cgd6_660 | Secreted pepsinogen like aspartyl protease

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  • Computed_GO_Process_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
cgd6_660SP0.4863070.5133860.000307CS pos: 25-26. TEK-LT. Pr: 0.4930
No Results

  • Fasta :-

    >cgd6_660 MGTISSIINYLLLLIAILNIKQTEKLTLINSSNKIINHINLLKNDEIFEVSGNLTNEDVY KWATSYRDYEQDSEHDHENDYDADIEDNIDDDDDDYDDDDHHHHRDRIHNNKYEDHNQYQ NSLSLNKSKLIYSDSESFLINPKLKNIYDFSNNKQIYKTINVLNVNGEIIPYDVFITNIT IPLFEVKNSLFVCRIRIGEPEQEFWPIIDTGSSNLWVIGEECNQSSCQKVKRYSKYISKS FKRISKYDNISVIFGTGKIYGKLILETLKFDNFQLNKHVIGIIEQVENTENSKIDIFDAI ELEGVLGLGFTQMSSSKKLQLPLIERLQSQGLIQNNIFSIYINDYRIKPINNNDKLSKPC AILLLGGIDQNLFEEELHILPVIREHYWQVELESLYIGDTKYCCDYGSLAYEWENLENEH LYKKFGHYEDPPMDVYIYKTFNKSIDKTNRTPGYVIFDSGTSFYTLPNFEYNHFIKEYQP FGDCSQIHLDSKKIDPKIIQHFPNITYTFKDGFQLVIPPELYLTPNEQGKCKPGIMMIDV PGEYGHSYLLGSLFMRSYYTVYAKNIPKIGSAVGIAKAKHNKDTRKYIYSKLSSINETFV PPDDDEAELYWTQINGRLSENWKFPPILGNLFF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd6_660.fa Sequence name : cgd6_660 Sequence length : 633 VALUES OF COMPUTED PARAMETERS Coef20 : 4.552 CoefTot : -0.737 ChDiff : -27 ZoneTo : 44 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.741 2.229 0.335 0.756 MesoH : -0.484 0.258 -0.380 0.238 MuHd_075 : 26.981 17.176 8.068 4.664 MuHd_095 : 23.673 20.391 8.873 5.664 MuHd_100 : 28.722 25.465 10.180 6.707 MuHd_105 : 36.682 31.944 12.935 8.851 Hmax_075 : 2.450 24.200 0.998 7.450 Hmax_095 : 14.500 12.200 0.856 4.200 Hmax_100 : 10.600 17.100 1.392 5.020 Hmax_105 : 18.600 24.800 5.011 7.620 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9318 0.0682 DFMC : 0.8864 0.1136
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 633 cgd6_660 MGTISSIINYLLLLIAILNIKQTEKLTLINSSNKIINHINLLKNDEIFEVSGNLTNEDVYKWATSYRDYEQDSEHDHEND 80 YDADIEDNIDDDDDDYDDDDHHHHRDRIHNNKYEDHNQYQNSLSLNKSKLIYSDSESFLINPKLKNIYDFSNNKQIYKTI 160 NVLNVNGEIIPYDVFITNITIPLFEVKNSLFVCRIRIGEPEQEFWPIIDTGSSNLWVIGEECNQSSCQKVKRYSKYISKS 240 FKRISKYDNISVIFGTGKIYGKLILETLKFDNFQLNKHVIGIIEQVENTENSKIDIFDAIELEGVLGLGFTQMSSSKKLQ 320 LPLIERLQSQGLIQNNIFSIYINDYRIKPINNNDKLSKPCAILLLGGIDQNLFEEELHILPVIREHYWQVELESLYIGDT 400 KYCCDYGSLAYEWENLENEHLYKKFGHYEDPPMDVYIYKTFNKSIDKTNRTPGYVIFDSGTSFYTLPNFEYNHFIKEYQP 480 FGDCSQIHLDSKKIDPKIIQHFPNITYTFKDGFQLVIPPELYLTPNEQGKCKPGIMMIDVPGEYGHSYLLGSLFMRSYYT 560 VYAKNIPKIGSAVGIAKAKHNKDTRKYIYSKLSSINETFVPPDDDEAELYWTQINGRLSENWKFPPILGNLFF 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ......................................