cgd6_2750 | OTU-like cysteine protease

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
cgd6_2750OTHER0.9999290.0000220.000048
No Results

  • Fasta :-

    >cgd6_2750 MREECLLPYEVRVKNIEGDGNCLFRSIGSQLYGESEHHEIIRSACMDYVDLNKESFSGFV HEYSSIEKYIQEKRKLGVWADNIEVQALSDLYRIPIYIFEKVRNSKLNASLLEKHRLEGF SGTMSENIFYENKEFVYKLLCKIEPRHSSFLDQIKNYYSNSRPIRLLYYNDLHYDSLFYR REHQTPIINKDIGIIEAESIKNLKVYRAIAKQKEKSSKFPVRGSKIKTDQVGHFNHTSYA LLRKKAIKKFPVNYGSSSESDNYVAKSPFFLSVKNKYRDEPESFFEGNYLDKISEGETHF EKLHPKSKEPHSKFISGPKSFSERAIGKPACVSKIKSLNNTHLGVVDRYARDVQLSSHQK EFKKLLINDSPRLSSTPNPRKKCVAIYCPQILKQSAFRN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd6_2750.fa Sequence name : cgd6_2750 Sequence length : 399 VALUES OF COMPUTED PARAMETERS Coef20 : 3.132 CoefTot : 0.135 ChDiff : 17 ZoneTo : 2 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.394 0.847 -0.241 0.364 MesoH : -1.685 -0.187 -0.660 0.046 MuHd_075 : 19.130 15.845 5.167 2.770 MuHd_095 : 15.696 7.431 5.713 1.544 MuHd_100 : 14.789 6.587 5.813 0.528 MuHd_105 : 6.942 5.225 4.333 1.986 Hmax_075 : -2.567 6.300 -1.335 1.878 Hmax_095 : -6.388 6.650 -1.155 1.356 Hmax_100 : -3.400 5.700 -1.456 1.920 Hmax_105 : -7.400 4.700 -1.763 1.640 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9894 0.0106 DFMC : 0.9918 0.0082
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 399 cgd6_2750 MREECLLPYEVRVKNIEGDGNCLFRSIGSQLYGESEHHEIIRSACMDYVDLNKESFSGFVHEYSSIEKYIQEKRKLGVWA 80 DNIEVQALSDLYRIPIYIFEKVRNSKLNASLLEKHRLEGFSGTMSENIFYENKEFVYKLLCKIEPRHSSFLDQIKNYYSN 160 SRPIRLLYYNDLHYDSLFYRREHQTPIINKDIGIIEAESIKNLKVYRAIAKQKEKSSKFPVRGSKIKTDQVGHFNHTSYA 240 LLRKKAIKKFPVNYGSSSESDNYVAKSPFFLSVKNKYRDEPESFFEGNYLDKISEGETHFEKLHPKSKEPHSKFISGPKS 320 FSERAIGKPACVSKIKSLNNTHLGVVDRYARDVQLSSHQKEFKKLLINDSPRLSSTPNPRKKCVAIYCPQILKQSAFRN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >cgd6_2750 ATGAGAGAGGAATGCTTGCTTCCATATGAAGTGAGAGTGAAAAATATTGAAGGAGATGGT AACTGTTTGTTTAGGTCTATAGGAAGCCAGCTTTACGGGGAGAGTGAACACCATGAAATA ATTAGATCTGCCTGCATGGATTACGTAGATTTAAACAAGGAATCATTTTCTGGATTTGTA CATGAATATTCTTCAATTGAAAAATATATTCAAGAGAAGAGAAAACTGGGGGTCTGGGCT GATAATATTGAAGTTCAAGCACTAAGTGACCTGTATCGTATTCCAATATATATATTTGAA AAGGTCAGAAATAGTAAACTGAATGCTAGCTTATTAGAGAAGCATAGACTAGAAGGCTTT TCTGGTACTATGTCAGAAAATATTTTCTATGAGAACAAGGAATTTGTTTATAAGTTACTT TGTAAGATAGAGCCAAGGCATTCAAGTTTCCTTGACCAGATTAAGAATTATTATTCAAAT AGTAGGCCAATTCGATTGCTTTATTACAATGACTTACATTATGACTCTTTATTTTATAGA AGAGAGCATCAAACCCCAATAATTAACAAGGATATTGGAATAATTGAGGCTGAGAGCATT AAGAACCTTAAAGTTTACAGAGCCATTGCAAAACAAAAAGAAAAAAGTAGTAAGTTTCCT GTTAGAGGCTCTAAAATAAAAACCGACCAGGTCGGTCATTTTAATCATACATCATATGCA CTACTAAGGAAGAAGGCAATTAAAAAGTTCCCTGTTAATTATGGATCTAGCAGTGAAAGT GACAACTATGTCGCAAAATCGCCATTTTTCCTATCCGTTAAGAATAAATACCGAGACGAA CCCGAATCATTTTTCGAGGGGAATTACCTAGATAAAATCTCTGAGGGTGAAACTCATTTT GAAAAGCTTCACCCCAAGAGCAAAGAGCCACATAGCAAGTTTATATCTGGGCCCAAATCA TTTTCCGAAAGGGCAATAGGAAAGCCCGCCTGTGTTTCAAAAATTAAGTCATTAAATAAT ACTCATTTGGGAGTAGTTGATAGATACGCCAGGGATGTTCAACTCTCTTCTCATCAAAAG GAATTTAAAAAGCTGTTGATTAACGATTCACCTCGATTGTCTTCAACCCCAAATCCAAGA AAAAAGTGTGTTGCAATATATTGTCCACAAATTTTGAAACAAAGTGCGTTTAGAAATTAA
  • Download Fasta

  • Fasta :-

    MREECLLPYEVRVKNIEGDGNCLFRSIGSQLYGESEHHEIIRSACMDYVDLNKESFSGFV HEYSSIEKYIQEKRKLGVWADNIEVQALSDLYRIPIYIFEKVRNSKLNASLLEKHRLEGF SGTMSENIFYENKEFVYKLLCKIEPRHSSFLDQIKNYYSNSRPIRLLYYNDLHYDSLFYR REHQTPIINKDIGIIEAESIKNLKVYRAIAKQKEKSSKFPVRGSKIKTDQVGHFNHTSYA LLRKKAIKKFPVNYGSSSESDNYVAKSPFFLSVKNKYRDEPESFFEGNYLDKISEGETHF EKLHPKSKEPHSKFISGPKSFSERAIGKPACVSKIKSLNNTHLGVVDRYARDVQLSSHQK EFKKLLINDSPRLSSTPNPRKKCVAIYCPQILKQSAFRN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd6_2750224 SPVRGSKIKT0.992unspcgd6_2750224 SPVRGSKIKT0.992unspcgd6_2750224 SPVRGSKIKT0.992unspcgd6_2750258 SYGSSSESDN0.994unspcgd6_2750307 SLHPKSKEPH0.994unspcgd6_2750320 SSGPKSFSER0.993unspcgd6_2750374 SSPRLSSTPN0.993unspcgd6_2750199 SIEAESIKNL0.995unspcgd6_2750216 SQKEKSSKFP0.996unsp

cgd6_2750      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India