cgd8_4340 | Ubiquitin carboxyl-terminal hydrolase of the cysteine proteinase fold

_IDPredictionOTHERSPmTPCS_Position
cgd8_4340OTHER0.9991700.0001070.000722
No Results

  • Fasta :-

    >cgd8_4340 MASILSQEAEKRQDSHPVTLQLSNRLVNFVSGGFLANKTGIESSSYVSDNSQISDKTQKH MDKLKEKEQIENNVPLAKPEYYYFPPELLTDARDFLEPKEISHFRPYGRGLANPGWNTCY FNSILQALTYAPYLSIDCLRRNHQKICKHMKDHLVCIMCMFEDHVNIMLDNTSKSNTKND QPVVSSFIKCAQKLIWKRFRIGMMHDAQEFLRYFLEALHKSCLPKNLQTDQTFRKIHPIA ASTTYIGQLFCGFFLSRIVCHNCQYTSNTYDPFMDVPLDIMGVSNLENALKLFTKIEYLK GENRYMCPKCNQRSDASKQLLIEKLPPLLTIQLKRFSYVGHGSRKPNKAINFSDVLDLQP YMSSKTYSESKVSSSKSESSYIYKLWAVVCHSGNTLSCGHYYTHAKSIDNKWYCFNDDYV KPTRIENVLNENHKAYLLFYYRSDFNKYDLLKDSGVSIESLGKSQIITPLAPEISFINLQ LKSNSKSSINGKNNNSKESSNSESNLNEFLDQLLTNKSKGERDLAQNQDQDPNLQFYQNQ QNNNNIRLVLNPIINTDVNNEKLDSKISIISKNEQTEKIIKAKICNFKLRSLLLCDNWIT RSKSRRNLATIFYLKKLKKLGLSMNYFIKSKSGNCSNGKVLISNINKSQIDTWEDLNLSN DTITSLEQAQKSLLARSNIRSDYDKEYDKGKVKKPLRQAILASTSSNNNNEKNTNSKFQA KKSAFMEKSNIKDLDTLSTSELFDIAFKNKGNLKNKNKRKNVRIR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd8_4340.fa Sequence name : cgd8_4340 Sequence length : 765 VALUES OF COMPUTED PARAMETERS Coef20 : 3.724 CoefTot : 0.332 ChDiff : 33 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.665 1.371 0.273 0.601 MesoH : -0.497 0.203 -0.359 0.186 MuHd_075 : 15.283 16.362 6.138 5.283 MuHd_095 : 13.192 6.164 2.712 2.779 MuHd_100 : 10.549 8.499 1.984 1.177 MuHd_105 : 9.962 12.909 3.049 1.818 Hmax_075 : -3.733 8.517 -1.791 3.010 Hmax_095 : 2.362 0.800 -2.870 1.461 Hmax_100 : -0.700 -1.100 -3.416 1.030 Hmax_105 : -3.150 0.500 -4.017 0.010 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8320 0.1680 DFMC : 0.8051 0.1949
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 765 cgd8_4340 MASILSQEAEKRQDSHPVTLQLSNRLVNFVSGGFLANKTGIESSSYVSDNSQISDKTQKHMDKLKEKEQIENNVPLAKPE 80 YYYFPPELLTDARDFLEPKEISHFRPYGRGLANPGWNTCYFNSILQALTYAPYLSIDCLRRNHQKICKHMKDHLVCIMCM 160 FEDHVNIMLDNTSKSNTKNDQPVVSSFIKCAQKLIWKRFRIGMMHDAQEFLRYFLEALHKSCLPKNLQTDQTFRKIHPIA 240 ASTTYIGQLFCGFFLSRIVCHNCQYTSNTYDPFMDVPLDIMGVSNLENALKLFTKIEYLKGENRYMCPKCNQRSDASKQL 320 LIEKLPPLLTIQLKRFSYVGHGSRKPNKAINFSDVLDLQPYMSSKTYSESKVSSSKSESSYIYKLWAVVCHSGNTLSCGH 