Results of query sequence 1 through 3579  [Next][Last]

|M.Javanica_Scaff10079g057650|M.Javanica_Scaff1009g012004|M.Javanica_Scaff10033g057494|M.Javanica_Scaff10124g057788|M.Javanica_Scaff10060g057589|M.Javanica_Scaff10013g057441|M.Javanica_Scaff1002g011925|M.Javanica_Scaff10041g057515|M.Javanica_Scaff10053g057561|M.Javanica_Scaff1003g011928|M.Javanica_Scaff10095g057697|M.Javanica_Scaff10124g057786|M.Javanica_Scaff10124g057789|M.Javanica_Scaff10148g057884|M.Javanica_Scaff10142g057866|M.Javanica_Scaff10015g057447|M.Javanica_Scaff10014g057444|M.Javanica_Scaff10136g057833|M.Javanica_Scaff1009g012003|M.Javanica_Scaff1004g011945|M.Javanica_Scaff10049g057541|M.Javanica_Scaff10030g057488|M.Javanica_Scaff10063g057598|M.Javanica_Scaff10124g057785|M.Javanica_Scaff10099g057706|M.Javanica_Scaff10099g057705|M.Javanica_Scaff10161g057919|M.Javanica_Scaff10046g057527|M.Javanica_Scaff100g001905|M.Javanica_Scaff10160g057914|M.Javanica_Scaff10112g057752|M.Javanica_Scaff10122g057781|M.Javanica_Scaff10041g057513|M.Javanica_Scaff10019g057457|M.Javanica_Scaff1009g012001|M.Javanica_Scaff1009g011994|M.Javanica_Scaff100g001904|M.Javanica_Scaff1007g011971|M.Javanica_Scaff1010g012016|M.Javanica_Scaff10118g057768|M.Javanica_Scaff10099g057704|M.Javanica_Scaff100g001913|M.Javanica_Scaff10143g057867|M.Javanica_Scaff10052g057556|M.Javanica_Scaff10164g057929|M.Javanica_Scaff10052g057558|M.Javanica_Scaff10060g057585|M.Javanica_Scaff10018g057453|M.Javanica_Scaff10114g057757|M.Javanica_Scaff10137g057841|M.Javanica_Scaff100g001903|M.Javanica_Scaff10123g057782|M.Javanica_Scaff1003g011933|M.Javanica_Scaff10123g057784|M.Javanica_Scaff1014g012037|M.Javanica_Scaff10020g057463|M.Javanica_Scaff10215g058096|M.Javanica_Scaff10196g058035|M.Javanica_Scaff10231g058149|M.Javanica_Scaff10233g058161|M.Javanica_Scaff10204g058064|M.Javanica_Scaff1018g012063|M.Javanica_Scaff10225g058129|M.Javanica_Scaff1021g012082|M.Javanica_Scaff10308g058385|M.Javanica_Scaff10196g058036|M.Javanica_Scaff10301g058365|M.Javanica_Scaff10308g058386|M.Javanica_Scaff10251g058216|M.Javanica_Scaff10231g058152|M.Javanica_Scaff101g001937|M.Javanica_Scaff10248g058210|M.Javanica_Scaff10198g058042|M.Javanica_Scaff10168g057939|M.Javanica_Scaff10190g058013|M.Javanica_Scaff10176g057967|M.Javanica_Scaff10231g058153|M.Javanica_Scaff1023g012113|M.Javanica_Scaff10275g058282|M.Javanica_Scaff10204g058063|M.Javanica_Scaff10277g058290|M.Javanica_Scaff10279g058294|M.Javanica_Scaff10271g058274|M.Javanica_Scaff10179g057970|M.Javanica_Scaff10203g058061|M.Javanica_Scaff10225g058128|M.Javanica_Scaff10296g058348|M.Javanica_Scaff1027g012138|M.Javanica_Scaff10231g058155|M.Javanica_Scaff1023g012111|M.Javanica_Scaff10214g058091|M.Javanica_Scaff10172g057953|M.Javanica_Scaff10277g058288|M.Javanica_Scaff10197g058039|M.Javanica_Scaff1030g012166|M.Javanica_Scaff10183g057986|M.Javanica_Scaff10248g058207|M.Javanica_Scaff10201g058046|M.Javanica_Scaff10241g058189|M.Javanica_Scaff10203g058055|M.Javanica_Scaff10294g058339|M.Javanica_Scaff10266g058260|M.Javanica_Scaff10168g057938|M.Javanica_Scaff10246g058202|M.Javanica_Scaff10223g058125|M.Javanica_Scaff10296g058347|M.Javanica_Scaff10210g058074|M.Javanica_Scaff10261g058244|M.Javanica_Scaff10261g058242|M.Javanica_Scaff102g001939|M.Javanica_Scaff1024g012118|M.Javanica_Scaff104g001969|M.Javanica_Scaff1042g012262|M.Javanica_Scaff10517g059043|M.Javanica_Scaff10519g059049|M.Javanica_Scaff10438g058796|M.Javanica_Scaff1059g012428|M.Javanica_Scaff1053g012352|M.Javanica_Scaff10395g058652|M.Javanica_Scaff1038g012224|M.Javanica_Scaff10545g059136|M.Javanica_Scaff1050g012324|M.Javanica_Scaff1040g012246|M.Javanica_Scaff103g001953|M.Javanica_Scaff105g001983|M.Javanica_Scaff10547g059145|M.Javanica_Scaff1057g012399|M.Javanica_Scaff10330g058442|M.Javanica_Scaff1031g012174|M.Javanica_Scaff10413g058701|M.Javanica_Scaff10619g059351|M.Javanica_Scaff1031g012171|M.Javanica_Scaff10578g059236|M.Javanica_Scaff10370g058570|M.Javanica_Scaff10466g058874|M.Javanica_Scaff1046g012290|M.Javanica_Scaff10464g058868|M.Javanica_Scaff10463g058865|M.Javanica_Scaff10385g058621|M.Javanica_Scaff1061g012447|M.Javanica_Scaff10469g058881|M.Javanica_Scaff10478g058911|M.Javanica_Scaff1031g012173|M.Javanica_Scaff10568g059200|M.Javanica_Scaff10415g058719|M.Javanica_Scaff10620g059353|M.Javanica_Scaff104g001968|M.Javanica_Scaff10616g059341|M.Javanica_Scaff10466g058873|M.Javanica_Scaff1053g012355|M.Javanica_Scaff10608g059317|M.Javanica_Scaff1055g012372|M.Javanica_Scaff10452g058827|M.Javanica_Scaff10561g059178|M.Javanica_Scaff10559g059175|M.Javanica_Scaff10603g059305|M.Javanica_Scaff10374g058590|M.Javanica_Scaff10427g058767|M.Javanica_Scaff10331g058449|M.Javanica_Scaff10363g058541|M.Javanica_Scaff1050g012325|M.Javanica_Scaff10605g059307|M.Javanica_Scaff10584g059246|M.Javanica_Scaff10476g058903|M.Javanica_Scaff10426g058762|M.Javanica_Scaff10471g058890|M.Javanica_Scaff1058g012405|M.Javanica_Scaff1057g012394|M.Javanica_Scaff1038g012228|M.Javanica_Scaff10599g059292|M.Javanica_Scaff10611g059327|M.Javanica_Scaff10504g058990|M.Javanica_Scaff1060g012438|M.Javanica_Scaff1061g012448|M.Javanica_Scaff10615g059337|M.Javanica_Scaff10532g059082|M.Javanica_Scaff10424g058751|M.Javanica_Scaff103g001951|M.Javanica_Scaff1061g012446|M.Javanica_Scaff10504g058991|M.Javanica_Scaff10383g058611|M.Javanica_Scaff103g001950|M.Javanica_Scaff10383g058613|M.Javanica_Scaff10586g059251|M.Javanica_Scaff10621g059356|M.Javanica_Scaff10364g058544|M.Javanica_Scaff10482g058928|M.Javanica_Scaff10584g059248|M.Javanica_Scaff104g001970|M.Javanica_Scaff1052g012350|M.Javanica_Scaff1037g012221|M.Javanica_Scaff1059g012421|M.Javanica_Scaff1041g012251|M.Javanica_Scaff10618g059348|M.Javanica_Scaff10551g059152|M.Javanica_Scaff1038g012234|M.Javanica_Scaff10385g058623|M.Javanica_Scaff10477g058904|M.Javanica_Scaff1038g012226|M.Javanica_Scaff105g001982|M.Javanica_Scaff10526g059067|M.Javanica_Scaff10523g059060|M.Javanica_Scaff1059g012425|M.Javanica_Scaff10515g059033|M.Javanica_Scaff10483g058931|M.Javanica_Scaff10448g058814|M.Javanica_Scaff10357g058522|M.Javanica_Scaff10386g058625|M.Javanica_Scaff10411g058695|M.Javanica_Scaff10567g059196|M.Javanica_Scaff10366g058556|M.Javanica_Scaff10471g058888|M.Javanica_Scaff10373g058589|M.Javanica_Scaff1058g012416|M.Javanica_Scaff10592g059269|M.Javanica_Scaff10357g058523|M.Javanica_Scaff10494g058961|M.Javanica_Scaff10511g059018|M.Javanica_Scaff10944g060310|M.Javanica_Scaff10758g059763|M.Javanica_Scaff1141g013158|M.Javanica_Scaff1107g012829|M.Javanica_Scaff10g000273|M.Javanica_Scaff10694g059572|M.Javanica_Scaff11204g061127|M.Javanica_Scaff10872g060097|M.Javanica_Scaff10944g060309|M.Javanica_Scaff1078g012581|M.Javanica_Scaff1072g012535|M.Javanica_Scaff1143g013179|M.Javanica_Scaff1079g012583|M.Javanica_Scaff1101g012772|M.Javanica_Scaff10921g060240|M.Javanica_Scaff1091g012681|M.Javanica_Scaff1128g013027|M.Javanica_Scaff1128g013026|M.Javanica_Scaff11252g061261|M.Javanica_Scaff11329g061489|M.Javanica_Scaff11243g061236|M.Javanica_Scaff10622g059358|M.Javanica_Scaff1115g012899|M.Javanica_Scaff10839g059997|M.Javanica_Scaff11337g061522|M.Javanica_Scaff113g002109|M.Javanica_Scaff11230g061206|M.Javanica_Scaff1131g013064|M.Javanica_Scaff1135g013104|M.Javanica_Scaff10846g060020|M.Javanica_Scaff10g000275|M.Javanica_Scaff1078g012580|M.Javanica_Scaff112g002092|M.Javanica_Scaff10625g059375|M.Javanica_Scaff11320g061462|M.Javanica_Scaff11127g060905|M.Javanica_Scaff10919g060237|M.Javanica_Scaff10950g060326|M.Javanica_Scaff10869g060090|M.Javanica_Scaff10945g060313|M.Javanica_Scaff11014g060530|M.Javanica_Scaff11309g061433|M.Javanica_Scaff10807g059911|M.Javanica_Scaff11017g060543|M.Javanica_Scaff1099g012755|M.Javanica_Scaff11178g061063|M.Javanica_Scaff1075g012555|M.Javanica_Scaff11171g061044|M.Javanica_Scaff1131g013059|M.Javanica_Scaff10951g060330|M.Javanica_Scaff11050g060659|M.Javanica_Scaff11405g061727|M.Javanica_Scaff10g000274|M.Javanica_Scaff10873g060099|M.Javanica_Scaff1097g012738|M.Javanica_Scaff10775g059808|M.Javanica_Scaff11147g060960|M.Javanica_Scaff11314g061444|M.Javanica_Scaff11171g061045|M.Javanica_Scaff1132g013071|M.Javanica_Scaff1118g012927|M.Javanica_Scaff11089g060774|M.Javanica_Scaff11385g061673|M.Javanica_Scaff11015g060535|M.Javanica_Scaff1106g012828|M.Javanica_Scaff10948g060321|M.Javanica_Scaff10706g059609|M.Javanica_Scaff10697g059578|M.Javanica_Scaff106g001998|M.Javanica_Scaff10870g060093|M.Javanica_Scaff10740g059717|M.Javanica_Scaff1102g012786|M.Javanica_Scaff1137g013123|M.Javanica_Scaff1143g013174|M.Javanica_Scaff1135g013108|M.Javanica_Scaff11150g060977|M.Javanica_Scaff11211g061150|M.Javanica_Scaff10818g059942|M.Javanica_Scaff10647g059436|M.Javanica_Scaff10919g060234|M.Javanica_Scaff11344g061541|M.Javanica_Scaff1109g012850|M.Javanica_Scaff10796g059871|M.Javanica_Scaff11205g061130|M.Javanica_Scaff10846g060021|M.Javanica_Scaff10897g060175|M.Javanica_Scaff1124g012985|M.Javanica_Scaff10640g059423|M.Javanica_Scaff10800g059882|M.Javanica_Scaff11355g061574|M.Javanica_Scaff1073g012539|M.Javanica_Scaff11424g061786|M.Javanica_Scaff11165g061027|M.Javanica_Scaff10949g060324|M.Javanica_Scaff11230g061207|M.Javanica_Scaff11265g061297|M.Javanica_Scaff11058g060678|M.Javanica_Scaff10784g059837|M.Javanica_Scaff11004g060492|M.Javanica_Scaff112g002099|M.Javanica_Scaff1131g013056|M.Javanica_Scaff10639g059417|M.Javanica_Scaff1083g012617|M.Javanica_Scaff1133g013086|M.Javanica_Scaff110g002057|M.Javanica_Scaff11239g061228|M.Javanica_Scaff11165g061028|M.Javanica_Scaff11380g061653|M.Javanica_Scaff1138g013129|M.Javanica_Scaff11066g060702|M.Javanica_Scaff10668g059497|M.Javanica_Scaff10935g060286|M.Javanica_Scaff10837g059992|M.Javanica_Scaff11002g060486|M.Javanica_Scaff10827g059968|M.Javanica_Scaff10917g060228|M.Javanica_Scaff10844g060012|M.Javanica_Scaff10915g060220|M.Javanica_Scaff11262g061290|M.Javanica_Scaff11086g060764|M.Javanica_Scaff11407g061734|M.Javanica_Scaff11393g061695|M.Javanica_Scaff11223g061190|M.Javanica_Scaff10711g059625|M.Javanica_Scaff106g001993|M.Javanica_Scaff1113g012881|M.Javanica_Scaff11354g061568|M.Javanica_Scaff10934g060283|M.Javanica_Scaff10730g059694|M.Javanica_Scaff1110g012854|M.Javanica_Scaff10956g060341|M.Javani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_Scaff4428g034560|M.Javanica_Scaff4537g035100|M.Javanica_Scaff4880g036775|M.Javanica_Scaff6086g042382|M.Javanica_Scaff4503g034933|M.Javanica_Scaff27846g094291|M.Javanica_Scaff5391g039254|M.Javanica_Scaff6560g044486|M.Javanica_Scaff6966g046187|M.Javanica_Scaff7817g049597|M.Javanica_Scaff779g009815|M.Javanica_Scaff8075g050598|M.Javanica_Scaff3834g031446|M.Javanica_Scaff2670g024477|M.Javanica_Scaff3033g026753|M.Javanica_Scaff6560g044487|M.Javanica_Scaff5054g037595|M.Javanica_Scaff3544g029730|M.Javanica_Scaff5126g037971|M.Javanica_Scaff5103g037841|M.Javanica_Scaff8024g050384|M.Javanica_Scaff4976g037211|M.Javanica_Scaff498g006940|M.Javanica_Scaff2682g024548|M.Javanica_Scaff677g008806|M.Javanica_Scaff6158g042719|M.Javanica_Scaff549g007492|M.Javanica_Scaff4850g036638|M.Javanica_Scaff3616g030156|M.Javanica_Scaff403g005854|M.Javanica_Scaff25558g091087|M.Javanica_Scaff4381g034312|M.Javanica_Scaff2778g025155|M.Javanica_Scaff4643g035635|M.Javanica_Scaff5901g041575|M.Javanica_Scaff4369g034245|M.Javanica_Scaff7939g050060|M.Javanica_Scaff29639g096574|M.Javanica_Scaff6263g043169|M.Javanica_Scaff6927g046044|M.Javanica_Scaff5845g041308|M.Javanica_Scaff5774g040980|M.Javanica_Scaff5785g041038|M.Javanica_Scaff808g010127|M.Javanica_Scaff7791g049481|M.Javanica_Scaff2708g024733|M.Javanica_Scaff30301g097351|M.Javanica_Scaff2662g024412|M.Javanica_Scaff6734g045216|M.Javanica_Scaff36g000832|M.Javanica_Scaff30145g097161|M.Javanica_Scaff6311g043369|M.Javanica_Scaff5743g040828|M.Javanica_Scaff4055g032634|M.Javanica_Scaff558g007588|M.Javanica_Scaff3746g030939|M.Javanica_Scaff6104g042470|M.Javanica_Scaff606g008093|M.Javanica_Scaff4710g035965|M.Javanica_Scaff335g005040|M.Javanica_Scaff3307g028408|M.Javanica_Scaff2929g026135|M.Javanica_Scaff2800g025300|M.Javanica_Scaff7648g048913|M.Javanica_Scaff3203g027781|M.Javanica_Scaff6602g044660|M.Javanica_Scaff587g007888|M.Javanica_Scaff3659g030417|M.Javanica_Scaff4202g033376|M.Javanica_Scaff7834g049647|M.Javanica_Scaff4352g034151|M.Javanica_Scaff25250g090623|M.Javanica_Scaff3907g031844|M.Javanica_Scaff26199g092017|M.Javanica_Scaff826g010305|M.Javanica_Scaff4193g033332|M.Javanica_Scaff7583g048671|M.Javanica_Scaff5186g038263|M.Javanica_Scaff26090g091874|M.Javanica_Scaff4278g033756|M.Javanica_Scaff3309g028412|M.Javanica_Scaff4767g036209|

BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10079g057650
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1009g012004
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10033g057494
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10124g057788
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10060g057589
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10013g057441
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1002g011925
         (838 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10041g057515
         (209 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10053g057561
         (149 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1003g011928
         (797 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10095g057697
         (144 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10124g057786
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10124g057789
         (549 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10148g057884
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10142g057866
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10015g057447
         (264 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10014g057444
         (1549 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10136g057833
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1009g012003
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1004g011945
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10049g057541
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10030g057488
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10063g057598
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10124g057785
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10099g057706
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10099g057705
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10161g057919
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10046g057527
         (205 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff100g001905
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10160g057914
         (201 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10112g057752
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10122g057781
         (237 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10041g057513
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10019g057457
         (467 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1009g012001
         (165 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1009g011994
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff100g001904
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1007g011971
         (192 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1010g012016
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10118g057768
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10099g057704
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff100g001913
         (230 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10143g057867
         (128 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10052g057556
         (155 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10164g057929
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10052g057558
         (176 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10060g057585
         (237 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10018g057453
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10114g057757
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10137g057841
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff100g001903
         (189 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10123g057782
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1003g011933
         (874 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10123g057784
         (323 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1014g012037
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10020g057463
         (408 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10215g058096
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10196g058035
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10231g058149
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10233g058161
         (191 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10204g058064
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1018g012063
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10225g058129
         (113 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1021g012082
         (474 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10308g058385
         (254 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10196g058036
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10301g058365
         (368 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10308g058386
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10251g058216
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10231g058152
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff101g001937
         (152 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10248g058210
         (560 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10198g058042
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10168g057939
         (581 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10190g058013
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10176g057967
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10231g058153
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1023g012113
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10275g058282
         (406 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10204g058063
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10277g058290
         (613 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10279g058294
         (438 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10271g058274
         (194 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10179g057970
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10203g058061
         (152 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10225g058128
         (377 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10296g058348
         (176 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1027g012138
         (456 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10231g058155
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1023g012111
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10214g058091
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10172g057953
         (120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10277g058288
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10197g058039
         (163 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1030g012166
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10183g057986
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10248g058207
         (327 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10201g058046
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10241g058189
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10203g058055
         (245 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10294g058339
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10266g058260
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10168g057938
         (616 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10246g058202
         (281 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10223g058125
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10296g058347
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10210g058074
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10261g058244
         (208 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10261g058242
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff102g001939
         (317 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1024g012118
         (258 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff104g001969
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1042g012262
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10517g059043
         (663 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10519g059049
         (238 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10438g058796
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1059g012428
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1053g012352
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10395g058652
         (660 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1038g012224
         (275 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10545g059136
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1050g012324
         (264 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1040g012246
         (693 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff103g001953
         (218 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff105g001983
         (208 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10547g059145
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1057g012399
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10330g058442
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1031g012174
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10413g058701
         (325 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10619g059351
         (172 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1031g012171
         (532 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10578g059236
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10370g058570
         (178 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10466g058874
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1046g012290
         (265 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10464g058868
         (259 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10463g058865
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10385g058621
         (300 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1061g012447
         (268 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10469g058881
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10478g058911
         (283 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1031g012173
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10568g059200
         (195 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10415g058719
         (287 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10620g059353
         (449 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff104g001968
         (131 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10616g059341
         (398 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10466g058873
         (199 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1053g012355
         (276 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10608g059317
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1055g012372
         (587 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10452g058827
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10561g059178
         (627 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10559g059175
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10603g059305
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10374g058590
         (489 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10427g058767
         (313 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10331g058449
         (121 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10363g058541
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1050g012325
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10605g059307
         (328 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10584g059246
         (223 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10476g058903
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10426g058762
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10471g058890
         (203 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1058g012405
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1057g012394
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1038g012228
         (191 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10599g059292
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10611g059327
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10504g058990
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1060g012438
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1061g012448
         (226 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10615g059337
         (159 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10532g059082
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10424g058751
         (539 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff103g001951
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1061g012446
         (322 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10504g058991
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10383g058611
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff103g001950
         (335 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10383g058613
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10586g059251
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10621g059356
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10364g058544
         (167 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10482g058928
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10584g059248
         (530 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff104g001970
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1052g012350
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1037g012221
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1059g012421
         (672 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1041g012251
         (146 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10618g059348
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10551g059152
         (363 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1038g012234
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10385g058623
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10477g058904
         (265 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1038g012226
         (301 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff105g001982
         (113 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10526g059067
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10523g059060
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1059g012425
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10515g059033
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10483g058931
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10448g058814
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10357g058522
         (272 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10386g058625
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10411g058695
         (207 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10567g059196
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10366g058556
         (199 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10471g058888
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10373g058589
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1058g012416
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10592g059269
         (556 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10357g058523
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10494g058961
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10511g059018
         (224 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10944g060310
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10758g059763
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1141g013158
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1107g012829
         (272 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10g000273
         (320 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10694g059572
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11204g061127
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10872g060097
         (168 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10944g060309
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1078g012581
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1072g012535
         (157 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1143g013179
         (218 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1079g012583
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1101g012772
         (187 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10921g060240
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1091g012681
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1128g013027
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1128g013026
         (191 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11252g061261
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11329g061489
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11243g061236
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10622g059358
         (166 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1115g012899
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10839g059997
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11337g061522
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff113g002109
         (1274 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11230g061206
         (405 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1131g013064
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1135g013104
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10846g060020
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10g000275
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1078g012580
         (277 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff112g002092
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10625g059375
         (396 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11320g061462
         (238 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]            234   2e-79
BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]             204   1e-67
BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]              116   2e-33
XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]           116   3e-33
AAB86482  RabA  (Invasion)  [Entamoeba histolytica]                    95   6e-25
>M.Javanica_Scaff11320g061462 on XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]
          Length = 206

 Score =  234 bits (597), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 115/201 (57%), Positives = 148/201 (73%), Gaps = 3/201 (1%)

Query: 39  LSEILDGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDITIDDRVVTMQIWDTAGQE 98
           L  I+ GDSGVGKTSLMNQ+VN ++S+ YKATIGADFLTKD+ +D+  VTMQIWDTAG E
Sbjct: 8   LKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIWDTAGNE 67

Query: 99  RFQSLGVAFYRGADCCVLVYDLTYAPSFKNLESWRDEFLVQASPRDPENFPFVLLGNKVD 158
           RFQSLGVAFYRGADCC L YD+    +F++L +WR+EFLVQASP++ + FPFV+LGNKVD
Sbjct: 68  RFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVVLGNKVD 127

Query: 159 N-EAARAIHAKRAEGWCQSKCNMPYFEVSAKEALNVDEAFMEIAKAALARDAQETENPSF 217
             E +     K+AE WC    N+P+FE SAK A NVD AF  IA+AA+A+   +T+    
Sbjct: 128 TYEGSPDAIKKKAEQWCSEHFNIPFFETSAKNATNVDAAFQSIAQAAIAQKGTDTD-IYV 186

Query: 218 PDQINLRAPSTSQQRQNSCNC 238
            +Q+N+  P+   Q+ + C C
Sbjct: 187 MNQVNIDQPAPQAQKSD-CPC 206
>M.Javanica_Scaff11320g061462 on BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]
          Length = 207

 Score =  204 bits (519), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 105/199 (52%), Positives = 137/199 (68%), Gaps = 7/199 (3%)

Query: 42  ILDGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDITIDDRVVTMQIWDTAGQERFQ 101
           I+ GDSGVGKTSL+NQYV K+FS+QYKATIGADF+TKDITI+D+ +++QIWDTAG ERF 
Sbjct: 14  IILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQISLQIWDTAGHERFA 73

Query: 102 SLGVAFYRGADCCVLVYDLTYAPSFKNLESWRDEFLVQASPRDPENFPFVLLGNKVDNEA 161
           S G AFYRGAD C+LV D+T A SF++LE WR EF+   +P DPE+FP+V++ NK D E 
Sbjct: 74  SFGTAFYRGADVCMLVCDVTVAESFEHLEVWRKEFISGGNPSDPESFPYVVIANKNDCEP 133

Query: 162 A-RAIHAKRAEGWCQSKCNMPYFEVSAKEALNVDEAFMEIAKAALARDAQETENPSFPD- 219
           A RA+ + +   WC +     +FE SAK   NVD AF + A     R  +  +    P  
Sbjct: 134 ANRAVSSDQLRQWCVTN-GYEFFECSAKTGWNVDSAFTKAATLVAMRQKEVPQPEPLPSV 192

Query: 220 QINLRAPSTSQQRQNSCNC 238
           QI+L+   T    Q+SC+C
Sbjct: 193 QIDLQPDKT----QSSCSC 207
>M.Javanica_Scaff11320g061462 on BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]
          Length = 195

 Score =  116 bits (291), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 102/175 (58%), Gaps = 9/175 (5%)

Query: 42  ILDGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDITIDDRVVTMQIWDTAGQERFQ 101
           +L GDS VGK+S++ +     +    + TIGA FLTK + +D   +  +IWDTAGQER+ 
Sbjct: 12  VLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGETIKFEIWDTAGQERYH 71

Query: 102 SLGVAFYRGADCCVLVYDLTYAPSFKNLESWRDEFLVQASPRDPENFPFV-LLGNKVDNE 160
           SL   +YRG++  ++VYD+T   SF   + W DE       R   N   + L+GNK D +
Sbjct: 72  SLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDEL------RGSGNEAIIFLVGNKCDLD 125

Query: 161 AARAIHAKRAEGWCQSKCNMPYFEVSAKEALNVDEAFMEIAKAALARDAQETENP 215
            +R I  + AEG+ +S  ++ Y E SAK  +NV+E F +IA+  L R+ +   +P
Sbjct: 126 NSRVITKEEAEGYARS-LSIDYIETSAKANINVNELFDQIAR-KLPRNEKGLIDP 178
>M.Javanica_Scaff11320g061462 on XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]
          Length = 211

 Score =  116 bits (291), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 102/173 (58%), Gaps = 7/173 (4%)

Query: 30  SKNFSFLCKLSEILDGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDITIDDRVVTM 89
           S+ + FL K+  +L G+SGVGK++L+ ++    F    ++TIG +F T+ I   D+ +  
Sbjct: 4   SEEYDFLYKI--VLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRA 61

Query: 90  QIWDTAGQERFQSLGVAFYRGADCCVLVYDLTYAPSFKNLESWRDEFLVQASPRDPENFP 149
           QIWDTAGQER++++  A+YRGA   ++VYD+T   SF+++E W  E    A  +  +   
Sbjct: 62  QIWDTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQ--- 118

Query: 150 FVLLGNKVDNEAARAIHAKRAEGWCQSKCNMPYFEVSAKEALNVDEAFMEIAK 202
            +++GNK D    R +     E   + K N  +FE SA +  NV+EAFM + K
Sbjct: 119 -MVIGNKCDLSQTREVQTSEGEELAK-KNNAFFFETSALDGSNVEEAFMTLLK 169
>M.Javanica_Scaff11320g061462 on AAB86482  RabA  (Invasion)  [Entamoeba histolytica]
          Length = 219

 Score = 95.1 bits (235), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 10/198 (5%)

Query: 43  LDGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDITIDDRVVTMQIWDTAGQERFQS 102
           L GD GVGKT+L+ ++    ++  Y ATIG +   K + +D ++  +Q+WDTAGQE++ S
Sbjct: 30  LIGDVGVGKTALIQRFCFGTYTEDYDATIGIETCDKSVNLDGKMYQLQLWDTAGQEKYHS 89

Query: 103 LGVAFYRGADCCVLVYDLTYAPSFKNLESWRDEFLVQASPRDPENFPFVLLGNKVDNEAA 162
           L   +++     +LV+ +    SF + + W D F   +S       P +L+GNK D   +
Sbjct: 90  LVRLYFKDIKGVLLVFQIDRQESFDHCKDWLDLFY--SSISSGFTPPVLLVGNKCDLIGS 147

Query: 163 RAIHAKRAEGWCQSKCNMPYFEVSAKEALNVDEAFMEIAKAALARDAQETENPSF--PDQ 220
               +K +     S+  + Y E S+KE  NV EAF ++ ++ +         P F  P +
Sbjct: 148 STRVSKESVDRFVSENGLEYIETSSKENTNVQEAFSQLLRSIINL------KPIFVDPGE 201

Query: 221 INLRAPSTSQQRQNSCNC 238
             ++    ++     C C
Sbjct: 202 EEVKITQQTEDTDGGCVC 219
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11127g060905
         (222 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10919g060237
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10950g060326
         (266 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10869g060090
         (322 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10945g060313
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11014g060530
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11309g061433
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10807g059911
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11017g060543
         (149 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1099g012755
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11178g061063
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1075g012555
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11171g061044
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1131g013059
         (161 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10951g060330
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11050g060659
         (261 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11405g061727
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10g000274
         (120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10873g060099
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1097g012738
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10775g059808
         (889 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11147g060960
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11314g061444
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11171g061045
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1132g013071
         (267 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1118g012927
         (257 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11089g060774
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11385g061673
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11015g060535
         (410 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]          112   1e-28
ABC02174  Falstatin  (Others)  [Plasmodium falciparum]                 62   2e-11
XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium falc...    62   2e-11
P92132  CP2  (Cysteine protease)  [Giardia duodenalis]                 59   6e-11
CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]        58   3e-10
PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]    54   1e-08
EAN83733  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]          44   6e-07
CAA38278  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]          44   7e-07
XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]           46   1e-06
AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    46   2e-06
XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium falc...    45   4e-06
XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]           42   4e-05
>M.Javanica_Scaff11015g060535 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score =  112 bits (279), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 118/258 (45%), Gaps = 46/258 (17%)

Query: 161 FSCSEKWTGCAPIINRVHHQGRCASCWAIAPSTVYTDRVCIERAKKKQSTPNNASYIFSA 220
           F  +E W  C P I ++  Q  C SCWA+A ++  +DR C     +            SA
Sbjct: 98  FDSAEAWPNC-PTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVH--------ISA 148

Query: 221 LDILSC-SDAGD-CVEGSAYKAWRWLESKGVCTGGDNVNKGGCKPYPF--------TKSG 270
            D+L+C SD GD C  G   +AW +  S G+ +         C+PYPF        +K+G
Sbjct: 149 GDLLACCSDCGDGCNGGDPDRAWAYFSSTGLVSDY-------CQPYPFPHCSHHSKSKNG 201

Query: 271 -------NAATPKCDSSCTASWPTHYFNDKRHISRLYAWGGNSITAQN-IIKELEANGPV 322
                  N  TPKC+ +C    PT    + R      +W   ++  ++  ++EL   GP 
Sbjct: 202 YPPCSQFNFDTPKCNYTCDD--PTIPVVNYR------SWTSYALQGEDDYMRELFFRGPF 253

Query: 323 VVILKAYSDLYAHIGGVYHKSQDAVFRTNHVVSIVGHGIEVCDKDYPYWIIKNSWGTEFA 382
            V    Y D  A+  GVYH      +   H V +VG G        PYW I NSW TE+ 
Sbjct: 254 EVAFDVYEDFIAYNSGVYHHVS-GQYLGGHAVRLVGWGTS---NGVPYWKIANSWNTEWG 309

Query: 383 ESGFFKIRRGVNECDIEN 400
             G+F IRRG +EC IE+
Sbjct: 310 MDGYFLIRRGSSECGIED 327
>M.Javanica_Scaff11015g060535 on ABC02174  Falstatin  (Others)  [Plasmodium falciparum]
          Length = 492

 Score = 62.0 bits (149), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 110/282 (39%), Gaps = 49/282 (17%)

Query: 122 IDVNGEGVFDGESPPDPIEDNKEDEHPRDKRADCIQKNVFSCSEKWTGCAPIINRVHHQG 181
           +++   G F   SPP   E N ED   + K AD     +        G  P    V  Q 
Sbjct: 233 LNLKTHGPFKTLSPPVSYEANYEDVIKKYKPADAKLDRIAYDWRLHGGVTP----VKDQA 288

Query: 182 RCASCWAIAPSTVYTDRVCIERAKKKQSTPNNASYIFSALDILSCSDAGD-CVEGSAYKA 240
            C SCWA +       +  I +          A ++FS  +++ CS   + C  G    A
Sbjct: 289 LCGSCWAFSSVGSVESQYAIRKK---------ALFLFSEQELVDCSVKNNGCYGGYITNA 339

Query: 241 WR-WLESKGVCTGGDNVNKGGCKPYPFTKSGNAATPKCDSSCTASWPTHYFNDKRHISRL 299
           +   ++  G+C+  D         YP+  +          +C        +  K ++S  
Sbjct: 340 FDDMIDLGGLCSQDD---------YPYVSN-------LPETCNLKRCNERYTIKSYVS-- 381

Query: 300 YAWGGNSITAQNIIKELEANGPVVVILKAYSDLYAHIGGVYHKSQDAVFRTNHVVSIVGH 359
                  I      + L   GP+ + + A  D   + GG Y     A    NH V +VG+
Sbjct: 382 -------IPDDKFKEALRYLGPISISIAASDDFAFYRGGFYDGECGAA--PNHAVILVGY 432

Query: 360 GI-EVCDKD------YPYWIIKNSWGTEFAESGFFKIRRGVN 394
           G+ ++ ++D      + Y+IIKNSWG+++ E G+  +    N
Sbjct: 433 GMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDEN 474
>M.Javanica_Scaff11015g060535 on XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 492

 Score = 62.0 bits (149), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 110/282 (39%), Gaps = 49/282 (17%)

Query: 122 IDVNGEGVFDGESPPDPIEDNKEDEHPRDKRADCIQKNVFSCSEKWTGCAPIINRVHHQG 181
           +++   G F   SPP   E N ED   + K AD     +        G  P    V  Q 
Sbjct: 233 LNLKTHGPFKTLSPPVSYEANYEDVIKKYKPADAKLDRIAYDWRLHGGVTP----VKDQA 288

Query: 182 RCASCWAIAPSTVYTDRVCIERAKKKQSTPNNASYIFSALDILSCSDAGD-CVEGSAYKA 240
            C SCWA +       +  I +          A ++FS  +++ CS   + C  G    A
Sbjct: 289 LCGSCWAFSSVGSVESQYAIRKK---------ALFLFSEQELVDCSVKNNGCYGGYITNA 339

Query: 241 WR-WLESKGVCTGGDNVNKGGCKPYPFTKSGNAATPKCDSSCTASWPTHYFNDKRHISRL 299
           +   ++  G+C+  D         YP+  +          +C        +  K ++S  
Sbjct: 340 FDDMIDLGGLCSQDD---------YPYVSN-------LPETCNLKRCNERYTIKSYVS-- 381

Query: 300 YAWGGNSITAQNIIKELEANGPVVVILKAYSDLYAHIGGVYHKSQDAVFRTNHVVSIVGH 359
                  I      + L   GP+ + + A  D   + GG Y     A    NH V +VG+
Sbjct: 382 -------IPDDKFKEALRYLGPISISIAASDDFAFYRGGFYDGECGAA--PNHAVILVGY 432

Query: 360 GI-EVCDKD------YPYWIIKNSWGTEFAESGFFKIRRGVN 394
           G+ ++ ++D      + Y+IIKNSWG+++ E G+  +    N
Sbjct: 433 GMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDEN 474
>M.Javanica_Scaff11015g060535 on P92132  CP2  (Cysteine protease)  [Giardia duodenalis]
          Length = 255

 Score = 58.9 bits (141), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 82/205 (40%), Gaps = 31/205 (15%)

Query: 161 FSCSEKWTGCAPIINRVHHQGRCASCWAIAPSTVYTDRVCIERAKKKQSTPNNASYIFSA 220
           F   E++  C P    V  QG C SCWA +    + DR C+    KK          +S 
Sbjct: 79  FDFREEYPHCIP---EVVDQGGCGSCWAFSSVATFGDRRCVAGLDKKPVK-------YSP 128

Query: 221 LDILSCSDAGD--CVEGSAYKAWRWLESKGVCTGGDNVNKGGCKPYPFTKSGNAAT-PKC 277
             ++SC D GD  C  G     W++L   G  T         C PY   KSG+      C
Sbjct: 129 QYVVSC-DHGDMACNGGWLPNVWKFLTKTGTTT-------DECVPY---KSGSTTLRGTC 177

Query: 278 DSSCTASWPTHYFNDKRHISRLYAWGGNSITAQNIIKELEANGPVVVILKAYSDLYAHIG 337
            + C         + K H++   ++    +    ++K L  +GP+ V    +SD   +  
Sbjct: 178 PTKCADG------SSKVHLATATSYKDYGLDIPAMMKALSTSGPLQVAFLVHSDFMYYES 231

Query: 338 GVYHKSQDAVFRTNHVVSIVGHGIE 362
           GVY  +        H V +VG+G +
Sbjct: 232 GVYQHTY-GYMEGGHAVEMVGYGTD 255
>M.Javanica_Scaff11015g060535 on CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 450

 Score = 58.2 bits (139), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 40/227 (17%)

Query: 174 INRVHHQGRCASCWAIAPSTVYTDRVCIERAKKKQSTPNNASYIFSALDILSCS--DAGD 231
           +  V  QG+C SCWA +          I   + +     N     S   ++SC   D G 
Sbjct: 138 VTPVKDQGQCGSCWAFST---------IGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFG- 187

Query: 232 CVEGSAYKAWRWLESKGVCTGGDNVNKGGCKPYPFTKSGNAATPKCDSSC--TASWPTHY 289
           C  G    A+ W+    V + G NV      PY    SGN   P+C  +     +  T +
Sbjct: 188 CGGGLMDNAFNWI----VNSNGGNVFTEASYPY---VSGNGEQPQCQMNGHEIGAAITDH 240

Query: 290 FNDKRHISRLYAWGGNSITAQNIIKELEANGPVVVILKAYSDLYAHIGGVYHKSQDAVFR 349
            +  +    + A+             L  NGP+ + + A S    + GG+         +
Sbjct: 241 VDLPQDEDAIAAY-------------LAENGPLAIAVDATS-FMDYNGGILTSCTSE--Q 284

Query: 350 TNHVVSIVGHGIEVCDKDYPYWIIKNSWGTEFAESGFFKIRRGVNEC 396
            +H V +VG+       + PYWIIKNSW   + E G+ +I +G N+C
Sbjct: 285 LDHGVLLVGYND---SSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQC 328
>M.Javanica_Scaff11015g060535 on PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]
          Length = 569