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd6_660 21 IAILNIK|QT 0.062 . cgd6_660 25 NIKQTEK|LT 0.055 . cgd6_660 34 LINSSNK|II 0.069 . cgd6_660 43 NHINLLK|ND 0.066 . cgd6_660 61 TNEDVYK|WA 0.087 . cgd6_660 67 KWATSYR|DY 0.160 . cgd6_660 105 DDHHHHR|DR 0.127 . cgd6_660 107 HHHHRDR|IH 0.099 . cgd6_660 112 DRIHNNK|YE 0.077 . cgd6_660 127 NSLSLNK|SK 0.064 . cgd6_660 129 LSLNKSK|LI 0.067 . cgd6_660 143 SFLINPK|LK 0.055 . cgd6_660 145 LINPKLK|NI 0.073 . cgd6_660 154 YDFSNNK|QI 0.063 . cgd6_660 158 NNKQIYK|TI 0.063 . cgd6_660 187 IPLFEVK|NS 0.056 . cgd6_660 194 NSLFVCR|IR 0.099 . cgd6_660 196 LFVCRIR|IG 0.089 . cgd6_660 229 NQSSCQK|VK 0.062 . cgd6_660 231 SSCQKVK|RY 0.084 . cgd6_660 232 SCQKVKR|YS 0.272 . cgd6_660 235 KVKRYSK|YI 0.218 . cgd6_660 239 YSKYISK|SF 0.070 . cgd6_660 242 YISKSFK|RI 0.095 . cgd6_660 243 ISKSFKR|IS 0.150 . cgd6_660 246 SFKRISK|YD 0.120 . cgd6_660 258 VIFGTGK|IY 0.068 . cgd6_660 262 TGKIYGK|LI 0.061 . cgd6_660 269 LILETLK|FD 0.060 . cgd6_660 277 DNFQLNK|HV 0.085 . cgd6_660 293 ENTENSK|ID 0.053 . cgd6_660 317 TQMSSSK|KL 0.061 . cgd6_660 318 QMSSSKK|LQ 0.097 . cgd6_660 326 QLPLIER|LQ 0.086 . cgd6_660 346 IYINDYR|IK 0.072 . cgd6_660 348 INDYRIK|PI 0.066 . cgd6_660 355 PINNNDK|LS 0.060 . cgd6_660 358 NNDKLSK|PC 0.064 . cgd6_660 384 HILPVIR|EH 0.088 . cgd6_660 401 LYIGDTK|YC 0.067 . cgd6_660 423 ENEHLYK|KF 0.079 . cgd6_660 424 NEHLYKK|FG 0.102 . cgd6_660 439 MDVYIYK|TF 0.072 . cgd6_660 443 IYKTFNK|SI 0.105 . cgd6_660 447 FNKSIDK|TN 0.057 . cgd6_660 450 SIDKTNR|TP 0.109 . cgd6_660 476 EYNHFIK|EY 0.075 . cgd6_660 492 QIHLDSK|KI 0.075 . cgd6_660 493 IHLDSKK|ID 0.108 . cgd6_660 497 SKKIDPK|II 0.070 . cgd6_660 510 NITYTFK|DG 0.065 . cgd6_660 530 TPNEQGK|CK 0.078 . cgd6_660 532 NEQGKCK|PG 0.069 . cgd6_660 556 LGSLFMR|SY 0.168 . cgd6_660 564 YYTVYAK|NI 0.067 . cgd6_660 568 YAKNIPK|IG 0.070 . cgd6_660 577 SAVGIAK|AK 0.069 . cgd6_660 579 VGIAKAK|HN 0.072 . cgd6_660 582 AKAKHNK|DT 0.103 . cgd6_660 585 KHNKDTR|KY 0.095 . cgd6_660 586 HNKDTRK|YI 0.133 . cgd6_660 591 RKYIYSK|LS 0.076 . cgd6_660 617 WTQINGR|LS 0.078 . cgd6_660 623 RLSENWK|FP 0.070 . ____________________________^_________________

