cgd5_3940 | Aspartic peptidase domain containing protein

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_IDPredictionOTHERSPmTPCS_Position
cgd5_3940SP0.0009290.9990660.000004CS pos: 17-18. AKS-QK. Pr: 0.8183
No Results

  • Fasta :-

    >cgd5_3940 MNATLFFLILFLVYAKSQKPIKNEIELRENENIKIPVFLDNFSNKLGLDLVIGKKTVRLV IDTLNEGIRLFQDGTEACNKGKLSYSFRSGTGFEDDSEISRIGKSQSNNDSCYDPLSSDS ASWCYNKDHCRISYYMDSYTCEKKKEFPDTRENGIFNAFFHSNERVYDGISKFEVMLEGN ELVIIPWMVPELVLQEFPIKLIKSDLSTGNGENWPSFHNFDGFIGLVGSSMSCRGISIWN DILMLYNASRVYFDVNFENPNSSFLYLNNLPEYWDPISIYWSEPKQSGFVYDDALSLFQI YNFEICGSNIMENISSNWLAALDLSSTCLSLPPFLFARLMSWLPLDCPEYSINNDKLELD KSKENYSQNNELLPYSSLCIVKKKPLPVISFWLSQTDSNDGKVEPIKIFLDDYIIHFNNI DYLCVINSTLGTFGKINYIPYSEGNSYNYFTPYYSSSNTPLILLGSLFLKSYGIVIDNNS GKVGFYPKYKYKGYNSNTIEHSVNSNCAPKKECLLENGFKYDSSINECIPPNCSDWLLYE FNTETNTCELNSIFPLVLAFIIVLFTFFEIHIMYLKQYILDRSSEISNS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd5_3940.fa Sequence name : cgd5_3940 Sequence length : 589 VALUES OF COMPUTED PARAMETERS Coef20 : 4.302 CoefTot : -0.290 ChDiff : -23 ZoneTo : 23 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.624 2.706 0.469 0.954 MesoH : -0.066 0.450 -0.246 0.315 MuHd_075 : 14.480 10.082 3.676 3.314 MuHd_095 : 20.332 13.591 7.454 4.341 MuHd_100 : 24.587 11.933 7.578 4.997 MuHd_105 : 24.720 8.511 7.241 4.533 Hmax_075 : 6.800 14.400 2.920 4.220 Hmax_095 : 15.700 18.813 3.208 6.280 Hmax_100 : 15.800 17.400 3.143 6.140 Hmax_105 : 15.400 13.767 2.267 5.810 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9823 0.0177 DFMC : 0.9654 0.0346
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 589 cgd5_3940 MNATLFFLILFLVYAKSQKPIKNEIELRENENIKIPVFLDNFSNKLGLDLVIGKKTVRLVIDTLNEGIRLFQDGTEACNK 80 GKLSYSFRSGTGFEDDSEISRIGKSQSNNDSCYDPLSSDSASWCYNKDHCRISYYMDSYTCEKKKEFPDTRENGIFNAFF 160 HSNERVYDGISKFEVMLEGNELVIIPWMVPELVLQEFPIKLIKSDLSTGNGENWPSFHNFDGFIGLVGSSMSCRGISIWN 240 DILMLYNASRVYFDVNFENPNSSFLYLNNLPEYWDPISIYWSEPKQSGFVYDDALSLFQIYNFEICGSNIMENISSNWLA 320 