cgd6_900 | Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2

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_IDPredictionOTHERSPmTPCS_Position
cgd6_900OTHER0.9997210.0002740.000005
No Results

  • Fasta :-

    >cgd6_900 MSIINELENFDIYILDSLLNNLNRLEIAQDEIGESINAKYFAIGYYKKNRISNRNIVIIS DVVKLNCLDWDKSITEFIEDIIISLPEGFTILGSIQSKSDCSEWINIIKVDYKKHNNKYG KFWNPNDFPNLVIVPDFNILSVISSLKIFLINQNANYLIPDSRIKMIKDLSEIGQFYSCE IHISLPILSTNSHESNQIDSNISSIEEIIESNLVVQTPNSLNNNYHQFLNIYNYNKNYKF INKDLNSFPIQIPVFFSQNIQHIESNSNENSNSHFFTSYTITNNDEKSFQKINLHLQACI FKLKDNDELMSFQNTIKKCFINQCNYIKERVNNPTRLFYYSQLYSSSTTFSDNYEFEFYL FKVSHISFPITLLNTGILFENNSDKKALRKLWSNILNIYPLIPSITKNLALIPKPKNEPE NIKYYHDKLVSPHLFLIEQMKLKNSKIKDKKTNFDLNKNKTDSEEFINNGLDLDLDQDLE LDFDGNFDLNLDPNYPRKQKLKLPIIYQCYGDFYYYHYNHDNFKDIGWGCTYRSLQMVFS WYLINNYTNKHILTIPEIQDFLRKNDPTHSNLEIGSKIWIGTVEASYLLMMYLGISCKLK YFYDIEEFLKDYNTISDHFQNVSTPIILSIGDYSYLLVAIQISKDPSSPFNPNNVQYLLV DPHYTGKDDPESIYKKNGVSWKNASFFKSISKDKYVNILLPLNISEKDSQIIY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd6_900.fa Sequence name : cgd6_900 Sequence length : 713 VALUES OF COMPUTED PARAMETERS Coef20 : 3.726 CoefTot : -0.022 ChDiff : -13 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.429 1.665 0.180 0.642 MesoH : -0.371 0.442 -0.326 0.296 MuHd_075 : 16.958 10.499 5.002 3.444 MuHd_095 : 20.614 23.643 7.364 5.937 MuHd_100 : 24.576 25.614 8.248 6.639 MuHd_105 : 23.612 21.377 7.286 5.691 Hmax_075 : 3.967 11.700 0.589 4.640 Hmax_095 : 9.100 21.400 2.479 6.600 Hmax_100 : 9.400 21.400 2.479 6.700 Hmax_105 : 19.133 22.517 4.485 7.373 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9281 0.0719 DFMC : 0.9747 0.0253
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 713 cgd6_900 MSIINELENFDIYILDSLLNNLNRLEIAQDEIGESINAKYFAIGYYKKNRISNRNIVIISDVVKLNCLDWDKSITEFIED 80 IIISLPEGFTILGSIQSKSDCSEWINIIKVDYKKHNNKYGKFWNPNDFPNLVIVPDFNILSVISSLKIFLINQNANYLIP 160 DSRIKMIKDLSEIGQFYSCEIHISLPILSTNSHESNQIDSNISSIEEIIESNLVVQTPNSLNNNYHQFLNIYNYNKNYKF 240 INKDLNSFPIQIPVFFSQNIQHIESNSNENSNSHFFTSYTITNNDEKSFQKINLHLQACIFKLKDNDELMSFQNTIKKCF 320 INQCNYIKERVNNPTRLFYYSQLYSSSTTFSDNYEFEFYLFKVSHISFPITLLNTGILFENNSDKKALRKLWSNILNIYP 400 LIPSITKNLALIPKPKNEPENIKYYHDKLVSPHLFLIEQMKLKNSKIKDKKTNFDLNKNKTDSEEFINNGLDLDLDQDLE 480 LDFDGNFDLNLDPNYPRKQKLKLPIIYQCYGDFYYYHYNHDNFKDIGWGCTYRSLQMVFSWYLINNYTNKHILTIPEIQD 560 FLRKNDPTHSNLEIGSKIWIGTVEASYLLMMYLGISCKLKYFYDIEEFLKDYNTISDHFQNVSTPIILSIGDYSYLLVAI 640 QISKDPSSPFNPNNVQYLLVDPHYTGKDDPESIYKKNGVSWKNASFFKSISKDKYVNILLPLNISEKDSQIIY 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ......................................