 Score = 53.5 bits (127), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 99/245 (40%), Gaps = 59/245 (24%)

Query: 173 IINRVHHQGRCASCWAIAPSTVYTDRVCIERAKKKQSTPNNASYIFSALDILSCS-DAGD 231
           I++    QG C SCWA A S    + V  ++ K   S        FS  +++ CS D   
Sbjct: 344 IVHEPKDQGLCGSCWAFA-SVGNIESVFAKKNKNILS--------FSEQEVVDCSKDNFG 394

Query: 232 CVEGSAYKAWRWLESKGVCTGGDNVNKGGCKPYPFTKSGNAATPKCDSSCTASWPTHYFN 291
           C  G  + ++ ++    +C G +         Y +         K D  C        + 
Sbjct: 395 CDGGHPFYSFLYVLQNELCLGDE---------YKYK-------AKDDMFCLN------YR 432

Query: 292 DKRHISRLYAWGGNSITAQNIIKELEANGPVVVILKAYSDLYAHIGGVYHKSQDAVFRTN 351
            KR +S L + G  ++    +I  L   GP+ V +   +D  A+  GVY+ +       N
Sbjct: 433 CKRKVS-LSSIG--AVKENQLILALNEVGPLSVNVGVNNDFVAYSEGVYNGTCSE--ELN 487

Query: 352 HVVSIVGHG-IEVCDKDYP---------------------YWIIKNSWGTEFAESGFFKI 389
           H V +VG+G +E    +Y                      YWIIKNSW  ++ E+GF ++
Sbjct: 488 HSVLLVGYGQVEKTKLNYNNKIQTYNTKENSNQPDDNIIYYWIIKNSWSKKWGENGFMRL 547

Query: 390 RRGVN 394
            R  N
Sbjct: 548 SRNKN 552
>M.Javanica_Scaff11015g060535 on EAN83733  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]
          Length = 70

 Score = 43.5 bits (101), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 24/31 (77%)

Query: 369 PYWIIKNSWGTEFAESGFFKIRRGVNECDIE 399
           P+WIIKNSW T++ E G+ +I +G N+C ++
Sbjct: 12  PHWIIKNSWTTQWGEDGYIRIAKGSNQCLVK 42
>M.Javanica_Scaff11015g060535 on CAA38278  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]
          Length = 70

 Score = 43.5 bits (101), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 23/31 (74%)

Query: 369 PYWIIKNSWGTEFAESGFFKIRRGVNECDIE 399
           PYWIIKNSW  ++ E G+ +I +G N+C ++
Sbjct: 4   PYWIIKNSWTAQWGEDGYIRIAKGSNQCLVK 34
>M.Javanica_Scaff11015g060535 on XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]
          Length = 318

 Score = 46.2 bits (108), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 112/280 (40%), Gaps = 77/280 (27%)

Query: 141 DNKEDEHPRDKRADCIQKNVFSCSEKWTGCAPIINRVHHQGRCASCWAIAPSTVYTDRVC 200
           D + +E   D R D  +    S   +  G  P I     Q  C SC++ A       R+ 
Sbjct: 81  DKQHEEIVYDSRGDVPE----SVDWRAKGKVPAI---RDQASCGSCYSFASVAAIEGRLL 133

Query: 201 IERAKKKQSTPNNASYIFSALDILSCS-DAGD--CVEGSAYKAWRWLESKGVCTGGDNVN 257
           +  A  K+ T ++     S   ++ CS   G+  C  GS   ++R+++  G+    D   
Sbjct: 134 V--AGSKKFTVDDLD--LSEQQLVDCSVSVGNKGCNGGSLLLSFRYVKLNGIMQEKD--- 186

Query: 258 KGGCKPYPFTKSGNAATPKCDSSCTASWPTHYFNDKRHISRLYAWGGNSITAQNIIK--- 314
                 YP+  +        + +CT         DK+ ++         IT Q +++   
Sbjct: 187 ------YPYVAA--------EETCTY--------DKKKVAV-------KITGQKLVRPGS 217

Query: 315 ---------------ELEANGPVVVILKAYSDLYAHIGGVYHKSQDAVFRTNHVVSIVGH 359
                           ++A+G    + K+         G+Y+  + +  + NH V++VG+
Sbjct: 218 EKALMRAAAEGPVAAAIDASGVKFQLYKS---------GIYNSKECSSTQLNHGVAVVGY 268

Query: 360 GIEVCDKDYPYWIIKNSWGTEFAESGFFKIRRGV-NECDI 398
           G +       YWI++NSWGT + + G+  + R   N+C I
Sbjct: 269 GTQ---NGTEYWIVRNSWGTIWGDQGYVLMSRNKNNQCGI 305
>M.Javanica_Scaff11015g060535 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 46.2 bits (108), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 90/233 (38%), Gaps = 51/233 (21%)

Query: 168 TGCAPIINRVHHQGRCASCWAIAPSTVYTDRVCIERAKKKQSTPNNASYIFSALDILSCS 227
           +G  P    V  Q  C SCWA +          I   + + +   N     S  +++ CS
Sbjct: 271 SGVTP----VKDQKNCGSCWAFS---------SIGSVESQYAIRKNKLITLSEQELVDCS 317

Query: 228 DAG-DCVEGSAYKAWR-WLESKGVCTGGDNVNKGGCKPYPFTKSGNAATPKCDSSCTASW 285
                C  G    A+   +E  G+CT  D         YP+     +  P     C    
Sbjct: 318 FKNYGCNGGLINNAFEDMIELGGICTDDD---------YPYV----SDAPNL---CNIDR 361

Query: 286 PTHYFNDKRHISRLYAWGGNSITAQNIIKE-LEANGPVVVILKAYSDLYAHIGGVYHKSQ 344
            T  +  K ++S             N +KE L   GP+ + +    D   +  G++    
Sbjct: 362 CTEKYGIKNYLS----------VPDNKLKEALRFLGPISISVAVSDDFAFYKEGIF--DG 409

Query: 345 DAVFRTNHVVSIVGHGI-EVCD------KDYPYWIIKNSWGTEFAESGFFKIR 390
           +   + NH V +VG G+ E+ +      + + Y+IIKNSWG ++ E GF  I 
Sbjct: 410 ECGDQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIE 462
>M.Javanica_Scaff11015g060535 on XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 482

 Score = 45.1 bits (105), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 89/233 (38%), Gaps = 51/233 (21%)

Query: 168 TGCAPIINRVHHQGRCASCWAIAPSTVYTDRVCIERAKKKQSTPNNASYIFSALDILSCS 227
           +G  P    V  Q  C SCWA +          I   + + +   N     S  +++ CS
Sbjct: 269 SGVTP----VKDQKNCGSCWAFS---------SIGSVESQYAIRKNKLITLSEQELVDCS 315

Query: 228 DAG-DCVEGSAYKAWR-WLESKGVCTGGDNVNKGGCKPYPFTKSGNAATPKCDSSCTASW 285
                C  G    A+   +E  G+CT  D         YP+     +  P     C    
Sbjct: 316 FKNYGCNGGLINNAFEDMIELGGICTDDD---------YPYV----SDAPNL---CNIDR 359

Query: 286 PTHYFNDKRHISRLYAWGGNSITAQNIIKE-LEANGPVVVILKAYSDLYAHIGGVYHKSQ 344
            T  +  K ++S             N +KE L   GP+ + +    D   +  G++    
Sbjct: 360 CTEKYGIKNYLS----------VPDNKLKEALRFLGPISISIAVSDDFPFYKEGIF--DG 407

Query: 345 DAVFRTNHVVSIVGHGI-EVCD------KDYPYWIIKNSWGTEFAESGFFKIR 390
           +     NH V +VG G+ E+ +      + + Y+IIKNSWG ++ E GF  I 
Sbjct: 408 ECGDELNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIE 460
>M.Javanica_Scaff11015g060535 on XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 41.6 bits (96), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 89/228 (39%), Gaps = 40/228 (17%)

Query: 177 VHHQGRCASCWAIAPSTVYTDRVCIERAKKKQSTPNNASYIFSALDILSCS---DAGDCV 233
           +  QG C SC+          R+ IE+    ++         S   ++ C+       C 
Sbjct: 109 IRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLD------LSEEHMVQCTREDGNNGCN 162

Query: 234 EGSAYKAWRWLESKGVCTGGDNVNKGGCKPYPFTKSGNAATPKCDSSCTASWPTHYFNDK 293
            G     + ++   G+    D         YP+T S        DS+C +        D 
Sbjct: 163 GGLGSNVYNYIMENGIAKESD---------YPYTGS--------DSTCRS--------DV 197

Query: 294 RHISRLYAWGGNSITAQNIIKELEANGPVVVILKAYS-DLYAHIGGVYHKSQ--DAVFRT 350
           +  +++ ++   +   +  +K   + G V V + A S     +  G Y   Q  +  F  
Sbjct: 198 KAFAKIKSYNRVARNNEVELKAAISQGLVDVSIDASSVQFQLYKSGAYTDKQCKNNYFAL 257

Query: 351 NHVVSIVGHGIEVCDKDYPYWIIKNSWGTEFAESGFFKIRRGVNECDI 398
           NH V  VG+G+ V  K+   WI++NSWGT + E G+  +    N C +
Sbjct: 258 NHEVCAVGYGV-VDGKEC--WIVRNSWGTGWGEKGYINMVIEGNTCGV 302
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1106g012828
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10948g060321
         (578 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10706g059609
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10697g059578
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff106g001998
         (631 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10870g060093
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10740g059717
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1102g012786
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1137g013123
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1143g013174
         (667 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1135g013108
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11150g060977
         (394 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11211g061150
         (136 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10818g059942
         (235 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10647g059436
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10919g060234
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11344g061541
         (449 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1109g012850
         (152 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10796g059871
         (121 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11205g061130
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10846g060021
         (385 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10897g060175
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1124g012985
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10640g059423
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10800g059882
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11355g061574
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1073g012539
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11424g061786
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11165g061027
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10949g060324
         (229 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11230g061207
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11265g061297
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11058g060678
         (465 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10784g059837
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11004g060492
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff112g002099
         (522 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1131g013056
         (222 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10639g059417
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1083g012617
         (784 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1133g013086
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff110g002057
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11239g061228
         (144 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11165g061028
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11380g061653
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1138g013129
         (286 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11066g060702
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10668g059497
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10935g060286
         (129 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10837g059992
         (544 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11002g060486
         (449 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10827g059968
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10917g060228
         (375 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10844g060012
         (233 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10915g060220
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11262g061290
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11086g060764
         (217 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11407g061734
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11393g061695
         (307 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11223g061190
         (177 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10711g059625
         (170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff106g001993
         (520 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1113g012881
         (97 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11354g061568
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10934g060283
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10730g059694
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1110g012854
         (218 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10956g060341
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11332g061502
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11267g061312
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10966g060372
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10745g059734
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11438g061830
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11157g061000
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11191g061100
         (235 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1091g012676
         (194 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11103g060829
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10804g059900
         (337 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1081g012599
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11339g061528
         (155 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10925g060249
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10944g060308
         (347 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10903g060193
         (276 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11329g061491
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11170g061041
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11148g060967
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11351g061559
         (363 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1079g012586
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11114g060859
         (167 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10652g059454
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1078g012578
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11261g061285
         (376 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10657g059471
         (502 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1121g012957
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1114g012888
         (222 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11179g061066
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11188g061093
         (279 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10930g060268
         (170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1135g013105
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11358g061586
         (253 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1128g013028
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11386g061676
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10669g059499
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11412g061752
         (797 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1091g012671
         (498 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11060g060683
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11097g060809
         (278 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10769g059799
         (364 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10638g059411
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1070g012522
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10919g060233
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11267g061311
         (128 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10889g060140
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10890g060144
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10879g060118
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1102g012777
         (135 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10919g060236
         (97 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11088g060770
         (389 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff106g001992
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10997g060472
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1137g013119
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11329g061490
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11434g061822
         (396 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10668g059498
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10645g059433
         (487 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1094g012706
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1139g013132
         (274 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10926g060255
         (120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1132g013072
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1085g012630
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10g000269
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10838g059995
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1107g012838
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1075g012560
         (176 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1072g012529
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1101g012771
         (242 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11277g061336
         (394 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10632g059396
         (152 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11150g060976
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11121g060886
         (154 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10984g060430
         (215 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff113g002113
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1099g012754
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10759g059768
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10699g059587
         (203 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1134g013101
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10753g059749
         (365 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10981g060420
         (343 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11045g060642
         (276 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10785g059841
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11267g061310
         (157 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1138g013130
         (129 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11345g061543
         (191 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11379g061650
         (312 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11387g061679
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1105g012809
         (544 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11427g061795
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11197g061108
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff10815g059938
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1093g012691
         (214 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11333g061503
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1255g014194
         (372 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11723g062662
         (180 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11852g063039
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1277g014366
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12135g063853
         (312 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11878g063106
         (346 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1161g013356
         (286 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12248g064161
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12255g064185
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1200g013703
         (678 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12802g065675
         (163 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12818g065725
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12474g064792
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12204g064041
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff126g002302
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1199g013687
         (253 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12594g065104
         (213 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12735g065495
         (364 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12646g065254
         (186 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11965g063369
         (339 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12839g065776
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11662g062477
         (180 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12709g065430
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12598g065112
         (190 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1186g013562
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12438g064686
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12345g064443
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12510g064892
         (168 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12749g065533
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12830g065750
         (260 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1243g014079
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12377g064528
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff123g002271
         (153 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1216g013849
         (229 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11650g062436
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1146g013215
         (303 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1283g014427
         (131 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11578g062221
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1198g013685
         (217 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12039g063590
         (389 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]          186   1e-56
P92132  CP2  (Cysteine protease)  [Giardia duodenalis]                104   9e-27
PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]   101   2e-24
CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]        90   1e-20
AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    89   2e-20
XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium falc...    89   4e-20
XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]           80   1e-17
ABC02174  Falstatin  (Others)  [Plasmodium falciparum]                 79   4e-17
XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium falc...    79   4e-17
AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]           69   9e-15
CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]            65   6e-13
XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]           62   6e-12
AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]            60   3e-11
EAN83733  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]          55   7e-11
CAA38278  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]          52   5e-10
CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]            54   3e-09
XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]           54   5e-09
CAA54437  CP3  (Cysteine protease)  [Trichomonas vaginalis]            49   1e-07
BAA96736  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]          41   4e-06
BAA96737  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]          40   1e-05
>M.Javanica_Scaff12039g063590 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score =  186 bits (471), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/328 (36%), Positives = 167/328 (50%), Gaps = 44/328 (13%)

Query: 69  MVTAAQVEEINKSNKK-WKAKVHSKFADKTPAELNKFLGVKPTIDEEQKLKRNEQLKLLK 127
           +++ A V+ +N+ N+  WKAK      + T  E  +  GV         +K+N    +L 
Sbjct: 31  VLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGV---------IKKNNNASILP 81

Query: 128 RNKRSTENNKLLEEYKEFDARTEWPECKDVIDTIQDQSACGSCWAVSSASVMQDRICIST 187
           + +R TE          FD+   WP C   I  I DQSACGSCWAV++AS M DR C + 
Sbjct: 82  K-RRFTEEEARAPLPSSFDSAEAWPNCP-TIPQIADQSACGSCWAVAAASAMSDRFC-TM 138

Query: 188 GGELKVNISSEDILSC-EKTSYGCYGGYPEEAFKFWQEKGVCTGSGYSDHEGCKPYPFP- 245
           GG   V+IS+ D+L+C      GC GG P+ A+ ++   G+      SD+  C+PYPFP 
Sbjct: 139 GGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGL-----VSDY--CQPYPFPH 191

Query: 246 -----------PNPDEYMYSTPRCKRRCENRKYKT-KYNKDKHYGQEPVSLQDSDETDIM 293
                      P   ++ + TP+C   C++       Y     Y     +LQ  D  D M
Sbjct: 192 CSHHSKSKNGYPPCSQFNFDTPKCNYTCDDPTIPVVNYRSWTSY-----ALQGED--DYM 244

Query: 294 KAIIEGGPVEANFIVYYDFFSYSEGVYEAGDGEEMAGGHAIRIIGWGHHNKTDTPYWLIA 353
           + +   GP E  F VY DF +Y+ GVY    G+ + GGHA+R++GWG  N    PYW IA
Sbjct: 245 RELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYL-GGHAVRLVGWGTSNGV--PYWKIA 301

Query: 354 NSWGDQWGENGYFKIARGQDECLIESWG 381
           NSW  +WG +GYF I RG  EC IE  G
Sbjct: 302 NSWNTEWGMDGYFLIRRGSSECGIEDGG 329
>M.Javanica_Scaff12039g063590 on P92132  CP2  (Cysteine protease)  [Giardia duodenalis]
          Length = 255

 Score =  104 bits (259), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 43/275 (15%)

Query: 71  TAAQVEEINKSNKKWKAKVHSKFADKTPAELNKFLGVKPTIDEEQKLKRNEQLKLLKRNK 130
           T +++  I   N +WKA +  +F   T  E++  L                 +  LK  K
Sbjct: 17  TVSELNHIKSLNPRWKAGIPKRFEGLTKDEISSLL---------------MPVSFLKNAK 61

Query: 131 RSTENNKLLEE---YKEFDARTEWPECKDVIDTIQDQSACGSCWAVSSASVMQDRICIST 187
            +       ++    + FD R E+P C   I  + DQ  CGSCWA SS +   DR C++ 
Sbjct: 62  GAAPRGTFTDKDDVPESFDFREEYPHC---IPEVVDQGGCGSCWAFSSVATFGDRRCVAG 118

Query: 188 GGELKVNISSEDILSCEKTSYGCYGGYPEEAFKFWQEKGVCTGSGYSDHEGCKPYPFPPN 247
             +  V  S + ++SC+     C GG+    +KF  + G  T       + C PY     
Sbjct: 119 LDKKPVKYSPQYVVSCDHGDMACNGGWLPNVWKFLTKTGTTT-------DECVPY----- 166

Query: 248 PDEYMYSTPR--CKRRCENRKYKTKYNKDKHYGQEPVSLQDSDETDIMKAIIEGGPVEAN 305
             +   +T R  C  +C +   K        Y    +     D   +MKA+   GP++  
Sbjct: 167 --KSGSTTLRGTCPTKCADGSSKVHLATATSYKDYGL-----DIPAMMKALSTSGPLQVA 219

Query: 306 FIVYYDFFSYSEGVYEAGDGEEMAGGHAIRIIGWG 340
           F+V+ DF  Y  GVY+   G  M GGHA+ ++G+G
Sbjct: 220 FLVHSDFMYYESGVYQHTYG-YMEGGHAVEMVGYG 253
>M.Javanica_Scaff12039g063590 on PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]
          Length = 569

 Score =  101 bits (252), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 148/346 (42%), Gaps = 81/346 (23%)

Query: 66  KLKMVTAAQVEEINKSNKKWKAKVHSKFADKTPAELNKFLGVKPTIDEEQKLKRNEQLKL 125
           K+  ++     ++NK N  +K KV ++F+D +  EL ++      +      K ++  + 
Sbjct: 250 KINYISIKNHNKLNK-NAMYKKKV-NQFSDYSEEELKEYFKTLLHVPNHMIEKYSKPFE- 306

Query: 126 LKRNKRSTENNKLLEEY------KEFDARTEWPECKD-----VIDTIQDQSACGSCWAVS 174
                   ++N L+ E+       E D  ++ PE  D     ++   +DQ  CGSCWA +
Sbjct: 307 -----NHLKDNILISEFYTNGKRNEKDIFSKVPEILDYREKGIVHEPKDQGLCGSCWAFA 361

Query: 175 SASVMQDRICISTGGELKVNISSEDILSCEKTSYGCYGGYPEEAFKFWQEKGVCTGSGYS 234
           S   ++          L  + S ++++ C K ++GC GG+P  +F +  +  +C G  Y 
Sbjct: 362 SVGNIESVFAKKNKNIL--SFSEQEVVDCSKDNFGCDGGHPFYSFLYVLQNELCLGDEYK 419

