cgd8_600 | Serine aminopeptidase, S33

UniProt_ID: Q5CPW0

Computed_GO_Component_IDs:
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Curated_GO_Component_IDs:
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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	cgd8_600	SP	0.027435	0.972329	0.000236	CS pos: 23-24. VYG-EE. Pr: 0.9066

No Results

Fasta :-
>cgd8_600 MWLFKYIFAIISFAYVGIFKVYGEEQKVIPDHFYFEEGSKIQLSHGIVNYQLHKENDDGP ISVCLHCFMGTISDCSSISKNLAKNGYRALRFDFYGHGLSQYKNFGQYSVDDYVDQTMEL LEKLGLYNVTAISEEELHSSSFIPKLHVIGTSLGGFVAMRIAQRFPKHISKLVLDAPPGL LKKKVAPYLQYSIINYPLQLFANIYSPVWGCYQFMDPPSENLSSPKLDFRAKHYCKQILL TSLQLFLGINLWNNQQIYQEFSKVDVPTLFFWGAEDRLCPLSSAITILNEYVPNTKIIVY ENCKHRCSKYCKEQFVEDVIKYFNNELDQELVSMSQYYNSVHDIVHSSEKRSLPSIRGTK TDTLLEPSSIPEDTCSTSTSGSQEIAVQLASSTEENTETGSSMSSSENFDDFCKTKN
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/cgd8_600.fa Sequence name : cgd8_600 Sequence length : 417 VALUES OF COMPUTED PARAMETERS Coef20 : 4.437 CoefTot : -0.681 ChDiff : -10 ZoneTo : 23 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.600 1.947 0.257 0.774 MesoH : -0.271 0.377 -0.339 0.260 MuHd_075 : 25.949 14.558 7.002 5.033 MuHd_095 : 24.063 20.024 8.410 6.801 MuHd_100 : 22.630 18.966 7.940 6.302 MuHd_105 : 15.634 17.131 6.469 4.947 Hmax_075 : 21.100 20.213 3.882 7.473 Hmax_095 : 19.687 22.300 4.388 8.015 Hmax_100 : 20.500 26.800 5.299 8.520 Hmax_105 : 21.700 22.800 4.738 7.875 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6853 0.3147 DFMC : 0.8437 0.1563

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 417 cgd8_600 MWLFKYIFAIISFAYVGIFKVYGEEQKVIPDHFYFEEGSKIQLSHGIVNYQLHKENDDGPISVCLHCFMGTISDCSSISK 80 NLAKNGYRALRFDFYGHGLSQYKNFGQYSVDDYVDQTMELLEKLGLYNVTAISEEELHSSSFIPKLHVIGTSLGGFVAMR 160 IAQRFPKHISKLVLDAPPGLLKKKVAPYLQYSIINYPLQLFANIYSPVWGCYQFMDPPSENLSSPKLDFRAKHYCKQILL 240 TSLQLFLGINLWNNQQIYQEFSKVDVPTLFFWGAEDRLCPLSSAITILNEYVPNTKIIVYENCKHRCSKYCKEQFVEDVI 320 KYFNNELDQELVSMSQYYNSVHDIVHSSEKRSLPSIRGTKTDTLLEPSSIPEDTCSTSTSGSQEIAVQLASSTEENTETG 400 SSMSSSENFDDFCKTKN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ cgd8_600 5 --MWLFK|YI 0.085 . cgd8_600 20 AYVGIFK|VY 0.064 . cgd8_600 27 VYGEEQK|VI 0.059 . cgd8_600 40 YFEEGSK|IQ 0.052 . cgd8_600 54 VNYQLHK|EN 0.068 . cgd8_600 80 DCSSISK|NL 0.064 . cgd8_600 84 ISKNLAK|NG 0.071 . cgd8_600 88 LAKNGYR|AL 0.083 . cgd8_600 91 NGYRALR|FD 0.242 . cgd8_600 103 HGLSQYK|NF 0.064 . cgd8_600 123 TMELLEK|LG 0.054 . cgd8_600 145 SSSFIPK|LH 0.071 . cgd8_600 160 GGFVAMR|IA 0.099 . cgd8_600 164 AMRIAQR|FP 0.093 . cgd8_600 167 IAQRFPK|HI 0.233 . cgd8_600 171 FPKHISK|LV 0.085 . cgd8_600 182 APPGLLK|KK 0.053 . cgd8_600 183 PPGLLKK|KV 0.137 . cgd8_600 184 PGLLKKK|VA 0.095 . cgd8_600 226 ENLSSPK|LD 0.064 . cgd8_600 230 SPKLDFR|AK 0.095 . cgd8_600 232 KLDFRAK|HY 0.076 . cgd8_600 236 RAKHYCK|QI 0.060 . cgd8_600 263 IYQEFSK|VD 0.058 . cgd8_600 277 FWGAEDR|LC 0.065 . cgd8_600 296 EYVPNTK|II 0.056 . cgd8_600 304 IVYENCK|HR 0.057 . cgd8_600 306 YENCKHR|CS 0.104 . cgd8_600 309 CKHRCSK|YC 0.201 . cgd8_600 312 RCSKYCK|EQ 0.074 . cgd8_600 321 FVEDVIK|YF 0.078 . cgd8_600 350 IVHSSEK|RS 0.064 . cgd8_600 351 VHSSEKR|SL 0.343 . cgd8_600 357 RSLPSIR|GT 0.104 . cgd8_600 360 PSIRGTK|TD 0.107 . cgd8_600 414 NFDDFCK|TK 0.057 . cgd8_600 416 DDFCKTK|N- 0.068 . ____________________________^_________________

