cgd3_730 | Alpha/Beta hydrolase fold containing protein

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_IDPredictionOTHERSPmTPCS_Position
cgd3_730OTHER0.9996800.0000940.000226
No Results

  • Fasta :-

    >cgd3_730 MDLKLEFLNKTENRTTGCSVQCIFGKIILLIVSIILLLGLLVWIFQEKLLFFPNINGKRD LASNFPGYRHPNENKMNSEDVVLTTDDNVKLYCWFIIHKKFDRYSHGQSSAMHFSSNLTE PHHSEQVKKDGPEKKILDRIRKAPKYMKFHFPEFSDRYEQQEKAPTIVFFHGNAGNIGHR LPRFLEFYNLIGVNIFAVSYRGYGDSEGTPSEEGFYLDAKASLEYVLSRTDVVDKNMIFL YGHSIGGAVAIDLASKYNVTGVILENTFTNIKSVAFRVYPIFKYFGFFFKFIQRLKFDSV SKISRVKSPILFVVGNEDEIIPPTHSVELYMKAGSPKSLKKIYLVSGGSHNDTWIKGGME FYLMLLQFIYNAIDYSKPELEVSSNNLINKSQEETLSSIQEILKTKESSPINKLRKKTN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd3_730.fa Sequence name : cgd3_730 Sequence length : 419 VALUES OF COMPUTED PARAMETERS Coef20 : 3.895 CoefTot : 0.000 ChDiff : 8 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.612 3.259 0.578 1.059 MesoH : -0.284 0.632 -0.320 0.299 MuHd_075 : 14.347 7.347 3.632 4.840 MuHd_095 : 27.677 13.519 6.728 4.084 MuHd_100 : 25.602 14.730 7.275 3.514 MuHd_105 : 19.976 13.698 6.724 2.773 Hmax_075 : -0.700 5.500 -0.791 2.650 Hmax_095 : 4.900 7.600 0.317 2.090 Hmax_100 : 5.500 5.700 -0.170 1.630 Hmax_105 : -5.950 1.900 -2.554 0.370 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9854 0.0146 DFMC : 0.9888 0.0112
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 419 cgd3_730 MDLKLEFLNKTENRTTGCSVQCIFGKIILLIVSIILLLGLLVWIFQEKLLFFPNINGKRDLASNFPGYRHPNENKMNSED 80 VVLTTDDNVKLYCWFIIHKKFDRYSHGQSSAMHFSSNLTEPHHSEQVKKDGPEKKILDRIRKAPKYMKFHFPEFSDRYEQ 160 QEKAPTIVFFHGNAGNIGHRLPRFLEFYNLIGVNIFAVSYRGYGDSEGTPSEEGFYLDAKASLEYVLSRTDVVDKNMIFL 240 YGHSIGGAVAIDLASKYNVTGVILENTFTNIKSVAFRVYPIFKYFGFFFKFIQRLKFDSVSKISRVKSPILFVVGNEDEI 320 IPPTHSVELYMKAGSPKSLKKIYLVSGGSHNDTWIKGGMEFYLMLLQFIYNAIDYSKPELEVSSNNLINKSQEETLSSIQ 400 EILKTKESSPINKLRKKTN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd3_730 4 ---MDLK|LE 0.052 . cgd3_730 10 KLEFLNK|TE 0.058 . cgd3_730 14 LNKTENR|TT 0.125 . cgd3_730 26 VQCIFGK|II 0.066 . cgd3_730 48 VWIFQEK|LL 0.059 . cgd3_730 58 FPNINGK|RD 0.061 . cgd3_730 59 PNINGKR|DL 0.202 . cgd3_730 69 SNFPGYR|HP 0.077 . cgd3_730 75 RHPNENK|MN 0.065 . cgd3_730 90 TTDDNVK|LY 0.061 . cgd3_730 99 CWFIIHK|KF 0.060 . cgd3_730 100 WFIIHKK|FD 0.103 . cgd3_730 103 IHKKFDR|YS 0.148 . cgd3_730 128 HHSEQVK|KD 0.090 . cgd3_730 129 HSEQVKK|DG 0.116 . cgd3_730 134 KKDGPEK|KI 0.061 . cgd3_730 135 KDGPEKK|IL 0.164 . cgd3_730 139 EKKILDR|IR 0.073 . cgd3_730 141 KILDRIR|KA 0.102 . cgd3_730 142 ILDRIRK|AP 0.170 . cgd3_730 145 RIRKAPK|YM 0.072 . cgd3_730 148 KAPKYMK|FH 0.069 . cgd3_730 157 FPEFSDR|YE 0.094 . cgd3_730 163 RYEQQEK|AP 0.065 . cgd3_730 180 AGNIGHR|LP 0.073 . cgd3_730 183 IGHRLPR|FL 0.357 . cgd3_730 201 IFAVSYR|GY 0.256 . cgd3_730 220 GFYLDAK|AS 0.060 . cgd3_730 229 LEYVLSR|TD 0.080 . cgd3_730 235 RTDVVDK|NM 0.058 . cgd3_730 256 AIDLASK|YN 0.061 . cgd3_730 272 NTFTNIK|SV 0.068 . cgd3_730 277 IKSVAFR|VY 0.093 . cgd3_730 283 RVYPIFK|YF 0.073 . cgd3_730 290 YFGFFFK|FI 0.071 . cgd3_730 294 FFKFIQR|LK 0.077 . cgd3_730 296 KFIQRLK|FD 0.065 . cgd3_730 302 KFDSVSK|IS 0.058 . cgd3_730 305 SVSKISR|VK 0.130 . cgd3_730 307 SKISRVK|SP 0.069 . cgd3_730 332 SVELYMK|AG 0.062 . cgd3_730 337 MKAGSPK|SL 0.122 . cgd3_730 340 GSPKSLK|KI 0.064 . cgd3_730 341 SPKSLKK|IY 0.118 . cgd3_730 356 HNDTWIK|GG 0.061 . cgd3_730 377 NAIDYSK|PE 0.054 . cgd3_730 390 SNNLINK|SQ 0.113 . cgd3_730 404 SIQEILK|TK 0.061 . cgd3_730 406 QEILKTK|ES 0.070 . cgd3_730 413 ESSPINK|LR 0.062 . cgd3_730 415 SPINKLR|KK 0.123 . cgd3_730 416 PINKLRK|KT 0.092 . cgd3_730 417 INKLRKK|TN 0.101 . ____________________________^_________________

