cgd7_4900 | Ubiquitin carboxyl-terminal hydrolase

_IDPredictionOTHERSPmTPCS_Position
cgd7_4900OTHER0.9999840.0000080.000008
No Results

  • Fasta :-

    >cgd7_4900 MGENKDEFQEGENGLFRLVDSQEKKNEDIVRIDSEEDIEKTEMSVLCLYSSSGSVSDSYS SVGSSGFISISTGLSGSILTNDSISPVSSRSDSESYSIGSLSESSIPTFPTFKDSSFRTS HFSKETLEEEVDQQECIEDIPQINSENSLEELLFKNLTINGLVMKNLNSLTSKYSGDLLS ELMRLNLKDLVENFFGIYSIEYYEKNLPLICSFLSVLFELSYNENKLSELNVKLWIFFEL TFEEILKIFNIKEIDELPLIPVVYWMIENWNKYDMFLNFKNHENKVEEIKNKLNGILFSL HLRKDFEVPGPAVEYYFRLILDYRSGDAFQGCILYVIKSIKFLVNYLLGPIKVKSDKANF KGIIEILNNFDQNRTQIFSRTLDILILNSKSNERENQIQDMELNSTFEKTIPIYFFSAFF LIKYPEDKIIQNILLDIIISICNNNSLKFEHRKQSIVHIISLILHACKNTSSGGTLERSI VDLLLQVFNLEIWSYLDSFKIMEILDTVDGVIRGMTERARLGDSAKNEFEIISRLYQLQS ILLVTSSNGFKNEDKEKGGEAYNDYEVEFNENGWRTKLINSYMNLNEKDKGIRNIGNTCY LNSTIQCLALSYYFIEWLHEYMRNKFSKPNKLILYLFEFLTCILEPIKQDGKYNIVARIC SNNNAKSVDLRFVKEISNTFSFGKQHDASEFLRYLLTNIDDNCSPFIMLTEDYVKCLSCG AIESKKNHSLSIIDLYVFNNSLSHSDNRENLNLSNDYIITLDSLIKNHFLSENIPDSLDC DHCQQKSASERWNSIVNPSKYVILALHNYFWDQKSNKGIKQNEIKIIFNELFMLNNHKYI IYALIFHKGKTTNSGHYYTIGRKHFYDNSKEKNPSWFEYDDNIISYIESFYQIQKSNENP FLIFALLADK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd7_4900.fa Sequence name : cgd7_4900 Sequence length : 910 VALUES OF COMPUTED PARAMETERS Coef20 : 2.649 CoefTot : -0.250 ChDiff : -32 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.624 1.629 0.266 0.575 MesoH : 0.156 0.551 -0.133 0.327 MuHd_075 : 14.530 7.000 3.504 2.395 MuHd_095 : 27.313 15.473 6.481 5.899 MuHd_100 : 36.728 20.387 8.065 6.841 MuHd_105 : 38.060 21.543 8.705 6.868 Hmax_075 : -7.233 -5.017 -5.343 0.432 Hmax_095 : 1.600 3.900 -2.657 3.100 Hmax_100 : 0.700 4.900 -2.437 3.000 Hmax_105 : 1.487 3.938 -2.013 3.045 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9865 0.0135 DFMC : 0.9836 0.0164
