cgd4_1320 | Alpha/Beta hydrolase fold-containing protein

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
cgd4_1320OTHER0.9999590.0000060.000035
No Results

  • Fasta :-

    >cgd4_1320 MTNLNNKKLNNNDINSELKIYSQRNVQKCAESFLRVEENNNNSIELINTYRFLNNHIPQD FPKSRIFNFDNKKISETSNYHIRRKSSNSAVKNKQHNNESITEIINHKLQDHFESINHFE KIKFLVSSNYAFENIRKLNILPPIRIYELWKGTPMDIRQILFNAISIILTNRIKIWSNID VKQKDYFIIWGCNYLSQISTYLSIPEIITEQMIKIYYLNIDDPNIENFPDIRPLKNTLIE YCKNELQPKLDILFNEYSCNNNSINNNVRSKSIMKQNRDLNAETFLLIRNNSAFEVSYNN YEQNTHTHPRASSLNNRISSKILNLPLNSPNAFDNNLKIFNNSNTHSSNNCNVNAKSNCQ RRKTWHSGINNLEYIFDEQSPSSFLIIILSLLRLHAIDGILNSRTLSILQEIYLLLNYNN EYFKSSLLIFDSLQMLTFNDIKKSGLKCDTKNLEKGWNKSMRYLKVAGATILGGVVLATA TTIAAPGILAGLGTLGLAFPGILGTAMTAGTSAATMSAVAGVGGAGLSGWKMSRRESPLQ IFNFHQVGKNPDKSGLLPILIGISGWLRNNDDIFMPWKIAFNGVEWMESYTVEFEPEVLS KLGNSIAITMSQDLAIFAGKAILLQTVVGTLTAALSWPITIMQYAATLDNTWAVSRQKTE QAAIILADVLCSIETTGDRPIKLVGYSMGARLIYLTLQIMYDRKQFNKIQDVVLLGLPSS LNTKKWIKARSVVSNRMINVFSRSDWVLAFFYRYMQWGFHVAGISPINVSGVENYDVTGM ITSHDQYPDKIREILYYVNFF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd4_1320.fa Sequence name : cgd4_1320 Sequence length : 801 VALUES OF COMPUTED PARAMETERS Coef20 : 3.479 CoefTot : -0.786 ChDiff : 16 ZoneTo : 12 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.947 2.041 0.370 0.777 MesoH : 1.396 1.152 0.166 0.530 MuHd_075 : 26.078 22.860 8.459 6.420 MuHd_095 : 4.145 1.154 1.359 1.196 MuHd_100 : 11.308 6.904 1.911 1.160 MuHd_105 : 14.071 10.405 2.409 2.362 Hmax_075 : 2.217 10.383 -1.325 3.663 Hmax_095 : -8.800 -2.200 -5.709 0.306 Hmax_100 : -10.400 -2.300 -5.722 -0.240 Hmax_105 : -9.700 3.100 -5.073 1.220 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9738 0.0262 DFMC : 0.9626 0.0374
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 801 cgd4_1320 MTNLNNKKLNNNDINSELKIYSQRNVQKCAESFLRVEENNNNSIELINTYRFLNNHIPQDFPKSRIFNFDNKKISETSNY 80 HIRRKSSNSAVKNKQHNNESITEIINHKLQDHFESINHFEKIKFLVSSNYAFENIRKLNILPPIRIYELWKGTPMDIRQI 160 LFNAISIILTNRIKIWSNIDVKQKDYFIIWGCNYLSQISTYLSIPEIITEQMIKIYYLNIDDPNIENFPDIRPLKNTLIE 240 YCKNELQPKLDILFNEYSCNNNSINNNVRSKSIMKQNRDLNAETFLLIRNNSAFEVSYNNYEQNTHTHPRASSLNNRISS 320 KILNLPLNSPNAFDNNLKIFNNSNTHSSNNCNVNAKSNCQRRKTWHSGINNLEYIFDEQSPSSFLIIILSLLRLHAIDGI 400 LNSRTLSILQEIYLLLNYNNEYFKSSLLIFDSLQMLTFNDIKKSGLKCDTKNLEKGWNKSMRYLKVAGATILGGVVLATA 480 TTIAAPGILAGLGTLGLAFPGILGTAMTAGTSAATMSAVAGVGGAGLSGWKMSRRESPLQIFNFHQVGKNPDKSGLLPIL 560 IGISGWLRNNDDIFMPWKIAFNGVEWMESYTVEFEPEVLSKLGNSIAITMSQDLAIFAGKAILLQTVVGTLTAALSWPIT 640 IMQYAATLDNTWAVSRQKTEQAAIILADVLCSIETTGDRPIKLVGYSMGARLIYLTLQIMYDRKQFNKIQDVVLLGLPSS 720 LNTKKWIKARSVVSNRMINVFSRSDWVLAFFYRYMQWGFHVAGISPINVSGVENYDVTGMITSHDQYPDKIREILYYVNF 800 F 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 . 