Fasta :-
>cgd8_600 TTAATAGAAAAAAAAAGGGGCAAAATAATTTAATAACTTTTAGTAATAGCAATATGTGGT TATTCAAATACATATTTGCAATCATAAGTTTTGCTTATGTAGGTATCTTCAAAGTTTATG GAGAAGAGCAAAAAGTCATTCCTGACCACTTTTACTTTGAAGAAGGCTCTAAAATCCAAT TATCACATGGAATAGTTAATTATCAATTACATAAAGAAAATGATGATGGACCTATTTCTG TATGTCTTCATTGTTTTATGGGTACAATTTCAGATTGTTCAAGTATTTCAAAGAATTTAG CTAAGAATGGTTATAGAGCTTTAAGATTTGATTTTTATGGGCATGGTTTGTCTCAATATA AAAATTTTGGACAATATTCTGTGGATGATTATGTTGACCAAACAATGGAATTACTTGAGA AATTGGGTCTTTACAATGTAACTGCTATTTCTGAAGAAGAGTTACATTCAAGTAGTTTTA TACCAAAGTTGCATGTAATAGGTACATCTTTGGGTGGATTTGTAGCAATGAGAATTGCTC AAAGATTTCCAAAACATATTAGCAAGTTAGTTTTAGATGCTCCTCCTGGTTTATTGAAGA AGAAAGTTGCACCTTATTTACAATATTCAATCATTAACTATCCATTACAACTTTTTGCCA ATATATACTCACCAGTTTGGGGTTGTTATCAATTTATGGATCCTCCATCTGAGAATCTTT CTTCTCCAAAGCTTGATTTTAGAGCAAAGCACTATTGTAAACAAATACTTTTAACATCTC TACAACTATTTTTGGGAATTAATTTATGGAATAATCAACAAATTTATCAAGAATTTAGTA AAGTCGATGTACCAACTCTTTTTTTCTGGGGAGCTGAAGACAGATTATGCCCACTTTCTT CAGCCATTACTATTCTAAATGAATATGTACCAAACACAAAGATTATTGTTTATGAGAATT GTAAGCATAGATGCTCTAAATATTGTAAAGAACAATTTGTTGAAGATGTTATTAAATACT TTAACAATGAATTAGACCAAGAACTTGTGTCAATGTCACAATATTACAATTCAGTGCATG ATATAGTTCATTCTTCAGAAAAGAGATCACTTCCATCAATTAGAGGTACCAAAACAGATA CTTTATTAGAGCCTAGCTCAATACCTGAAGATACATGTTCAACAAGTACATCTGGTAGTC AAGAAATTGCAGTTCAGTTAGCATCCTCAACTGAAGAAAATACCGAGACTGGGAGTTCTA TGAGTAGTTCAGAAAATTTCGATGATTTTTGTAAAACTAAGAATTAGATAAAGATATGAG TTTAGAAAAAAAAAAAAAAAAAAAAGAAATTACCAATTTCTATCAAAATTTTAATTAGAA AGCTTCTTGCTATGAAAATGGGATATTAATCAATGAATATATTAGAATGAGTGAGAATTG GATGACACTCCTGGGAGTCCTAAATGTTAGCCTGTAATCAGTTATACTTTAATTGGTGTG CTTCATTAAATAGGATTTCCCAATACTGGAGATAGAACAATTACAGTTGAAGGAGTTAAA TTATAAAATATCTCAGAAACCCAAACTCCTTAACTGCTTCAGTAGGAGATAACGTTCTAT TCTTTTATACATTTTATTCAACCAAATTTTACTAGAATTGAAGTATTTTCTAATTAATAT TTATGTTTAACTTAAAAATATATTAATTGAAACTTGATAATATGTGAGCGAAAGCTTTTA CTTCTTAAAAAAACAGAATAAAAGTTCTTATGTTCTCTTGAAAATTTCTATTAATTATAT TTTTCCATAAACTCTTCAAGAATTTGGAAATTTCTGCATGCATGAATACATGCACTAATT TCTGGGAATGCCGCTTTTTCATAAATGACATAATTGTTACGTGTATGTTTAAAAAACAAG AAAAAATTAATTAAACATTATTTACAGAATACTAGAGTAGCA
Download Fasta