400 YYTHAKSIDNKWYCFNDDYVKPTRIENVLNENHKAYLLFYYRSDFNKYDLLKDSGVSIESLGKSQIITPLAPEISFINLQ 480 LKSNSKSSINGKNNNSKESSNSESNLNEFLDQLLTNKSKGERDLAQNQDQDPNLQFYQNQQNNNNIRLVLNPIINTDVNN 560 EKLDSKISIISKNEQTEKIIKAKICNFKLRSLLLCDNWITRSKSRRNLATIFYLKKLKKLGLSMNYFIKSKSGNCSNGKV 640 LISNINKSQIDTWEDLNLSNDTITSLEQAQKSLLARSNIRSDYDKEYDKGKVKKPLRQAILASTSSNNNNEKNTNSKFQA 720 KKSAFMEKSNIKDLDTLSTSELFDIAFKNKGNLKNKNKRKNVRIR 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............................................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd8_4340 11 LSQEAEK|RQ 0.062 . cgd8_4340 12 SQEAEKR|QD 0.174 . cgd8_4340 25 TLQLSNR|LV 0.124 . cgd8_4340 38 GGFLANK|TG 0.056 . cgd8_4340 56 NSQISDK|TQ 0.063 . cgd8_4340 59 ISDKTQK|HM 0.066 . cgd8_4340 63 TQKHMDK|LK 0.073 . cgd8_4340 65 KHMDKLK|EK 0.094 . cgd8_4340 67 MDKLKEK|EQ 0.062 . cgd8_4340 78 NNVPLAK|PE 0.064 . cgd8_4340 93 ELLTDAR|DF 0.080 . cgd8_4340 99 RDFLEPK|EI 0.072 . cgd8_4340 105 KEISHFR|PY 0.158 . cgd8_4340 109 HFRPYGR|GL 0.100 . cgd8_4340 140 LSIDCLR|RN 0.093 . cgd8_4340 141 SIDCLRR|NH 0.119 . cgd8_4340 145 LRRNHQK|IC 0.083 . cgd8_4340 148 NHQKICK|HM 0.071 . cgd8_4340 151 KICKHMK|DH 0.087 . cgd8_4340 174 MLDNTSK|SN 0.075 . cgd8_4340 178 TSKSNTK|ND 0.069 . cgd8_4340 189 VVSSFIK|CA 0.074 . cgd8_4340 193 FIKCAQK|LI 0.062 . cgd8_4340 197 AQKLIWK|RF 0.060 . cgd8_4340 198 QKLIWKR|FR 0.180 . cgd8_4340 200 LIWKRFR|IG 0.094 . cgd8_4340 212 DAQEFLR|YF 0.105 . cgd8_4340 220 FLEALHK|SC 0.072 . cgd8_4340 225 HKSCLPK|NL 0.081 . cgd8_4340 234 QTDQTFR|KI 0.101 . cgd8_4340 235 TDQTFRK|IH 0.089 . cgd8_4340 257 CGFFLSR|IV 0.093 . cgd8_4340 291 NLENALK|LF 0.065 . cgd8_4340 295 ALKLFTK|IE 0.062 . cgd8_4340 300 TKIEYLK|GE 0.061 . cgd8_4340 304 YLKGENR|YM 0.092 . cgd8_4340 309 NRYMCPK|CN 0.071 . cgd8_4340 313 CPKCNQR|SD 0.110 . cgd8_4340 318 QRSDASK|QL 0.075 . cgd8_4340 324 KQLLIEK|LP 0.053 . cgd8_4340 334 LLTIQLK|RF 0.074 . cgd8_4340 335 LTIQLKR|FS 0.220 . cgd8_4340 344 YVGHGSR|KP 0.077 . cgd8_4340 345 VGHGSRK|PN 0.095 . cgd8_4340 348 GSRKPNK|AI 0.074 . cgd8_4340 365 QPYMSSK|TY 0.077 . cgd8_4340 371 KTYSESK|VS 0.063 . cgd8_4340 376 