cgd4_3760 | Microsomal signal peptidase subunit(SPC12)

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Fasta :-
>cgd4_3760 MLGTILHIKNCLEENIHDFSGQDLAYKIQERLVILTGIMSFIIGFYHQKFYYTVLTTLLG LAITLLVCVPSWPMYCRNKVNWLPSENREEKKKKREADKQE
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MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd4_3760.fa Sequence name : cgd4_3760 Sequence length : 101 VALUES OF COMPUTED PARAMETERS Coef20 : 3.414 CoefTot : -0.370 ChDiff : 2 ZoneTo : 12 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.182 2.412 0.516 0.745 MesoH : 0.005 0.658 -0.229 0.340 MuHd_075 : 35.106 22.442 9.627 6.410 MuHd_095 : 29.591 21.963 9.281 5.253 MuHd_100 : 27.645 26.015 9.165 5.929 MuHd_105 : 20.034 24.337 7.894 5.267 Hmax_075 : 9.537 12.163 0.353 4.680 Hmax_095 : 11.900 15.000 2.436 5.110 Hmax_100 : 11.900 19.100 2.436 5.540 Hmax_105 : 6.767 19.250 0.951 5.367 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9505 0.0495 DFMC : 0.9580 0.0420

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 101 cgd4_3760 MLGTILHIKNCLEENIHDFSGQDLAYKIQERLVILTGIMSFIIGFYHQKFYYTVLTTLLGLAITLLVCVPSWPMYCRNKV 80 NWLPSENREEKKKKREADKQE 160 ................................................................................ 80 ..............P...... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ cgd4_3760 9 GTILHIK|NC 0.058 . cgd4_3760 27 GQDLAYK|IQ 0.058 . cgd4_3760 31 AYKIQER|LV 0.099 . cgd4_3760 49 IGFYHQK|FY 0.086 . cgd4_3760 77 SWPMYCR|NK 0.093 . cgd4_3760 79 PMYCRNK|VN 0.053 . cgd4_3760 88 WLPSENR|EE 0.072 . cgd4_3760 91 SENREEK|KK 0.119 . cgd4_3760 92 ENREEKK|KK 0.119 . cgd4_3760 93 NREEKKK|KR 0.106 . cgd4_3760 94 REEKKKK|RE 0.129 . cgd4_3760 95 EEKKKKR|EA 0.514 *ProP* cgd4_3760 99 KKREADK|QE 0.071 . ____________________________^_________________

Fasta :-
>cgd4_3760 AAAATATATATTTATATATATTCAAGATATATCACCTATTTCTTGAAAATCTGCAAATAT TACAAACTGAAGAAAAGTAAAAGATTAAAAGAAATACAATGTTAGGAACAATACTACACA TCAAAAATTGTTTAGAGGAAAATATTCACGATTTTTCCGGACAAGATCTAGCATATAAGA TTCAAGAACGACTGGTTATATTAACAGGGATTATGTCGTTTATTATTGGATTTTACCACC AAAAGTTCTATTATACGGTACTGACAACTTTATTAGGTCTGGCTATCACTCTTCTAGTTT GTGTTCCTTCCTGGCCAATGTATTGCAGAAACAAAGTTAACTGGCTCCCTTCTGAAAATA GAGAGGAAAAAAAGAAAAAGCGTGAAGCTGATAAGCAAGAGTGAAAGATCGGGAAGAAAA TTAAAACAAAAAATATTACTTCTTCTATGCAGTATCCAAATTCATACCTCCCTCAAAGCC TG
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