cgd5_2400 | UbiB domain containing protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      GO:0004672      

  • Computed_GO_Functions:  ATP binding      protein kinase activity      

  • Computed_GO_Process_IDs:  GO:0006468      

  • Computed_GO_Processes:  protein phosphorylation      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >cgd5_2400 MNELDSWNRKWRTLWCWTHIYVHYKRAQIYTRNLPEEVKYIYWNSKHSQFAELIWRNISE LRGWWIKVGQFLSTRGDLLPREYVTYLGKLQDIMPCMEWNIVEGILKEELGKDIEKVFKE IQEKPIAAASISQVHKAVLSEGEKKVVIKIQYPNIQETLNHDMKNLEQLTWAFGLLEDYS DSIHILNEWKSSAYSELDFKNELKNQKRAYEMFEDSGIEIIIPKVYTEYTTEKILTMEYI KGFNILNKMLLKENRVNKRELLEILCDSFAYQIHIHGFFHGDPQPSNILVVYDELKRKYI PAILDWGMVKIFDKSKQIAFSK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd5_2400.fa Sequence name : cgd5_2400 Sequence length : 322 VALUES OF COMPUTED PARAMETERS Coef20 : 4.368 CoefTot : -0.134 ChDiff : -1 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.318 0.741 -0.235 0.436 MesoH : -1.244 0.030 -0.606 0.139 MuHd_075 : 12.082 8.009 2.447 2.286 MuHd_095 : 20.748 7.520 2.950 5.613 MuHd_100 : 29.570 11.347 3.156 7.579 MuHd_105 : 36.154 15.278 4.349 8.990 Hmax_075 : -4.725 -2.100 -4.267 -0.035 Hmax_095 : 4.300 0.700 -3.904 3.840 Hmax_100 : 8.300 0.700 -3.450 3.840 Hmax_105 : 15.900 6.100 -1.326 5.220 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4823 0.5177 DFMC : 0.6791 0.3209
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 322 cgd5_2400 MNELDSWNRKWRTLWCWTHIYVHYKRAQIYTRNLPEEVKYIYWNSKHSQFAELIWRNISELRGWWIKVGQFLSTRGDLLP 80 REYVTYLGKLQDIMPCMEWNIVEGILKEELGKDIEKVFKEIQEKPIAAASISQVHKAVLSEGEKKVVIKIQYPNIQETLN 160 HDMKNLEQLTWAFGLLEDYSDSIHILNEWKSSAYSELDFKNELKNQKRAYEMFEDSGIEIIIPKVYTEYTTEKILTMEYI 240 KGFNILNKMLLKENRVNKRELLEILCDSFAYQIHIHGFFHGDPQPSNILVVYDELKRKYIPAILDWGMVKIFDKSKQIAF 320 SK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd5_2400 9 ELDSWNR|KW 0.074 . cgd5_2400 10 LDSWNRK|WR 0.082 . cgd5_2400 12 SWNRKWR|TL 0.440 . cgd5_2400 25 HIYVHYK|RA 0.078 . cgd5_2400 26 IYVHYKR|AQ 0.143 . cgd5_2400 32 RAQIYTR|NL 0.091 . cgd5_2400 39 NLPEEVK|YI 0.065 . cgd5_2400 46 YIYWNSK|HS 0.066 . cgd5_2400 56 FAELIWR|NI 0.093 . cgd5_2400 62 RNISELR|GW 0.116 . cgd5_2400 67 LRGWWIK|VG 0.056 . cgd5_2400 75 GQFLSTR|GD 0.069 . cgd5_2400 81 RGDLLPR|EY 0.077 . cgd5_2400 89 YVTYLGK|LQ 0.061 . cgd5_2400 107 IVEGILK|EE 0.051 . cgd5_2400 112 LKEELGK|DI 0.097 . cgd5_2400 116 LGKDIEK|VF 0.058 . cgd5_2400 119 DIEKVFK|EI 0.068 . cgd5_2400 124 FKEIQEK|PI 0.066 . cgd5_2400 136 SISQVHK|AV 0.093 . cgd5_2400 144 VLSEGEK|KV 0.067 . cgd5_2400 145 LSEGEKK|VV 0.136 . cgd5_2400 149 EKKVVIK|IQ 0.072 . cgd5_2400 164 TLNHDMK|NL 0.084 . cgd5_2400 190 HILNEWK|SS 0.076 . cgd5_2400 200 YSELDFK|NE 0.053 . cgd5_2400 204 DFKNELK|NQ 0.061 . cgd5_2400 207 NELKNQK|RA 0.064 . cgd5_2400 208 ELKNQKR|AY 0.250 . cgd5_2400 224 IEIIIPK|VY 0.060 . cgd5_2400 233 TEYTTEK|IL 0.063 . cgd5_2400 241 LTMEYIK|GF 0.062 . cgd5_2400 248 GFNILNK|ML 0.072 . cgd5_2400 252 LNKMLLK|EN 0.060 . cgd5_2400 255 MLLKENR|VN 0.083 . cgd5_2400 258 KENRVNK|RE 0.098 . cgd5_2400 259 ENRVNKR|EL 0.209 . cgd5_2400 296 VVYDELK|RK 0.052 . cgd5_2400 297 VYDELKR|KY 0.108 . cgd5_2400 298 YDELKRK|YI 0.122 . cgd5_2400 310 LDWGMVK|IF 0.064 . cgd5_2400 314 MVKIFDK|SK 0.082 . cgd5_2400 316 KIFDKSK|QI 0.065 . cgd5_2400 322 KQIAFSK|-- 0.069 . ____________________________^_________________