SKVSSSK|SE 0.079 . cgd8_4340 384 ESSYIYK|LW 0.073 . cgd8_4340 406 HYYTHAK|SI 0.107 . cgd8_4340 411 AKSIDNK|WY 0.076 . cgd8_4340 421 FNDDYVK|PT 0.057 . cgd8_4340 424 DYVKPTR|IE 0.074 . cgd8_4340 434 VLNENHK|AY 0.058 . cgd8_4340 442 YLLFYYR|SD 0.093 . cgd8_4340 447 YRSDFNK|YD 0.074 . cgd8_4340 452 NKYDLLK|DS 0.084 . cgd8_4340 463 SIESLGK|SQ 0.066 . cgd8_4340 482 FINLQLK|SN 0.086 . cgd8_4340 486 QLKSNSK|SS 0.074 . cgd8_4340 492 KSSINGK|NN 0.083 . cgd8_4340 497 GKNNNSK|ES 0.086 . cgd8_4340 517 DQLLTNK|SK 0.068 . cgd8_4340 519 LLTNKSK|GE 0.064 . cgd8_4340 522 NKSKGER|DL 0.163 . cgd8_4340 547 QNNNNIR|LV 0.112 . cgd8_4340 562 TDVNNEK|LD 0.064 . cgd8_4340 566 NEKLDSK|IS 0.059 . cgd8_4340 572 KISIISK|NE 0.062 . cgd8_4340 578 KNEQTEK|II 0.073 . cgd8_4340 581 QTEKIIK|AK 0.057 . cgd8_4340 583 EKIIKAK|IC 0.082 . cgd8_4340 588 AKICNFK|LR 0.061 . cgd8_4340 590 ICNFKLR|SL 0.159 . cgd8_4340 601 CDNWITR|SK 0.124 . cgd8_4340 603 NWITRSK|SR 0.066 . cgd8_4340 605 ITRSKSR|RN 0.090 . cgd8_4340 606 TRSKSRR|NL 0.376 . cgd8_4340 615 ATIFYLK|KL 0.059 . cgd8_4340 616 TIFYLKK|LK 0.092 . cgd8_4340 618 FYLKKLK|KL 0.065 . cgd8_4340 619 YLKKLKK|LG 0.074 . cgd8_4340 629 SMNYFIK|SK 0.104 . cgd8_4340 631 NYFIKSK|SG 0.069 . cgd8_4340 639 GNCSNGK|VL 0.062 . cgd8_4340 647 LISNINK|SQ 0.082 . cgd8_4340 671 SLEQAQK|SL 0.070 . cgd8_4340 676 QKSLLAR|SN 0.175 . cgd8_4340 680 LARSNIR|SD 0.148 . cgd8_4340 685 IRSDYDK|EY 0.089 . cgd8_4340 689 YDKEYDK|GK 0.057 . cgd8_4340 691 KEYDKGK|VK 0.065 . cgd8_4340 693 YDKGKVK|KP 0.056 . cgd8_4340 694 DKGKVKK|PL 0.178 . cgd8_4340 697 KVKKPLR|QA 0.091 . cgd8_4340 712 SNNNNEK|NT 0.077 . cgd8_4340 717 EKNTNSK|FQ 0.071 . cgd8_4340 721 NSKFQAK|KS 0.072 . cgd8_4340 722 SKFQAKK|SA 0.197 . cgd8_4340 728 KSAFMEK|SN 0.123 . cgd8_4340 732 MEKSNIK|DL 0.075 . cgd8_4340 748 LFDIAFK|NK 0.056 . cgd8_4340 750 DIAFKNK|GN 0.066 . cgd8_4340 754 KNKGNLK|NK 0.060 . cgd8_4340 756 KGNLKNK|NK 0.069 . cgd8_4340 758 NLKNKNK|RK 0.063 . cgd8_4340 759 LKNKNKR|KN 0.196 . cgd8_4340 760 KNKNKRK|NV 0.154 . cgd8_4340 763 NKRKNVR|IR 0.098 . cgd8_4340 765 RKNVRIR|-- 0.146 . ____________________________^_________________