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd4_1320 7 MTNLNNK|KL 0.061 . cgd4_1320 8 TNLNNKK|LN 0.093 . cgd4_1320 19 DINSELK|IY 0.068 . cgd4_1320 24 LKIYSQR|NV 0.137 . cgd4_1320 28 SQRNVQK|CA 0.096 . cgd4_1320 35 CAESFLR|VE 0.080 . cgd4_1320 51 ELINTYR|FL 0.104 . cgd4_1320 63 IPQDFPK|SR 0.096 . cgd4_1320 65 QDFPKSR|IF 0.088 . cgd4_1320 72 IFNFDNK|KI 0.066 . cgd4_1320 73 FNFDNKK|IS 0.101 . cgd4_1320 83 TSNYHIR|RK 0.102 . cgd4_1320 84 SNYHIRR|KS 0.167 . cgd4_1320 85 NYHIRRK|SS 0.127 . cgd4_1320 92 SSNSAVK|NK 0.069 . cgd4_1320 94 NSAVKNK|QH 0.073 . cgd4_1320 108 TEIINHK|LQ 0.063 . cgd4_1320 121 SINHFEK|IK 0.065 . cgd4_1320 123 NHFEKIK|FL 0.068 . cgd4_1320 136 YAFENIR|KL 0.075 . cgd4_1320 137 AFENIRK|LN 0.061 . cgd4_1320 145 NILPPIR|IY 0.079 . cgd4_1320 151 RIYELWK|GT 0.073 . cgd4_1320 158 GTPMDIR|QI 0.076 . cgd4_1320 172 SIILTNR|IK 0.082 . cgd4_1320 174 ILTNRIK|IW 0.063 . cgd4_1320 182 WSNIDVK|QK 0.066 . cgd4_1320 184 NIDVKQK|DY 0.079 . cgd4_1320 214 ITEQMIK|IY 0.062 . cgd4_1320 232 ENFPDIR|PL 0.077 . cgd4_1320 235 PDIRPLK|NT 0.099 . cgd4_1320 243 TLIEYCK|NE 0.056 . cgd4_1320 249 KNELQPK|LD 0.058 . cgd4_1320 269 SINNNVR|SK 0.152 . cgd4_1320 271 NNNVRSK|SI 0.132 . cgd4_1320 275 RSKSIMK|QN 0.065 . cgd4_1320 278 SIMKQNR|DL 0.169 . cgd4_1320 289 ETFLLIR|NN 0.086 . cgd4_1320 310 NTHTHPR|AS 0.124 . cgd4_1320 317 ASSLNNR|IS 0.150 . cgd4_1320 321 NNRISSK|IL 0.068 . cgd4_1320 338 AFDNNLK|IF 0.059 . cgd4_1320 356 NCNVNAK|SN 0.110 . cgd4_1320 361 AKSNCQR|RK 0.093 . cgd4_1320 362 KSNCQRR|KT 0.249 . cgd4_1320 363 SNCQRRK|TW 0.130 . cgd4_1320 393 IILSLLR|LH 0.060 . cgd4_1320 404 DGILNSR|TL 0.079 . cgd4_1320 424 YNNEYFK|SS 0.084 . cgd4_1320 442 LTFNDIK|KS 0.062 . cgd4_1320 443 TFNDIKK|SG 0.121 . cgd4_1320 447 IKKSGLK|CD 0.060 . cgd4_1320 451 GLKCDTK|NL 0.070 . cgd4_1320 455 DTKNLEK|GW 0.063 . cgd4_1320 459 LEKGWNK|SM 0.070 . cgd4_1320 462 GWNKSMR|YL 0.223 . cgd4_1320 465 KSMRYLK|VA 0.242 . cgd4_1320 531 AGLSGWK|MS 0.054 . cgd4_1320 534 SGWKMSR|RE 0.083 . cgd4_1320 535 GWKMSRR|ES 0.153 . cgd4_1320 549 NFHQVGK|NP 0.073 . cgd4_1320 553 VGKNPDK|SG 0.064 . cgd4_1320 568 GISGWLR|NN 0.109 . cgd4_1320 578 DIFMPWK|IA 0.077 . cgd4_1320 601 EPEVLSK|LG 0.065 . cgd4_1320 620 LAIFAGK|AI 0.063 . cgd4_1320 656 NTWAVSR|QK 0.087 . cgd4_1320 658 WAVSRQK|TE 0.060 . cgd4_1320 679 IETTGDR|PI 0.079 . cgd4_1320 682 TGDRPIK|LV 0.232 . cgd4_1320 691 GYSMGAR|LI 0.093 . cgd4_1320 703 LQIMYDR|KQ 0.080 . cgd4_1320 704 QIMYDRK|QF 0.098 . cgd4_1320 708 DRKQFNK|IQ 0.076 . cgd4_1320 724 PSSLNTK|KW 0.072 . cgd4_1320 725 SSLNTKK|WI 0.096 . cgd4_1320 728 NTKKWIK|AR 0.062 . cgd4_1320 730 KKWIKAR|SV 0.323 . cgd4_1320 736 RSVVSNR|MI 0.094 . cgd4_1320 743 MINVFSR|SD 0.141 . cgd4_1320 753 VLAFFYR|YM 0.131 . cgd4_1320 790 HDQYPDK|IR 0.064 . cgd4_1320 792 QYPDKIR|EI 0.090 . ____________________________^_________________

