• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
cgd2_920OTHER0.9998800.0001030.000016
No Results
  • Fasta :-

    >cgd2_920 MINNSQELVQKVDDIVLPECEDRKYRALELKNGLTAFLVSDKETKTSGCCLTVYIGAMYS PKNLNGLAHFLEHMLFCGTKKYPNVDEYQKFIASHGGKRHGSTTRSTTTYYFEIKNNAFN EALDRFSSFFTEPLFCKDMTEKEVSAIENEFHLKYHSDERVRFHLLGQLSNKSHPLNCFT TGNKETLEFKPKKLGINLHSELLKFYSSYYSSNIMSIILYGKEDLDTLEKYTIEYFSKIP NHQVNCFDYTKIFMEIPPYTRETSIGKIIKLIPYETDKRLKIYFPLPPLDKYNDSCAPAY IANIIGHKGEGGISSILRAKKLATGASFAITNEDPCALAQFGVVLTDEGYNNIGQVLEII FNFLVLFKATPVIPELVDEFIGITRAGFTYQPKFSIRDLFSLPAKYLKYKCKFEEILSSG FVVKKFSQDDVFSILEYLSNDNFFILLSSQAIEEEYKKNQENFIVEHYYGTKYSISELDE DLLSIINSSSPEKALKLGLILPKPNQFVSTDFSILNPQKVCVNDYLRIPELLNFDELKAQ GNTDSYNIHSHPLNIWFKPDSTFNSPHSLINMRLVAERILEFKENSSFEKLSNFSNELVF QVFGEILNEVMYRSMHELSSDILAASLSYTINFNSRTNVFVLQGFGLSHKLNYLISIMFE KLYHGTEVRKYYDEAILIISKDWKNKIIKPNLTSLSLECISESLSPFFFNRQEKLNVLES FTFELFCSIRQHFLSNCRLEGLIMGNFSEPNAKCISIQHWKNLINFQNSVKNEVKSCGIK VEQFSIVNLKKDIYTLNYIPNSSDKNGCWMLSFFLGEYNLRKQVLCDLILPFVSSEAFAD LRTNQQLAYVVRATQIFSSPAIIIGYYLQSSEYTNALTLERLLEFHINKTKVELKSKLNK EMFIKLKDSTIQTLSSNPKSIFDEYKTYLHEINERSYLFDIRQRKIDILNNVQYNEFIEF YDSIWTSNSVLTEIRSQIDDTKNSGVGSEYKDPSIPEGYLKLESITQISRNKNTPMISLE DKLKNL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd2_920.fa Sequence name : cgd2_920 Sequence length : 1026 VALUES OF COMPUTED PARAMETERS Coef20 : 3.341 CoefTot : -0.311 ChDiff : -10 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.924 1.782 0.141 0.645 MesoH : -0.193 0.675 -0.250 0.354 MuHd_075 : 9.449 11.490 1.802 2.824 MuHd_095 : 36.216 27.875 10.832 6.877 MuHd_100 : 41.336 31.342 12.506 7.929 MuHd_105 : 40.665 29.928 12.481 7.904 Hmax_075 : 0.900 13.500 -0.771 4.280 Hmax_095 : 10.300 16.188 1.287 4.690 Hmax_100 : 17.700 22.000 3.774 6.260 Hmax_105 : 18.200 24.600 4.650 7.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8879 0.1121 DFMC : 0.9633 0.0367
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1026 cgd2_920 MINNSQELVQKVDDIVLPECEDRKYRALELKNGLTAFLVSDKETKTSGCCLTVYIGAMYSPKNLNGLAHFLEHMLFCGTK 80 KYPNVDEYQKFIASHGGKRHGSTTRSTTTYYFEIKNNAFNEALDRFSSFFTEPLFCKDMTEKEVSAIENEFHLKYHSDER 160 VRFHLLGQLSNKSHPLNCFTTGNKETLEFKPKKLGINLHSELLKFYSSYYSSNIMSIILYGKEDLDTLEKYTIEYFSKIP 240 NHQVNCFDYTKIFMEIPPYTRETSIGKIIKLIPYETDKRLKIYFPLPPLDKYNDSCAPAYIANIIGHKGEGGISSILRAK 320 KLATGASFAITNEDPCALAQFGVVLTDEGYNNIGQVLEIIFNFLVLFKATPVIPELVDEFIGITRAGFTYQPKFSIRDLF 