Query: 235 ----DHEGCKPYPFPPNPDEYMYSTPRCKRRCENRKYKTKYNKDKHYGQEPVSLQDSDET 290
               D   C  Y              RCKR+                     S+    E 
Sbjct: 420 YKAKDDMFCLNY--------------RCKRKVS-----------------LSSIGAVKEN 448

Query: 291 DIMKAIIEGGPVEANFIVYYDFFSYSEGVYEAGDGEEMAGGHAIRIIGWG--------HH 342
            ++ A+ E GP+  N  V  DF +YSEGVY     EE+   H++ ++G+G        ++
Sbjct: 449 QLILALNEVGPLSVNVGVNNDFVAYSEGVYNGTCSEEL--NHSVLLVGYGQVEKTKLNYN 506

Query: 343 NKTDTP---------------YWLIANSWGDQWGENGYFKIARGQD 373
           NK  T                YW+I NSW  +WGENG+ +++R ++
Sbjct: 507 NKIQTYNTKENSNQPDDNIIYYWIIKNSWSKKWGENGFMRLSRNKN 552
>M.Javanica_Scaff12039g063590 on CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 450

 Score = 89.7 bits (221), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 114/231 (49%), Gaps = 28/231 (12%)

Query: 147 ARTEWPECKDVIDTIQDQSACGSCWAVSSASVMQDRICISTGGELKVNISSEDILSCEKT 206
           A  +W E K  +  ++DQ  CGSCWA S+   ++ +  ++  G   V++S + ++SC+  
Sbjct: 128 AAVDWRE-KGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVA--GNPLVSLSEQMLVSCDTI 184

Query: 207 SYGCYGGYPEEAFKFWQEKGVCTGSGYSDHEGCKPYPFPPNPDEYMYSTPRCKRRCENRK 266
            +GC GG  + AF +        G+ +++      YP+     E        + +C+   
Sbjct: 185 DFGCGGGLMDNAFNWIVNSN--GGNVFTEAS----YPYVSGNGE--------QPQCQMNG 230

Query: 267 YKTKYNKDKHYGQEPVSLQDSDETDIMKAIIEGGPVEANFIVYYDFFSYSEGVYEAGDGE 326
           ++       H     V L   DE  I   + E GP+ A  +    F  Y+ G+  +   E
Sbjct: 231 HEIGAAITDH-----VDLPQ-DEDAIAAYLAENGPL-AIAVDATSFMDYNGGILTSCTSE 283

Query: 327 EMAGGHAIRIIGWGHHNKTDTPYWLIANSWGDQWGENGYFKIARGQDECLI 377
           ++   H + ++G+  ++ ++ PYW+I NSW + WGE+GY +I +G ++CL+
Sbjct: 284 QL--DHGVLLVGY--NDSSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLM 330
>M.Javanica_Scaff12039g063590 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 89.4 bits (220), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 150/335 (44%), Gaps = 60/335 (17%)

Query: 51  KTENNEPGSKKLLRSKLKMV--TAAQVEEINKSNKKWKAKVHSKFADKTPAEL-NKFLGV 107
           KT N +  S   ++ + ++    A +V   N +      K  ++FAD T  E  NK+L +
Sbjct: 170 KTNNKQYNSPNEMKERFQVFLQNAHKVNMHNNNKNSLYKKELNRFADLTYHEFKNKYLSL 229

Query: 108 KPTIDEEQKLKRNEQLKLLKRNKRSTENNKLLEEYK---EFD-ARTEWPECKDVIDTIQD 163
           + +     K  +N +  L + N       +++++YK    FD A  +W      +  ++D
Sbjct: 230 RSS-----KPLKNSKYLLDQMNYE-----EVIKKYKGNENFDHAAYDW-RLHSGVTPVKD 278

Query: 164 QSACGSCWAVSSASVMQDRICISTGGELKVNISSEDILSCEKTSYGCYGGYPEEAFK-FW 222
           Q  CGSCWA SS   ++ +  I       + +S ++++ C   +YGC GG    AF+   
Sbjct: 279 QKNCGSCWAFSSIGSVESQYAIRKNK--LITLSEQELVDCSFKNYGCNGGLINNAFEDMI 336

Query: 223 QEKGVCTGSGYSDHEGCKPYPF-PPNPDEYMYSTPRCKRRCENRKYKTKYNKDKHYGQEP 281
           +  G+CT   Y       PY    PN    + +  RC  +   + Y              
Sbjct: 337 ELGGICTDDDY-------PYVSDAPN----LCNIDRCTEKYGIKNY-------------- 371

Query: 282 VSLQDSDETDIMKAIIEGGPVEANFIVYYDFFSYSEGVYEAGDGEEMAGGHAIRIIGWGH 341
           +S+ D+   + ++ +   GP+  +  V  DF  Y EG+++   G+++   HA+ ++G+G 
Sbjct: 372 LSVPDNKLKEALRFL---GPISISVAVSDDFAFYKEGIFDGECGDQL--NHAVMLVGFGM 426

Query: 342 HNKTDTP--------YWLIANSWGDQWGENGYFKI 368
               +          Y++I NSWG QWGE G+  I
Sbjct: 427 KEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINI 461
>M.Javanica_Scaff12039g063590 on XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 482

 Score = 88.6 bits (218), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 152/335 (45%), Gaps = 60/335 (17%)

Query: 51  KTENNEPGSKKLLRSKLKMV--TAAQVEEINKSNKKWKAKVHSKFADKTPAEL-NKFLGV 107
           KT N +  S   ++ + ++    A +V+  N + K    K  ++FAD T  E  +K+L +
Sbjct: 168 KTNNKQYNSPNEMKERFQVFLQNAHKVKMHNNNKKSLYKKELNRFADLTYHEFKSKYLTL 227

Query: 108 KPTIDEEQKLKRNEQLKLLKRNKRSTENNKLLEEYK---EFD-ARTEWPECKDVIDTIQD 163
           + +     K  +N +  L + N  +     ++++YK    FD A  +W      +  ++D
Sbjct: 228 RSS-----KPLKNSKYLLDQINYDA-----VIKKYKGNENFDHAAYDW-RLHSGVTPVKD 276

Query: 164 QSACGSCWAVSSASVMQDRICISTGGELKVNISSEDILSCEKTSYGCYGGYPEEAFK-FW 222
           Q  CGSCWA SS   ++ +  I       + +S ++++ C   +YGC GG    AF+   
Sbjct: 277 QKNCGSCWAFSSIGSVESQYAIRKNK--LITLSEQELVDCSFKNYGCNGGLINNAFEDMI 334

Query: 223 QEKGVCTGSGYSDHEGCKPYPF-PPNPDEYMYSTPRCKRRCENRKYKTKYNKDKHYGQEP 281
           +  G+CT   Y       PY    PN    + +  RC  +   + Y              
Sbjct: 335 ELGGICTDDDY-------PYVSDAPN----LCNIDRCTEKYGIKNY-------------- 369

Query: 282 VSLQDSDETDIMKAIIEGGPVEANFIVYYDFFSYSEGVYEAGDGEEMAGGHAIRIIGWGH 341
           +S+ D+   + ++ +   GP+  +  V  DF  Y EG+++   G+E+   HA+ ++G+G 
Sbjct: 370 LSVPDNKLKEALRFL---GPISISIAVSDDFPFYKEGIFDGECGDEL--NHAVMLVGFGM 424

Query: 342 HNKTDTP--------YWLIANSWGDQWGENGYFKI 368
               +          Y++I NSWG QWGE G+  I
Sbjct: 425 KEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINI 459
>M.Javanica_Scaff12039g063590 on XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]
          Length = 318

 Score = 79.7 bits (195), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 134/316 (42%), Gaps = 65/316 (20%)

Query: 75  VEEINKSNKKWKAKVHSKFADKTPAELNKFLGVKPTIDEEQKLKRNEQLKLLKRNKRSTE 134
           + + NK+N  ++  V   FA  T AE N  L  KP + ++Q                   
Sbjct: 46  IAKFNKNNS-FQLSVEGPFAAMTEAEYNSML--KPFVIDKQ------------------- 83

Query: 135 NNKLLEEYKEFDARTEWPECKD-----VIDTIQDQSACGSCWAVSSASVMQDRICISTGG 189
                 E   +D+R + PE  D      +  I+DQ++CGSC++ +S + ++ R+ ++   
Sbjct: 84  -----HEEIVYDSRGDVPESVDWRAKGKVPAIRDQASCGSCYSFASVAAIEGRLLVAGSK 138

Query: 190 ELKVN---ISSEDILSCEKT--SYGCYGGYPEEAFKFWQEKGVCTGSGYSDHEGCKPYPF 244
           +  V+   +S + ++ C  +  + GC GG    +F++ +  G+            K YP+
Sbjct: 139 KFTVDDLDLSEQQLVDCSVSVGNKGCNGGSLLLSFRYVKLNGIMQE---------KDYPY 189

Query: 245 PPNPDEYMYSTPRCKRRCENRKYKTKYNKDKHYGQEPVSLQDSDETDIMKAIIEGGPVEA 304
               +   Y   +   +   +K           G E   ++ + E  +  AI   G    
Sbjct: 190 VAAEETCTYDKKKVAVKITGQKLVRP-------GSEKALMRAAAEGPVAAAIDASG---- 238

Query: 305 NFIVYYDFFSYSEGVYEAGDGEEMAGGHAIRIIGWGHHNKTDTPYWLIANSWGDQWGENG 364
                  F  Y  G+Y + +       H + ++G+G  N T+  YW++ NSWG  WG+ G
Sbjct: 239 -----VKFQLYKSGIYNSKECSSTQLNHGVAVVGYGTQNGTE--YWIVRNSWGTIWGDQG 291

Query: 365 YFKIARGQ-DECLIES 379
           Y  ++R + ++C I S
Sbjct: 292 YVLMSRNKNNQCGIAS 307
>M.Javanica_Scaff12039g063590 on ABC02174  Falstatin  (Others)  [Plasmodium falciparum]
          Length = 492

 Score = 79.3 bits (194), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 149/363 (41%), Gaps = 63/363 (17%)

Query: 23  SDLYEKKDVLPXXXXXXXXXXXXQQIDEKTENNEPGSKKLLRSKLKMVTAAQVEEINKSN 82
           S+L++ K ++             ++ ++K E +E   K+ +   +      ++E  NK  
Sbjct: 153 SNLFDTKFLMDNLETVNLFYIFLKENNKKYETSEEMQKRFI---IFSENYRKIELHNKKT 209

Query: 83  KKWKAKVHSKFADKTPAEL-NKFLGVKPTIDEEQKLKRNEQLKLLKRNKRSTENNK-LLE 140
                +  +KF D +P E  +K+L           LK +   K L        N + +++
Sbjct: 210 NSLYKRGMNKFGDLSPEEFRSKYLN----------LKTHGPFKTLSPPVSYEANYEDVIK 259

Query: 141 EYKEFDARTE-----WPECKDVIDTIQDQSACGSCWAVSSASVMQDRICISTGGELKVNI 195
           +YK  DA+ +     W      +  ++DQ+ CGSCWA SS   ++ +  I          
Sbjct: 260 KYKPADAKLDRIAYDW-RLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFL--F 316

Query: 196 SSEDILSCEKTSYGCYGGYPEEAFK-FWQEKGVCTGSGYSDHEGCKPYPFPPNPDEYMYS 254
           S ++++ C   + GCYGGY   AF       G+C+            YP+  N  E   +
Sbjct: 317 SEQELVDCSVKNNGCYGGYITNAFDDMIDLGGLCSQD---------DYPYVSNLPETC-N 366

Query: 255 TPRCKRRCENRKYKTKYNKDKHYGQEPVSLQDSDETDIMKAIIEGGPVEANFIVYYDFFS 314
             RC  R   + Y              VS+ D    + ++ +   GP+  +     DF  
Sbjct: 367 LKRCNERYTIKSY--------------VSIPDDKFKEALRYL---GPISISIAASDDFAF 409

Query: 315 YSEGVYEAGDGE-EMAGGHAIRIIGWGHHN--KTDTP------YWLIANSWGDQWGENGY 365
           Y  G Y   DGE   A  HA+ ++G+G  +    DT       Y++I NSWG  WGE GY
Sbjct: 410 YRGGFY---DGECGAAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGY 466

Query: 366 FKI 368
             +
Sbjct: 467 INL 469
>M.Javanica_Scaff12039g063590 on XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 492

 Score = 79.3 bits (194), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 149/363 (41%), Gaps = 63/363 (17%)

Query: 23  SDLYEKKDVLPXXXXXXXXXXXXQQIDEKTENNEPGSKKLLRSKLKMVTAAQVEEINKSN 82
           S+L++ K ++             ++ ++K E +E   K+ +   +      ++E  NK  
Sbjct: 153 SNLFDTKFLMDNLETVNLFYIFLKENNKKYETSEEMQKRFI---IFSENYRKIELHNKKT 209

Query: 83  KKWKAKVHSKFADKTPAEL-NKFLGVKPTIDEEQKLKRNEQLKLLKRNKRSTENNK-LLE 140
                +  +KF D +P E  +K+L           LK +   K L        N + +++
Sbjct: 210 NSLYKRGMNKFGDLSPEEFRSKYLN----------LKTHGPFKTLSPPVSYEANYEDVIK 259

Query: 141 EYKEFDARTE-----WPECKDVIDTIQDQSACGSCWAVSSASVMQDRICISTGGELKVNI 195
           +YK  DA+ +     W      +  ++DQ+ CGSCWA SS   ++ +  I          
Sbjct: 260 KYKPADAKLDRIAYDW-RLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFL--F 316

Query: 196 SSEDILSCEKTSYGCYGGYPEEAFK-FWQEKGVCTGSGYSDHEGCKPYPFPPNPDEYMYS 254
           S ++++ C   + GCYGGY   AF       G+C+            YP+  N  E   +
Sbjct: 317 SEQELVDCSVKNNGCYGGYITNAFDDMIDLGGLCSQD---------DYPYVSNLPETC-N 366

Query: 255 TPRCKRRCENRKYKTKYNKDKHYGQEPVSLQDSDETDIMKAIIEGGPVEANFIVYYDFFS 314
             RC  R   + Y              VS+ D    + ++ +   GP+  +     DF  
Sbjct: 367 LKRCNERYTIKSY--------------VSIPDDKFKEALRYL---GPISISIAASDDFAF 409

Query: 315 YSEGVYEAGDGE-EMAGGHAIRIIGWGHHN--KTDTP------YWLIANSWGDQWGENGY 365
           Y  G Y   DGE   A  HA+ ++G+G  +    DT       Y++I NSWG  WGE GY
Sbjct: 410 YRGGFY---DGECGAAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGY 466

Query: 366 FKI 368
             +
Sbjct: 467 INL 469
>M.Javanica_Scaff12039g063590 on AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 206

 Score = 69.3 bits (168), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 32/224 (14%)

Query: 136 NKLLEEYKEFDARTEWPECKDVIDTIQDQSACGSCWAVSSASVMQDRICISTGGELKVNI 195
           NK ++ + + +   +W   K V++ IQDQ  CGSCWA S+    + +  I T GEL+  +
Sbjct: 12  NKAVKSHSKANDCIDW-RSKGVVNPIQDQGQCGSCWAFSAIQAQESQYAI-TSGELQ-KL 68

Query: 196 SSEDILSCEKTSYGCYGGYPEEAFKFWQEKGVCTGSGYSDHEGC--KPYPFPPNPDEYMY 253
           S ++++ C  T  GC GG    A+ +  +        Y D +      YP+     + ++
Sbjct: 69  SEQNLVDCVTTCDGCEGGLMTNAYDYVIK--------YQDGKFMLENDYPYTAYYYDCLF 120

Query: 254 STPRCKRRCENRKYKTKYNKDKHYGQEPVSLQDSDETDIMKAIIEGGPVEANF-IVYYDF 312
            T +      +                 +++ + DE D+   I   GP        +Y F
Sbjct: 121 DTDKAVSNIVSY----------------INVVEGDENDLATKISTNGPAAVAIDASHYSF 164

Query: 313 FSYSEGVYEAGDGEEMAGGHAIRIIGWGHHNKTDTPYWLIANSW 356
             YS+G+Y           H +  +G+G      T YW++ NSW
Sbjct: 165 QLYSQGIYNVPSRSSYGLDHGVGCVGYGAEGS--TKYWIVKNSW 206
>M.Javanica_Scaff12039g063590 on CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 64.7 bits (156), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 111/280 (39%), Gaps = 55/280 (19%)

Query: 75  VEEINKSNKKWKAKVHSKFADKTPAELNKFLGVKPTIDEEQKLKRNEQLKLLKRNKRSTE 134
           V+E N++N  +   ++ K A  TPAE N  LG +    E + +K N              
Sbjct: 28  VQEHNRANLGFTVALN-KLAHLTPAEYNSLLGFRMNKAERKAVKSNAIA----------- 75

Query: 135 NNKLLEEYKEFDARTEWPECKDVIDTIQDQSACGSCWAVSSASVMQDRICISTGGELKVN 194
                      +A  +W + K  ++ I+DQ  CGSCWA S+    + +  IS   +   +
Sbjct: 76  -----------NADCDWRK-KGAVNPIKDQGQCGSCWAFSAIQAQESQYYISF--KTLQS 121

Query: 195 ISSEDILSCEKTSYGCYGGYPEEAFKFWQEKGVCTGSGYSDHEGCKPYPFPPNPDEYMYS 254
           +S ++++ C  T YGC GG  + A+ +              H+  K   F    D Y Y+
Sbjct: 122 LSEQNLVDCVTTCYGCNGGLMDAAYDY-----------VVKHQSGK---FMTEAD-YPYT 166

Query: 255 TPRCKRRCENRKYKTKYNKDKHYGQ--EPVSLQDSDETDIMKAIIEGGPVEANF-IVYYD 311
                     R    K+N  K   Q    V++ + DE D+   +   GP         + 
Sbjct: 167 A---------RDGSCKFNAAKGTSQIKSYVNVAEGDEKDLATKVSTLGPAAIAIDASAWS 217

Query: 312 FFSYSEGVYEAGDGEEMAGGHAIRIIGWGHHNKTDTPYWL 351
           F  YS G+Y+          H +  +G+G     +  YW+
Sbjct: 218 FQLYSSGIYDESACSSYNLDHGVGCVGYGTEGSKN--YWI 255
>M.Javanica_Scaff12039g063590 on XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 62.4 bits (150), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 131/313 (41%), Gaps = 49/313 (15%)

Query: 78  INKSNKKWKAKVHSKFADKTPAELNKFLGVKPTIDEEQKLKRNEQLKLLKRNKRSTENNK 137
           I K  ++    +++KF D      NK    K ++D       NE+ + L ++KR+TE N 
Sbjct: 30  IEKLRRRAIFNMNAKFVD----SFNKIGSFKLSVDGPFAAMTNEEYRTLLKSKRTTEENG 85

Query: 138 LLEEYKEFDARTEWPECKD-----VIDTIQDQSACGSCWAVSSASVMQDRICISTGGELK 192
            ++ Y    A    PE  D      +  I+DQ+ CGSC+   S + ++ R+ I  GG+  
Sbjct: 86  QVK-YLNIQA----PESVDWRKEGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGDAN 140

Query: 193 -VNISSEDILSCEK--TSYGCYGGYPEEAFKFWQEKGVCTGSGYSDHEGCKPYPFPPNPD 249
            +++S E ++ C +   + GC GG     + +  E GV   S Y                
Sbjct: 141 TLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEHGVAKESDY---------------- 184

Query: 250 EYMYSTPRCKRRCENRKYKTKYNKDKHYGQEPVSLQDSDETDIMKAIIEGGPVEANFIVY 309
            Y  S   CK   ++    T Y K          +  ++E + +KA +  G V+ +    
Sbjct: 185 PYTGSDSTCKTNVKSFAKITGYTK----------VPRNNEAE-LKAALSQGLVDVSIDAS 233

Query: 310 YDFFS-YSEGVYEAGDGEE--MAGGHAIRIIGWGHHNKTDTPYWLIANSWGDQWGENGYF 366
              F  Y  G Y     +    A  H +  +G+G  +  +   W++ NSWG  WG+ GY 
Sbjct: 234 SAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKEC--WIVRNSWGTGWGDKGYI 291