  • Fasta :-

    >cgd4_1320 ATGACCAATTTAAACAATAAAAAACTGAATAACAATGATATAAATTCGGAATTGAAAATA TACTCCCAAAGAAATGTACAAAAATGTGCAGAATCATTTTTGAGAGTTGAAGAAAATAAT AACAATAGTATTGAATTAATTAATACATACAGATTTTTGAATAACCATATTCCACAAGAT TTCCCAAAATCAAGAATATTTAATTTTGATAATAAAAAAATTTCGGAAACAAGTAATTAC CATATTAGAAGAAAATCAAGTAATTCTGCAGTAAAGAATAAACAGCATAATAATGAATCA ATAACTGAAATTATTAACCATAAACTTCAAGACCATTTTGAAAGTATTAATCATTTTGAA AAGATAAAATTCTTGGTTTCAAGTAATTATGCTTTTGAAAATATCAGAAAATTGAATATT CTTCCTCCAATTAGAATTTATGAGCTTTGGAAAGGGACTCCAATGGATATTAGACAGATT TTATTTAATGCAATTTCCATAATTTTAACAAATCGTATAAAAATTTGGTCCAATATTGAT GTGAAACAAAAAGATTACTTTATTATATGGGGTTGTAATTATTTAAGCCAAATAAGTACT TATTTATCAATACCAGAAATAATAACAGAACAAATGATAAAAATATACTATTTAAATATT GATGATCCAAATATTGAGAATTTTCCAGATATTAGACCATTAAAAAATACTTTGATAGAG TATTGTAAAAATGAATTACAGCCAAAACTTGACATTTTATTTAATGAATATAGTTGTAAT AATAATAGTATTAATAATAATGTAAGATCCAAGAGTATTATGAAGCAAAATAGGGATTTA AATGCTGAAACTTTTTTACTGATCAGAAATAATAGTGCATTTGAAGTTTCATATAATAAT TATGAACAAAATACTCATACACATCCAAGAGCAAGTTCATTAAATAATAGAATATCTTCG AAAATATTAAATTTACCATTGAATTCCCCAAATGCTTTTGATAATAATTTGAAGATATTT AATAATAGCAATACTCATTCCAGTAATAATTGTAATGTTAATGCAAAATCAAATTGCCAA AGAAGAAAAACTTGGCATTCAGGCATTAATAATCTGGAATACATATTTGATGAACAATCA CCAAGCTCATTTTTAATAATAATATTATCATTATTAAGACTTCATGCAATTGATGGAATA TTAAATTCACGTACTTTATCAATTCTCCAAGAAATTTATCTTTTGTTAAATTATAATAAT GAATATTTTAAATCATCACTTTTAATTTTTGATTCTCTTCAAATGTTAACTTTTAATGAT ATTAAAAAGAGTGGGCTTAAATGCGATACCAAAAATCTTGAAAAAGGTTGGAATAAATCA ATGAGATATTTAAAAGTTGCTGGTGCTACTATTTTGGGCGGTGTTGTATTGGCAACAGCT ACAACAATTGCAGCACCTGGTATTCTTGCAGGATTGGGCACATTAGGATTAGCTTTTCCT GGAATTCTTGGAACAGCCATGACTGCTGGAACAAGTGCAGCCACAATGTCAGCAGTTGCT GGCGTAGGGGGTGCAGGTCTTTCAGGATGGAAAATGAGTAGAAGAGAATCTCCATTACAA ATTTTTAACTTTCATCAAGTTGGTAAAAATCCGGATAAATCTGGTCTTCTTCCTATTTTA ATTGGTATTAGCGGTTGGCTTAGAAATAATGATGATATATTTATGCCTTGGAAAATTGCT TTTAATGGAGTTGAATGGATGGAAAGTTATACTGTAGAATTTGAACCTGAAGTGTTATCA AAGTTAGGTAATTCCATAGCAATAACAATGTCACAAGATCTTGCCATTTTTGCAGGAAAA GCTATTTTACTTCAAACAGTGGTTGGTACTTTAACAGCAGCTTTATCCTGGCCTATAACA ATTATGCAATATGCTGCAACTCTCGATAATACTTGGGCAGTTTCAAGACAAAAAACTGAG CAGGCTGCTATAATTCTTGCTGATGTTTTATGTTCAATTGAAACTACAGGTGATAGACCC ATTAAACTTGTTGGTTATAGTATGGGTGCTAGACTTATATATTTAACATTACAAATTATG TATGATCGTAAACAATTCAATAAAATTCAAGATGTTGTATTGTTGGGATTACCTTCATCT TTAAATACCAAGAAATGGATTAAAGCTAGGTCTGTTGTTTCAAATCGAATGATTAATGTA TTTTCAAGGTCTGACTGGGTTCTTGCATTTTTTTATAGATATATGCAGTGGGGATTCCAT GTCGCAGGAATTTCACCCATAAATGTTTCTGGTGTTGAAAATTATGATGTAACGGGAATG ATTACCTCGCATGATCAATATCCTGATAAAATTCGTGAAATTTTATATTATGTTAACTTT TTTTAG
  • Download Fasta