  • Fasta :-

    >cgd5_2400 ATGAATGAGCTAGATTCTTGGAACAGAAAATGGAGAACATTATGGTGTTGGACTCATATA TATGTTCATTACAAAAGAGCTCAGATTTATACAAGAAATTTACCTGAGGAAGTAAAATAT ATATATTGGAATAGTAAGCATTCTCAGTTTGCTGAATTGATATGGAGAAATATATCAGAG TTACGAGGATGGTGGATTAAAGTGGGGCAGTTTTTGTCAACAAGAGGAGATTTACTTCCA AGAGAGTATGTGACATATTTGGGTAAATTACAAGATATAATGCCCTGTATGGAGTGGAAT ATTGTGGAAGGAATATTAAAGGAGGAATTAGGTAAGGATATTGAAAAAGTGTTTAAAGAG ATACAAGAAAAGCCAATTGCAGCAGCATCAATATCTCAAGTACATAAAGCAGTATTGAGT GAAGGAGAGAAAAAAGTAGTGATTAAAATACAGTATCCAAATATTCAAGAGACTCTTAAT CATGATATGAAGAATTTGGAACAATTAACATGGGCTTTTGGTCTGTTAGAAGATTATTCT GATTCTATTCATATTCTAAATGAATGGAAAAGCTCTGCGTATTCAGAACTTGATTTTAAG AATGAGCTAAAGAATCAAAAGAGAGCATATGAGATGTTTGAGGATTCAGGGATAGAAATA ATTATTCCTAAAGTTTATACAGAATATACAACTGAAAAGATATTAACAATGGAATATATT AAAGGTTTTAATATATTAAATAAAATGCTATTAAAAGAAAATAGAGTTAATAAAAGGGAA TTATTGGAAATATTATGTGATTCCTTTGCTTATCAGATTCATATTCATGGTTTTTTTCAT GGTGATCCTCAGCCAAGTAATATTTTAGTGGTTTATGATGAACTAAAGAGAAAATACATT CCAGCAATTTTGGATTGGGGAATGGTTAAGATTTTTGATAAAAGTAAACAAATTGCATTT TCAAAGTAA
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  • Fasta :-

  • title: putative ATP binding site
  • coordinates: L139,S140,E141,G142,E143,V146,Q156,T158,G217,M237,E238,Y239,I240,D282,S286,N287,L289,L304,D305
No Results
No Results
IDSitePeptideScoreMethod
cgd5_2400195 SSSAYSELDF0.995unsp

cgd5_2400      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India