Fasta :-

MWLFKYIFAIISFAYVGIFKVYGEEQKVIPDHFYFEEGSKIQLSHGIVNYQLHKENDDGP ISVCLHCFMGTISDCSSISKNLAKNGYRALRFDFYGHGLSQYKNFGQYSVDDYVDQTMEL LEKLGLYNVTAISEEELHSSSFIPKLHVIGTSLGGFVAMRIAQRFPKHISKLVLDAPPGL LKKKVAPYLQYSIINYPLQLFANIYSPVWGCYQFMDPPSENLSSPKLDFRAKHYCKQILL TSLQLFLGINLWNNQQIYQEFSKVDVPTLFFWGAEDRLCPLSSAITILNEYVPNTKIIVY ENCKHRCSKYCKEQFVEDVIKYFNNELDQELVSMSQYYNSVHDIVHSSEKRSLPSIRGTK TDTLLEPSSIPEDTCSTSTSGSQEIAVQLASSTEENTETGSSMSSSENFDDFCKTKN

Carbon-carbon bond hydrolase

No Results

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	cgd8_600	T	379	0.563	0.077	cgd8_600	T	393	0.553	0.054	cgd8_600	T	377	0.552	0.218	cgd8_600	T	363	0.537	0.018	cgd8_600	T	374	0.537	0.032	cgd8_600	T	359	0.530	0.035	cgd8_600	T	361	0.530	0.056	cgd8_600	S	391	0.519	0.029	cgd8_600	S	369	0.504	0.067

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	cgd8_600	T	379	0.563	0.077	cgd8_600	T	393	0.553	0.054	cgd8_600	T	377	0.552	0.218	cgd8_600	T	363	0.537	0.018	cgd8_600	T	374	0.537	0.032	cgd8_600	T	359	0.530	0.035	cgd8_600	T	361	0.530	0.056	cgd8_600	S	391	0.519	0.029	cgd8_600	S	369	0.504	0.067

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	cgd8_600	392 S	QLASSTEEN	0.996	unsp	cgd8_600	392 S	QLASSTEEN	0.996	unsp	cgd8_600	392 S	QLASSTEEN	0.996	unsp	cgd8_600	402 S	ETGSSMSSS	0.992	unsp	cgd8_600	404 S	GSSMSSSEN	0.996	unsp	cgd8_600	405 S	SSMSSSENF	0.993	unsp	cgd8_600	133 S	VTAISEEEL	0.99	unsp	cgd8_600	355 S	RSLPSIRGT	0.993	unsp

cgd8_600 | Serine aminopeptidase, S33

ID's

UniProt_ID: Q5CPW0

GEO Functions

Computed_GO_Component_IDs:

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Carbon-carbon bond hydrolase

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

cgd8_600

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India