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd6_900 24 LLNNLNR|LE 0.088 . cgd6_900 39 GESINAK|YF 0.084 . cgd6_900 47 FAIGYYK|KN 0.061 . cgd6_900 48 AIGYYKK|NR 0.082 . cgd6_900 50 GYYKKNR|IS 0.101 . cgd6_900 54 KNRISNR|NI 0.116 . cgd6_900 64 IISDVVK|LN 0.062 . cgd6_900 72 NCLDWDK|SI 0.072 . cgd6_900 98 LGSIQSK|SD 0.085 . cgd6_900 109 EWINIIK|VD 0.059 . cgd6_900 113 IIKVDYK|KH 0.061 . cgd6_900 114 IKVDYKK|HN 0.107 . cgd6_900 118 YKKHNNK|YG 0.061 . cgd6_900 121 HNNKYGK|FW 0.085 . cgd6_900 147 SVISSLK|IF 0.059 . cgd6_900 163 YLIPDSR|IK 0.083 . cgd6_900 165 IPDSRIK|MI 0.062 . cgd6_900 168 SRIKMIK|DL 0.119 . cgd6_900 236 NIYNYNK|NY 0.059 . cgd6_900 239 NYNKNYK|FI 0.090 . cgd6_900 243 NYKFINK|DL 0.070 . cgd6_900 287 ITNNDEK|SF 0.084 . cgd6_900 291 DEKSFQK|IN 0.059 . cgd6_900 302 LQACIFK|LK 0.068 . cgd6_900 304 ACIFKLK|DN 0.072 . cgd6_900 317 SFQNTIK|KC 0.064 . cgd6_900 318 FQNTIKK|CF 0.098 . cgd6_900 328 NQCNYIK|ER 0.055 . cgd6_900 330 CNYIKER|VN 0.086 . cgd6_900 336 RVNNPTR|LF 0.085 . cgd6_900 362 FEFYLFK|VS 0.059 . cgd6_900 385 FENNSDK|KA 0.076 . cgd6_900 386 ENNSDKK|AL 0.105 . cgd6_900 389 SDKKALR|KL 0.089 . cgd6_900 390 DKKALRK|LW 0.100 . cgd6_900 407 LIPSITK|NL 0.054 . cgd6_900 414 NLALIPK|PK 0.066 . cgd6_900 416 ALIPKPK|NE 0.063 . cgd6_900 423 NEPENIK|YY 0.078 . cgd6_900 428 IKYYHDK|LV 0.134 . cgd6_900 441 FLIEQMK|LK 0.065 . cgd6_900 443 IEQMKLK|NS 0.063 . cgd6_900 446 MKLKNSK|IK 0.068 . cgd6_900 448 LKNSKIK|DK 0.099 . cgd6_900 450 NSKIKDK|KT 0.069 . cgd6_900 451 SKIKDKK|TN 0.104 . cgd6_900 458 TNFDLNK|NK 0.075 . cgd6_900 460 FDLNKNK|TD 0.064 . cgd6_900 497 LDPNYPR|KQ 0.076 . cgd6_900 498 DPNYPRK|QK 0.089 . cgd6_900 500 NYPRKQK|LK 0.114 . cgd6_900 502 PRKQKLK|LP 0.068 . cgd6_900 524 YNHDNFK|DI 0.110 . cgd6_900 533 GWGCTYR|SL 0.166 . cgd6_900 550 INNYTNK|HI 0.077 . cgd6_900 563 EIQDFLR|KN 0.090 . cgd6_900 564 IQDFLRK|ND 0.066 . cgd6_900 577 NLEIGSK|IW 0.061 . cgd6_900 598 YLGISCK|LK 0.057 . cgd6_900 600 GISCKLK|YF 0.109 . cgd6_900 610 DIEEFLK|DY 0.072 . cgd6_900 644 VAIQISK|DP 0.059 . cgd6_900 667 DPHYTGK|DD 0.074 . cgd6_900 675 DPESIYK|KN 0.066 . cgd6_900 676 PESIYKK|NG 0.082 . cgd6_900 682 KNGVSWK|NA 0.081 . cgd6_900 688 KNASFFK|SI 0.115 . cgd6_900 692 FFKSISK|DK 0.062 . cgd6_900 694 KSISKDK|YV 0.099 . cgd6_900 707 PLNISEK|DS 0.073 . ____________________________^_________________

