cgd8_1320 | Calpain like thiol protease

_IDPredictionOTHERSPmTPCS_Position
cgd8_1320OTHER0.9912910.0000790.008631
No Results

  • Fasta :-

    >cgd8_1320 MLISKLFKRKTTNTLNHVDNVNVETDQLFELKKMVMEKYKNLMRLKRNDQDQIDYRIYIE SSFINDSCFLPPLLIDKKPGTKLTKLNNDQAQFLLLMLLYNQQLSFQENIINQSINICLK EQYILIVEQMVRSLMLSKKQKKMVVKWKKLNSNVELFPISNFVNITSSNIIQGFIGDCSF IVVLSLLLEHEKKFDSNLLSNLISPIKFSIKNQNHQNQNNTNGYQKIHNYENNNNNINEL DDVLCLYKCKLLINGIWRNIFVDSLIPIDSGNNCLLSHFDCNKYYGITLIEKAYLKVMAN RYDSVESNPSIDLYYLTGWIPETISIKSHYEKKGSYFLNLWNRIKKPIQNGYCLMALGTN EINSNIDNHARLSPSNYRSSRDKPLNRFDNEIDNNQLEYKFISKEDICKKTGLVTKHAYQ VLRIVELVNQENDSIRRLILLRNPWGKISWKGKFSKYDKEIWTNELVELLGNHFNYKVNQ DNGIFWIEWNDILKWFSHIYLAWDPEKVSKHLKKVHGKWLPCPHNSILKDDLHLLYFYPQ YKLSIDTKLINKLKMDHSNLLNEKEFINRDINKPQSNINDYKRLKLHFDSNQNDYIEDYS KNNLFVRKWKKSDIIDYENYNVGDIWIVLNRHIDYLEAKEFDDNYNKPDINNIPFMSISI FRGRSRIVTQERLPIMQGVYSNGNVITFKTSIFQLLREYEHFDLQENKDFVLVITQYQSN KSFNYTLNIYSNFEMSIKLLDSYFQKIIYPISNNYSFIEINGKILHYNYSERYYISLMRN SKIKLVPAISNKYFNLKSETDKVNTLNSFKSELSDEHFRVLILLEIKEKCNNFKLRIFPE TFDEQDKITKLSSSNDLYNNSNCKFTTSICSYGNYFILIDFKEKQQDFVKGNFFKLIIYY QKI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd8_1320.fa Sequence name : cgd8_1320 Sequence length : 903 VALUES OF COMPUTED PARAMETERS Coef20 : 4.125 CoefTot : -0.233 ChDiff : 19 ZoneTo : 18 KR : 4 DE : 0 CleavSite : 11 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.324 1.924 0.306 0.679 MesoH : -0.517 0.545 -0.399 0.234 MuHd_075 : 25.496 12.348 4.814 6.122 MuHd_095 : 36.765 25.034 11.539 8.473 MuHd_100 : 31.055 16.751 8.590 6.386 MuHd_105 : 21.882 7.178 4.385 3.491 Hmax_075 : 6.387 3.675 -2.217 2.420 Hmax_095 : 15.200 13.100 2.457 4.520 Hmax_100 : 15.200 13.100 2.457 4.520 Hmax_105 : 9.700 5.775 -1.190 2.260 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2068 0.7932 DFMC : 0.4274 0.5726 This protein is probably imported in mitochondria. f(Ser) = 0.0556 f(Arg) = 0.0556 CMi = 0.37594 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 903 cgd8_1320 MLISKLFKRKTTNTLNHVDNVNVETDQLFELKKMVMEKYKNLMRLKRNDQDQIDYRIYIESSFINDSCFLPPLLIDKKPG 80 TKLTKLNNDQAQFLLLMLLYNQQLSFQENIINQSINICLKEQYILIVEQMVRSLMLSKKQKKMVVKWKKLNSNVELFPIS 160 NFVNITSSNIIQGFIGDCSFIVVLSLLLEHEKKFDSNLLSNLISPIKFSIKNQNHQNQNNTNGYQKIHNYENNNNNINEL 240 DDVLCLYKCKLLINGIWRNIFVDSLIPIDSGNNCLLSHFDCNKYYGITLIEKAYLKVMANRYDSVESNPSIDLYYLTGWI 320 PETISIKSHYEKKGSYFLNLWNRIKKPIQNGYCLMALGTNEINSNIDNHARLSPSNYRSSRDKPLNRFDNEIDNNQLEYK 