Query: 367 KIARGQDECLIES 379
            +    + C + +
Sbjct: 292 NMVIEGNTCGVAT 304
>M.Javanica_Scaff12039g063590 on AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 60.1 bits (144), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 101/250 (40%), Gaps = 53/250 (21%)

Query: 75  VEEINKSNKKWKAKVHSKFADKTPAELNKFLGVKPTIDEEQKLKRNEQLKLLKRNKRSTE 134
           V+E N++N  +   ++ K A  TPAE N  LG +    E + +K N              
Sbjct: 41  VQEHNRANLGFTVALN-KLAHLTPAEYNSLLGFRMNKAERKAVKSNAIA----------- 88

Query: 135 NNKLLEEYKEFDARTEWPECKDVIDTIQDQSACGSCWAVSSASVMQDRICISTGGELKVN 194
                      +A  +W + K  ++ I+DQ  CGSCWA S+    + +  IS   +   +
Sbjct: 89  -----------NADCDWRK-KGAVNPIKDQGQCGSCWAFSAIQAQESQYYISF--KTLQS 134

Query: 195 ISSEDILSCEKTSYGCYGGYPEEAFKFWQEKGVCTGSGYSDHEGCKPYPFPPNPDEYMYS 254
           +S ++++ C  T YGC GG  + A+ +              H+  K   F    D Y Y+
Sbjct: 135 LSEQNLVDCVTTCYGCNGGLMDAAYDY-----------VVKHQSGK---FMTEAD-YPYT 179

Query: 255 TPRCKRRCENRKYKTKYNKDKHYGQ--EPVSLQDSDETDIMKAIIEGGPVEANF-IVYYD 311
                     R    K+N  K   Q    V++ + DE D+   +   GP         + 
Sbjct: 180 A---------RDGSCKFNAAKGTSQIKSYVNVAEGDEKDLATKVSTLGPAAIAIDASAWS 230

Query: 312 FFSYSEGVYE 321
           F  YS G+Y+
Sbjct: 231 FQLYSSGIYD 240
>M.Javanica_Scaff12039g063590 on EAN83733  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]
          Length = 70

 Score = 54.7 bits (130), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 18/39 (46%), Positives = 30/39 (76%)

Query: 340 GHHNKTDTPYWLIANSWGDQWGENGYFKIARGQDECLIE 378
           G+++    P+W+I NSW  QWGE+GY +IA+G ++CL++
Sbjct: 4   GYNDSATVPHWIIKNSWTTQWGEDGYIRIAKGSNQCLVK 42
>M.Javanica_Scaff12039g063590 on CAA38278  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]
          Length = 70

 Score = 52.0 bits (123), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 26/32 (81%)

Query: 347 TPYWLIANSWGDQWGENGYFKIARGQDECLIE 378
            PYW+I NSW  QWGE+GY +IA+G ++CL++
Sbjct: 3   VPYWIIKNSWTAQWGEDGYIRIAKGSNQCLVK 34
>M.Javanica_Scaff12039g063590 on CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 53.9 bits (128), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 3/116 (2%)

Query: 106 GVKPTIDEEQKLKRNEQLKLLKRNKRSTENNKLLEEYKEFDARTEWPECKDVIDTIQDQS 165
           G K  +++   L ++E   LL   +   ++    +     +   +W + K +++ I+DQ 
Sbjct: 60  GFKLGLNKLAHLTQSEYRSLLGAKRLGQKSGNFFKCDAPANDAVDWRD-KGIVNKIKDQG 118

Query: 166 ACGSCWAVSSASVMQDRICISTGGELKVNISSEDILSCEKTSYGCYGGYPEEAFKF 221
            CGSCWA S+    + R   +   +  ++++ ++I+ C  + YGC GG+P +A  +
Sbjct: 119 QCGSCWAFSAIQASESR--YAQANKQLLDLAEQNIVDCVTSCYGCNGGWPSKAIDY 172
>M.Javanica_Scaff12039g063590 on XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 53.9 bits (128), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 116/291 (39%), Gaps = 37/291 (12%)

Query: 96  KTPAELNKFLGVKPTIDEEQKLKRNEQLKLLKRNKRSTENNKLLEEYKEFDA--RTEWPE 153
           +  AE N+    K ++D       NE+   L + KRS E    +  Y    A    +W +
Sbjct: 44  RIVAENNRKETFKLSVDGPFAAMTNEEYNSLLKLKRSGEEKGEVR-YLNIQAPKAVDWRK 102

Query: 154 CKDVIDTIQDQSACGSCWAVSSASVMQDRICISTGGELK-VNISSEDILSC--EKTSYGC 210
            K  +  I+DQ  CGSC+   S + ++ R+ I  GG+ + +++S E ++ C  E  + GC
Sbjct: 103 -KGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTREDGNNGC 161

Query: 211 YGGYPEEAFKFWQEKGVCTGSGYSDHEGCKPYPFPPNPDEYMYSTPRCKRRCENRKYKTK 270
            GG     + +  E G+   S Y                 Y  S   C+   +       
Sbjct: 162 NGGLGSNVYNYIMENGIAKESDYP----------------YTGSDSTCRSDVKAFAKIKS 205

Query: 271 YNKDKHYGQEPVSLQDSDETDIMKAIIEGGPVEANFIVYYDFFSYSEGVY--EAGDGEEM 328
           YN+        V L+ +    ++   I+   V+        F  Y  G Y  +       
Sbjct: 206 YNRVAR--NNEVELKAAISQGLVDVSIDASSVQ--------FQLYKSGAYTDKQCKNNYF 255

Query: 329 AGGHAIRIIGWGHHNKTDTPYWLIANSWGDQWGENGYFKIARGQDECLIES 379
           A  H +  +G+G  +  +   W++ NSWG  WGE GY  +    + C + +
Sbjct: 256 ALNHEVCAVGYGVVDGKEC--WIVRNSWGTGWGEKGYINMVIEGNTCGVAT 304
>M.Javanica_Scaff12039g063590 on CAA54437  CP3  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 49.3 bits (116), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 29/164 (17%)

Query: 52  TENNEPGSKKLLRSKLKMVTAAQVEEINKSNKKWKAKVHSKFADKTPAELNKFLGVKPT- 110
           T N   G +   R  +      +V+E N++N  ++  ++   +  TP+E    LG K T 
Sbjct: 29  TNNMFVGDEYHFRLGVYNTNKRRVQEHNRANSGYQLTMN-HLSCMTPSEYKVLLGHKQTK 87

Query: 111 -IDEEQKLKRNEQLKLLKRNKRSTENNKLLEEYKEFDARTEWPECKDVIDTIQDQSACGS 169
            I+ E K+ + +                            +W   K +++ I+DQ+ CGS
Sbjct: 88  KIEGEAKIFKGD-----------------------VPDAVDWRNAK-IVNPIKDQAQCGS 123

Query: 170 CWAVSSASVMQDRICISTGGELKVNISSEDILSCEKTSYGCYGG 213
           CWA S   V + +  +  G  L  +++ ++++ C  T YGC GG
Sbjct: 124 CWAFSVVQVQESQWALKKGQLL--SLAEQNMVDCVDTCYGCDGG 165
>M.Javanica_Scaff12039g063590 on BAA96736  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]
          Length = 70

 Score = 41.2 bits (95), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 167 CGSCWAVSSASVMQDRICISTGGELKVNISSEDILSCEKTSYGCYGGYPEEAFKF 221
           CGSCWA S+   ++ +  ++  G    N+S + ++SC+KT  GC GG    AF++
Sbjct: 3   CGSCWAFSAIGNVEGQWFLA--GHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEW 55
>M.Javanica_Scaff12039g063590 on BAA96737  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]
          Length = 70

 Score = 39.7 bits (91), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 167 CGSCWAVSSASVMQDRICISTGGELKVNISSEDILSCEKTSYGCYGGYPEEAFKF 221
           CGSCWA S+   ++ +  ++  G    N+S + ++SC+KT  GC GG    AF++
Sbjct: 3   CGSCWAFSAIGNVECQWFLA--GHPLTNLSEQMLVSCDKTDSGCGGGLMNNAFEW 55
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11627g062365
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12308g064354
         (248 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11787g062846
         (240 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11917g063215
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12731g065486
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12709g065429
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12709g065431
         (136 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1150g013251
         (234 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12399g064581
         (282 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11948g063316
         (223 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11770g062806
         (129 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1152g013276
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1287g014463
         (446 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1159g013342
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1209g013792
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11760g062771
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12505g064883
         (253 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12851g065808
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff127g002323
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11543g062108
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12455g064731
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11928g063252
         (380 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11840g063003
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12528g064940
         (192 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11689g062560
         (239 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1234g013997
         (222 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12135g063855
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12427g064659
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1275g014351
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff128g002329
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12763g065572
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11664g062481
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12150g063897
         (249 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12046g063611
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11762g062779
         (271 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1178g013498
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12835g065767
         (324 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1291g014492
         (282 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1277g014363
         (596 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12902g065964
         (223 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff118g002167
         (230 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1174g013469
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12135g063854
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1284g014436
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1192g013628
         (242 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1149g013244
         (172 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12161g063919
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12304g064340
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff123g002259
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff117g002153
         (282 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1195g013658
         (347 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11628g062370
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11659g062465
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11650g062438
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12494g064850
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12127g063831
         (554 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11924g063234
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11524g062056
         (272 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12136g063857
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11676g062518
         (748 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11533g062080
         (192 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12258g064193
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11852g063035
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12620g065170
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1211g013806
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff127g002317
         (227 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11953g063330
         (409 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]          147   6e-42
P92132  CP2  (Cysteine protease)  [Giardia duodenalis]                 80   3e-18
PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]    73   7e-15
ABC02174  Falstatin  (Others)  [Plasmodium falciparum]                 72   8e-15
XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium falc...    72   8e-15
AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    70   5e-14
XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium falc...    69   8e-14
CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]        63   9e-12
AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]           54   2e-09
XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]           54   3e-09
EAN83733  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]          43   1e-06
CAA38278  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]          40   6e-06
CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]            42   2e-05
>M.Javanica_Scaff11953g063330 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score =  147 bits (372), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 156/339 (46%), Gaps = 52/339 (15%)

Query: 84  LTAQNVAIINGRTNGIWEAKL-GFFSLLPDEDQKKLCGVFGIEVENIAGRDTSEVATGER 142
           L+   V  +N    GIW+AK  G    +   + K+L GV          +  +  +   +
Sbjct: 32  LSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVI---------KKNNNASILPK 82

Query: 143 NKRQASQANCNYTTEFDVRDKWPKCSPFINHVQHQGLCGSCWAISTASVYTDRHCIERDK 202
            +    +A     + FD  + WP C P I  +  Q  CGSCWA++ AS  +DR C     
Sbjct: 83  RRFTEEEARAPLPSSFDSAEAWPNC-PTIPQIADQSACGSCWAVAAASAMSDRFCTMGGV 141

Query: 203 KGLSTPNNASFTYSSFDVLACSPE--KGCSGGWPHKAWDSIKANGICTGSDFTSNTGCKP 260
           + +          S+ D+LAC  +   GC+GG P +AW    + G+   SD+     C+P
Sbjct: 142 QDVHI--------SAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLV--SDY-----CQP 186

Query: 261 YPFKPTERYPILKSCKKSCTNEYWGVPYDTDRKNYVTSTSTI-------------KGENA 307
           YPF     +   K+    C+       +DT + NY     TI             +GE+ 
Sbjct: 187 YPFPHCSHHSKSKNGYPPCSQ----FNFDTPKCNYTCDDPTIPVVNYRSWTSYALQGEDD 242

Query: 308 IKEELHENGPVVACFSVYKDFYSHADGSDGVYFHVWGDYDRSHAVVIVGYGTASCGYEKI 367
              EL   GP    F VY+DF ++   + GVY HV G Y   HAV +VG+GT++     +
Sbjct: 243 YMRELFFRGPFEVAFDVYEDFIAY---NSGVYHHVSGQYLGGHAVRLVGWGTSN----GV 295

Query: 368 PYWIIRNSWGTNSTGEGFLKFRRGNNECGIEQTVSFGIP 406
           PYW I NSW T    +G+   RRG++ECGIE   S GIP
Sbjct: 296 PYWKIANSWNTEWGMDGYFLIRRGSSECGIEDGGSAGIP 334
>M.Javanica_Scaff11953g063330 on P92132  CP2  (Cysteine protease)  [Giardia duodenalis]
          Length = 255

 Score = 80.5 bits (197), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 38/208 (18%)

Query: 158 FDVRDKWPKCSPFINHVQHQGLCGSCWAISTASVYTDRHCIE-RDKKGLSTPNNASFTYS 216
           FD R+++P C P    V  QG CGSCWA S+ + + DR C+   DKK +         YS
Sbjct: 79  FDFREEYPHCIP---EVVDQGGCGSCWAFSSVATFGDRRCVAGLDKKPVK--------YS 127

Query: 217 SFDVLACSP-EKGCSGGWPHKAWDSIKANGICTGSDFTSNTGCKPYPFKPTERYPILKSC 275
              V++C   +  C+GGW    W  +   G       T+   C PY    T    +  +C
Sbjct: 128 PQYVVSCDHGDMACNGGWLPNVWKFLTKTG-------TTTDECVPYKSGSTT---LRGTC 177

Query: 276 KKSCTNEYWGVPYDTDRKNYVTSTSTIKGEN----AIKEELHENGPVVACFSVYKDFYSH 331
              C         D   K ++ + ++ K       A+ + L  +GP+   F V+ DF  +
Sbjct: 178 PTKCA--------DGSSKVHLATATSYKDYGLDIPAMMKALSTSGPLQVAFLVHSDFMYY 229

Query: 332 ADGSDGVYFHVWGDYDRSHAVVIVGYGT 359
                GVY H +G  +  HAV +VGYGT
Sbjct: 230 ---ESGVYQHTYGYMEGGHAVEMVGYGT 254
>M.Javanica_Scaff11953g063330 on PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]
          Length = 569

 Score = 72.8 bits (177), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 115/281 (40%), Gaps = 68/281 (24%)

Query: 156 TEFDVRDKWPKCSPF-----INHVQHQGLCGSCWAISTASVYTDRHCIERDKKGLSTPNN 210
            E D+  K P+   +     ++  + QGLCGSCWA   ASV        +  K +     
Sbjct: 325 NEKDIFSKVPEILDYREKGIVHEPKDQGLCGSCWAF--ASVGNIESVFAKKNKNI----- 377

Query: 211 ASFTYSSFDVLACSPEK-GCSGGWPHKAWDSIKANGICTGSDFTSNTGCKPYPFKPTERY 269
              ++S  +V+ CS +  GC GG P  ++  +  N +C G ++                 
Sbjct: 378 --LSFSEQEVVDCSKDNFGCDGGHPFYSFLYVLQNELCLGDEY----------------- 418

Query: 270 PILKSCKKSCTNEYWGVPYDTDRKNYVTSTSTIKGENAIKEELHENGPVVACFSVYKDFY 329
                 K    ++ + + Y   RK  ++S   +K EN +   L+E GP+     V  DF 
Sbjct: 419 ------KYKAKDDMFCLNYRCKRKVSLSSIGAVK-ENQLILALNEVGPLSVNVGVNNDFV 471

Query: 330 SHADGSDGVYFHVWGDYDRSHAVVIVGYGTAS---CGYEK------------------IP 368
           ++   S+GVY     + + +H+V++VGYG        Y                    I 
Sbjct: 472 AY---SEGVYNGTCSE-ELNHSVLLVGYGQVEKTKLNYNNKIQTYNTKENSNQPDDNIIY 527

Query: 369 YWIIRNSWGTNSTGEGFLKFRRGNN----ECGIEQTVSFGI 405
           YWII+NSW       GF++  R  N     CGI + V + I
Sbjct: 528 YWIIKNSWSKKWGENGFMRLSRNKNGDNVFCGIGEEVFYPI 568
>M.Javanica_Scaff11953g063330 on ABC02174  Falstatin  (Others)  [Plasmodium falciparum]
          Length = 492

 Score = 72.4 bits (176), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 107/248 (43%), Gaps = 59/248 (23%)

Query: 171 INHVQHQGLCGSCWAISTASVYTDRHCIERDKKGLSTPNNASFTYSSFDVLACSPE-KGC 229
           +  V+ Q LCGSCWA S+      ++ I +          A F +S  +++ CS +  GC
Sbjct: 281 VTPVKDQALCGSCWAFSSVGSVESQYAIRK---------KALFLFSEQELVDCSVKNNGC 331

Query: 230 SGGWPHKAWDS-IKANGICTGSDFTSNTGCKPYPFKPTERYPILKSCKKSCTNEYWGVPY 288
            GG+   A+D  I   G+C+  D         YP+       + ++C     NE + +  
Sbjct: 332 YGGYITNAFDDMIDLGGLCSQDD---------YPYVSN----LPETCNLKRCNERYTI-- 376

Query: 289 DTDRKNYVTSTSTIKGENAIKEELHENGPVVACFSVYKDFYSHADGSDGVYFHVWGDYD- 347
               K+YV+       ++  KE L   GP+    +           SD   F+  G YD 
Sbjct: 377 ----KSYVSIP-----DDKFKEALRYLGPISISIA----------ASDDFAFYRGGFYDG 417

Query: 348 -----RSHAVVIVGYGTASC------GYEKIPYWIIRNSWGTNSTGEGFLKFRRGNNECG 396
                 +HAV++VGYG            EK  Y+II+NSWG++    G++      +E G
Sbjct: 418 ECGAAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLE--TDENG 475

Query: 397 IEQTVSFG 404
            ++T S G
Sbjct: 476 YKKTCSIG 483
>M.Javanica_Scaff11953g063330 on XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 492

 Score = 72.4 bits (176), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 107/248 (43%), Gaps = 59/248 (23%)

Query: 171 INHVQHQGLCGSCWAISTASVYTDRHCIERDKKGLSTPNNASFTYSSFDVLACSPE-KGC 229
           +  V+ Q LCGSCWA S+      ++ I +          A F +S  +++ CS +  GC
Sbjct: 281 VTPVKDQALCGSCWAFSSVGSVESQYAIRK---------KALFLFSEQELVDCSVKNNGC 331

Query: 230 SGGWPHKAWDS-IKANGICTGSDFTSNTGCKPYPFKPTERYPILKSCKKSCTNEYWGVPY 288
            GG+   A+D  I   G+C+  D         YP+       + ++C     NE + +  
Sbjct: 332 YGGYITNAFDDMIDLGGLCSQDD---------YPYVSN----LPETCNLKRCNERYTI-- 376

Query: 289 DTDRKNYVTSTSTIKGENAIKEELHENGPVVACFSVYKDFYSHADGSDGVYFHVWGDYD- 347
               K+YV+       ++  KE L   GP+    +           SD   F+  G YD 
Sbjct: 377 ----KSYVSIP-----DDKFKEALRYLGPISISIA----------ASDDFAFYRGGFYDG 417

Query: 348 -----RSHAVVIVGYGTASC------GYEKIPYWIIRNSWGTNSTGEGFLKFRRGNNECG 396
                 +HAV++VGYG            EK  Y+II+NSWG++    G++      +E G
Sbjct: 418 ECGAAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLE--TDENG 475

Query: 397 IEQTVSFG 404
            ++T S G
Sbjct: 476 YKKTCSIG 483
>M.Javanica_Scaff11953g063330 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 70.1 bits (170), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 47/239 (19%)

Query: 174 VQHQGLCGSCWAISTASVYTDRHCIERDKKGLSTPNNASFTYSSFDVLACSPEK-GCSGG 232
           V+ Q  CGSCWA S+      ++ I ++K           T S  +++ CS +  GC+GG
Sbjct: 276 VKDQKNCGSCWAFSSIGSVESQYAIRKNK---------LITLSEQELVDCSFKNYGCNGG 326

Query: 233 WPHKAW-DSIKANGICTGSDFTSNTGCKPYPFKPTERYPILKSCKKSCTNEYWGVPYDTD 291
             + A+ D I+  GICT  D+       PY        P L +  + CT +Y G+     
Sbjct: 327 LINNAFEDMIELGGICTDDDY-------PY----VSDAPNLCNIDR-CTEKY-GI----- 368