  • Fasta :-

    >cgd6_660 ATGGGTACCATTTCATCAATAATTAATTATTTATTACTATTAATAGCCATTTTGAATATT AAACAAACAGAAAAATTAACTTTAATAAATTCCTCCAATAAAATTATTAACCATATAAAC TTATTGAAAAATGATGAAATTTTTGAAGTTTCTGGTAACTTGACCAATGAAGATGTATAT AAATGGGCAACATCTTATCGTGATTATGAACAAGATTCAGAACATGATCATGAAAATGAC TATGATGCTGATATTGAAGATAACATTGATGATGATGATGATGATTATGATGATGATGAT CATCATCATCATCGTGATCGTATTCATAATAACAAATATGAAGATCATAACCAGTACCAA AACTCTCTTAGTTTAAATAAATCAAAACTTATATACTCAGACTCCGAATCTTTCCTAATT AACCCAAAATTAAAGAATATTTATGATTTTTCAAATAATAAACAAATTTATAAAACCATT AATGTATTAAATGTGAATGGAGAAATTATACCATATGATGTTTTTATCACTAATATTACC ATACCACTCTTTGAAGTGAAAAATTCACTTTTTGTATGTAGAATTAGAATTGGTGAACCT GAACAAGAATTTTGGCCTATTATTGATACTGGAAGCAGTAATCTTTGGGTTATTGGAGAA GAATGTAACCAATCAAGTTGTCAAAAAGTTAAAAGATATTCGAAATATATTTCAAAATCA TTTAAAAGAATTTCCAAATATGATAATATTTCAGTAATTTTTGGTACTGGTAAAATTTAT GGTAAATTAATTCTTGAAACACTTAAATTTGATAATTTCCAACTTAATAAACATGTTATT GGAATTATTGAACAAGTGGAAAATACTGAAAATAGCAAAATTGATATATTTGATGCAATC GAACTTGAAGGTGTACTTGGACTTGGATTTACACAAATGTCTTCTTCAAAAAAACTTCAA CTACCTTTAATTGAAAGACTTCAAAGTCAAGGACTTATTCAAAATAATATATTTTCTATA TATATTAATGATTATAGAATTAAACCAATTAATAATAATGATAAACTTTCAAAACCTTGT GCTATTTTATTACTTGGTGGAATTGATCAAAATCTATTTGAAGAAGAACTTCATATTCTT CCAGTTATTAGAGAACATTATTGGCAAGTTGAATTAGAATCACTTTATATTGGAGATACA AAATATTGTTGTGACTATGGATCTCTTGCTTATGAATGGGAAAATCTTGAAAATGAACAT TTATATAAAAAATTTGGACATTACGAAGATCCTCCAATGGATGTTTATATTTACAAAACT TTCAATAAAAGTATTGATAAAACTAATAGAACTCCTGGATATGTTATTTTTGATTCCGGT ACTTCTTTTTATACATTACCCAATTTTGAATATAATCATTTTATTAAAGAATATCAACCT TTTGGTGATTGTTCTCAAATTCATTTAGATTCTAAAAAGATTGATCCAAAAATCATTCAA CATTTTCCTAATATTACTTATACTTTTAAAGATGGATTTCAACTTGTTATTCCACCTGAG CTTTATTTAACTCCAAATGAACAAGGAAAATGTAAACCTGGTATAATGATGATTGATGTA CCAGGTGAATATGGACATTCATATTTACTTGGTTCATTATTTATGAGATCTTATTATACT GTTTATGCAAAAAATATCCCCAAGATTGGTTCAGCTGTTGGTATTGCCAAAGCTAAACAT AATAAAGATACCAGAAAATATATTTATAGTAAACTTTCTTCGATTAATGAAACATTTGTA CCTCCTGATGATGATGAAGCTGAATTATATTGGACTCAAATTAATGGAAGATTGTCAGAA AATTGGAAATTTCCTCCAATTTTAGGTAATTTATTCTTTTAA
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  • Fasta :-

    MGTISSIINYLLLLIAILNIKQTEKLTLINSSNKIINHINLLKNDEIFEVSGNLTNEDVY KWATSYRDYEQDSEHDHENDYDADIEDNIDDDDDDYDDDDHHHHRDRIHNNKYEDHNQYQ NSLSLNKSKLIYSDSESFLINPKLKNIYDFSNNKQIYKTINVLNVNGEIIPYDVFITNIT IPLFEVKNSLFVCRIRIGEPEQEFWPIIDTGSSNLWVIGEECNQSSCQKVKRYSKYISKS FKRISKYDNISVIFGTGKIYGKLILETLKFDNFQLNKHVIGIIEQVENTENSKIDIFDAI ELEGVLGLGFTQMSSSKKLQLPLIERLQSQGLIQNNIFSIYINDYRIKPINNNDKLSKPC AILLLGGIDQNLFEEELHILPVIREHYWQVELESLYIGDTKYCCDYGSLAYEWENLENEH LYKKFGHYEDPPMDVYIYKTFNKSIDKTNRTPGYVIFDSGTSFYTLPNFEYNHFIKEYQP FGDCSQIHLDSKKIDPKIIQHFPNITYTFKDGFQLVIPPELYLTPNEQGKCKPGIMMIDV PGEYGHSYLLGSLFMRSYYTVYAKNIPKIGSAVGIAKAKHNKDTRKYIYSKLSSINETFV PPDDDEAELYWTQINGRLSENWKFPPILGNLFF

  • title: catalytic residue
  • coordinates: D209,D458
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd6_66096 YDDDDYDDDD0.991unspcgd6_66096 YDDDDYDDDD0.991unspcgd6_66096 YDDDDYDDDD0.991unspcgd6_660234 SVKRYSKYIS0.994unspcgd6_660240 SYISKSFKRI0.991unspcgd6_660245 SFKRISKYDN0.998unspcgd6_660292 SNTENSKIDI0.991unspcgd6_66065 SKWATSYRDY0.997unspcgd6_66073 SYEQDSEHDH0.998unsp

cgd6_660      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India