400 FISKEDICKKTGLVTKHAYQVLRIVELVNQENDSIRRLILLRNPWGKISWKGKFSKYDKEIWTNELVELLGNHFNYKVNQ 480 DNGIFWIEWNDILKWFSHIYLAWDPEKVSKHLKKVHGKWLPCPHNSILKDDLHLLYFYPQYKLSIDTKLINKLKMDHSNL 560 LNEKEFINRDINKPQSNINDYKRLKLHFDSNQNDYIEDYSKNNLFVRKWKKSDIIDYENYNVGDIWIVLNRHIDYLEAKE 640 FDDNYNKPDINNIPFMSISIFRGRSRIVTQERLPIMQGVYSNGNVITFKTSIFQLLREYEHFDLQENKDFVLVITQYQSN 720 KSFNYTLNIYSNFEMSIKLLDSYFQKIIYPISNNYSFIEINGKILHYNYSERYYISLMRNSKIKLVPAISNKYFNLKSET 800 DKVNTLNSFKSELSDEHFRVLILLEIKEKCNNFKLRIFPETFDEQDKITKLSSSNDLYNNSNCKFTTSICSYGNYFILID 880 FKEKQQDFVKGNFFKLIIYYQKI 960 ..............................................P................................. 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ....................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ cgd8_1320 5 --MLISK|LF 0.057 . cgd8_1320 8 LISKLFK|RK 0.069 . cgd8_1320 9 ISKLFKR|KT 0.215 . cgd8_1320 10 SKLFKRK|TT 0.092 . cgd8_1320 32 DQLFELK|KM 0.053 . cgd8_1320 33 QLFELKK|MV 0.159 . cgd8_1320 38 KKMVMEK|YK 0.067 . cgd8_1320 40 MVMEKYK|NL 0.066 . cgd8_1320 44 KYKNLMR|LK 0.078 . cgd8_1320 46 KNLMRLK|RN 0.064 . cgd8_1320 47 NLMRLKR|ND 0.605 *ProP* cgd8_1320 56 QDQIDYR|IY 0.085 . cgd8_1320 77 PPLLIDK|KP 0.064 . cgd8_1320 78 PLLIDKK|PG 0.072 . cgd8_1320 82 DKKPGTK|LT 0.057 . cgd8_1320 85 PGTKLTK|LN 0.060 . cgd8_1320 120 SINICLK|EQ 0.062 . cgd8_1320 132 IVEQMVR|SL 0.109 . cgd8_1320 138 RSLMLSK|KQ 0.057 . cgd8_1320 139 SLMLSKK|QK 0.126 . cgd8_1320 141 MLSKKQK|KM 0.072 . cgd8_1320 142 LSKKQKK|MV 0.166 . cgd8_1320 146 QKKMVVK|WK 0.063 . cgd8_1320 148 KMVVKWK|KL 0.074 . cgd8_1320 149 MVVKWKK|LN 0.122 . cgd8_1320 192 LLLEHEK|KF 0.061 . cgd8_1320 193 LLEHEKK|FD 0.119 . cgd8_1320 207 NLISPIK|FS 0.069 . cgd8_1320 211 PIKFSIK|NQ 0.062 . cgd8_1320 226 NTNGYQK|IH 0.060 . cgd8_1320 248 DVLCLYK|CK 0.052 . cgd8_1320 250 LCLYKCK|LL 0.065 . cgd8_1320 258 LINGIWR|NI 0.083 . cgd8_1320 283 SHFDCNK|YY 0.076 . cgd8_1320 292 GITLIEK|AY 0.057 . cgd8_1320 296 IEKAYLK|VM 0.053 . cgd8_1320 301 LKVMANR|YD 0.097 . cgd8_1320 327 PETISIK|SH 0.071 . cgd8_1320 332 IKSHYEK|KG 0.080 . cgd8_1320 333 KSHYEKK|GS 0.111 . cgd8_1320 343 FLNLWNR|IK 0.105 . cgd8_1320 345 NLWNRIK|KP 0.063 . cgd8_1320 346 LWNRIKK|PI 0.387 . cgd8_1320 371 NIDNHAR|LS 0.080 . cgd8_1320 378 LSPSNYR|SS 0.119 . cgd8_1320 381 SNYRSSR|DK 0.332 . cgd8_1320 383 YRSSRDK|PL 0.081 . cgd8_1320 387 RDKPLNR|FD 0.099 . cgd8_1320 400 NNQLEYK|FI 0.088 . cgd8_1320 404 