Query: 292 RKNYVTSTSTIKGENAIKEELHENGPVVACFSVYKDFYSHADGSDGVYFHVWGDYDRSHA 351
            KNY++       +N +KE L   GP+    +V  DF   A   +G++    GD   +HA
Sbjct: 369 -KNYLSVP-----DNKLKEALRFLGPISISVAVSDDF---AFYKEGIFDGECGD-QLNHA 418

Query: 352 VVIVGYGTASC------GYEKIPYWIIRNSWGTNSTGEGFLKFRRGNNECGIEQTVSFG 404
           V++VG+G            EK  Y+II+NSWG      GF+      +E G+ +    G
Sbjct: 419 VMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIE--TDESGLMRKCGLG 475
>M.Javanica_Scaff11953g063330 on XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 482

 Score = 69.3 bits (168), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 47/239 (19%)

Query: 174 VQHQGLCGSCWAISTASVYTDRHCIERDKKGLSTPNNASFTYSSFDVLACSPEK-GCSGG 232
           V+ Q  CGSCWA S+      ++ I ++K           T S  +++ CS +  GC+GG
Sbjct: 274 VKDQKNCGSCWAFSSIGSVESQYAIRKNK---------LITLSEQELVDCSFKNYGCNGG 324

Query: 233 WPHKAW-DSIKANGICTGSDFTSNTGCKPYPFKPTERYPILKSCKKSCTNEYWGVPYDTD 291
             + A+ D I+  GICT  D+       PY        P L +  + CT +Y G+     
Sbjct: 325 LINNAFEDMIELGGICTDDDY-------PY----VSDAPNLCNIDR-CTEKY-GI----- 366

Query: 292 RKNYVTSTSTIKGENAIKEELHENGPVVACFSVYKDFYSHADGSDGVYFHVWGDYDRSHA 351
            KNY++       +N +KE L   GP+    +V  DF  +    +G++    GD + +HA
Sbjct: 367 -KNYLSVP-----DNKLKEALRFLGPISISIAVSDDFPFY---KEGIFDGECGD-ELNHA 416

Query: 352 VVIVGYGTASC------GYEKIPYWIIRNSWGTNSTGEGFLKFRRGNNECGIEQTVSFG 404
           V++VG+G            EK  Y+II+NSWG      GF+      +E G+ +    G
Sbjct: 417 VMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIE--TDESGLMRKCGLG 473
>M.Javanica_Scaff11953g063330 on CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 450

 Score = 62.8 bits (151), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 38/237 (16%)

Query: 171 INHVQHQGLCGSCWAISTASVYTDRHCIERDKKGLSTPNNASFTYSSFDVLAC-SPEKGC 229
           +  V+ QG CGSCWA ST         I   +       N   + S   +++C + + GC
Sbjct: 138 VTPVKDQGQCGSCWAFST---------IGNIEGQWQVAGNPLVSLSEQMLVSCDTIDFGC 188

Query: 230 SGGWPHKAWD-SIKANGICTGSDFTSNTGCKPYPFKPTERYPILKSCKKSCTNEYWGVPY 288
            GG    A++  + +NG   G+ FT  +            YP +    +    +  G   
Sbjct: 189 GGGLMDNAFNWIVNSNG---GNVFTEAS------------YPYVSGNGEQPQCQMNGHEI 233

Query: 289 DTDRKNYVTSTSTIKGENAIKEELHENGPVVACFSVYKDFYSHADGSDGVYFHVWGDYDR 348
                ++V      + E+AI   L ENGP+    ++  D  S  D + G+      +   
Sbjct: 234 GAAITDHV---DLPQDEDAIAAYLAENGPL----AIAVDATSFMDYNGGILTSCTSE-QL 285

Query: 349 SHAVVIVGYGTASCGYEKIPYWIIRNSWGTNSTGEGFLKFRRGNNECGIEQTVSFGI 405
            H V++VGY  +S      PYWII+NSW      +G+++  +G N+C + Q VS  +
Sbjct: 286 DHGVLLVGYNDSS----NPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 338
>M.Javanica_Scaff11953g063330 on AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 206

 Score = 53.9 bits (128), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 81/210 (38%), Gaps = 40/210 (19%)

Query: 171 INHVQHQGLCGSCWAISTASVYTDRHCIERDKKGLSTPNNASFTYSSFDVLACSPEKGCS 230
           +N +Q QG CGSCWA S       ++ I   +    +  N     ++ D        GC 
Sbjct: 33  VNPIQDQGQCGSCWAFSAIQAQESQYAITSGELQKLSEQNLVDCVTTCD--------GCE 84

Query: 231 GGWPHKAWDSIKANGICTGSDFTSNTGCKPYPFKPTERYPILKSCKKSCTNEYWGVPYDT 290
           GG    A+D +                 +   F     YP         T  Y+   +DT
Sbjct: 85  GGLMTNAYDYV--------------IKYQDGKFMLENDYPY--------TAYYYDCLFDT 122

Query: 291 DR--KNYVTSTSTIKG-ENAIKEELHENGPVVACFSVYKDFYSHADGSDGVY-FHVWGDY 346
           D+   N V+  + ++G EN +  ++  NGP  A  ++    YS    S G+Y       Y
Sbjct: 123 DKAVSNIVSYINVVEGDENDLATKISTNGP--AAVAIDASHYSFQLYSQGIYNVPSRSSY 180

Query: 347 DRSHAVVIVGYGTASCGYEKIPYWIIRNSW 376
              H V  VGYG          YWI++NSW
Sbjct: 181 GLDHGVGCVGYGAEG----STKYWIVKNSW 206
>M.Javanica_Scaff11953g063330 on XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]
          Length = 318

 Score = 54.3 bits (129), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 66/251 (26%)

Query: 174 VQHQGLCGSCWAISTASVYTDRHCIERDKKGLSTPNNASFTYSSFDV-----LACSPE-- 226
           ++ Q  CGSC++ ++ +    R  +   KK         FT    D+     + CS    
Sbjct: 110 IRDQASCGSCYSFASVAAIEGRLLVAGSKK---------FTVDDLDLSEQQLVDCSVSVG 160

Query: 227 -KGCSGGWPHKAWDSIKANGICTGSDFTSNTGCKPYPFKPTERYPILKSCKKSCTNEYWG 285
            KGC+GG    ++  +K NGI    D         YP+   E         ++CT     
Sbjct: 161 NKGCNGGSLLLSFRYVKLNGIMQEKD---------YPYVAAE---------ETCT----- 197

Query: 286 VPYDTDRKNYVTSTSTIKGENAIKEELHENGPVVACFSVYKDFYSHADGSDGVYFHVW-- 343
             YD  +         I G+  ++    +    +   +      +  D S GV F ++  
Sbjct: 198 --YDKKK-----VAVKITGQKLVRPGSEK---ALMRAAAEGPVAAAIDAS-GVKFQLYKS 246

Query: 344 GDYDR--------SHAVVIVGYGTASCGYEKIPYWIIRNSWGTNSTGEGF-LKFRRGNNE 394
           G Y+         +H V +VGYGT + G E   YWI+RNSWGT    +G+ L  R  NN+
Sbjct: 247 GIYNSKECSSTQLNHGVAVVGYGTQN-GTE---YWIVRNSWGTIWGDQGYVLMSRNKNNQ 302

Query: 395 CGIEQTVSFGI 405
           CGI    ++ +
Sbjct: 303 CGIASGAAYPV 313
>M.Javanica_Scaff11953g063330 on EAN83733  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]
          Length = 70

 Score = 42.7 bits (99), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 35/53 (66%), Gaps = 4/53 (7%)

Query: 353 VIVGYGTASCGYEKIPYWIIRNSWGTNSTGEGFLKFRRGNNECGIEQTVSFGI 405
           ++VGY  ++     +P+WII+NSW T    +G+++  +G+N+C +++ VS  +
Sbjct: 1   LLVGYNDSAT----VPHWIIKNSWTTQWGEDGYIRIAKGSNQCLVKEAVSSAV 49
>M.Javanica_Scaff11953g063330 on CAA38278  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]
          Length = 70

 Score = 40.4 bits (93), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 13/39 (33%), Positives = 26/39 (66%)

Query: 367 IPYWIIRNSWGTNSTGEGFLKFRRGNNECGIEQTVSFGI 405
           +PYWII+NSW      +G+++  +G+N+C +++  S  +
Sbjct: 3   VPYWIIKNSWTAQWGEDGYIRIAKGSNQCLVKEEASSAV 41
>M.Javanica_Scaff11953g063330 on CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 42.4 bits (98), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 15/84 (17%)

Query: 159 DVRDKWPKCSPFINHVQHQGLCGSCWAISTASVYTDRHCIERDKKGLSTPNNASFTYSSF 218
           D RDK       +N ++ QG CGSCWA S       R+         +  N      +  
Sbjct: 104 DWRDK-----GIVNKIKDQGQCGSCWAFSAIQASESRY---------AQANKQLLDLAEQ 149

Query: 219 DVLACSPE-KGCSGGWPHKAWDSI 241
           +++ C     GC+GGWP KA D +
Sbjct: 150 NIVDCVTSCYGCNGGWPSKAIDYV 173
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1245g014104
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12794g065654
         (196 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1164g013389
         (189 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1246g014122
         (161 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12663g065299
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12336g064417
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12248g064165
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff128g002336
         (509 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11g000311
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12098g063754
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12004g063487
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1289g014481
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11704g062596
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11652g062442
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11689g062562
         (219 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11464g061908
         (230 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11917g063214
         (953 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]            48   1e-06
AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]             48   1e-06
>M.Javanica_Scaff11917g063214 on AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/27 (74%), Positives = 25/27 (92%)

Query: 47 IGIDLGTSFTCVGVYKNGRVEIIANDQ 73
          +GIDLGT+++CVGV+KN  VEIIANDQ
Sbjct: 7  VGIDLGTTYSCVGVWKNDAVEIIANDQ 33
>M.Javanica_Scaff11917g063214 on AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/27 (74%), Positives = 25/27 (92%)

Query: 47 IGIDLGTSFTCVGVYKNGRVEIIANDQ 73
          +GIDLGT+++CVGV+KN  VEIIANDQ
Sbjct: 7  VGIDLGTTYSCVGVWKNDAVEIIANDQ 33
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1198g013680
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11862g063067
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11760g062770
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1282g014418
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11900g063169
         (318 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11646g062420
         (121 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11797g062876
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12874g065878
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12453g064722
         (222 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1149g013248
         (418 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff123g002258
         (97 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12228g064116
         (482 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348250  Plasmepsin II  (Proteases)  [Plasmodium falciparum]     179   5e-52
XP_001348249  Plasmepsin I  (Proteases)  [Plasmodium falciparum]      171   7e-49
AAW71459  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         157   9e-44
AAW71463  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         157   9e-44
AAW71460  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         156   1e-43
AAW71461  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         156   2e-43
AAW71462  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         156   2e-43
AAW71454  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   127   6e-33
AAW71455  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   127   6e-33
AAW71456  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   127   6e-33
AAW71457  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   127   6e-33
AAW71458  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   127   6e-33
CAC20154  Eimepsin  (Protease)  [Eimeria tenella]                      90   3e-21
AAS90844  Toxomepsin 2  (Protease)  [Toxoplasma gondii]                87   2e-20
>M.Javanica_Scaff12228g064116 on XP_001348250  Plasmepsin II  (Proteases)  [Plasmodium falciparum]
          Length = 453

 Score =  179 bits (454), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 169/333 (50%), Gaps = 17/333 (5%)

Query: 110 LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHHXXXXXXXXX 169
           L ++ +  +YG   +G   Q F+ I DTGS+NLWVPS KC      CL  H         
Sbjct: 132 LVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT--TAGCLTKHLYDSSKSRT 189

Query: 170 XXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGL--TFVAAKFDGIL 227
               G K+++ Y +G++ GF SKD V + N+ +   +F E +   G   T+ A+ FDGIL
Sbjct: 190 YEKDGTKVEMNYVSGTVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGIL 248

Query: 228 GMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGGTDKRRYVEPL 287
           G+ + ++S+  V P+  ++ +Q K+   +F+F+L    + K  G +TIGG ++R Y  PL
Sbjct: 249 GLGWKDLSIGSVDPIVVELKNQNKIENALFTFYL--PVHDKHTGFLTIGGIEERFYEGPL 306

Query: 288 NYTPVTRKAYWQFKMEG-VHNSNGEKIACQNGCEAIADTGTSLIAGPKAQIEEIQHYIGA 346
            Y  +    YWQ  ++  V N   EK  C      I D+GTS I  P   + ++   +  
Sbjct: 307 TYEKLNHDLYWQITLDAHVGNIMLEKANC------IVDSGTSAITVPTDFLNKMLQNLDV 360

Query: 347 IPLMHGEYMVSCERVPRLPEISLVIGGHSYVLKGSDYILNVTAMGKSICLSGFMGIDLPA 406
           I +    + V+     +LP          Y L+   Y+ ++  +G  +C+   +G+D P 
Sbjct: 361 IKVPFLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFPV 420

Query: 407 KVGELWILGDVFIGRYYTVFDVGQQRIGLAQAR 439
                +ILGD F+ +Y+TVFD   Q +G+A A+
Sbjct: 421 PT---FILGDPFMRKYFTVFDYDNQSVGIALAK 450
>M.Javanica_Scaff12228g064116 on XP_001348249  Plasmepsin I  (Proteases)  [Plasmodium falciparum]
          Length = 452

 Score =  171 bits (432), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 165/336 (49%), Gaps = 19/336 (5%)

Query: 110 LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHHXXXXXXXXX 169
           L +  +  YYG   IG   Q F+ IFDTGS+NLWVPS +C    I C   +         
Sbjct: 131 LNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN--TIGCKTKNLYDSNKSKT 188

Query: 170 XXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGL--TFVAAKFDGIL 227
               G K+++ Y +G++ GF SKD V IAN+     +F E     G    +   +FDGI+
Sbjct: 189 YEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSFP-YKFIEVTDTNGFEPAYTLGQFDGIV 247

Query: 228 GMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGGTDKRRYVEPL 287
           G+ + ++S+  V PV  ++ +Q K+ + VF+F+L  D   K  G +TIGG + R Y   L
Sbjct: 248 GLGWKDLSIGSVDPVVVELKNQNKIEQAVFTFYLPFDDKHK--GYLTIGGIEDRFYEGQL 305

Query: 288 NYTPVTRKAYWQFKMEGVHNSNGEKIACQNGCEAIADTGTSLIAGPKAQIEEIQHYIGA- 346
            Y  +    YWQ  ++ +H  N           AI D+GTS I  P   + +    +   
Sbjct: 306 TYEKLNHDLYWQVDLD-LHFGN----LTVEKATAIVDSGTSSITAPTEFLNKFFEGLDVV 360

Query: 347 -IPLMHGEYMVSCERVPRLPEISLVIGGHSYVLKGSDYILNVTAMGKSICLSGFMGIDLP 405
            IP +   Y+ +C   P+LP +      + Y L+   Y+  +   G S+C+   + +DL 
Sbjct: 361 KIPFL-PLYITTCNN-PKLPTLEFRSATNVYTLEPEYYLQQIFDFGISLCMVSIIPVDLN 418

Query: 406 AKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARDE 441
                 +ILGD F+ +Y+TVFD     +G A A+ +
Sbjct: 419 KNT---FILGDPFMRKYFTVFDYDNHTVGFALAKKK 451
>M.Javanica_Scaff12228g064116 on AAW71459  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  157 bits (396), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 174/347 (50%), Gaps = 26/347 (7%)

Query: 102 IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 160
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 161 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGL--TF 218
                        G K++I YG+G+++G+ SKD + + ++ +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 219 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGGT 278
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYL--PVHDKHVGYLTIGGI 294

Query: 279 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSNGEKIACQNGCEAIADTGTSLIAGPKAQIE 338
           +   Y  PL Y  +    YWQ  ++ +H     K   Q    A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFG---KYVMQK-ANAVVDSGTSTITAPTSFLN 349

Query: 339 EIQHYIGAI-----PLMHGEYMVSCERVPRLPEISLVIGGHSYVLKGSDYILNVTAMGKS 393
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFRDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 394 ICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 440
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff12228g064116 on AAW71463  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  157 bits (396), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 174/347 (50%), Gaps = 26/347 (7%)

Query: 102 IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 160
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 161 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGL--TF 218
                        G K++I YG+G+++G+ SKD + + ++ +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 219 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGGT 278
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYL--PVHDKHVGYLTIGGI 294

Query: 279 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSNGEKIACQNGCEAIADTGTSLIAGPKAQIE 338
           +   Y  PL Y  +    YWQ  ++ +H     K   Q    A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFG---KYVMQK-ANAVVDSGTSTITAPTSFLN 349

Query: 339 EIQHYIGAI-----PLMHGEYMVSCERVPRLPEISLVIGGHSYVLKGSDYILNVTAMGKS 393
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFRDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 394 ICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 440
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff12228g064116 on AAW71460  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  156 bits (394), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 174/347 (50%), Gaps = 26/347 (7%)

Query: 102 IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 160
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 161 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGL--TF 218
                        G K++I YG+G+++G+ SKD + + ++ +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 219 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGGT 278
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYL--PVHDKHVGYLTIGGI 294

Query: 279 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSNGEKIACQNGCEAIADTGTSLIAGPKAQIE 338
           +   Y  PL Y  +    YWQ  ++ +H     K   Q    A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFG---KYVMQK-ANAVVDSGTSTITAPTSFLN 349

Query: 339 EIQHYIGAI-----PLMHGEYMVSCERVPRLPEISLVIGGHSYVLKGSDYILNVTAMGKS 393
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFTDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 394 ICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 440
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff12228g064116 on AAW71461  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  156 bits (394), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 174/347 (50%), Gaps = 26/347 (7%)

Query: 102 IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 160
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 161 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGL--TF 218
                        G K++I YG+G+++G+ SKD + + ++ +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 219 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGGT 278
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYLPV--HDKHVGYLTIGGI 294

Query: 279 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSNGEKIACQNGCEAIADTGTSLIAGPKAQIE 338
           +   Y  PL Y  +    YWQ  ++ +H     K   Q    A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFG---KYVMQK-ANAVVDSGTSTITAPTSFLN 349

Query: 339 EIQHYIGAI-----PLMHGEYMVSCERVPRLPEISLVIGGHSYVLKGSDYILNVTAMGKS 393
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFTDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 394 ICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 440
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff12228g064116 on AAW71462  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  156 bits (394), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 174/347 (50%), Gaps = 26/347 (7%)

Query: 102 IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 160
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 161 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGL--TF 218
                        G K++I YG+G+++G+ SKD + + ++ +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 219 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGGT 278
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYLPV--HDKHVGYLTIGGI 294

Query: 279 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSNGEKIACQNGCEAIADTGTSLIAGPKAQIE 338
           +   Y  PL Y  +    YWQ  ++ +H     K   Q    A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFG---KYVMQK-ANAVVDSGTSTITAPTSFLN 349

Query: 339 EIQHYIGAI-----PLMHGEYMVSCERVPRLPEISLVIGGHSYVLKGSDYILNVTAMGKS 393
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFTDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 394 ICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 440
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff12228g064116 on AAW71454  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  127 bits (318), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 159/345 (46%), Gaps = 22/345 (6%)

Query: 102 IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 160
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 161 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQ--EFAEAVS-EPGLT 217
                           +++    G++ G  SKD V I  + V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 218 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGG 277
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 278 TDKRRYVEPLNYTPVTRKAYWQFKMEGVHNSNGEKIACQNGCEAIADTGTSLIAGPKAQI 337
            ++R +  PLNY  +     WQ  ++ VH  N            I D+ TS+I  P    
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGN----VSSKKANVILDSATSVITVPTEFF 350

Query: 338 EEI--QHYIGAIPLMHGEYMVSCERVPRLPEISLVIGGHSYVLKGSDYILNVTAMGKSIC 395
            +      +  +P +   Y+ +C    +LP +        Y L+   Y+  +  +  ++C
Sbjct: 351 NQFVESASVFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFSALC 408