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 910 cgd7_4900 MGENKDEFQEGENGLFRLVDSQEKKNEDIVRIDSEEDIEKTEMSVLCLYSSSGSVSDSYSSVGSSGFISISTGLSGSILT 80 NDSISPVSSRSDSESYSIGSLSESSIPTFPTFKDSSFRTSHFSKETLEEEVDQQECIEDIPQINSENSLEELLFKNLTIN 160 GLVMKNLNSLTSKYSGDLLSELMRLNLKDLVENFFGIYSIEYYEKNLPLICSFLSVLFELSYNENKLSELNVKLWIFFEL 240 TFEEILKIFNIKEIDELPLIPVVYWMIENWNKYDMFLNFKNHENKVEEIKNKLNGILFSLHLRKDFEVPGPAVEYYFRLI 320 LDYRSGDAFQGCILYVIKSIKFLVNYLLGPIKVKSDKANFKGIIEILNNFDQNRTQIFSRTLDILILNSKSNERENQIQD 400 MELNSTFEKTIPIYFFSAFFLIKYPEDKIIQNILLDIIISICNNNSLKFEHRKQSIVHIISLILHACKNTSSGGTLERSI 480 VDLLLQVFNLEIWSYLDSFKIMEILDTVDGVIRGMTERARLGDSAKNEFEIISRLYQLQSILLVTSSNGFKNEDKEKGGE 560 AYNDYEVEFNENGWRTKLINSYMNLNEKDKGIRNIGNTCYLNSTIQCLALSYYFIEWLHEYMRNKFSKPNKLILYLFEFL 640 TCILEPIKQDGKYNIVARICSNNNAKSVDLRFVKEISNTFSFGKQHDASEFLRYLLTNIDDNCSPFIMLTEDYVKCLSCG 720 AIESKKNHSLSIIDLYVFNNSLSHSDNRENLNLSNDYIITLDSLIKNHFLSENIPDSLDCDHCQQKSASERWNSIVNPSK 800 YVILALHNYFWDQKSNKGIKQNEIKIIFNELFMLNNHKYIIYALIFHKGKTTNSGHYYTIGRKHFYDNSKEKNPSWFEYD 880 DNIISYIESFYQIQKSNENPFLIFALLADK 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 .............................. 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd7_4900 5 --MGENK|DE 0.075 . cgd7_4900 17 GENGLFR|LV 0.170 . cgd7_4900 24 LVDSQEK|KN 0.062 . cgd7_4900 25 VDSQEKK|NE 0.118 . cgd7_4900 31 KNEDIVR|ID 0.098 . cgd7_4900 40 SEEDIEK|TE 0.059 . cgd7_4900 90 ISPVSSR|SD 0.173 . cgd7_4900 113 PTFPTFK|DS 0.067 . cgd7_4900 118 FKDSSFR|TS 0.093 . cgd7_4900 124 RTSHFSK|ET 0.088 . cgd7_4900 155 LEELLFK|NL 0.062 . cgd7_4900 165 INGLVMK|NL 0.063 . cgd7_4900 173 LNSLTSK|YS 0.101 . cgd7_4900 184 LLSELMR|LN 0.085 . cgd7_4900 188 LMRLNLK|DL 0.067 . cgd7_4900 205 SIEYYEK|NL 0.058 . cgd7_4900 226 LSYNENK|LS 0.060 . cgd7_4900 233 LSELNVK|LW 0.065 . cgd7_4900 247 TFEEILK|IF 0.066 . cgd7_4900 252 LKIFNIK|EI 0.069 . cgd7_4900 272 MIENWNK|YD 0.059 . cgd7_4900 280 DMFLNFK|NH 0.058 . cgd7_4900 285 FKNHENK|VE 0.066 . cgd7_4900 290 NKVEEIK|NK 0.060 . cgd7_4900 292 VEEIKNK|LN 0.072 . cgd7_4900 303 LFSLHLR|KD 0.086 . cgd7_4900 304 FSLHLRK|DF 0.105 . cgd7_4900 318 AVEYYFR|LI 0.084 . cgd7_4900 324 RLILDYR|SG 0.135 . cgd7_4900 338 CILYVIK|SI 0.070 . cgd7_4900 341 YVIKSIK|FL 0.069 . cgd7_4900 352 YLLGPIK|VK 0.061 . cgd7_4900 354 LGPIKVK|SD 0.081 . cgd7_4900 357 IKVKSDK|AN 0.080 . cgd7_4900 361 SDKANFK|GI 0.094 . cgd7_4900 374 NNFDQNR|TQ 0.083 . cgd7_4900 380 RTQIFSR|TL 0.103 . cgd7_4900 390 ILILNSK|SN 0.074 . cgd7_4900 394 NSKSNER|EN 0.084 . cgd7_4900 409 LNSTFEK|TI 0.075 . cgd7_4900 423 SAFFLIK|YP 0.080 . cgd7_4900 428 IKYPEDK|II 0.073 . cgd7_4900 448 CNNNSLK|FE 0.075 . cgd7_4900 452 SLKFEHR|KQ 0.100 . cgd7_4900 453 LKFEHRK|QS 0.097 . cgd7_4900 468 LILHACK|NT 0.071 . cgd7_4900 478 SGGTLER|SI 0.166 . cgd7_4900 500 SYLDSFK|IM 0.060 . cgd7_4900 513 TVDGVIR|GM 0.078 . cgd7_4900 518 IRGMTER|AR 0.073 . cgd7_4900 520 GMTERAR|LG 0.085 . cgd7_4900 526 RLGDSAK|NE 0.069 . cgd7_4900 534 EFEIISR|LY 0.063 . cgd7_4900 551 TSSNGFK|NE 0.075 . cgd7_4900 555 GFKNEDK|EK 0.065 . cgd7_4900 557 KNEDKEK|GG 0.078 . cgd7_4900 575 FNENGWR|TK 0.066 . cgd7_4900 577 ENGWRTK|LI 0.067 . cgd7_4900 588 YMNLNEK|DK 0.071 . cgd7_4900 590 NLNEKDK|GI 0.092 . cgd7_4900 593 EKDKGIR|NI 0.080 . cgd7_4900 623 WLHEYMR|NK 0.086 . cgd7_4900 625 HEYMRNK|FS 0.066 . cgd7_4900 628 MRNKFSK|PN 0.093 . cgd7_4900 631 KFSKPNK|LI 0.069 . cgd7_4900 648 CILEPIK|QD 0.060 . cgd7_4900 652 PIKQDGK|YN 0.062 . cgd7_4900 658 KYNIVAR|IC 0.111 . cgd7_4900 666 CSNNNAK|SV 0.123 . cgd7_4900 671 AKSVDLR|FV 0.214 . cgd7_4900 674 VDLRFVK|EI 0.119 . cgd7_4900 684 NTFSFGK|QH 0.073 . cgd7_4900 693 DASEFLR|YL 0.118 . cgd7_4900 715 LTEDYVK|CL 0.062 . cgd7_4900 725 CGAIESK|KN 0.061 . cgd7_4900 726 GAIESKK|NH 0.093 . cgd7_4900 748 LSHSDNR|EN 0.075 . cgd7_4900 766 TLDSLIK|NH 0.061 . cgd7_4900 786 CDHCQQK|SA 0.115 . cgd7_4900 791 QKSASER|WN 0.166 . cgd7_4900 800 SIVNPSK|YV 0.094 . cgd7_4900 814 NYFWDQK|SN 0.071 . cgd7_4900 817 WDQKSNK|GI 0.089 . cgd7_4900 820 KSNKGIK|QN 0.075 . cgd7_4900 825 IKQNEIK|II 0.088 . cgd7_4900 838 FMLNNHK|YI 0.068 . cgd7_4900 848 YALIFHK|GK 0.064 . cgd7_4900 850 LIFHKGK|TT 0.069 . cgd7_4900 862 HYYTIGR|KH 0.071 . cgd7_4900 863 YYTIGRK|HF 0.065 . cgd7_4900 870 HFYDNSK|EK 0.061 . cgd7_4900 872 YDNSKEK|NP 0.074 . cgd7_4900 895 SFYQIQK|SN 0.074 . cgd7_4900 910 FALLADK|-- 0.055 . ____________________________^_________________