  • Fasta :-

    MTNLNNKKLNNNDINSELKIYSQRNVQKCAESFLRVEENNNNSIELINTYRFLNNHIPQD FPKSRIFNFDNKKISETSNYHIRRKSSNSAVKNKQHNNESITEIINHKLQDHFESINHFE KIKFLVSSNYAFENIRKLNILPPIRIYELWKGTPMDIRQILFNAISIILTNRIKIWSNID VKQKDYFIIWGCNYLSQISTYLSIPEIITEQMIKIYYLNIDDPNIENFPDIRPLKNTLIE YCKNELQPKLDILFNEYSCNNNSINNNVRSKSIMKQNRDLNAETFLLIRNNSAFEVSYNN YEQNTHTHPRASSLNNRISSKILNLPLNSPNAFDNNLKIFNNSNTHSSNNCNVNAKSNCQ RRKTWHSGINNLEYIFDEQSPSSFLIIILSLLRLHAIDGILNSRTLSILQEIYLLLNYNN EYFKSSLLIFDSLQMLTFNDIKKSGLKCDTKNLEKGWNKSMRYLKVAGATILGGVVLATA TTIAAPGILAGLGTLGLAFPGILGTAMTAGTSAATMSAVAGVGGAGLSGWKMSRRESPLQ IFNFHQVGKNPDKSGLLPILIGISGWLRNNDDIFMPWKIAFNGVEWMESYTVEFEPEVLS KLGNSIAITMSQDLAIFAGKAILLQTVVGTLTAALSWPITIMQYAATLDNTWAVSRQKTE QAAIILADVLCSIETTGDRPIKLVGYSMGARLIYLTLQIMYDRKQFNKIQDVVLLGLPSS LNTKKWIKARSVVSNRMINVFSRSDWVLAFFYRYMQWGFHVAGISPINVSGVENYDVTGM ITSHDQYPDKIREILYYVNFF

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd4_1320533 SGWKMSRRES0.993unspcgd4_1320533 SGWKMSRRES0.993unspcgd4_1320533 SGWKMSRRES0.993unspcgd4_1320537 SSRRESPLQI0.997unspcgd4_132086 SIRRKSSNSA0.991unspcgd4_1320312 SHPRASSLNN0.992unsp

cgd4_1320      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India