Query: 396 LSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 440
           +   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 409 MLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff12228g064116 on AAW71455  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  127 bits (318), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 159/345 (46%), Gaps = 22/345 (6%)

Query: 102 IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 160
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 161 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQ--EFAEAVS-EPGLT 217
                           +++    G++ G  SKD V I  + V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 218 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGG 277
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 278 TDKRRYVEPLNYTPVTRKAYWQFKMEGVHNSNGEKIACQNGCEAIADTGTSLIAGPKAQI 337
            ++R +  PLNY  +     WQ  ++ VH  N            I D+ TS+I  P    
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGN----VSSKKANVILDSATSVITVPTEFF 350

Query: 338 EEI--QHYIGAIPLMHGEYMVSCERVPRLPEISLVIGGHSYVLKGSDYILNVTAMGKSIC 395
            +      +  +P +   Y+ +C    +LP +        Y L+   Y+  +  +  ++C
Sbjct: 351 NQFVESASVFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFSALC 408

Query: 396 LSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 440
           +   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 409 MLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff12228g064116 on AAW71456  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  127 bits (318), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 159/345 (46%), Gaps = 22/345 (6%)

Query: 102 IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 160
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 161 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQ--EFAEAVS-EPGLT 217
                           +++    G++ G  SKD V I  + V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 218 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGG 277
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 278 TDKRRYVEPLNYTPVTRKAYWQFKMEGVHNSNGEKIACQNGCEAIADTGTSLIAGPKAQI 337
            ++R +  PLNY  +     WQ  ++ VH  N            I D+ TS+I  P    
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGN----VSSKKANVILDSATSVITVPTEFF 350

Query: 338 EEI--QHYIGAIPLMHGEYMVSCERVPRLPEISLVIGGHSYVLKGSDYILNVTAMGKSIC 395
            +      +  +P +   Y+ +C    +LP +        Y L+   Y+  +  +  ++C
Sbjct: 351 NQFVESASVFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFSALC 408

Query: 396 LSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 440
           +   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 409 MLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff12228g064116 on AAW71457  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  127 bits (318), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 159/345 (46%), Gaps = 22/345 (6%)

Query: 102 IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 160
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 161 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQ--EFAEAVS-EPGLT 217
                           +++    G++ G  SKD V I  + V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 218 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGG 277
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 278 TDKRRYVEPLNYTPVTRKAYWQFKMEGVHNSNGEKIACQNGCEAIADTGTSLIAGPKAQI 337
            ++R +  PLNY  +     WQ  ++ VH  N            I D+ TS+I  P    
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGN----VSSKKANVILDSATSVITVPTEFF 350

Query: 338 EEI--QHYIGAIPLMHGEYMVSCERVPRLPEISLVIGGHSYVLKGSDYILNVTAMGKSIC 395
            +      +  +P +   Y+ +C    +LP +        Y L+   Y+  +  +  ++C
Sbjct: 351 NQFVESASVFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFSALC 408

Query: 396 LSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 440
           +   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 409 MLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff12228g064116 on AAW71458  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  127 bits (318), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 159/345 (46%), Gaps = 22/345 (6%)

Query: 102 IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 160
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 161 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQ--EFAEAVS-EPGLT 217
                           +++    G++ G  SKD V I  + V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 218 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGG 277
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 278 TDKRRYVEPLNYTPVTRKAYWQFKMEGVHNSNGEKIACQNGCEAIADTGTSLIAGPKAQI 337
            ++R +  PLNY  +     WQ  ++ VH  N            I D+ TS+I  P    
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGN----VSSKKANVILDSATSVITVPTEFF 350

Query: 338 EEI--QHYIGAIPLMHGEYMVSCERVPRLPEISLVIGGHSYVLKGSDYILNVTAMGKSIC 395
            +      +  +P +   Y+ +C    +LP +        Y L+   Y+  +  +  ++C
Sbjct: 351 NQFVESASVFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFSALC 408

Query: 396 LSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 440
           +   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 409 MLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff12228g064116 on CAC20154  Eimepsin  (Protease)  [Eimeria tenella]
          Length = 255

 Score = 89.7 bits (221), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 15/167 (8%)

Query: 108 EMLRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHHXXXXXXX 167
           + L NY ++QY+G I IG+P + F V+FDTGSSNLWVP+ +C      C  H        
Sbjct: 92  QKLLNYHNSQYFGEIKIGTPGRRFVVVFDTGSSNLWVPAAEC--EKGGCAPHEKFDPKYS 149

Query: 168 XXXXXXGRKMQ-------IQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGLTFVA 220
                  R +        IQYGTG+    + +D V I  I V  Q    AV E    F  
Sbjct: 150 STFSPI-RSLTGDPAVAFIQYGTGACVLRMGRDIVEIGGIKVPNQAIGLAVEESTHPFAD 208

Query: 221 AKFDGILGMAFPEIS-----VLGVQPVFQQMISQQKVPEPVFSFWLN 262
             FDG++G+ FP++S          P+  QM+ ++ +   VFS +++
Sbjct: 209 LPFDGLVGLGFPDVSGEEGLPSSALPIVDQMVKEKVLDRNVFSVYMS 255
>M.Javanica_Scaff12228g064116 on AAS90844  Toxomepsin 2  (Protease)  [Toxoplasma gondii]
          Length = 255

 Score = 87.4 bits (215), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 16/193 (8%)

Query: 57  RSMLAQVGSLE--LFAKHRHDAL-RRRFALFAEKEAGQVEFDEENAVQIGG-----EIDE 108
           + + AQ GS+E  LF K   + L + R+     K+      +   A+  G      +  +
Sbjct: 35  QEIFAQTGSVEESLFHKPEFNVLLKNRYQETGLKDFISRLLEHHGALATGKHDAAQKAHQ 94

Query: 109 MLRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHHXXXXXXXX 168
            L N+ ++QY+G I +G+PP +F V+FDTGSSNLW+P+ +C      C+ H         
Sbjct: 95  ELLNFHNSQYFGEIQVGTPPVSFIVVFDTGSSNLWIPASEC--KQGGCVPHTRFDPKTSS 152

Query: 169 XXXXXGRKMQ------IQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGLTFVAAK 222
                           IQYGTG+    ++KDTV I  I V  Q    A+ E    F    
Sbjct: 153 TYLPINAGAGEPAIAFIQYGTGACVLRMAKDTVSIGGIRVQNQTLGLALQESVHPFADLP 212

Query: 223 FDGILGMAFPEIS 235
           FDG++G+ FP+++
Sbjct: 213 FDGLVGLGFPDVA 225
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1212g013817
         (324 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1176g013488
         (427 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12409g064607
         (170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11509g062012
         (178 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12809g065706
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1259g014233
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1183g013552
         (170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12843g065787
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12916g066013
         (261 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12417g064631
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12013g063517
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12210g064062
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12513g064904
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11914g063204
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11685g062546
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12320g064381
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1198g013677
         (262 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12417g064630
         (413 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff128g002342
         (304 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11442g061843
         (238 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12258g064196
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11525g062060
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1277g014365
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1229g013954
         (418 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12900g065958
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12084g063702
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12898g065945
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12361g064483
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12637g065223
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12418g064638
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12010g063505
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11476g061936
         (502 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11659g062466
         (335 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12624g065189
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12297g064306
         (208 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1198g013678
         (193 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1276g014358
         (97 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11649g062431
         (207 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11657g062458
         (197 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1160g013343
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1270g014317
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11533g062079
         (97 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12474g064790
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1290g014485
         (611 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1258g014219
         (216 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12286g064283
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1253g014184
         (449 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1188g013589
         (273 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12207g064053
         (200 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12901g065959
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11553g062138
         (2031 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12018g063531
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11723g062659
         (172 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11784g062837
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12030g063560
         (128 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12563g065028
         (294 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11600g062291
         (244 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1158g013332
         (266 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12117g063803
         (159 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12860g065836
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11693g062572
         (356 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11517g062030
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12397g064575
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12867g065859
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1291g014493
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12832g065760
         (249 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12876g065883
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12351g064461
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12606g065134
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11607g062314
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12264g064211
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12283g064270
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12444g064701
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1285g014445
         (312 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1233g013983
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12271g064233
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12867g065857
         (596 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12437g064681
         (208 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12918g066015
         (135 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1273g014330
         (200 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12749g065535
         (322 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11463g061904
         (245 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12204g064044
         (210 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1227g013946
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12100g063760
         (335 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12339g064427
         (169 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12339g064426
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11704g062599
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12895g065932
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12561g065025
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12636g065222
         (283 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11688g062557
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11598g062284
         (208 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11678g062527
         (146 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11445g061853
         (393 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12588g065094
         (235 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1268g014301
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11804g062898
         (298 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12175g063955
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11660g062469
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12469g064781
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12405g064599
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11506g062001
         (354 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1191g013616
         (238 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11558g062150
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1210g013795
         (272 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12052g063632
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11545g062116
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12565g065033
         (349 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11723g062661
         (184 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11545g062117
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11450g061867
         (250 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11840g063004
         (264 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1240g014050
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12720g065462
         (445 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1176g013490
         (260 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1148g013233
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff114g002119
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11532g062075
         (548 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11592g062260
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12031g063562
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12685g065365
         (169 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11888g063144
         (161 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11722g062657
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12090g063727
         (362 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12702g065410
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11471g061926
         (185 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12224g064101
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff121g002227
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12219g064085
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12228g064117
         (410 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12215g064072
         (436 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff121g002224
         (255 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1259g014232
         (924 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1243g014080
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1249g014146
         (2506 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11880g063114
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12351g064463
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1264g014276
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11993g063449
         (251 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1195g013651
         (256 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11680g062530
         (327 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11989g063438
         (304 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1158g013331
         (290 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12808g065703
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1275g014350
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12883g065894
         (1114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1158g013333
         (289 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11672g062500
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1223g013918
         (307 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12208g064055
         (188 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11804g062899
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12803g065678
         (285 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12076g063689
         (237 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1148g013232
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11967g063377
         (226 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1176g013489
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1254g014192
         (161 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1239g014045
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12327g064394
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1282g014415
         (604 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11522g062046
         (297 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11688g062559
         (258 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12116g063800
         (196 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAA29776  TRAP  (Invasion)  [Plasmodium falciparum]                    52   3e-09
AAA29774  TRAP  (Invasion)  [Plasmodium falciparum]                    52   3e-09
AAQ11895  TRAP  (Invasion)  [Plasmodium falciparum]                    52   3e-09
AAQ11894  TRAP  (Invasion)  [Plasmodium falciparum]                    50   2e-08
AAA29770  TRAP  (Invasion)  [Plasmodium falciparum]                    49   3e-08
AAQ11891  TRAP  (Invasion)  [Plasmodium falciparum]                    49   4e-08
AAA29777  TRAP  (Invasion)  [Plasmodium falciparum]                    49   5e-08
AAD03350  MIC1  (Adhesin)  [Eimeria tenella]                           43   3e-06
>M.Javanica_Scaff12116g063800 on AAA29776  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 52.4 bits (124), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 13/144 (9%)

Query: 27  DVLFVLDSTGSVR--NVYEAQRGYILDVVQQMDIASDGQHVGLIIYSSKLRQRIVVNLDE 84
           D+  ++D +GS+R  N         + ++QQ+++  +  H+ L I+S+  R+ I ++ D 
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNENAIHLYLNIFSNNAREIIRLHSDA 107

Query: 85  SLTREQFLKIVH-----ELPYHGGITATGAALSLTIKALEKR--RPSKRTLVILLTDGF- 136
           S  +E+ L I+       LPY  G T    AL    K L  R  R +   LV++LTDG  
Sbjct: 108 SKNKEKALIIIKSLLSTNLPY--GRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 137 -TYDDWEEQSRTLLSKGVEVIVAG 159
            +  D  ++SR L  +GV++ V G
Sbjct: 166 DSIQDSLKESRKLNDRGVKIAVFG 189
>M.Javanica_Scaff12116g063800 on AAA29774  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 52.4 bits (124), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 13/144 (9%)

Query: 27  DVLFVLDSTGSVR--NVYEAQRGYILDVVQQMDIASDGQHVGLIIYSSKLRQRIVVNLDE 84
           D+  ++D +GS+R  N         + ++QQ+++  +  H+ L I+S+  R+ I ++ D 
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNENAIHLYLNIFSNNAREIIRLHSDA 107

Query: 85  SLTREQFLKIVH-----ELPYHGGITATGAALSLTIKALEKR--RPSKRTLVILLTDGF- 136
           S  +E+ L I+       LPY  G T    AL    K L  R  R +   LV++LTDG  
Sbjct: 108 SKNKEKALIIIKSLLSTNLPY--GRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 137 -TYDDWEEQSRTLLSKGVEVIVAG 159
            +  D  ++SR L  +GV++ V G
Sbjct: 166 DSIQDSLKESRKLNDRGVKIAVFG 189
>M.Javanica_Scaff12116g063800 on AAQ11895  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 52.4 bits (124), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 13/144 (9%)

Query: 27  DVLFVLDSTGSVR--NVYEAQRGYILDVVQQMDIASDGQHVGLIIYSSKLRQRIVVNLDE 84
           D+  ++D +GS+R  N         + ++QQ+++  +  H+ L I+S+  R+ I ++ D 
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNENAIHLYLNIFSNNAREIIRLHSDA 107

Query: 85  SLTREQFLKIVH-----ELPYHGGITATGAALSLTIKALEKR--RPSKRTLVILLTDGF- 136
           S  +E+ L I+       LPY  G T    AL    K L  R  R +   LV++LTDG  
Sbjct: 108 SKNKEKALIIIKSLLSTNLPY--GRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 137 -TYDDWEEQSRTLLSKGVEVIVAG 159
            +  D  ++SR L  +GV++ V G
Sbjct: 166 DSIQDSLKESRKLNDRGVKIAVFG 189
>M.Javanica_Scaff12116g063800 on AAQ11894  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 50.1 bits (118), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 13/144 (9%)

Query: 27  DVLFVLDSTGSVR--NVYEAQRGYILDVVQQMDIASDGQHVGLIIYSSKLRQRIVVNLDE 84
           D+  ++D +GS+R  N  +      + ++QQ+++  +  H+ + I+S+  ++ I ++ D 
Sbjct: 48  DLYLLMDCSGSIRRHNWVKHAVPLAMKLIQQLNLNENAIHLYVNIFSNNAKEIIRLHSDA 107

Query: 85  SLTREQFLKIVH-----ELPYHGGITATGAALSLTIKALEKR--RPSKRTLVILLTDGF- 136
           S  +E+ L I+       LPY  G T    AL    K L  R  R +   LV++LTDG  
Sbjct: 108 SKNKEKALIIIKSLLSTNLPY--GRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 137 -TYDDWEEQSRTLLSKGVEVIVAG 159
            +  D  ++SR L  +GV++ V G
Sbjct: 166 DSIQDSLKESRKLNDRGVKIAVFG 189
>M.Javanica_Scaff12116g063800 on AAA29770  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 49.3 bits (116), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 13/144 (9%)

Query: 27  DVLFVLDSTGSVR--NVYEAQRGYILDVVQQMDIASDGQHVGLIIYSSKLRQRIVVNLDE 84
           D+  ++D +GS+R  N  +      + ++QQ+++  +  H+   I+S+  ++ I ++ D 
Sbjct: 48  DLYLLMDCSGSIRRHNWVKHAVPLAMKLIQQLNLNENAIHLYANIFSNNAKEIIRLHSDA 107

Query: 85  SLTREQFLKIVH-----ELPYHGGITATGAALSLTIKALEKR--RPSKRTLVILLTDGF- 136
           S  +E+ L I+       LPY  G T    AL    K L  R  R +   LV++LTDG  
Sbjct: 108 SKNKEKALIIIKSLLSTNLPY--GRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 137 -TYDDWEEQSRTLLSKGVEVIVAG 159
            +  D  ++SR L  +GV++ V G
Sbjct: 166 DSIQDSLKESRKLNDRGVKIAVFG 189
>M.Javanica_Scaff12116g063800 on AAQ11891  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 48.9 bits (115), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 13/144 (9%)

Query: 27  DVLFVLDSTGSVR--NVYEAQRGYILDVVQQMDIASDGQHVGLIIYSSKLRQRIVVNLDE 84
           D+  ++D +GS+R  N         + ++QQ+++  +  H+ + I+S+  ++ I ++ D 
Sbjct: 48  DLYLLMDCSGSIRRHNWVNHAVPLAMKLIQQLNLNENTIHLYVNIFSNNAKEIIRLHSDA 107

Query: 85  SLTREQFLKIVH-----ELPYHGGITATGAALSLTIKALEKR--RPSKRTLVILLTDGF- 136
           S  +E+ L I+       LPY  G T    AL    K L  R  R +   LV++LTDG  
Sbjct: 108 SKNKEKALIIIKSLLSTNLPY--GRTNLSDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 137 -TYDDWEEQSRTLLSKGVEVIVAG 159
            +  D  ++SR L  +GV++ V G
Sbjct: 166 DSIQDSLKESRKLNDRGVKIAVFG 189
>M.Javanica_Scaff12116g063800 on AAA29777  TRAP  (Invasion)  [Plasmodium falciparum]
          Length = 559

 Score = 48.9 bits (115), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 13/144 (9%)

Query: 27  DVLFVLDSTGSVR--NVYEAQRGYILDVVQQMDIASDGQHVGLIIYSSKLRQRIVVNLDE 84
           D+  ++D +GS+R  N  +      + ++QQ+++  +  H+   I+S+  ++ I ++ D 
Sbjct: 48  DLYLLMDCSGSIRRHNWVKHAVPLAMKLIQQLNLNENAIHLYANIFSNNAKEIIRLHSDA 107

Query: 85  SLTREQFLKIVH-----ELPYHGGITATGAALSLTIKALEKR--RPSKRTLVILLTDGF- 136
           S  +E+ L I+       LPY  G T    AL    K L  R  R +   LV++LTDG  
Sbjct: 108 SKNKEKALIIIKSLLSTNLPY--GRTNLTDALLQVRKHLNDRINRENANQLVVILTDGIP 165

Query: 137 -TYDDWEEQSRTLLSKGVEVIVAG 159
            +  D  ++SR L  +GV++ V G
Sbjct: 166 DSIQDSLKESRKLNDRGVKIAVFG 189
>M.Javanica_Scaff12116g063800 on AAD03350  MIC1  (Adhesin)  [Eimeria tenella]
          Length = 255

 Score = 43.1 bits (100), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 5/114 (4%)

Query: 27  DVLFVLDSTGSV-RNVYEAQRGYILDVVQQMDIASDGQHVGLIIYSSKLRQRIVVNLDES 85
           DV+ V+D +GS+  + +   R +I D V  M I+ +   VGLI ++++ + R  ++  ++
Sbjct: 50  DVMLVVDESGSIGTSNFRKVRQFIEDFVNSMPISPEDVRVGLITFATRSKVRWNLSDPKA 109