EYKFISK|ED 0.057 . cgd8_1320 409 SKEDICK|KT 0.074 . cgd8_1320 410 KEDICKK|TG 0.075 . cgd8_1320 416 KTGLVTK|HA 0.092 . cgd8_1320 423 HAYQVLR|IV 0.141 . cgd8_1320 436 QENDSIR|RL 0.083 . cgd8_1320 437 ENDSIRR|LI 0.089 . cgd8_1320 442 RRLILLR|NP 0.085 . cgd8_1320 447 LRNPWGK|IS 0.090 . cgd8_1320 451 WGKISWK|GK 0.071 . cgd8_1320 453 KISWKGK|FS 0.086 . cgd8_1320 456 WKGKFSK|YD 0.078 . cgd8_1320 459 KFSKYDK|EI 0.082 . cgd8_1320 477 GNHFNYK|VN 0.069 . cgd8_1320 494 EWNDILK|WF 0.068 . cgd8_1320 507 LAWDPEK|VS 0.058 . cgd8_1320 510 DPEKVSK|HL 0.075 . cgd8_1320 513 KVSKHLK|KV 0.097 . cgd8_1320 514 VSKHLKK|VH 0.170 . cgd8_1320 518 LKKVHGK|WL 0.070 . cgd8_1320 529 PHNSILK|DD 0.062 . cgd8_1320 542 YFYPQYK|LS 0.057 . cgd8_1320 548 KLSIDTK|LI 0.076 . cgd8_1320 552 DTKLINK|LK 0.053 . cgd8_1320 554 KLINKLK|MD 0.069 . cgd8_1320 564 SNLLNEK|EF 0.055 . cgd8_1320 569 EKEFINR|DI 0.110 . cgd8_1320 573 INRDINK|PQ 0.079 . cgd8_1320 582 SNINDYK|RL 0.066 . cgd8_1320 583 NINDYKR|LK 0.129 . cgd8_1320 585 NDYKRLK|LH 0.062 . cgd8_1320 601 YIEDYSK|NN 0.057 . cgd8_1320 607 KNNLFVR|KW 0.115 . cgd8_1320 608 NNLFVRK|WK 0.077 . cgd8_1320 610 LFVRKWK|KS 0.150 . cgd8_1320 611 FVRKWKK|SD 0.131 . cgd8_1320 631 IWIVLNR|HI 0.114 . cgd8_1320 639 IDYLEAK|EF 0.070 . cgd8_1320 647 FDDNYNK|PD 0.057 . cgd8_1320 662 MSISIFR|GR 0.128 . cgd8_1320 664 ISIFRGR|SR 0.121 . cgd8_1320 666 IFRGRSR|IV 0.136 . cgd8_1320 672 RIVTQER|LP 0.081 . cgd8_1320 689 GNVITFK|TS 0.067 . cgd8_1320 697 SIFQLLR|EY 0.082 . cgd8_1320 708 FDLQENK|DF 0.068 . cgd8_1320 721 TQYQSNK|SF 0.087 . cgd8_1320 738 NFEMSIK|LL 0.062 . cgd8_1320 746 LDSYFQK|II 0.082 . cgd8_1320 763 FIEINGK|IL 0.058 . cgd8_1320 772 HYNYSER|YY 0.104 . cgd8_1320 779 YYISLMR|NS 0.076 . cgd8_1320 782 SLMRNSK|IK 0.083 . cgd8_1320 784 MRNSKIK|LV 0.095 . cgd8_1320 792 VPAISNK|YF 0.068 . cgd8_1320 797 NKYFNLK|SE 0.096 . cgd8_1320 802 LKSETDK|VN 0.064 . cgd8_1320 810 NTLNSFK|SE 0.065 . cgd8_1320 819 LSDEHFR|VL 0.077 . cgd8_1320 827 LILLEIK|EK 0.054 . cgd8_1320 829 LLEIKEK|CN 0.069 . cgd8_1320 834 EKCNNFK|LR 0.060 . cgd8_1320 836 CNNFKLR|IF 0.135 . cgd8_1320 847 TFDEQDK|IT 0.056 . cgd8_1320 850 EQDKITK|LS 0.057 . cgd8_1320 864 YNNSNCK|FT 0.072 . cgd8_1320 882 FILIDFK|EK 0.057 . cgd8_1320 884 LIDFKEK|QQ 0.066 . cgd8_1320 890 KQQDFVK|GN 0.071 . cgd8_1320 895 VKGNFFK|LI 0.074 . cgd8_1320 902 LIIYYQK|I- 0.063 . ____________________________^_________________