  • Fasta :-

    >cgd7_4900 TAAGATATTGAAGTAAAAGAAGGAAAGAAGAGATTTCCACAGAAGAAGTCAAGGTGTTTG AAGATTAATGAATTAAAAGTTGTGTAGATGAGTGAGTATTTAAAGGCTTGAATTAATTAT TAATACCATCCTTCTGAATTGATAATGGGGGAGAATAAAGATGAGTTTCAGGAAGGAGAA AATGGACTCTTTCGGTTAGTTGATTCTCAAGAAAAAAAGAACGAAGATATAGTCAGAATT GATTCGGAGGAGGATATTGAAAAAACAGAGATGAGTGTTCTTTGTTTGTATTCAAGTTCA GGTTCAGTATCAGATTCATACTCTTCAGTAGGCTCATCAGGATTTATTTCTATTTCAACA GGATTATCCGGATCAATTTTAACAAATGATAGTATTTCTCCAGTTTCTTCAAGGTCAGAT TCAGAAAGTTACTCAATTGGATCACTATCAGAAAGTTCGATACCTACTTTTCCAACATTT AAAGATTCAAGTTTTAGAACATCACACTTTTCAAAAGAAACATTAGAAGAAGAGGTAGAT CAACAAGAATGTATAGAAGATATCCCACAAATTAATTCAGAGAATTCGCTTGAGGAGTTA CTTTTTAAAAATCTAACAATTAATGGACTAGTAATGAAGAATTTGAATAGCTTAACATCA AAATATTCAGGCGATTTACTTTCTGAGTTGATGAGGCTTAACTTAAAAGATTTAGTAGAG AATTTCTTTGGAATTTATTCAATAGAATACTATGAAAAGAATTTACCATTAATTTGCTCT TTTCTTTCAGTTCTTTTTGAACTTTCTTATAATGAAAATAAACTAAGTGAATTAAATGTA AAATTATGGATATTTTTTGAATTGACGTTTGAGGAGATTTTAAAGATTTTTAATATTAAA GAGATTGATGAGCTCCCATTAATTCCAGTAGTCTACTGGATGATAGAGAATTGGAATAAG TATGACATGTTTCTAAATTTTAAGAACCATGAAAATAAAGTAGAAGAAATTAAAAATAAG CTAAATGGAATCCTTTTTTCTTTACACCTTAGAAAAGATTTTGAAGTTCCTGGCCCAGCA GTAGAGTATTACTTTAGATTAATATTGGACTATAGGTCAGGAGATGCATTTCAGGGATGC ATTTTATATGTAATAAAATCCATAAAATTCCTTGTGAATTACTTACTAGGACCAATCAAA GTGAAATCTGATAAAGCCAATTTTAAAGGAATTATTGAGATTTTAAATAATTTTGATCAA AACAGAACCCAAATTTTCTCAAGAACATTAGATATTTTAATCTTAAATTCAAAATCAAAT GAGCGTGAAAACCAAATTCAAGATATGGAACTTAATTCAACTTTCGAAAAGACTATCCCA ATTTACTTCTTTTCAGCATTCTTCCTAATCAAATATCCAGAAGACAAAATCATCCAAAAC ATCCTCCTGGACATAATTATTTCAATCTGCAACAATAATTCACTAAAATTCGAGCATAGA AAACAATCAATTGTCCACATTATTAGTTTAATTTTACATGCATGCAAAAACACGTCATCA GGCGGGACATTAGAACGGTCAATAGTGGACTTATTATTGCAAGTATTTAATTTAGAAATA TGGAGTTACCTGGATAGTTTTAAAATTATGGAAATTTTGGATACGGTGGATGGAGTTATT AGGGGAATGACAGAAAGAGCGAGATTAGGTGATTCTGCGAAGAATGAGTTTGAAATAATT TCAAGATTATACCAGTTACAAAGTATACTACTGGTGACATCTAGTAATGGCTTTAAAAAT GAAGACAAAGAGAAAGGCGGTGAGGCTTATAATGATTACGAGGTGGAGTTCAATGAAAAT GGTTGGAGGACTAAGCTAATTAATTCTTATATGAATTTAAATGAAAAAGATAAAGGTATA CGAAATATTGGAAATACTTGCTATTTAAATTCAACAATTCAATGCTTGGCGTTGAGTTAC TATTTTATCGAATGGCTTCATGAATATATGAGAAACAAATTCTCTAAACCAAATAAATTA ATTTTGTATCTTTTCGAATTTTTAACTTGTATATTAGAGCCAATTAAACAAGATGGAAAA TATAACATAGTTGCAAGGATTTGCAGTAACAATAATGCTAAGTCTGTAGATTTAAGATTT GTTAAAGAAATATCCAATACATTCAGTTTTGGGAAACAGCATGATGCTTCTGAGTTTTTA AGATATTTATTAACAAATATTGATGATAATTGCTCACCTTTCATAATGTTGACAGAAGAT TACGTTAAATGTTTATCTTGCGGAGCGATTGAGTCAAAGAAAAATCATTCATTATCTATT ATTGATTTATATGTTTTTAATAACTCTTTATCTCATTCAGATAACAGAGAAAATCTTAAC TTAAGTAATGATTATATAATAACTCTGGATTCTCTGATTAAAAATCACTTCTTATCTGAA AATATTCCAGATTCTCTTGACTGTGACCATTGTCAACAGAAAAGTGCCTCCGAAAGATGG AATTCAATAGTTAATCCCTCTAAGTATGTTATTTTGGCATTACATAACTACTTTTGGGAC CAAAAATCAAATAAAGGCATAAAACAAAACGAGATAAAAATAATCTTTAATGAACTATTT ATGCTTAATAATCACAAATACATTATTTACGCACTCATCTTTCACAAAGGAAAGACTACC AACTCGGGACATTATTACACTATAGGAAGAAAACATTTCTACGATAATTCTAAAGAAAAA AACCCAAGTTGGTTTGAATACGATGATAATATTATCTCATATATTGAATCATTCTACCAA ATTCAGAAATCTAATGAAAATCCTTTCCTAATTTTTGCCTTACTTGCAGATAAATAATTA CTACTTCATTTATTCCTTCATCTCCTCTCCATTATACTACTATCATCTAATTATATATAT ATATATATATATATATATATATATTTATACACACATTAATACACTAGTTAAAGCACTTTT AACTTTTACTTTCCAAATTGTAATTTTCTCCAAACTGAATTATCCCAAATATTAATTACA TGTTACCGGTAGACAAGACGTGTGCATGCAATGCAGGGAAATATCGATTTACGAGACATA ATGTATCGCGGAATCTAAAAAACGCTTTTTATAAATAGAGAATAAATTAAAGAAGCGTGT AAGCAATATGTATAATATCACGATAATGTTATTAACAAAAATGGCAGGAATTTTCATGTA AGACAAAACGT
  • Download Fasta

