cgd5_1993 | Peptidase family M60 domain containing protein

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
cgd5_1993OTHER0.9973430.0026440.000014
No Results

  • Fasta :-

    >cgd5_1993 MEISPKVWFLIPSNGSDYSEFDVCVPNKKHHTTLTKSHFKVYTCKNVDFIRNLKLCRLNL ELEELVNFSEDNSQWEETNNFEIIINDYMQYSIILSIYINSAYISNQLFMLRLKSDDHHI ININESQNESINFSLRSRLIELNTCLIRDHLLKGLNKIEINGTPGQIHCFGEKTFGLFWG KNHNQGSFGWCSGITLYGEGAILSFSHESFLIDKNGHQILNIILENFHKFKGETKKDKCI GFLGFSNLESSEFINGISKNNFDYFKGSFFEYVELESIEKSVSNDELNILVINGNKEKKN TVNEIKLSSKILKNYICSGGLLIIGLCPWGWEYISGGKVNSNSISNDINKEMGMIFTNEY FCNEVNSVNSKNQSNYFSSSIYYWKKLLNSMNGTENDIKLNLDEYFIMTKDIECHLNMDI KTNEQNKILNLIAQLLKKRNYLNLKPPFNMEEKINILYMAIACSRLKEDKIHEICDLEGD KYTFNDFDDWISMNQFWKIESNITNFWWREEHAELNLSRNELHCPVYDIPFEWQNTGVYI KHKSFLKAEFIPINKYSLTPIKSMLHVGSHSDFLRYKEEKIMRRVPLIKKIYNWSISETN YITIESPCEGIVYFEYIPNYDHTNTKGSLKRPNSNESHGSLIGFIKFIPLIGKEVVTTPI YTIDKLQLDTCSFDNRTVITDKHLWARIFSEANRKFSNLLPAWTELHGKKIILTIPSRIL YSIDCLIVDDLLEFWDKVIDTQNELYFNYKWTKERIVCDIQISDGYMHS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd5_1993.fa Sequence name : cgd5_1993 Sequence length : 769 VALUES OF COMPUTED PARAMETERS Coef20 : 3.363 CoefTot : -0.778 ChDiff : -13 ZoneTo : 16 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.718 1.629 0.372 0.695 MesoH : -0.461 0.172 -0.423 0.236 MuHd_075 : 13.046 3.377 2.582 0.787 MuHd_095 : 30.467 14.736 8.148 4.850 MuHd_100 : 26.646 12.261 6.315 4.499 MuHd_105 : 14.877 9.978 2.988 3.114 Hmax_075 : 6.883 5.017 -1.275 3.220 Hmax_095 : 12.100 11.800 1.443 5.270 Hmax_100 : 11.900 11.400 0.793 4.510 Hmax_105 : 6.212 9.200 -1.124 3.264 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9900 0.0100 DFMC : 0.9898 0.0102
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 769 cgd5_1993 MEISPKVWFLIPSNGSDYSEFDVCVPNKKHHTTLTKSHFKVYTCKNVDFIRNLKLCRLNLELEELVNFSEDNSQWEETNN 80 FEIIINDYMQYSIILSIYINSAYISNQLFMLRLKSDDHHIININESQNESINFSLRSRLIELNTCLIRDHLLKGLNKIEI 160 NGTPGQIHCFGEKTFGLFWGKNHNQGSFGWCSGITLYGEGAILSFSHESFLIDKNGHQILNIILENFHKFKGETKKDKCI 240 GFLGFSNLESSEFINGISKNNFDYFKGSFFEYVELESIEKSVSNDELNILVINGNKEKKNTVNEIKLSSKILKNYICSGG 320 LLIIGLCPWGWEYISGGKVNSNSISNDINKEMGMIFTNEYFCNEVNSVNSKNQSNYFSSSIYYWKKLLNSMNGTENDIKL 400 NLDEYFIMTKDIECHLNMDIKTNEQNKILNLIAQLLKKRNYLNLKPPFNMEEKINILYMAIACSRLKEDKIHEICDLEGD 480 KYTFNDFDDWISMNQFWKIESNITNFWWREEHAELNLSRNELHCPVYDIPFEWQNTGVYIKHKSFLKAEFIPINKYSLTP 560 IKSMLHVGSHSDFLRYKEEKIMRRVPLIKKIYNWSISETNYITIESPCEGIVYFEYIPNYDHTNTKGSLKRPNSNESHGS 640 LIGFIKFIPLIGKEVVTTPIYTIDKLQLDTCSFDNRTVITDKHLWARIFSEANRKFSNLLPAWTELHGKKIILTIPSRIL 720 YSIDCLIVDDLLEFWDKVIDTQNELYFNYKWTKERIVCDIQISDGYMHS 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd5_1993 6 -MEISPK|VW 0.061 . cgd5_1993 28 DVCVPNK|KH 0.065 . cgd5_1993 29 VCVPNKK|HH 0.086 . cgd5_1993 36 