BLAST Results |PKNH_1214000.1:pep|polypeptide|PKNH_12_v2|000610917|PKNH_0411800.1:pep|polypeptide|PKNH_04_v2|000509998|PKNH_1208100.1:pep|polypeptide|PKNH_12_v2|000368849|PKNH_1134900.1:pep|polypeptide|PKNH_11_v2|001609309|PKNH_0409900.1:pep|polypeptide|PKNH_04_v2|000433943|PKNH_1205800.1:pep|polypeptide|PKNH_12_v2|000270218|PKNH_1127200.1:pep|polypeptide|PKNH_11_v2|001287708|PKNH_1019000.1:pep|polypeptide|PKNH_10_v2|000869890|
BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= PKNH_1214000.1:pep|polypeptide|PKNH_12_v2|000610917 - 000612477 (reverse strand)|1-deoxy-D-xylulose 5-phosphate reductoisomerase, putative (519 letters) Database: protseq.fasta 1775 sequences; 1,065,101 total letters Searching..................................................done ***** No hits found ******BLAST Search Results BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= PKNH_0411800.1:pep|polypeptide|PKNH_04_v2|000509998 - 000511003 (reverse strand)|2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, putative (272 letters) Database: protseq.fasta 1775 sequences; 1,065,101 total letters Searching..................................................done ***** No hits found ******BLAST Search Results BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= PKNH_1208100.1:pep|polypeptide|PKNH_12_v2|000368849 - 000369935 (reverse strand)|dihydroorotase, putative (361 letters) Database: protseq.fasta 1775 sequences; 1,065,101 total letters Searching..................................................done ***** No hits found ******BLAST Search Results BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= PKNH_1134900.1:pep|polypeptide|PKNH_11_v2|001609309 - 001610515|enoyl-acyl carrier reductase, putative (401 letters) Database: protseq.fasta 1775 sequences; 1,065,101 total letters Searching..................................................done ***** No hits found ******BLAST Search Results BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= PKNH_0409900.1:pep|polypeptide|PKNH_04_v2|000433943 - 000436800|beta-ketoacyl-acyl carrier protein synthase III precursor, putative (377 letters) Database: protseq.fasta 1775 sequences; 1,065,101 total letters Searching..................................................done ***** No hits found ******BLAST Search Results BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= PKNH_1205800.1:pep|polypeptide|PKNH_12_v2|000270218 - 000271232|beta-hydroxyacyl-ACP dehydratase, putative (241 letters) Database: protseq.fasta 1775 sequences; 1,065,101 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_816181 Trans-sialidase (Invasion) [Trypanosoma cruzi] 33 0.017 AAM47174 Rh4 (Adhesin) [Plasmodium falciparum] 30 0.15 AAM47175 Rh4 (Adhesin) [Plasmodium falciparum] 30 0.15 AAM47192 Rh4 (Adhesin) [Plasmodium falciparum] 30 0.15>PKNH_1205800.1:pep|polypeptide|PKNH_12_v2|000270218 on XP_816181 Trans-sialidase (Invasion) [Trypanosoma cruzi] Length = 967 Score = 33.1 bits (74), Expect = 0.017, Method: Composition-based stats. Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 17/131 (12%) Query: 41 TRRVVFSSQKRSSGEKY--KQRIGKKLKEKLCAVEENKNKEIDGKYISFVMSYDTGDTIN 98 T +VV + + G Y QR+G +K CA+E +KEI YI S T D Sbjct: 664 THQVVILLRNGTQGTAYVDGQRVGG---DKACALENKDSKEISHFYIGGDGS--TADNTR 718 Query: 99 IEE-----IKNVLPHRYPFLLVDKVIHIERNKKIIGIKQVSANEEFFNGHFPAKAIMPGV 153 +E + NVL + P L D++ + N K+ K A G P +AI P Sbjct: 719 SQEDVSVTVTNVLLYNRP-LDDDEITAL--NAKLSIPKASEAKT--MGGDTPPEAIKPAT 773 Query: 154 LQIEALAQLGG 164 L+ + LGG Sbjct: 774 LETGTPSSLGG 784>PKNH_1205800.1:pep|polypeptide|PKNH_12_v2|000270218 on AAM47174 Rh4 (Adhesin) [Plasmodium falciparum] Length = 1711 Score = 30.0 bits (66), Expect = 0.15, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 6/102 (5%) Query: 45 VFSSQKRSSGEKYKQRIGKKLKEKLCAVEENKNKEIDGKYISFVMSYDTGDTINIE---- 100 + + K K ++L + L ++E + K+ID K +F M Y+ I I+ Sbjct: 540 IIQNHKNKQETKLNTTTIQELLQLLKDIKEIQTKQIDTKINTFNMYYNDIQQIKIKINQN 599 Query: 101 --EIKNVLPHRYPFLLVDKVIHIERNKKIIGIKQVSANEEFF 140 EIK VLP Y + I I +N+ IK+ F Sbjct: 600 EKEIKKVLPQLYIPKNEQEYIQIYKNELKDRIKETQTKINLF 641>PKNH_1205800.1:pep|polypeptide|PKNH_12_v2|000270218 on AAM47175 Rh4 (Adhesin) [Plasmodium falciparum] Length = 1711 Score = 30.0 bits (66), Expect = 0.15, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 6/102 (5%) Query: 45 VFSSQKRSSGEKYKQRIGKKLKEKLCAVEENKNKEIDGKYISFVMSYDTGDTINIE---- 100 + + K K ++L + L ++E + K+ID K +F M Y+ I I+ Sbjct: 538 IIQNHKNKQETKLNTTTIQELLQLLKDIKEIQTKQIDTKINTFNMYYNDIQQIKIKINQN 597 Query: 101 --EIKNVLPHRYPFLLVDKVIHIERNKKIIGIKQVSANEEFF 140 EIK VLP Y + I I +N+ IK+ F Sbjct: 598 EKEIKKVLPQLYIPKNEQEYIQIYKNELKDRIKETQTKINLF 639>PKNH_1205800.1:pep|polypeptide|PKNH_12_v2|000270218 on AAM47192 Rh4 (Adhesin) [Plasmodium falciparum] Length = 1716 Score = 30.0 bits (66), Expect = 0.15, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 6/102 (5%) Query: 45 VFSSQKRSSGEKYKQRIGKKLKEKLCAVEENKNKEIDGKYISFVMSYDTGDTINIE---- 100 + + K K ++L + L ++E + K+ID K +F M Y+ I I+ Sbjct: 540 IIQNHKNKQETKLNTTTIQELLQLLKDIKEIQTKQIDTKINTFNMYYNDIQQIKIKINQN 599 Query: 101 --EIKNVLPHRYPFLLVDKVIHIERNKKIIGIKQVSANEEFF 140 EIK VLP Y + I I +N+ IK+ F Sbjct: 600 EKEIKKVLPQLYIPKNEQEYIQIYKNELKDRIKETQTKINLF 641BLAST Search Results BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= PKNH_1127200.1:pep|polypeptide|PKNH_11_v2|001287708 - 001289238|chorismate synthase, putative (509 letters) Database: protseq.fasta 1775 sequences; 1,065,101 total letters Searching..................................................done ***** No hits found ******BLAST Search Results BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= PKNH_1019000.1:pep|polypeptide|PKNH_10_v2|000869890 - 000872821|ATP-dependent DNA helicase UvrD, putative (976 letters) Database: protseq.fasta 1775 sequences; 1,065,101 total letters Searching..................................................done ***** No hits found ******Database: protseq.fasta Posted date: Dec 26, 2008 2:04 PM Number of letters in database: 1,065,101 Number of sequences in database: 1775 Lambda K H 0.319 0.135 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1775 Number of Hits to DB: 8,844,496 Number of extensions: 472594 Number of successful extensions: 1465 Number of sequences better than 1.0: 22 Number of HSP's gapped: 1444 Number of HSP's successfully gapped: 29 Length of database: 1,065,101 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 59 (27.3 bits)