  • Fasta :-

    MGENKDEFQEGENGLFRLVDSQEKKNEDIVRIDSEEDIEKTEMSVLCLYSSSGSVSDSYS SVGSSGFISISTGLSGSILTNDSISPVSSRSDSESYSIGSLSESSIPTFPTFKDSSFRTS HFSKETLEEEVDQQECIEDIPQINSENSLEELLFKNLTINGLVMKNLNSLTSKYSGDLLS ELMRLNLKDLVENFFGIYSIEYYEKNLPLICSFLSVLFELSYNENKLSELNVKLWIFFEL TFEEILKIFNIKEIDELPLIPVVYWMIENWNKYDMFLNFKNHENKVEEIKNKLNGILFSL HLRKDFEVPGPAVEYYFRLILDYRSGDAFQGCILYVIKSIKFLVNYLLGPIKVKSDKANF KGIIEILNNFDQNRTQIFSRTLDILILNSKSNERENQIQDMELNSTFEKTIPIYFFSAFF LIKYPEDKIIQNILLDIIISICNNNSLKFEHRKQSIVHIISLILHACKNTSSGGTLERSI VDLLLQVFNLEIWSYLDSFKIMEILDTVDGVIRGMTERARLGDSAKNEFEIISRLYQLQS ILLVTSSNGFKNEDKEKGGEAYNDYEVEFNENGWRTKLINSYMNLNEKDKGIRNIGNTCY LNSTIQCLALSYYFIEWLHEYMRNKFSKPNKLILYLFEFLTCILEPIKQDGKYNIVARIC SNNNAKSVDLRFVKEISNTFSFGKQHDASEFLRYLLTNIDDNCSPFIMLTEDYVKCLSCG AIESKKNHSLSIIDLYVFNNSLSHSDNRENLNLSNDYIITLDSLIKNHFLSENIPDSLDC DHCQQKSASERWNSIVNPSKYVILALHNYFWDQKSNKGIKQNEIKIIFNELFMLNNHKYI IYALIFHKGKTTNSGHYYTIGRKHFYDNSKEKNPSWFEYDDNIISYIESFYQIQKSNENP FLIFALLADK

  • title: Active Site
  • coordinates: N594,C599,H856,D881
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd7_490085 SNDSISPVSS0.996unspcgd7_490085 SNDSISPVSS0.996unspcgd7_490085 SNDSISPVSS0.996unspcgd7_490089 SSPVSSRSDS0.997unspcgd7_490091 SVSSRSDSES0.995unspcgd7_490093 SSRSDSESYS0.995unspcgd7_4900120 SSFRTSHFSK0.991unspcgd7_4900148 SNSENSLEEL0.996unspcgd7_4900355 SIKVKSDKAN0.991unspcgd7_4900731 SNHSLSIIDL0.995unspcgd7_4900743 SNNSLSHSDN0.996unspcgd7_4900875 SEKNPSWFEY0.995unspcgd7_490034 SVRIDSEEDI0.998unspcgd7_490054 SSSSGSVSDS0.996unsp

cgd7_4900      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India