400 SLPAKYLKYKCKFEEILSSGFVVKKFSQDDVFSILEYLSNDNFFILLSSQAIEEEYKKNQENFIVEHYYGTKYSISELDE 480 DLLSIINSSSPEKALKLGLILPKPNQFVSTDFSILNPQKVCVNDYLRIPELLNFDELKAQGNTDSYNIHSHPLNIWFKPD 560 STFNSPHSLINMRLVAERILEFKENSSFEKLSNFSNELVFQVFGEILNEVMYRSMHELSSDILAASLSYTINFNSRTNVF 640 VLQGFGLSHKLNYLISIMFEKLYHGTEVRKYYDEAILIISKDWKNKIIKPNLTSLSLECISESLSPFFFNRQEKLNVLES 720 FTFELFCSIRQHFLSNCRLEGLIMGNFSEPNAKCISIQHWKNLINFQNSVKNEVKSCGIKVEQFSIVNLKKDIYTLNYIP 800 NSSDKNGCWMLSFFLGEYNLRKQVLCDLILPFVSSEAFADLRTNQQLAYVVRATQIFSSPAIIIGYYLQSSEYTNALTLE 880 RLLEFHINKTKVELKSKLNKEMFIKLKDSTIQTLSSNPKSIFDEYKTYLHEINERSYLFDIRQRKIDILNNVQYNEFIEF 960 YDSIWTSNSVLTEIRSQIDDTKNSGVGSEYKDPSIPEGYLKLESITQISRNKNTPMISLEDKLKNL 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 .................................................................. 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd2_920 11 SQELVQK|VD 0.069 . cgd2_920 23 LPECEDR|KY 0.089 . cgd2_920 24 PECEDRK|YR 0.072 . cgd2_920 26 CEDRKYR|AL 0.280 . cgd2_920 31 YRALELK|NG 0.064 . cgd2_920 42 AFLVSDK|ET 0.063 . cgd2_920 45 VSDKETK|TS 0.068 . cgd2_920 62 GAMYSPK|NL 0.069 . cgd2_920 80 MLFCGTK|KY 0.061 . cgd2_920 81 LFCGTKK|YP 0.101 . cgd2_920 90 NVDEYQK|FI 0.061 . cgd2_920 98 IASHGGK|RH 0.073 . cgd2_920 99 ASHGGKR|HG 0.213 . cgd2_920 105 RHGSTTR|ST 0.168 . cgd2_920 115 TYYFEIK|NN 0.061 . cgd2_920 125 FNEALDR|FS 0.085 . cgd2_920 137 TEPLFCK|DM 0.078 . cgd2_920 142 CKDMTEK|EV 0.101 . cgd2_920 154 ENEFHLK|YH 0.080 . cgd2_920 160 KYHSDER|VR 0.083 . cgd2_920 162 HSDERVR|FH 0.083 . cgd2_920 172 LGQLSNK|SH 0.070 . cgd2_920 184 CFTTGNK|ET 0.051 . cgd2_920 190 KETLEFK|PK 0.059 . cgd2_920 192 TLEFKPK|KL 0.100 . cgd2_920 193 LEFKPKK|LG 0.083 . cgd2_920 204 LHSELLK|FY 0.083 . cgd2_920 222 SIILYGK|ED 0.057 . cgd2_920 230 DLDTLEK|YT 0.061 . cgd2_920 238 TIEYFSK|IP 0.069 . cgd2_920 251 NCFDYTK|IF 0.061 . cgd2_920 261 EIPPYTR|ET 0.079 . cgd2_920 267 RETSIGK|II 0.058 . cgd2_920 270 SIGKIIK|LI 0.062 . cgd2_920 278 IPYETDK|RL 0.062 . cgd2_920 279 PYETDKR|LK 0.085 . cgd2_920 281 ETDKRLK|IY 0.062 . cgd2_920 291 PLPPLDK|YN 0.061 . cgd2_920 308 ANIIGHK|GE 0.064 . cgd2_920 318 GISSILR|AK 0.099 . cgd2_920 320 SSILRAK|KL 0.070 . cgd2_920 321 SILRAKK|LA 0.288 . cgd2_920 368 NFLVLFK|AT 0.060 . cgd2_920 385 EFIGITR|AG 0.081 . cgd2_920 393 GFTYQPK|FS 0.069 . cgd2_920 397 QPKFSIR|DL 0.123 . cgd2_920 405 LFSLPAK|YL 0.075 . cgd2_920 408 LPAKYLK|YK 0.079 . cgd2_920 410 AKYLKYK|CK 0.076 . cgd2_920 412 YLKYKCK|FE 0.081 . cgd2_920 424 SSGFVVK|KF 0.075 . cgd2_920 425 SGFVVKK|FS 0.126 . cgd2_920 457 AIEEEYK|KN 0.059 . cgd2_920 458 IEEEYKK|NQ 0.083 . cgd2_920 472 EHYYGTK|YS 0.066 . cgd2_920 493 NSSSPEK|AL 0.071 . cgd2_920 496 SPEKALK|LG 0.056 . cgd2_920 503 LGLILPK|PN 0.062 . cgd2_920 519 SILNPQK|VC 0.053 . cgd2_920 527 CVNDYLR|IP 0.070 . cgd2_920 538 LNFDELK|AQ 0.066 . cgd2_920 558 PLNIWFK|PD 0.070 . cgd2_920 573 HSLINMR|LV 0.099 . cgd2_920 578 MRLVAER|IL 0.129 . cgd2_920 583 ERILEFK|EN 0.070 . cgd2_920 590 ENSSFEK|LS 0.066 . cgd2_920 613 LNEVMYR|SM 0.132 . cgd2_920 636 TINFNSR|TN 0.101 . cgd2_920 650 GFGLSHK|LN 0.059 . cgd2_920 661 ISIMFEK|LY 0.069 . cgd2_920 669 YHGTEVR|KY 0.081 . cgd2_920 670 HGTEVRK|YY 0.095 . cgd2_920 681 AILIISK|DW 0.058 . cgd2_920 684 IISKDWK|NK 0.072 . cgd2_920 686 SKDWKNK|II 0.084 . cgd2_920 689 WKNKIIK|PN 0.072 . cgd2_920 711 SPFFFNR|QE 0.086 . cgd2_920 714 FFNRQEK|LN 0.110 . cgd2_920 730 ELFCSIR|QH 0.076 . cgd2_920 738 HFLSNCR|LE 0.073 . cgd2_920 753 FSEPNAK|CI 0.074 . cgd2_920 761 ISIQHWK|NL 0.071 . cgd2_920 771 NFQNSVK|NE 0.056 . cgd2_920 775 SVKNEVK|SC 0.105 . cgd2_920 780 VKSCGIK|VE 0.059 . cgd2_920 790 FSIVNLK|KD 0.060 . cgd2_920 791 SIVNLKK|DI 0.126 . cgd2_920 805 IPNSSDK|NG 0.073 . cgd2_920 821 LGEYNLR|KQ 0.063 . cgd2_920 822 GEYNLRK|QV 0.093 . cgd2_920 842 EAFADLR|TN 0.071 . cgd2_920 852 QLAYVVR|AT 0.092 . cgd2_920 881 NALTLER|LL 0.075 . cgd2_920 889 LEFHINK|TK 0.054 . cgd2_920 891 FHINKTK|VE 0.056 . cgd2_920 895 KTKVELK|SK 0.081 . cgd2_920 897 KVELKSK|LN 0.059 . cgd2_920 900 LKSKLNK|EM 0.082 . cgd2_920 905 NKEMFIK|LK 0.065 . cgd2_920 907 EMFIKLK|DS 0.076 . cgd2_920 919 TLSSNPK|SI 0.140 . cgd2_920 926 SIFDEYK|TY 0.067 . cgd2_920 935 LHEINER|SY 0.098 . cgd2_920 942 SYLFDIR|QR 0.070 . cgd2_920 944 LFDIRQR|KI 0.082 . cgd2_920 945 FDIRQRK|ID 0.153 . cgd2_920 975 SVLTEIR|SQ 0.100 . cgd2_920 982 SQIDDTK|NS 0.069 . cgd2_920 991 GVGSEYK|DP 0.074 . cgd2_920 1001 IPEGYLK|LE 0.064 . cgd2_920 1010 SITQISR|NK 0.068 . cgd2_920 1012 TQISRNK|NT 0.058 . cgd2_920 1022 MISLEDK|LK 0.066 . cgd2_920 1024 SLEDKLK|NL 0.069 . ____________________________^_________________
  • Fasta :-