  • Fasta :-

    >cgd8_1320 ATGTTAATATCAAAGTTATTTAAAAGAAAAACAACAAATACATTGAATCATGTGGATAAT GTAAATGTTGAGACTGATCAACTATTTGAACTTAAAAAAATGGTTATGGAAAAATACAAA AATTTGATGAGATTAAAAAGAAATGATCAAGATCAAATAGATTATCGAATTTATATAGAA TCATCATTTATCAATGATTCTTGTTTTTTGCCTCCACTTTTAATCGATAAAAAACCAGGA ACAAAGCTTACAAAGTTAAATAATGATCAAGCACAATTTTTGTTGTTAATGTTATTATAT AATCAACAACTATCATTTCAAGAGAATATAATAAATCAATCAATTAATATTTGTTTGAAG GAACAATATATATTAATAGTAGAACAAATGGTGAGAAGTTTAATGTTATCAAAGAAACAG AAAAAAATGGTAGTAAAATGGAAGAAGTTGAATAGTAATGTAGAATTATTTCCAATTAGT AATTTTGTGAATATTACTTCGAGTAATATAATACAAGGATTTATTGGAGATTGTTCATTT ATTGTTGTGTTATCTTTATTGCTAGAGCATGAGAAGAAATTTGATTCAAATTTATTATCA AATCTGATAAGTCCAATAAAATTCTCAATAAAGAATCAAAATCATCAGAATCAAAATAAT ACTAATGGTTATCAAAAAATTCATAATTATGAAAATAATAATAATAATATTAATGAATTG GATGATGTGTTATGTCTTTATAAATGTAAATTATTAATTAATGGTATTTGGAGAAATATT TTTGTGGATAGTTTAATTCCTATTGATTCTGGAAATAATTGTTTGTTATCACATTTTGAT TGTAATAAATATTATGGTATAACCTTAATTGAAAAAGCATATTTAAAAGTTATGGCAAAT AGATATGATTCTGTTGAAAGTAATCCTTCAATAGATTTATATTATTTAACAGGATGGATA CCTGAAACTATTTCTATTAAATCACATTATGAAAAAAAAGGGAGCTATTTTCTAAATTTA TGGAATCGTATAAAAAAGCCAATACAAAATGGATATTGCTTAATGGCTTTGGGTACTAAT GAAATTAATTCAAATATTGATAATCATGCAAGATTAAGTCCTAGTAATTATAGAAGTTCT CGAGATAAACCACTTAATAGATTTGATAATGAAATTGATAATAATCAGTTAGAATATAAG TTTATTTCAAAAGAAGATATTTGTAAAAAAACTGGATTAGTAACTAAACATGCATATCAA GTTTTAAGAATTGTTGAACTAGTTAATCAAGAAAATGATTCTATTCGCAGATTAATTTTA TTAAGAAATCCATGGGGAAAAATCAGTTGGAAAGGAAAATTCTCAAAATATGATAAAGAA ATATGGACTAATGAACTTGTAGAATTATTAGGTAATCATTTTAATTATAAAGTTAATCAA GATAATGGAATTTTTTGGATTGAATGGAATGATATATTGAAATGGTTTTCACATATATAT TTAGCTTGGGATCCTGAAAAAGTATCCAAACATTTAAAAAAAGTACATGGTAAATGGTTA CCATGCCCACATAATTCAATATTAAAAGATGATTTACATCTTTTATATTTTTATCCTCAA TATAAGTTATCTATTGATACTAAGTTAATAAATAAATTAAAAATGGATCATTCAAATTTA TTGAATGAAAAAGAATTCATTAATCGAGACATTAATAAACCACAATCAAATATTAATGAT TATAAAAGATTAAAGTTACATTTTGATTCAAATCAAAATGATTATATTGAAGATTATTCA AAAAATAATCTATTTGTAAGAAAATGGAAAAAATCCGATATTATTGATTATGAAAATTAT AATGTTGGTGATATTTGGATTGTATTAAATAGACATATTGATTATTTGGAAGCAAAAGAA TTTGATGATAATTACAATAAGCCAGATATTAATAATATACCTTTTATGTCAATAAGTATA TTTAGAGGTAGAAGCCGAATAGTCACTCAAGAAAGGTTACCAATTATGCAAGGTGTCTAT AGTAATGGTAATGTAATTACATTCAAAACAAGTATTTTTCAATTATTAAGAGAATATGAA CATTTTGATTTACAAGAAAATAAAGATTTTGTATTAGTTATTACTCAATATCAAAGTAAT AAAAGTTTTAATTATACATTAAATATATATAGTAATTTTGAAATGAGTATTAAGTTATTG GATTCTTATTTTCAAAAGATTATATATCCTATTAGTAATAATTATAGTTTTATAGAAATT AATGGTAAAATTCTACATTATAATTATAGTGAAAGATATTATATTAGTTTAATGAGAAAT TCAAAAATTAAATTGGTTCCTGCTATATCTAATAAATATTTTAATTTAAAAAGCGAAACA GATAAAGTAAATACTTTAAATTCATTTAAAAGTGAGTTATCTGATGAACATTTCAGAGTT TTAATATTATTAGAAATTAAAGAAAAATGTAATAATTTCAAGTTAAGGATTTTTCCAGAA ACCTTTGATGAACAAGACAAAATCACTAAATTGAGTTCCAGTAATGATTTATATAATAAT AGTAATTGTAAATTTACTACATCCATTTGCAGTTATGGTAATTACTTTATTTTGATTGAT TTCAAAGAAAAACAACAAGATTTTGTAAAAGGCAACTTTTTTAAGCTTATTATTTATTAT CAAAAAATTTAA
  • Download Fasta