ALDLSSTCLSLPPFLFARLMSWLPLDCPEYSINNDKLELDKSKENYSQNNELLPYSSLCIVKKKPLPVISFWLSQTDSND 400 GKVEPIKIFLDDYIIHFNNIDYLCVINSTLGTFGKINYIPYSEGNSYNYFTPYYSSSNTPLILLGSLFLKSYGIVIDNNS 480 GKVGFYPKYKYKGYNSNTIEHSVNSNCAPKKECLLENGFKYDSSINECIPPNCSDWLLYEFNTETNTCELNSIFPLVLAF 560 IIVLFTFFEIHIMYLKQYILDRSSEISNS 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd5_3940 16 LFLVYAK|SQ 0.070 . cgd5_3940 19 VYAKSQK|PI 0.066 . cgd5_3940 22 KSQKPIK|NE 0.065 . cgd5_3940 28 KNEIELR|EN 0.088 . cgd5_3940 34 RENENIK|IP 0.057 . cgd5_3940 45 LDNFSNK|LG 0.065 . cgd5_3940 54 LDLVIGK|KT 0.058 . cgd5_3940 55 DLVIGKK|TV 0.111 . cgd5_3940 58 IGKKTVR|LV 0.117 . cgd5_3940 69 TLNEGIR|LF 0.102 . cgd5_3940 80 GTEACNK|GK 0.055 . cgd5_3940 82 EACNKGK|LS 0.067 . cgd5_3940 88 KLSYSFR|SG 0.239 . cgd5_3940 101 DDSEISR|IG 0.076 . cgd5_3940 104 EISRIGK|SQ 0.223 . cgd5_3940 127 ASWCYNK|DH 0.065 . cgd5_3940 131 YNKDHCR|IS 0.085 . cgd5_3940 143 DSYTCEK|KK 0.055 . cgd5_3940 144 SYTCEKK|KE 0.076 . cgd5_3940 145 YTCEKKK|EF 0.101 . cgd5_3940 151 KEFPDTR|EN 0.093 . cgd5_3940 165 FFHSNER|VY 0.075 . cgd5_3940 172 VYDGISK|FE 0.058 . cgd5_3940 200 LQEFPIK|LI 0.066 . cgd5_3940 203 FPIKLIK|SD 0.072 . cgd5_3940 234 GSSMSCR|GI 0.197 . cgd5_3940 250 MLYNASR|VY 0.097 . cgd5_3940 285 IYWSEPK|QS 0.073 . cgd5_3940 338 PPFLFAR|LM 0.097 . cgd5_3940 356 YSINNDK|LE 0.056 . cgd5_3940 361 DKLELDK|SK 0.066 . cgd5_3940 363 LELDKSK|EN 0.066 . cgd5_3940 382 SSLCIVK|KK 0.055 . cgd5_3940 383 SLCIVKK|KP 0.100 . cgd5_3940 384 LCIVKKK|PL 0.114 . cgd5_3940 402 TDSNDGK|VE 0.064 . cgd5_3940 407 GKVEPIK|IF 0.060 . cgd5_3940 435 TLGTFGK|IN 0.065 . cgd5_3940 470 LGSLFLK|SY 0.117 . cgd5_3940 482 IDNNSGK|VG 0.060 . cgd5_3940 488 KVGFYPK|YK 0.075 . cgd5_3940 490 GFYPKYK|YK 0.086 . cgd5_3940 492 YPKYKYK|GY 0.075 . cgd5_3940 510 NSNCAPK|KE 0.067 . cgd5_3940 511 SNCAPKK|EC 0.089 . cgd5_3940 520 LLENGFK|YD 0.071 . cgd5_3940 576 IHIMYLK|QY 0.057 . cgd5_3940 582 KQYILDR|SS 0.145 . ____________________________^_________________