HHTTLTK|SH 0.081 . cgd5_1993 40 LTKSHFK|VY 0.062 . cgd5_1993 45 FKVYTCK|NV 0.083 . cgd5_1993 51 KNVDFIR|NL 0.082 . cgd5_1993 54 DFIRNLK|LC 0.077 . cgd5_1993 57 RNLKLCR|LN 0.074 . cgd5_1993 112 NQLFMLR|LK 0.082 . cgd5_1993 114 LFMLRLK|SD 0.076 . cgd5_1993 136 SINFSLR|SR 0.144 . cgd5_1993 138 NFSLRSR|LI 0.089 . cgd5_1993 148 LNTCLIR|DH 0.075 . cgd5_1993 153 IRDHLLK|GL 0.085 . cgd5_1993 157 LLKGLNK|IE 0.062 . cgd5_1993 173 IHCFGEK|TF 0.057 . cgd5_1993 181 FGLFWGK|NH 0.060 . cgd5_1993 214 ESFLIDK|NG 0.065 . cgd5_1993 229 ILENFHK|FK 0.073 . cgd5_1993 231 ENFHKFK|GE 0.076 . cgd5_1993 235 KFKGETK|KD 0.059 . cgd5_1993 236 FKGETKK|DK 0.197 . cgd5_1993 238 GETKKDK|CI 0.082 . cgd5_1993 259 FINGISK|NN 0.066 . cgd5_1993 266 NNFDYFK|GS 0.065 . cgd5_1993 280 ELESIEK|SV 0.090 . cgd5_1993 296 LVINGNK|EK 0.053 . cgd5_1993 298 INGNKEK|KN 0.069 . cgd5_1993 299 NGNKEKK|NT 0.106 . cgd5_1993 306 NTVNEIK|LS 0.074 . cgd5_1993 310 EIKLSSK|IL 0.064 . cgd5_1993 313 LSSKILK|NY 0.078 . cgd5_1993 338 EYISGGK|VN 0.056 . cgd5_1993 350 ISNDINK|EM 0.082 . cgd5_1993 371 VNSVNSK|NQ 0.074 . cgd5_1993 385 SSIYYWK|KL 0.067 . cgd5_1993 386 SIYYWKK|LL 0.105 . cgd5_1993 399 GTENDIK|LN 0.062 . cgd5_1993 410 EYFIMTK|DI 0.077 . cgd5_1993 421 HLNMDIK|TN 0.071 . cgd5_1993 427 KTNEQNK|IL 0.065 . cgd5_1993 437 LIAQLLK|KR 0.053 . cgd5_1993 438 IAQLLKK|RN 0.081 . cgd5_1993 439 AQLLKKR|NY 0.108 . cgd5_1993 445 RNYLNLK|PP 0.062 . cgd5_1993 453 PFNMEEK|IN 0.061 . cgd5_1993 465 MAIACSR|LK 0.101 . cgd5_1993 467 IACSRLK|ED 0.058 . cgd5_1993 470 SRLKEDK|IH 0.068 . cgd5_1993 481 CDLEGDK|YT 0.062 . cgd5_1993 498 SMNQFWK|IE 0.074 . cgd5_1993 509 ITNFWWR|EE 0.117 . cgd5_1993 519 AELNLSR|NE 0.070 . cgd5_1993 541 NTGVYIK|HK 0.062 . cgd5_1993 543 GVYIKHK|SF 0.112 . cgd5_1993 547 KHKSFLK|AE 0.058 . cgd5_1993 555 EFIPINK|YS 0.057 . cgd5_1993 562 YSLTPIK|SM 0.080 . cgd5_1993 575 SHSDFLR|YK 0.155 . cgd5_1993 577 SDFLRYK|EE 0.062 . cgd5_1993 580 LRYKEEK|IM 0.070 . cgd5_1993 583 KEEKIMR|RV 0.095 . cgd5_1993 584 EEKIMRR|VP 0.085 . cgd5_1993 589 RRVPLIK|KI 0.066 . cgd5_1993 590 RVPLIKK|IY 0.079 . cgd5_1993 626 YDHTNTK|GS 0.064 . cgd5_1993 630 NTKGSLK|RP 0.060 . cgd5_1993 631 TKGSLKR|PN 0.238 . cgd5_1993 646 SLIGFIK|FI 0.077 . cgd5_1993 653 FIPLIGK|EV 0.061 . cgd5_1993 665 PIYTIDK|LQ 0.050 . cgd5_1993 676 TCSFDNR|TV 0.138 . cgd5_1993 682 RTVITDK|HL 0.071 . cgd5_1993 687 DKHLWAR|IF 0.131 . cgd5_1993 694 IFSEANR|KF 0.107 . cgd5_1993 695 FSEANRK|FS 0.074 . cgd5_1993 709 WTELHGK|KI 0.064 . cgd5_1993 710 TELHGKK|II 0.110 . cgd5_1993 718 ILTIPSR|IL 0.077 . cgd5_1993 737 LLEFWDK|VI 0.068 . cgd5_1993 750 ELYFNYK|WT 0.064 . cgd5_1993 753 FNYKWTK|ER 0.062 . cgd5_1993 755 YKWTKER|IV 0.170 . ____________________________^_________________