  • Fasta :-

    >cgd3_730 ATGGATTTAAAATTGGAATTTCTCAATAAAACTGAAAATAGAACAACAGGATGCAGTGTA CAATGCATATTTGGCAAAATAATTCTGTTAATAGTGTCAATAATATTATTATTAGGGCTT TTGGTTTGGATTTTCCAGGAGAAGCTACTGTTCTTTCCAAATATTAATGGGAAAAGAGAC TTAGCATCAAACTTCCCAGGATACAGACATCCAAATGAGAATAAAATGAATTCAGAAGAC GTAGTTTTAACTACGGATGATAATGTTAAATTATATTGCTGGTTTATAATACATAAGAAG TTTGACAGATACTCTCATGGACAATCAAGTGCGATGCATTTTAGTTCTAATCTAACAGAA CCTCATCATTCGGAACAAGTTAAAAAAGATGGTCCAGAGAAAAAGATTTTAGATAGAATA AGAAAGGCTCCAAAATATATGAAATTCCATTTCCCTGAATTTTCAGATAGATATGAACAA CAGGAAAAAGCTCCAACAATTGTCTTTTTTCATGGTAATGCTGGCAATATTGGGCACAGA CTACCTAGGTTCTTGGAGTTTTACAATTTGATCGGTGTTAATATATTTGCAGTTTCTTAT AGAGGATATGGGGACAGTGAGGGGACCCCTTCTGAAGAAGGCTTTTATTTGGATGCTAAA GCTTCACTTGAGTACGTCCTTTCTAGGACTGATGTGGTGGACAAGAATATGATCTTTTTA TATGGACATTCCATTGGCGGCGCTGTTGCTATTGATCTCGCTTCTAAGTATAATGTTACT GGCGTTATTCTAGAAAATACCTTCACTAACATTAAATCTGTTGCTTTCAGAGTTTATCCA ATATTTAAGTATTTTGGATTCTTCTTCAAATTCATACAAAGACTTAAATTTGATTCAGTA TCTAAAATCTCACGTGTTAAATCCCCTATCTTATTTGTAGTTGGGAATGAGGATGAAATA ATACCTCCCACACATTCTGTTGAATTATATATGAAGGCGGGATCGCCAAAATCTTTAAAA AAAATTTATTTAGTATCAGGTGGCTCACACAATGACACATGGATTAAAGGCGGAATGGAG TTTTATTTGATGCTGCTACAATTTATATATAATGCCATTGATTATAGTAAACCCGAATTA GAAGTATCTTCAAACAATTTGATAAACAAAAGTCAAGAAGAGACCTTATCTTCAATACAG GAAATTTTAAAAACTAAAGAAAGTTCTCCTATAAATAAGCTAAGAAAAAAAACAAATTAA
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  • Fasta :-

    MDLKLEFLNKTENRTTGCSVQCIFGKIILLIVSIILLLGLLVWIFQEKLLFFPNINGKRD LASNFPGYRHPNENKMNSEDVVLTTDDNVKLYCWFIIHKKFDRYSHGQSSAMHFSSNLTE PHHSEQVKKDGPEKKILDRIRKAPKYMKFHFPEFSDRYEQQEKAPTIVFFHGNAGNIGHR LPRFLEFYNLIGVNIFAVSYRGYGDSEGTPSEEGFYLDAKASLEYVLSRTDVVDKNMIFL YGHSIGGAVAIDLASKYNVTGVILENTFTNIKSVAFRVYPIFKYFGFFFKFIQRLKFDSV SKISRVKSPILFVVGNEDEIIPPTHSVELYMKAGSPKSLKKIYLVSGGSHNDTWIKGGME FYLMLLQFIYNAIDYSKPELEVSSNNLINKSQEETLSSIQEILKTKESSPINKLRKKTN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd3_730335 SMKAGSPKSL0.996unspcgd3_730335 SMKAGSPKSL0.996unspcgd3_730335 SMKAGSPKSL0.996unspcgd3_730391 SLINKSQEET0.992unspcgd3_730209 TDSEGTPSEE0.993unspcgd3_730308 SSRVKSPILF0.994unsp

cgd3_730      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India