad
  • coordinates: D223,H279,S442
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd2_366039 SKRQDSNLGT0.993unspcgd2_3660348 SSRSKSIELL0.996unsp

cgd2_3660      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India