cgd7_2550 | Serine aminopeptidase S33

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_IDPredictionOTHERSPmTPCS_Position
cgd7_2550OTHER0.9993390.0003480.000313
No Results

  • Fasta :-

    >cgd7_2550 MSNENSSLYPKQFSIHTSDGVKLSCRSFGNIPSKVPMTGIESIVFVLVHPYGIMGGSSSN MLGLALSLADKGYGSIIFDHRGIGKSTGYKSIFGNNEVYDVVSVCNDIKGKNSDIKVVLI GSSAGAPIAGSAVDECENVIGYIGIGYVFGFWPSLLFKQHYNNILRSKKHKLFIMGDSDG FTSIDVLKNKMDNCCDPKQVEIIPKVGHFELESPYYDDTICEIIDKFVKSSFR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd7_2550.fa Sequence name : cgd7_2550 Sequence length : 233 VALUES OF COMPUTED PARAMETERS Coef20 : 3.321 CoefTot : -2.561 ChDiff : -1 ZoneTo : 69 KR : 4 DE : 3 CleavSite : 36 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.788 1.612 0.322 0.770 MesoH : 0.065 0.477 -0.214 0.314 MuHd_075 : 24.685 16.005 7.656 5.544 MuHd_095 : 46.027 24.461 13.001 9.738 MuHd_100 : 43.251 25.630 12.100 9.108 MuHd_105 : 38.764 23.522 11.167 7.129 Hmax_075 : 3.800 17.000 0.462 2.847 Hmax_095 : 12.425 14.788 3.265 6.318 Hmax_100 : 14.400 15.800 4.076 5.220 Hmax_105 : 11.725 20.300 3.914 4.585 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9406 0.0594 DFMC : 0.9361 0.0639
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 233 cgd7_2550 MSNENSSLYPKQFSIHTSDGVKLSCRSFGNIPSKVPMTGIESIVFVLVHPYGIMGGSSSNMLGLALSLADKGYGSIIFDH 80 RGIGKSTGYKSIFGNNEVYDVVSVCNDIKGKNSDIKVVLIGSSAGAPIAGSAVDECENVIGYIGIGYVFGFWPSLLFKQH 160 YNNILRSKKHKLFIMGDSDGFTSIDVLKNKMDNCCDPKQVEIIPKVGHFELESPYYDDTICEIIDKFVKSSFR 240 ................................................................................ 80 ................................................................................ 160 ......................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd7_2550 11 NSSLYPK|QF 0.076 . cgd7_2550 22 HTSDGVK|LS 0.063 . cgd7_2550 26 GVKLSCR|SF 0.164 . cgd7_2550 34 FGNIPSK|VP 0.074 . cgd7_2550 71 ALSLADK|GY 0.086 . cgd7_2550 81 SIIFDHR|GI 0.142 . cgd7_2550 85 DHRGIGK|ST 0.089 . cgd7_2550 90 GKSTGYK|SI 0.102 . cgd7_2550 109 SVCNDIK|GK 0.063 . cgd7_2550 111 CNDIKGK|NS 0.068 . cgd7_2550 116 GKNSDIK|VV 0.080 . cgd7_2550 158 WPSLLFK|QH 0.067 . cgd7_2550 166 HYNNILR|SK 0.142 . cgd7_2550 168 NNILRSK|KH 0.058 . cgd7_2550 169 NILRSKK|HK 0.234 . cgd7_2550 171 LRSKKHK|LF 0.096 . cgd7_2550 188 TSIDVLK|NK 0.065 . cgd7_2550 190 IDVLKNK|MD 0.064 . cgd7_2550 198 DNCCDPK|QV 0.086 . cgd7_2550 205 QVEIIPK|VG 0.064 . cgd7_2550 226 ICEIIDK|FV 0.075 . cgd7_2550 229 IIDKFVK|SS 0.079 . cgd7_2550 233 FVKSSFR|-- 0.087 . ____________________________^_________________

  • Fasta :-

    >cgd7_2550 ATGTCTAATGAAAACTCAAGTTTATATCCGAAGCAATTTTCAATTCATACGAGCGATGGA GTAAAATTAAGTTGCAGAAGCTTTGGCAATATTCCATCAAAAGTTCCGATGACTGGGATC GAAAGTATAGTTTTTGTGCTAGTTCATCCATATGGGATAATGGGTGGTAGTAGTTCTAAT ATGCTTGGCTTAGCTTTGAGTTTGGCAGATAAGGGGTATGGTAGTATAATTTTTGATCAT AGGGGAATTGGTAAATCAACGGGATATAAGTCAATTTTTGGAAATAACGAAGTTTATGAT GTAGTCTCTGTATGCAATGATATAAAAGGAAAGAATAGTGATATTAAGGTTGTTTTAATT GGGTCTTCTGCAGGTGCTCCAATTGCTGGTTCAGCTGTTGATGAATGTGAAAATGTTATA GGATATATCGGAATAGGATACGTATTTGGGTTTTGGCCATCCTTGTTATTTAAACAACAT TACAACAATATTCTTAGATCGAAAAAACACAAATTATTCATCATGGGAGATTCCGATGGA TTCACTTCTATTGATGTTCTAAAAAATAAAATGGACAATTGCTGCGATCCTAAACAAGTC GAAATAATACCCAAAGTTGGGCATTTCGAATTGGAATCACCCTACTACGATGATACAATA TGCGAAATAATCGACAAATTTGTCAAATCATCATTCAGATAA
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  • Fasta :-

    MSNENSSLYPKQFSIHTSDGVKLSCRSFGNIPSKVPMTGIESIVFVLVHPYGIMGGSSSN MLGLALSLADKGYGSIIFDHRGIGKSTGYKSIFGNNEVYDVVSVCNDIKGKNSDIKVVLI GSSAGAPIAGSAVDECENVIGYIGIGYVFGFWPSLLFKQHYNNILRSKKHKLFIMGDSDG FTSIDVLKNKMDNCCDPKQVEIIPKVGHFELESPYYDDTICEIIDKFVKSSFR

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cgd7_2550      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India