  • Fasta :-

    >cgd6_900 ATGAGTATAATAAATGAACTGGAAAACTTTGATATTTACATATTGGATAGCCTCTTAAAC AACTTGAATAGACTTGAAATTGCTCAAGATGAAATTGGAGAATCAATTAATGCTAAATAT TTTGCAATAGGGTACTATAAGAAAAACAGAATTTCTAATAGAAATATAGTGATAATATCA GATGTTGTTAAACTCAACTGTTTGGATTGGGACAAATCTATTACTGAATTTATTGAAGAT ATAATAATTAGTTTACCTGAAGGATTTACAATTTTAGGTTCAATACAAAGCAAATCAGAT TGTTCAGAATGGATTAATATAATTAAAGTGGATTATAAAAAACATAATAATAAATATGGA AAGTTTTGGAATCCAAATGACTTTCCAAATTTAGTGATTGTTCCAGATTTTAATATTCTT TCAGTTATATCATCATTAAAGATTTTTCTAATAAATCAAAATGCAAATTATTTGATTCCT GATTCAAGAATAAAGATGATTAAGGATCTTTCAGAAATTGGACAATTTTACTCTTGTGAA ATTCATATTTCTTTGCCAATTTTATCTACAAATTCCCACGAAAGTAACCAAATTGATTCA AATATTTCATCTATTGAAGAAATTATTGAATCAAATTTGGTTGTACAAACCCCAAATTCT CTCAATAATAATTATCATCAATTTTTAAATATCTATAATTACAATAAAAATTACAAATTC ATCAACAAAGATTTGAATTCTTTCCCAATACAAATTCCAGTCTTTTTTTCTCAAAATATT CAACATATTGAATCAAATTCGAATGAAAATTCAAATTCTCATTTCTTTACATCCTATACA ATTACTAATAATGATGAGAAATCTTTTCAGAAAATTAACTTACATCTCCAAGCCTGTATC TTTAAGCTCAAGGATAATGATGAGTTAATGTCTTTTCAAAATACGATTAAAAAATGTTTC ATTAACCAATGTAATTACATTAAAGAAAGGGTAAATAATCCAACTCGTCTTTTTTATTAT TCACAACTTTATTCTTCATCAACAACATTTTCAGATAACTATGAATTTGAATTTTATTTA TTCAAAGTTTCCCATATTTCTTTCCCAATAACTCTTCTTAATACTGGAATTCTATTTGAA AATAACTCTGACAAAAAAGCTCTTAGAAAGCTTTGGTCAAATATACTCAATATTTATCCC TTAATACCATCCATTACTAAGAATCTTGCACTAATTCCAAAGCCTAAGAATGAACCAGAA AATATTAAATACTATCACGACAAGCTTGTCTCACCACATTTATTTCTGATTGAACAAATG AAATTAAAAAATTCAAAGATAAAAGACAAAAAAACTAATTTTGATCTAAATAAGAATAAA ACAGACTCGGAAGAATTTATTAATAATGGTTTAGATTTAGATTTAGATCAAGATCTTGAA TTAGATTTTGATGGAAATTTTGATTTGAATTTAGATCCAAATTACCCAAGAAAACAAAAA TTAAAACTACCTATAATTTACCAATGTTATGGAGATTTTTACTATTATCATTATAATCAT GATAATTTCAAAGATATTGGTTGGGGTTGTACTTATAGATCTCTTCAAATGGTATTTAGT TGGTACCTTATTAATAATTATACTAATAAACATATTTTGACAATACCAGAAATTCAAGAT TTCTTAAGAAAAAATGATCCAACACATAGCAACCTTGAAATTGGATCAAAAATTTGGATT GGAACTGTTGAAGCTTCATATCTTTTAATGATGTATCTTGGAATTTCTTGTAAATTAAAA TACTTTTATGATATTGAAGAATTTCTTAAAGATTATAATACAATTTCTGATCATTTTCAA AATGTCTCAACACCAATAATTCTTAGTATTGGAGATTATTCGTATTTATTAGTAGCAATT CAAATTTCAAAAGATCCTTCTTCTCCTTTTAACCCTAATAATGTCCAATATTTGTTGGTA GATCCCCATTATACTGGAAAAGATGATCCTGAATCTATTTATAAAAAAAATGGAGTTTCT TGGAAGAATGCAAGCTTTTTCAAATCTATATCTAAAGATAAATATGTCAATATTTTATTA CCTCTTAATATTTCCGAAAAAGATTCTCAAATTATTTATTAA
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  • Fasta :-

    MSIINELENFDIYILDSLLNNLNRLEIAQDEIGESINAKYFAIGYYKKNRISNRNIVIIS DVVKLNCLDWDKSITEFIEDIIISLPEGFTILGSIQSKSDCSEWINIIKVDYKKHNNKYG KFWNPNDFPNLVIVPDFNILSVISSLKIFLINQNANYLIPDSRIKMIKDLSEIGQFYSCE IHISLPILSTNSHESNQIDSNISSIEEIIESNLVVQTPNSLNNNYHQFLNIYNYNKNYKF INKDLNSFPIQIPVFFSQNIQHIESNSNENSNSHFFTSYTITNNDEKSFQKINLHLQACI FKLKDNDELMSFQNTIKKCFINQCNYIKERVNNPTRLFYYSQLYSSSTTFSDNYEFEFYL FKVSHISFPITLLNTGILFENNSDKKALRKLWSNILNIYPLIPSITKNLALIPKPKNEPE NIKYYHDKLVSPHLFLIEQMKLKNSKIKDKKTNFDLNKNKTDSEEFINNGLDLDLDQDLE LDFDGNFDLNLDPNYPRKQKLKLPIIYQCYGDFYYYHYNHDNFKDIGWGCTYRSLQMVFS WYLINNYTNKHILTIPEIQDFLRKNDPTHSNLEIGSKIWIGTVEASYLLMMYLGISCKLK YFYDIEEFLKDYNTISDHFQNVSTPIILSIGDYSYLLVAIQISKDPSSPFNPNNVQYLLV DPHYTGKDDPESIYKKNGVSWKNASFFKSISKDKYVNILLPLNISEKDSQIIY

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd6_900695 YSKDKYVNIL0.994unspcgd6_900695 YSKDKYVNIL0.994unspcgd6_900695 YSKDKYVNIL0.994unspcgd6_90052 SKNRISNRNI0.992unspcgd6_900680 SKNGVSWKNA0.995unsp

cgd6_900      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India