    >cgd2_920 GAGAAAATGATTAATAATTCACAGGAACTGGTTCAAAAAGTGGATGACATTGTACTTCCA GAATGTGAAGATAGAAAGTACAGAGCTTTAGAGCTTAAGAACGGTCTAACAGCCTTTTTA GTATCAGATAAGGAAACTAAAACAAGTGGATGCTGCCTTACAGTCTACATTGGAGCTATG TACTCTCCTAAAAATTTAAATGGATTGGCACACTTTTTAGAGCATATGTTATTCTGTGGA ACAAAAAAATATCCGAACGTGGATGAATATCAAAAATTTATTGCAAGCCATGGAGGAAAG AGGCATGGATCTACTACAAGATCAACTACAACATATTACTTTGAAATAAAAAATAATGCT TTTAATGAAGCATTGGATAGATTTTCTTCATTCTTTACAGAACCATTGTTTTGCAAGGAT ATGACAGAAAAAGAGGTTTCTGCCATTGAAAATGAGTTCCATCTTAAATATCACAGTGAT GAAAGAGTTAGATTCCATTTACTTGGTCAATTGTCAAACAAATCACATCCTTTGAATTGT TTTACTACCGGGAATAAAGAAACTTTGGAATTCAAACCCAAAAAATTGGGAATCAATCTC CATTCTGAACTTTTAAAGTTCTACTCTTCCTATTACAGCAGTAATATTATGTCAATTATT CTTTATGGAAAAGAAGATCTAGACACATTGGAAAAGTATACTATTGAATATTTTTCAAAA ATTCCAAATCACCAAGTTAATTGTTTTGATTATACAAAGATTTTCATGGAAATTCCTCCT TATACAAGAGAAACTTCAATTGGAAAAATTATTAAGTTAATACCTTATGAAACTGACAAA AGATTAAAAATCTACTTCCCACTTCCTCCTTTAGACAAATATAACGATAGTTGTGCTCCT GCTTATATTGCAAACATTATTGGACATAAAGGTGAAGGAGGAATATCATCAATATTAAGA GCTAAAAAACTTGCTACTGGTGCTTCTTTTGCTATTACTAATGAAGATCCATGTGCACTA GCTCAGTTTGGGGTTGTTCTAACTGATGAGGGGTATAATAATATTGGACAAGTATTGGAA ATCATTTTCAACTTTTTAGTATTATTTAAGGCAACACCTGTTATTCCAGAACTAGTTGAT GAGTTTATTGGGATTACTAGAGCAGGTTTTACTTATCAACCCAAATTCTCAATTCGTGAC TTATTCTCATTACCAGCAAAGTATCTCAAATACAAATGTAAATTTGAAGAAATCCTCTCT TCCGGTTTTGTTGTGAAAAAATTTTCACAAGATGATGTATTCTCTATTTTGGAATACTTA AGTAATGACAATTTTTTTATCTTACTATCTTCGCAAGCAATTGAGGAGGAGTATAAGAAA AATCAAGAAAACTTTATTGTTGAACATTATTATGGAACAAAATATAGTATTTCAGAACTA GATGAAGATTTGCTTTCAATAATTAATTCCTCCTCACCAGAAAAGGCTTTAAAACTTGGG TTAATTTTGCCAAAGCCGAATCAATTTGTATCAACAGATTTCTCAATATTAAACCCACAA AAGGTTTGTGTTAATGATTACTTGAGAATTCCTGAGCTTCTAAATTTTGATGAATTGAAA GCTCAAGGTAATACCGATTCTTACAATATTCATTCACATCCTTTAAATATTTGGTTTAAA CCAGATTCAACCTTTAATTCTCCTCATTCATTAATCAATATGAGATTAGTTGCTGAGAGA ATTCTAGAATTTAAAGAAAACTCATCTTTTGAGAAATTGTCAAATTTTTCAAATGAATTA GTTTTCCAAGTATTTGGTGAAATCTTAAATGAAGTTATGTATAGAAGTATGCATGAGCTT TCTTCAGATATATTAGCAGCAAGTTTATCTTATACAATTAATTTCAATTCTAGAACAAAT GTATTTGTTTTACAAGGATTTGGACTTTCTCACAAATTAAATTATTTGATTTCAATAATG TTCGAGAAATTATATCATGGAACAGAGGTTAGAAAATATTATGATGAAGCCATATTAATT ATAAGCAAAGATTGGAAGAATAAGATAATAAAACCAAATTTGACTTCACTTTCACTAGAA TGTATCTCAGAATCTTTGTCACCTTTTTTCTTCAATCGTCAAGAAAAATTAAATGTTTTG GAATCATTTACTTTTGAATTGTTTTGTTCTATAAGACAACACTTTTTATCAAACTGTAGA CTTGAAGGGTTAATTATGGGTAATTTTTCAGAACCAAATGCAAAGTGTATTTCAATACAA