  • Fasta :-

    >cgd8_4340 ATGGCTTCAATTTTAAGTCAAGAAGCTGAGAAGCGGCAAGATTCTCATCCTGTGACCCTT CAATTGTCAAATCGTCTAGTCAATTTCGTTTCTGGAGGATTTTTGGCCAACAAAACAGGT ATAGAGTCTTCTTCTTACGTTTCAGATAATTCCCAGATCTCAGATAAAACACAGAAACAT ATGGACAAATTAAAAGAAAAAGAACAAATTGAAAATAATGTTCCATTAGCAAAGCCAGAA TACTATTATTTCCCTCCAGAATTACTCACTGATGCAAGAGATTTTCTTGAACCAAAAGAA ATCTCTCACTTCAGACCATATGGTAGAGGATTAGCTAATCCTGGTTGGAATACATGTTAT TTTAATTCTATTTTACAAGCATTAACTTATGCACCTTATCTTTCAATTGATTGCTTAAGG AGGAATCACCAAAAGATTTGTAAACATATGAAAGACCATTTGGTTTGTATTATGTGTATG TTTGAAGATCATGTTAATATTATGTTGGATAATACATCCAAATCTAATACAAAAAATGAC CAACCAGTAGTTTCTAGTTTTATCAAATGTGCTCAAAAATTAATATGGAAAAGATTTAGA ATTGGAATGATGCATGATGCACAAGAATTTCTAAGGTATTTCTTAGAAGCTTTACATAAA TCTTGTTTACCTAAGAATTTACAAACTGATCAAACTTTTAGGAAAATACATCCTATTGCA GCTTCAACAACTTATATTGGTCAACTATTTTGTGGATTCTTTCTTTCTAGGATTGTATGT CATAATTGTCAATATACTTCCAATACATATGACCCATTTATGGATGTACCACTTGATATT ATGGGGGTATCGAATTTAGAAAATGCTCTCAAATTATTTACTAAAATTGAATATCTTAAA GGTGAAAATAGATATATGTGTCCAAAATGTAATCAGAGATCTGATGCTTCAAAACAACTT CTAATTGAGAAACTTCCTCCACTATTAACAATTCAACTTAAGAGATTTAGTTATGTAGGA CATGGAAGTAGAAAACCTAACAAAGCTATCAATTTTTCAGATGTTTTGGATTTACAACCA TATATGTCTTCTAAGACTTATTCTGAATCTAAAGTATCTTCATCTAAATCTGAATCCTCT TATATTTACAAATTATGGGCTGTAGTATGTCATTCTGGTAATACTTTATCTTGTGGTCAT TATTATACCCATGCTAAGAGTATTGACAACAAATGGTATTGCTTTAATGATGATTACGTT AAACCAACAAGAATAGAAAATGTATTAAATGAGAATCATAAGGCTTATTTGTTGTTTTAC TATAGGAGTGATTTTAATAAATATGACTTACTTAAGGATTCTGGTGTCTCCATAGAGTCT TTAGGGAAATCTCAGATCATTACTCCTTTAGCTCCTGAAATATCATTTATAAATCTTCAA CTTAAATCAAACTCAAAATCCTCTATAAATGGTAAAAATAATAATTCTAAAGAATCATCA AATTCTGAATCAAATTTGAATGAATTTTTGGATCAATTATTAACAAATAAGTCTAAAGGA GAAAGAGATTTAGCCCAAAATCAAGATCAAGATCCAAATTTACAATTTTATCAGAACCAA CAAAATAATAACAATATTAGACTAGTTTTGAATCCAATAATAAATACGGATGTAAATAAT GAAAAATTAGATTCAAAGATTTCTATAATATCTAAAAATGAGCAAACAGAAAAGATTATT AAGGCTAAGATTTGTAATTTCAAGCTTAGATCCTTATTACTATGCGATAATTGGATTACT AGATCCAAATCAAGAAGGAATTTAGCAACCATTTTTTATCTTAAGAAATTAAAGAAACTT GGATTATCAATGAACTACTTTATTAAATCAAAATCAGGAAATTGTTCAAATGGAAAAGTT TTGATTAGTAATATTAACAAGAGTCAAATAGACACTTGGGAAGATCTTAATTTATCTAAT GATACTATTACAAGCTTGGAACAAGCTCAAAAATCTCTTCTTGCTCGTTCAAATATTAGA TCAGATTATGATAAGGAATATGATAAAGGTAAAGTTAAAAAACCTCTAAGACAGGCTATT CTAGCTTCTACAAGTTCCAATAATAATAATGAAAAGAATACTAATAGTAAATTCCAAGCT AAAAAATCAGCATTTATGGAAAAGAGCAATATAAAAGATTTGGATACCTTAAGTACTAGT GAACTATTTGATATTGCTTTTAAGAATAAAGGTAACTTAAAGAACAAAAATAAAAGAAAA AATGTTAGAATTAGATAA
  • Download Fasta