  • Fasta :-

    >cgd5_3940 TTTAAATGTGAAGAAAATCAACAAAAAAATTGATTTATTATTCAATTACTCATAAAATTA AATTAAATTATTTTTAAGCAAATAAATATAAACAACTATTTGGTATAAATAATGCTAAAA GAATTCATTTAATTATATTATATTTTTTTTTAATAAAGAGTACAGATTTTGGATTAATTT TGATGAATGCTACTTTATTTTTTTTAATATTATTTTTAGTTTATGCAAAGTCACAAAAGC CTATTAAAAACGAAATCGAACTACGAGAAAATGAAAACATAAAGATACCCGTATTTCTTG ATAATTTCAGTAATAAGTTGGGATTGGATTTGGTTATAGGAAAAAAAACTGTTCGATTGG TTATTGATACATTGAATGAAGGAATTCGACTATTTCAAGATGGTACAGAAGCTTGCAATA AAGGCAAGTTAAGTTACTCATTTAGAAGTGGAACCGGGTTTGAAGACGATAGTGAAATTA GTAGGATTGGGAAATCTCAATCGAATAATGATAGTTGTTATGATCCGCTTTCATCAGACT CAGCTTCTTGGTGTTATAATAAGGATCACTGCAGAATTAGTTATTATATGGATTCTTATA CATGTGAAAAGAAAAAGGAATTTCCAGATACTAGAGAAAATGGGATTTTTAATGCTTTTT TTCATTCAAATGAAAGGGTTTATGATGGTATAAGTAAATTTGAAGTAATGCTAGAAGGAA ATGAGCTTGTGATAATTCCATGGATGGTTCCAGAATTGGTTTTACAAGAATTTCCAATTA AACTTATAAAGAGTGATTTATCTACAGGAAATGGAGAAAATTGGCCATCTTTTCACAATT TTGATGGATTTATTGGTCTAGTAGGTTCATCAATGTCATGCAGAGGTATATCTATTTGGA ATGATATATTAATGTTATATAACGCATCAAGAGTTTATTTTGATGTAAATTTTGAAAATC CAAATTCATCTTTTCTTTATTTAAATAACTTACCAGAATATTGGGATCCTATCTCAATTT ATTGGAGCGAGCCAAAACAATCTGGATTTGTTTATGATGATGCTCTAAGTCTATTTCAAA TCTACAATTTTGAGATATGTGGTTCAAACATTATGGAAAATATCTCTTCAAATTGGCTTG CTGCTTTGGACTTATCATCAACTTGTTTATCTTTACCTCCCTTTTTATTCGCAAGATTAA TGTCATGGTTACCTTTGGATTGTCCCGAATATAGTATTAATAATGATAAACTCGAGCTTG ATAAATCAAAGGAAAATTATTCACAAAATAATGAATTACTTCCATATTCATCTTTATGCA TTGTTAAAAAGAAGCCTCTCCCTGTTATATCTTTTTGGTTAAGTCAAACTGATTCAAATG ATGGTAAAGTTGAGCCTATAAAGATCTTTTTGGATGATTATATTATTCATTTTAATAATA TTGACTATCTATGTGTAATTAATTCAACACTAGGTACTTTTGGAAAAATTAATTACATAC CTTACAGTGAAGGTAATAGTTATAACTACTTTACTCCTTATTATTCATCCTCTAATACTC CTTTGATACTCCTTGGTTCTCTTTTTCTCAAATCATATGGTATTGTAATTGATAACAACT CAGGAAAAGTTGGATTTTATCCAAAATATAAATACAAGGGTTATAATTCTAACACTATTG AACACTCTGTGAATTCAAACTGTGCTCCTAAAAAAGAGTGTCTATTAGAAAATGGATTTA AATATGATTCATCTATTAATGAATGCATCCCTCCAAATTGCTCAGACTGGCTCCTTTACG AGTTTAATACTGAAACTAATACATGTGAGCTAAACTCAATATTTCCTCTCGTTCTCGCAT TTATAATCGTTCTATTTACTTTCTTTGAAATACATATAATGTACCTAAAACAATATATTC TTGACAGATCTAGTGAAATTTCTAATTCATGAATAACCTAATACTAGTTCAAATGTTATA AGGC
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  • Fasta :-

    MNATLFFLILFLVYAKSQKPIKNEIELRENENIKIPVFLDNFSNKLGLDLVIGKKTVRLV IDTLNEGIRLFQDGTEACNKGKLSYSFRSGTGFEDDSEISRIGKSQSNNDSCYDPLSSDS ASWCYNKDHCRISYYMDSYTCEKKKEFPDTRENGIFNAFFHSNERVYDGISKFEVMLEGN ELVIIPWMVPELVLQEFPIKLIKSDLSTGNGENWPSFHNFDGFIGLVGSSMSCRGISIWN DILMLYNASRVYFDVNFENPNSSFLYLNNLPEYWDPISIYWSEPKQSGFVYDDALSLFQI YNFEICGSNIMENISSNWLAALDLSSTCLSLPPFLFARLMSWLPLDCPEYSINNDKLELD KSKENYSQNNELLPYSSLCIVKKKPLPVISFWLSQTDSNDGKVEPIKIFLDDYIIHFNNI DYLCVINSTLGTFGKINYIPYSEGNSYNYFTPYYSSSNTPLILLGSLFLKSYGIVIDNNS GKVGFYPKYKYKGYNSNTIEHSVNSNCAPKKECLLENGFKYDSSINECIPPNCSDWLLYE FNTETNTCELNSIFPLVLAFIIVLFTFFEIHIMYLKQYILDRSSEISNS

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd5_3940207 SKSDLSTGNG0.996unspcgd5_3940584 SLDRSSEISN0.994unsp

cgd5_3940      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India