CATTGGAAAAATTTGATAAATTTCCAGAATTCTGTTAAAAATGAAGTAAAATCTTGTGGA ATAAAAGTAGAACAATTTTCAATTGTTAATTTAAAAAAGGATATTTATACTTTAAATTAT ATTCCAAATAGTTCGGACAAAAATGGATGTTGGATGTTGAGTTTCTTCCTTGGAGAGTAT AATTTGAGGAAACAAGTCCTATGTGATTTGATTTTACCGTTTGTCTCAAGTGAAGCTTTT GCTGATCTCAGAACTAATCAACAACTAGCTTATGTTGTTAGAGCTACACAGATATTTTCT TCTCCTGCAATTATTATTGGATACTATTTACAATCATCTGAGTATACTAATGCTCTAACT CTTGAGAGGCTTTTAGAGTTTCATATAAACAAAACAAAAGTGGAACTAAAAAGTAAATTG AATAAGGAAATGTTTATAAAATTGAAGGATTCCACAATTCAAACCCTTTCATCAAATCCA AAAAGTATCTTTGATGAGTATAAGACTTATCTTCATGAGATTAATGAAAGATCATATTTA TTTGATATAAGACAAAGGAAAATAGATATATTAAATAATGTACAATACAATGAATTTATT GAATTTTATGATAGTATATGGACTTCAAACTCCGTATTAACAGAAATAAGATCTCAAATA GATGATACTAAGAATTCTGGTGTGGGTTCTGAATATAAAGATCCATCTATTCCAGAAGGA TATTTAAAATTGGAGTCAATTACTCAGATTTCAAGGAACAAAAATACACCCATGATTTCG CTGGAAGATAAACTAAAGAATTTGTAA
  • Download Fasta
  • Fasta :-

    MINNSQELVQKVDDIVLPECEDRKYRALELKNGLTAFLVSDKETKTSGCCLTVYIGAMYS PKNLNGLAHFLEHMLFCGTKKYPNVDEYQKFIASHGGKRHGSTTRSTTTYYFEIKNNAFN EALDRFSSFFTEPLFCKDMTEKEVSAIENEFHLKYHSDERVRFHLLGQLSNKSHPLNCFT TGNKETLEFKPKKLGINLHSELLKFYSSYYSSNIMSIILYGKEDLDTLEKYTIEYFSKIP NHQVNCFDYTKIFMEIPPYTRETSIGKIIKLIPYETDKRLKIYFPLPPLDKYNDSCAPAY IANIIGHKGEGGISSILRAKKLATGASFAITNEDPCALAQFGVVLTDEGYNNIGQVLEII FNFLVLFKATPVIPELVDEFIGITRAGFTYQPKFSIRDLFSLPAKYLKYKCKFEEILSSG FVVKKFSQDDVFSILEYLSNDNFFILLSSQAIEEEYKKNQENFIVEHYYGTKYSISELDE DLLSIINSSSPEKALKLGLILPKPNQFVSTDFSILNPQKVCVNDYLRIPELLNFDELKAQ GNTDSYNIHSHPLNIWFKPDSTFNSPHSLINMRLVAERILEFKENSSFEKLSNFSNELVF QVFGEILNEVMYRSMHELSSDILAASLSYTINFNSRTNVFVLQGFGLSHKLNYLISIMFE KLYHGTEVRKYYDEAILIISKDWKNKIIKPNLTSLSLECISESLSPFFFNRQEKLNVLES FTFELFCSIRQHFLSNCRLEGLIMGNFSEPNAKCISIQHWKNLINFQNSVKNEVKSCGIK VEQFSIVNLKKDIYTLNYIPNSSDKNGCWMLSFFLGEYNLRKQVLCDLILPFVSSEAFAD LRTNQQLAYVVRATQIFSSPAIIIGYYLQSSEYTNALTLERLLEFHINKTKVELKSKLNK EMFIKLKDSTIQTLSSNPKSIFDEYKTYLHEINERSYLFDIRQRKIDILNNVQYNEFIEF YDSIWTSNSVLTEIRSQIDDTKNSGVGSEYKDPSIPEGYLKLESITQISRNKNTPMISLE DKLKNL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd2_920145 SEKEVSAIEN0.996unspcgd2_920145 SEKEVSAIEN0.996unspcgd2_920145 SEKEVSAIEN0.996unspcgd2_920395 SQPKFSIRDL0.996unspcgd2_920490 SINSSSPEKA0.993unspcgd2_920769 SNFQNSVKNE0.995unspcgd2_920920 SSNPKSIFDE0.993unspcgd2_92040 SAFLVSDKET0.997unspcgd2_920102 SKRHGSTTRS0.991unsp

cgd2_920      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India