  • Fasta :-

    >cgd5_1993 ATGGAAATATCTCCTAAGGTGTGGTTTTTGATACCGAGTAATGGATCTGACTACAGTGAA TTTGATGTTTGTGTTCCAAATAAGAAGCATCATACTACACTTACAAAAAGTCACTTTAAA GTATATACGTGCAAAAATGTAGATTTTATTCGGAATTTAAAATTGTGCAGATTAAATTTG GAATTAGAGGAACTTGTGAATTTTTCCGAAGATAATTCACAATGGGAAGAGACTAACAAT TTTGAGATTATTATTAATGATTATATGCAATATAGCATAATTTTGAGTATATATATAAAT AGTGCATACATTAGTAACCAATTATTTATGCTTCGTTTAAAAAGCGATGACCATCATATC ATTAATATTAATGAATCTCAGAATGAATCTATTAACTTTAGTTTAAGAAGTCGCTTAATT GAACTTAATACATGTTTAATAAGAGATCACCTTTTAAAAGGGTTGAATAAAATAGAAATA AATGGGACACCTGGGCAAATACATTGCTTTGGGGAAAAAACTTTTGGACTATTTTGGGGG AAAAATCATAACCAGGGTAGCTTTGGTTGGTGCTCTGGAATAACTTTATATGGGGAAGGG GCGATTTTATCGTTCTCTCATGAAAGTTTTTTGATTGATAAAAATGGACATCAAATATTA AATATTATTTTAGAGAACTTCCATAAATTCAAAGGAGAAACAAAAAAAGATAAATGTATT GGGTTTTTAGGATTTTCTAACTTAGAGTCATCAGAATTTATTAATGGTATTAGCAAAAAC AATTTTGATTATTTTAAAGGCTCATTTTTCGAATATGTTGAATTAGAAAGCATTGAAAAA AGCGTTTCTAATGATGAACTAAATATTTTAGTAATTAATGGAAACAAAGAAAAAAAAAAT ACGGTAAATGAGATAAAATTATCTTCAAAAATACTCAAGAATTATATTTGTTCAGGTGGG TTGCTTATTATCGGATTATGCCCATGGGGATGGGAATATATCAGCGGTGGAAAAGTAAAT TCCAATTCAATTTCGAATGATATTAATAAAGAGATGGGAATGATTTTTACAAACGAATAT TTTTGCAATGAAGTAAATTCTGTAAACTCCAAAAATCAATCAAATTATTTTTCAAGCTCA ATTTACTATTGGAAAAAGTTATTGAATTCAATGAATGGTACAGAAAACGACATTAAATTA AATCTTGATGAATATTTTATTATGACAAAAGATATTGAATGCCACCTAAATATGGATATA AAAACAAACGAGCAAAATAAAATTCTTAATTTAATAGCTCAACTACTAAAAAAAAGGAAT TATTTGAATTTGAAACCTCCTTTCAATATGGAGGAAAAAATTAATATCTTGTATATGGCA ATTGCTTGTTCAAGATTAAAAGAGGATAAAATTCATGAAATTTGTGATTTAGAAGGTGAT AAGTACACTTTCAATGATTTTGATGATTGGATCAGTATGAATCAATTTTGGAAAATAGAA AGTAATATAACGAATTTTTGGTGGAGAGAAGAGCATGCGGAATTAAATTTATCAAGAAAT GAATTGCATTGCCCAGTTTATGATATTCCATTTGAGTGGCAAAATACTGGAGTTTACATT AAACACAAAAGTTTTTTAAAAGCTGAATTTATTCCCATAAACAAATATTCTTTAACGCCA ATTAAATCAATGTTACACGTTGGCAGTCACAGTGATTTTCTCAGATATAAAGAAGAAAAA ATAATGAGAAGGGTTCCGTTAATAAAAAAAATTTATAATTGGAGTATCTCTGAGACAAAT TATATAACTATCGAGTCCCCATGCGAAGGAATTGTGTATTTCGAATATATTCCAAATTAT GACCATACAAATACAAAAGGATCATTAAAAAGGCCAAACAGTAATGAATCGCATGGGAGT TTAATAGGATTTATTAAGTTCATACCATTAATTGGAAAAGAAGTGGTAACAACTCCCATT TATACAATTGATAAGTTGCAGCTTGATACTTGCTCATTTGATAATAGAACAGTAATTACG GATAAACATTTATGGGCAAGAATTTTTTCAGAGGCAAACAGAAAGTTCTCTAATTTATTA CCTGCTTGGACCGAACTGCATGGAAAGAAAATAATCCTTACGATCCCAAGCAGAATTTTG TATAGTATAGACTGCTTAATTGTTGACGATTTACTTGAGTTTTGGGATAAAGTTATTGAT ACTCAAAATGAGCTTTACTTTAATTATAAATGGACTAAGGAAAGAATTGTTTGCGATATA CAAATTTCAGATGGATATATGCATAGTG
  • Download Fasta