  • Fasta :-

    MASILSQEAEKRQDSHPVTLQLSNRLVNFVSGGFLANKTGIESSSYVSDNSQISDKTQKH MDKLKEKEQIENNVPLAKPEYYYFPPELLTDARDFLEPKEISHFRPYGRGLANPGWNTCY FNSILQALTYAPYLSIDCLRRNHQKICKHMKDHLVCIMCMFEDHVNIMLDNTSKSNTKND QPVVSSFIKCAQKLIWKRFRIGMMHDAQEFLRYFLEALHKSCLPKNLQTDQTFRKIHPIA ASTTYIGQLFCGFFLSRIVCHNCQYTSNTYDPFMDVPLDIMGVSNLENALKLFTKIEYLK GENRYMCPKCNQRSDASKQLLIEKLPPLLTIQLKRFSYVGHGSRKPNKAINFSDVLDLQP YMSSKTYSESKVSSSKSESSYIYKLWAVVCHSGNTLSCGHYYTHAKSIDNKWYCFNDDYV KPTRIENVLNENHKAYLLFYYRSDFNKYDLLKDSGVSIESLGKSQIITPLAPEISFINLQ LKSNSKSSINGKNNNSKESSNSESNLNEFLDQLLTNKSKGERDLAQNQDQDPNLQFYQNQ QNNNNIRLVLNPIINTDVNNEKLDSKISIISKNEQTEKIIKAKICNFKLRSLLLCDNWIT RSKSRRNLATIFYLKKLKKLGLSMNYFIKSKSGNCSNGKVLISNINKSQIDTWEDLNLSN DTITSLEQAQKSLLARSNIRSDYDKEYDKGKVKKPLRQAILASTSSNNNNEKNTNSKFQA KKSAFMEKSNIKDLDTLSTSELFDIAFKNKGNLKNKNKRKNVRIR

  • title: Active Site
  • coordinates: N113,C119,H400,D417
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
cgd8_4340374 SSKVSSSKSE0.992unspcgd8_4340374 SSKVSSSKSE0.992unspcgd8_4340374 SSKVSSSKSE0.992unspcgd8_4340375 SKVSSSKSES0.997unspcgd8_4340419 YFNDDYVKPT0.992unspcgd8_4340604 STRSKSRRNL0.997unspcgd8_4340648 SNINKSQIDT0.994unspcgd8_4340681 SSNIRSDYDK0.993unspcgd8_434054 SNSQISDKTQ0.994unspcgd8_4340373 SESKVSSSKS0.991unsp

cgd8_4340      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India