  • Fasta :-

    MLISKLFKRKTTNTLNHVDNVNVETDQLFELKKMVMEKYKNLMRLKRNDQDQIDYRIYIE SSFINDSCFLPPLLIDKKPGTKLTKLNNDQAQFLLLMLLYNQQLSFQENIINQSINICLK EQYILIVEQMVRSLMLSKKQKKMVVKWKKLNSNVELFPISNFVNITSSNIIQGFIGDCSF IVVLSLLLEHEKKFDSNLLSNLISPIKFSIKNQNHQNQNNTNGYQKIHNYENNNNNINEL DDVLCLYKCKLLINGIWRNIFVDSLIPIDSGNNCLLSHFDCNKYYGITLIEKAYLKVMAN RYDSVESNPSIDLYYLTGWIPETISIKSHYEKKGSYFLNLWNRIKKPIQNGYCLMALGTN EINSNIDNHARLSPSNYRSSRDKPLNRFDNEIDNNQLEYKFISKEDICKKTGLVTKHAYQ VLRIVELVNQENDSIRRLILLRNPWGKISWKGKFSKYDKEIWTNELVELLGNHFNYKVNQ DNGIFWIEWNDILKWFSHIYLAWDPEKVSKHLKKVHGKWLPCPHNSILKDDLHLLYFYPQ YKLSIDTKLINKLKMDHSNLLNEKEFINRDINKPQSNINDYKRLKLHFDSNQNDYIEDYS KNNLFVRKWKKSDIIDYENYNVGDIWIVLNRHIDYLEAKEFDDNYNKPDINNIPFMSISI FRGRSRIVTQERLPIMQGVYSNGNVITFKTSIFQLLREYEHFDLQENKDFVLVITQYQSN KSFNYTLNIYSNFEMSIKLLDSYFQKIIYPISNNYSFIEINGKILHYNYSERYYISLMRN SKIKLVPAISNKYFNLKSETDKVNTLNSFKSELSDEHFRVLILLEIKEKCNNFKLRIFPE TFDEQDKITKLSSSNDLYNNSNCKFTTSICSYGNYFILIDFKEKQQDFVKGNFFKLIIYY QKI

  • title: catalytic site
  • coordinates: C178,H417,N443
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd8_1320373 SHARLSPSNY0.995unspcgd8_1320373 SHARLSPSNY0.995unspcgd8_1320373 SHARLSPSNY0.995unspcgd8_1320379 SSNYRSSRDK0.995unspcgd8_1320403 SYKFISKEDI0.995unspcgd8_1320304 SNRYDSVESN0.997unspcgd8_1320328 SISIKSHYEK0.995unsp

cgd8_1320      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India