  • Fasta :-

    MEISPKVWFLIPSNGSDYSEFDVCVPNKKHHTTLTKSHFKVYTCKNVDFIRNLKLCRLNL ELEELVNFSEDNSQWEETNNFEIIINDYMQYSIILSIYINSAYISNQLFMLRLKSDDHHI ININESQNESINFSLRSRLIELNTCLIRDHLLKGLNKIEINGTPGQIHCFGEKTFGLFWG KNHNQGSFGWCSGITLYGEGAILSFSHESFLIDKNGHQILNIILENFHKFKGETKKDKCI GFLGFSNLESSEFINGISKNNFDYFKGSFFEYVELESIEKSVSNDELNILVINGNKEKKN TVNEIKLSSKILKNYICSGGLLIIGLCPWGWEYISGGKVNSNSISNDINKEMGMIFTNEY FCNEVNSVNSKNQSNYFSSSIYYWKKLLNSMNGTENDIKLNLDEYFIMTKDIECHLNMDI KTNEQNKILNLIAQLLKKRNYLNLKPPFNMEEKINILYMAIACSRLKEDKIHEICDLEGD KYTFNDFDDWISMNQFWKIESNITNFWWREEHAELNLSRNELHCPVYDIPFEWQNTGVYI KHKSFLKAEFIPINKYSLTPIKSMLHVGSHSDFLRYKEEKIMRRVPLIKKIYNWSISETN YITIESPCEGIVYFEYIPNYDHTNTKGSLKRPNSNESHGSLIGFIKFIPLIGKEVVTTPI YTIDKLQLDTCSFDNRTVITDKHLWARIFSEANRKFSNLLPAWTELHGKKIILTIPSRIL YSIDCLIVDDLLEFWDKVIDTQNELYFNYKWTKERIVCDIQISDGYMHS

    No Results
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IDSitePeptideScoreMethod
cgd5_1993634 SKRPNSNESH0.992unsp

cgd5_1993      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India