Query: 86  LTREQFLKIVHELPYHGGITATGAALSLTIKALEKRRPSKRT----LVILLTDG 135
                 +     L Y  G+T T   L    K L       R     LV+++TDG
Sbjct: 110 TNPSLAISAARSLSYSTGVTYTHYGLQDAKKLLYDTNAGARNNVPKLVLVMTDG 163
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11593g062265
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12622g065180
         (316 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1281g014409
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff121g002222
         (678 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11559g062156
         (203 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1166g013411
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11987g063430
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff123g002265
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1210g013798
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12836g065769
         (326 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11657g062459
         (280 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff123g002262
         (87 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12580g065070
         (317 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1202g013714
         (424 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12080g063698
         (159 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12567g065038
         (193 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11649g062433
         (426 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12465g064762
         (235 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff124g002279
         (226 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11804g062897
         (314 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1233g013984
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12919g066020
         (233 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11533g062078
         (241 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12222g064096
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12412g064612
         (159 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12397g064574
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11760g062772
         (200 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12010g063508
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11868g063083
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1266g014285
         (211 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11893g063151
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff128g002334
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11514g062024
         (435 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff116g002146
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11764g062787
         (196 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11883g063124
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12121g063816
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11711g062625
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff117g002156
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12875g065880
         (595 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12459g064744
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11933g063271
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12358g064478
         (507 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff123g002268
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12303g064333
         (175 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12052g063634
         (129 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1157g013315
         (154 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11491g061968
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1163g013379
         (277 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12390g064556
         (333 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11617g062343
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12085g063708
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1261g014248
         (251 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12906g065984
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12765g065576
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1200g013699
         (418 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12502g064876
         (298 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11g000312
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12468g064773
         (156 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12746g065526
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12228g064115
         (424 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11943g063303
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11804g062896
         (87 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1264g014274
         (521 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11834g062989
         (279 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1197g013676
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11700g062589
         (349 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1219g013878
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12698g065400
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12694g065391
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12423g064649
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12179g063968
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1220g013886
         (658 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11879g063110
         (556 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12399g064578
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11569g062193
         (292 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12526g064935
         (282 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12470g064783
         (97 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12409g064610
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff127g002320
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff123g002267
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12462g064752
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11905g063178
         (243 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1178g013500
         (224 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1237g014028
         (320 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11564g062172
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1243g014088
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12438g064685
         (357 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11803g062894
         (120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12858g065824
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12586g065088
         (279 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12644g065250
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11812g062921
         (188 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12340g064430
         (163 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11723g062660
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12227g064113
         (340 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11509g062010
         (120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12411g064611
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12770g065591
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12528g064941
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12894g065928
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12009g063503
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12707g065424
         (263 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12283g064271
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11570g062194
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11680g062529
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11895g063155
         (549 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1183g013551
         (451 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1235g014005
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1165g013402
         (258 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11888g063142
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1166g013410
         (335 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11911g063196
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff127g002321
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12655g065279
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12089g063722
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11632g062382
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11g000319
         (384 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff123g002266
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12008g063498
         (695 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1187g013573
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1192g013632
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11553g062139
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12898g065946
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11976g063401
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12276g064248
         (144 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff11851g063034
         (175 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff160g002778
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13066g066388
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14806g070835
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1340g014896
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16145g073931
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13582g067704
         (195 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15202g071779
         (201 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13671g067969
         (185 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15216g071809
         (190 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14359g069702
         (128 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1508g016231
         (436 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15759g073093
         (323 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff153g002687
         (323 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13457g067381
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13384g067213
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15642g072812
         (87 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13377g067192
         (246 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13707g068069
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13019g066277
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1416g015519
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15444g072339
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1499g016164
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13668g067958
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15136g071616
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16088g073822
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15816g073220
         (264 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1444g015759
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13216g066802
         (362 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14542g070144
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13191g066734
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15055g071435
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1464g015905
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14675g070465
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13125g066541
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15662g072865
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13178g066692
         (340 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14863g070957
         (326 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16126g073892
         (510 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15820g073228
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1418g015530
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13226g066828
         (244 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14302g069554
         (204 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13455g067376
         (252 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15759g073095
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1468g015939
         (322 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14340g069654
         (623 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15394g072224
         (341 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13499g067490
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13g000359
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13542g067603
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13827g068380
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15307g072023
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16053g073750
         (167 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1346g014936
         (259 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14726g070604
         (633 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14608g070305
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13659g067929
         (402 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1428g015613
         (402 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13155g066612
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13127g066547
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff160g002782
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1369g015135
         (419 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14039g068898
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16147g073936
         (1404 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14570g070213
         (414 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1556g016628
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15609g072743
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12925g066042
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13553g067630
         (234 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff144g002561
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14953g071177
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14610g070313
         (232 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1292g014503
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13012g066259
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1433g015651
         (469 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13931g068632
         (157 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14769g070729
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14091g069022
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1449g015795
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1386g015262
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13287g066966
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14488g070024
         (149 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13785g068269
         (129 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16189g074017
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1403g015401
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14112g069075
         (299 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13839g068405
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15501g072498
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1407g015441
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15164g071684
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1340g014893
         (460 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff142g002522
         (323 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15654g072847
         (276 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 56   8e-10
>M.Javanica_Scaff15654g072847 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 55.8 bits (133), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)

Query: 97  DIVLLIDMSGG-AVDK-REHYLALASDLVRQLDIGVYSAQVALVRYSGRGRTDTVFRLKN 154
           D+ L++D S    +DK ++  +  A  ++  L+I      V ++R++   +TD  +  + 
Sbjct: 305 DLTLILDESRSITLDKWKKDVVPFAEKVLNNLNIDKDKIHVGIMRFAKSMKTDIGYEQET 364

Query: 155 RHNQTSLIN---ELSQIQALGGTTRTKEAMLHAKREFEKKFGGREKADKIMIVFTDG--- 208
           R+ +  LI    EL      GG T   +A+ ++ + F +    R  A K+ I+FTDG   
Sbjct: 365 RYMKNDLIKLVRELKDKYGYGGATHLVDALQYSLKTFTRHPNNRVDAPKVTILFTDGNET 424

Query: 209 -YSQDDPSDIAADFRKEKIHIYAVAVE---DEELK------PNEEQLKVI 248
              + D  D+   +RKE + +  V V    ++ LK       NEE L+VI
Sbjct: 425 SKKEKDIRDVGLLYRKENVKLIVVGVNLATEKSLKLLAGCTENEECLRVI 474

 Score = 40.8 bits (94), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 79/167 (47%), Gaps = 15/167 (8%)

Query: 94  CQ--VDIVLLIDMSG--GAVDKREHYLALASDLVRQLDIGVYSAQVALVRYSGRGRTDTV 149
           CQ   D+ L++D S   G+ + + H +     +++ L I      V ++ +S + R    
Sbjct: 80  CQNYYDLTLILDESASIGSKNWKNHVIPFTDKIIKDLTISKNEVHVGILLFSSKNRDYVT 139

Query: 150 FRLKNRHNQTSLINELSQIQA---LGGTTRTKEAMLHAKREFEKKFGGREKADKIMIVFT 206
           +  + R+ +  L+ ++ +++     GG T+   A+ ++   + K    R  A K+ I+FT
Sbjct: 140 YGDELRYQKDELLKKVEKLKKDYYCGGGTKILGALKYSLENYTKHKNIRYDAPKVTILFT 199

Query: 207 DG----YSQDDPSDIAADFRKEKIHIYAVAVEDEELKPNEEQLKVIA 249
           DG     S     ++   +R+E++ +  + V   E    + +LK+IA
Sbjct: 200 DGNENSASNKQLLEMGLTYRRERVKLLVLGVAAAE----DNKLKLIA 242
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1441g015729
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15638g072803
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15935g073473
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15732g073032
         (336 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16034g073700
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1441g015728
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13236g066848
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13980g068739
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1449g015799
         (146 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14962g071197
         (618 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13303g067000
         (431 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14991g071270
         (274 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff160g002784
         (285 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13904g068564
         (658 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16158g073951
         (322 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15834g073263
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13565g067660
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1351g014969
         (208 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1485g016075
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13609g067795
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15021g071339
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13706g068063
         (281 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1333g014836
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13864g068470
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14753g070682
         (169 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15259g071919
         (203 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13587g067722
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1327g014789
         (231 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1575g016770
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff153g002681
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14750g070678
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14246g069406
         (198 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1339g014882
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14211g069316
         (212 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13415g067282
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15076g071484
         (180 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15313g072040
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1408g015444
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14515g070081
         (144 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16099g073843
         (211 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1428g015612
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14072g068980
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13185g066714
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14850g070927
         (212 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1513g016274
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12955g066120
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15174g071713
         (87 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1540g016494
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14115g069080
         (167 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15012g071315
         (332 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13580g067701
         (234 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15635g072796
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14965g071202
         (195 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15340g072106
         (231 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff133g002405
         (152 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13675g067978
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1575g016772
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13399g067243
         (166 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1513g016277
         (608 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13661g067936
         (227 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15286g071979
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1468g015942
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14435g069889
         (256 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15447g072344
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13144g066588
         (536 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15896g073393
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15476g072423
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff160g002790
         (242 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1487g016085
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13493g067478
         (350 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]          159   4e-47
P92132  CP2  (Cysteine protease)  [Giardia duodenalis]                105   1e-27
CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]        79   5e-17
PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]    78   1e-16
ABC02174  Falstatin  (Others)  [Plasmodium falciparum]                 75   5e-16
XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium falc...    75   5e-16
AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    75   5e-16
XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium falc...    75   7e-16
XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]           69   3e-14
AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]           63   1e-12
XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]           55   2e-09
XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]           54   3e-09
CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]            53   6e-09
CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]            52   1e-08
AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]            45   2e-06
CAA38278  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]          39   3e-05
EAN83733  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]          38   4e-05
>M.Javanica_Scaff13493g067478 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score =  159 bits (403), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/333 (34%), Positives = 159/333 (47%), Gaps = 49/333 (14%)

Query: 33  QKIVDDINGLAKGVWTAEVNTITR-LPLIEQKKLCGTIIPEENRNHTQAEPPKVEGTVKG 91
           +  VD +N L +G+W A+ + + + + L E K+L G I   +  N+    P +     + 
Sbjct: 34  KAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVI---KKNNNASILPKRRFTEEEA 90

Query: 92  SCSTKIEFDARTKWSGCSAIIGHIQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTD 151
                  FD+   W  C  I   I DQ  CGSCWAV+ AS  +DR+C          G  
Sbjct: 91  RAPLPSSFDSAEAWPNCPTI-PQIADQSACGSCWAVAAASAMSDRFCT--------MGGV 141

Query: 152 AGSQFSALDVLSC-SMSRDGCQGGWPLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGA 210
                SA D+L+C S   DGC GG P  AW +  S G+ +         C+PYP+     
Sbjct: 142 QDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLVSDY-------CQPYPFPHCSH 194

Query: 211 TPRS-----PCKSACTANWKTP----------YPKDKHFATGAKGLQGNTATVQAIKNEI 255
             +S     PC      N+ TP           P   + +  +  LQG    ++    E+
Sbjct: 195 HSKSKNGYPPCSQF---NFDTPKCNYTCDDPTIPVVNYRSWTSYALQGEDDYMR----EL 247

Query: 256 MTNGPVVACFDVYNDFMSYRSGVYFKTANARKVGGHAVRIIGWGTQTCNGKSMPFWLIAN 315
              GP    FDVY DF++Y SGVY   +  + +GGHAVR++GWGT   NG  +P+W IAN
Sbjct: 248 FFRGPFEVAFDVYEDFIAYNSGVYHHVS-GQYLGGHAVRLVGWGTS--NG--VPYWKIAN 302

Query: 316 SWSTGWGEKGLVKIRSGVNEVGIEKSGIAFGIP 348
           SW+T WG  G   IR G +E GIE  G A GIP
Sbjct: 303 SWNTEWGMDGYFLIRRGSSECGIEDGGSA-GIP 334
>M.Javanica_Scaff13493g067478 on P92132  CP2  (Cysteine protease)  [Giardia duodenalis]
          Length = 255

 Score =  105 bits (263), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 109/246 (44%), Gaps = 28/246 (11%)

Query: 56  RLPLIEQKKLCGTIIPEENRNHTQAEPPKVEGTVKGSCSTKIEFDARTKWSGCSAIIGHI 115
           R   + + ++   ++P     + +   P+  GT          FD R ++  C   I  +
Sbjct: 38  RFEGLTKDEISSLLMPVSFLKNAKGAAPR--GTFTDKDDVPESFDFREEYPHC---IPEV 92

Query: 116 QDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDGCQGGW 175
            DQG CGSCWA S+ +T+ DR C+A   K          ++S   V+SC      C GGW
Sbjct: 93  VDQGGCGSCWAFSSVATFGDRRCVAGLDKKP-------VKYSPQYVVSCDHGDMACNGGW 145

Query: 176 PLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYPKDKHFA 235
             + WK++   G  T   +         PY SG  T R  C + C            H A
Sbjct: 146 LPNVWKFLTKTGTTTDECV---------PYKSGSTTLRGTCPTKCADG-----SSKVHLA 191

Query: 236 TGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANARKVGGHAVRI 295
           T A   +     + A+   + T+GP+   F V++DFM Y SGVY  T    + GGHAV +
Sbjct: 192 T-ATSYKDYGLDIPAMMKALSTSGPLQVAFLVHSDFMYYESGVYQHTYGYME-GGHAVEM 249

Query: 296 IGWGTQ 301
           +G+GT 
Sbjct: 250 VGYGTD 255
>M.Javanica_Scaff13493g067478 on CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 450

 Score = 78.6 bits (192), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 46/227 (20%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDGCQGG 174
           ++DQGQCGSCWA ST      ++ +A          +     S   ++SC     GC GG
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVA---------GNPLVSLSEQMLVSCDTIDFGCGGG 191

Query: 175 WPLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSG-GATPRSPCK-----SACTANWKTPY 228
              +A+ WI +     G ++ T+     YPY SG G  P+         +A T +   P 
Sbjct: 192 LMDNAFNWIVNS---NGGNVFTEAS---YPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQ 245

Query: 229 PKDKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANARKV 288
            +D                  AI   +  NGP+    D    FM Y  G+   T+   + 
Sbjct: 246 DED------------------AIAAYLAENGPLAIAVDA-TSFMDYNGGIL--TSCTSEQ 284

Query: 289 GGHAVRIIGWGTQTCNGKSMPFWLIANSWSTGWGEKGLVKIRSGVNE 335
             H V ++G+     +  + P+W+I NSWS  WGE G ++I  G N+
Sbjct: 285 LDHGVLLVGYN----DSSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQ 327
>M.Javanica_Scaff13493g067478 on PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]
          Length = 569

 Score = 77.8 bits (190), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 99/249 (39%), Gaps = 65/249 (26%)

Query: 111 IIGHIQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDG 170
           I+   +DQG CGSCWA ++       +    AKK +   +     FS  +V+ CS    G
Sbjct: 344 IVHEPKDQGLCGSCWAFASVGNIESVF----AKKNKNILS-----FSEQEVVDCSKDNFG 394

Query: 171 CQGGWPLDAWKWIQSKGVCTGTDIKTKGG----CKPYPYSSGGATPRSPCKSACTANWKT 226
           C GG P  ++ ++    +C G + K K      C  Y            CK         
Sbjct: 395 CDGGHPFYSFLYVLQNELCLGDEYKYKAKDDMFCLNY-----------RCKRKV------ 437

Query: 227 PYPKDKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANAR 286
                   +  + G       + A+ NE+   GP+     V NDF++Y  GVY  T +  
Sbjct: 438 --------SLSSIGAVKENQLILAL-NEV---GPLSVNVGVNNDFVAYSEGVYNGTCSEE 485

Query: 287 KVGGHAVRIIGWG------------TQTCNGKS---------MPFWLIANSWSTGWGEKG 325
               H+V ++G+G             QT N K          + +W+I NSWS  WGE G
Sbjct: 486 --LNHSVLLVGYGQVEKTKLNYNNKIQTYNTKENSNQPDDNIIYYWIIKNSWSKKWGENG 543

Query: 326 LVKIRSGVN 334
            +++    N
Sbjct: 544 FMRLSRNKN 552
>M.Javanica_Scaff13493g067478 on ABC02174  Falstatin  (Others)  [Plasmodium falciparum]
          Length = 492

 Score = 75.5 bits (184), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 93/231 (40%), Gaps = 51/231 (22%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDGCQGG 174
           ++DQ  CGSCWA S+  +   +Y I +          A   FS  +++ CS+  +GC GG
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIRKK---------ALFLFSEQELVDCSVKNNGCYGG 334

Query: 175 WPLDAW-KWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRS----PCKSACTANWKTPYP 229
           +  +A+   I   G+C+  D         YPY S    P +     C    T       P
Sbjct: 335 YITNAFDDMIDLGGLCSQDD---------YPYVSN--LPETCNLKRCNERYTIKSYVSIP 383

Query: 230 KDKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANARKVG 289
            DK F    + L                 GP+       +DF  YR G Y     A    
Sbjct: 384 DDK-FKEALRYL-----------------GPISISIAASDDFAFYRGGFYDGECGA--AP 423

Query: 290 GHAVRIIGWGTQ------TCNGKSMPFWLIANSWSTGWGEKGLVKIRSGVN 334
            HAV ++G+G +      T   +   +++I NSW + WGE G + + +  N
Sbjct: 424 NHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDEN 474
>M.Javanica_Scaff13493g067478 on XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 492

 Score = 75.5 bits (184), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 93/231 (40%), Gaps = 51/231 (22%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDGCQGG 174
           ++DQ  CGSCWA S+  +   +Y I +          A   FS  +++ CS+  +GC GG
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIRKK---------ALFLFSEQELVDCSVKNNGCYGG 334

Query: 175 WPLDAW-KWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRS----PCKSACTANWKTPYP 229
           +  +A+   I   G+C+  D         YPY S    P +     C    T       P
Sbjct: 335 YITNAFDDMIDLGGLCSQDD---------YPYVSN--LPETCNLKRCNERYTIKSYVSIP 383

Query: 230 KDKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANARKVG 289
            DK F    + L                 GP+       +DF  YR G Y     A    
Sbjct: 384 DDK-FKEALRYL-----------------GPISISIAASDDFAFYRGGFYDGECGA--AP 423

Query: 290 GHAVRIIGWGTQ------TCNGKSMPFWLIANSWSTGWGEKGLVKIRSGVN 334
            HAV ++G+G +      T   +   +++I NSW + WGE G + + +  N
Sbjct: 424 NHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDEN 474
>M.Javanica_Scaff13493g067478 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 75.5 bits (184), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 43/224 (19%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDGCQGG 174
           ++DQ  CGSCWA S+  +   +Y I + K             S  +++ CS    GC GG
Sbjct: 276 VKDQKNCGSCWAFSSIGSVESQYAIRKNKL---------ITLSEQELVDCSFKNYGCNGG 326

Query: 175 WPLDAWK-WIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYPKDKH 233
              +A++  I+  G+CT  D         YPY S    P       CT  +         
Sbjct: 327 LINNAFEDMIELGGICTDDD---------YPYVSDA--PNLCNIDRCTEKY--------- 366

Query: 234 FATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANARKVGGHAV 293
              G K     +     +K  +   GP+     V +DF  Y+ G++           HAV
Sbjct: 367 ---GIKNYL--SVPDNKLKEALRFLGPISISVAVSDDFAFYKEGIF--DGECGDQLNHAV 419

Query: 294 RIIGWGTQ------TCNGKSMPFWLIANSWSTGWGEKGLVKIRS 331
            ++G+G +      T  G+   +++I NSW   WGE+G + I +
Sbjct: 420 MLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIET 463
>M.Javanica_Scaff13493g067478 on XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 482

 Score = 75.1 bits (183), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 43/224 (19%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDGCQGG 174
           ++DQ  CGSCWA S+  +   +Y I + K             S  +++ CS    GC GG
Sbjct: 274 VKDQKNCGSCWAFSSIGSVESQYAIRKNKL---------ITLSEQELVDCSFKNYGCNGG 324

Query: 175 WPLDAWK-WIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYPKDKH 233
              +A++  I+  G+CT  D         YPY S    P       CT  +         
Sbjct: 325 LINNAFEDMIELGGICTDDD---------YPYVSDA--PNLCNIDRCTEKY--------- 364

Query: 234 FATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANARKVGGHAV 293
              G K     +     +K  +   GP+     V +DF  Y+ G++           HAV
Sbjct: 365 ---GIKNYL--SVPDNKLKEALRFLGPISISIAVSDDFPFYKEGIF--DGECGDELNHAV 417

Query: 294 RIIGWGTQ------TCNGKSMPFWLIANSWSTGWGEKGLVKIRS 331
            ++G+G +      T  G+   +++I NSW   WGE+G + I +
Sbjct: 418 MLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIET 461
>M.Javanica_Scaff13493g067478 on XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]
          Length = 318

 Score = 69.3 bits (168), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 35/236 (14%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMS--RDGCQ 172
           I+DQ  CGSC++ ++ +    R  +A +KK      D   Q     ++ CS+S    GC 
Sbjct: 110 IRDQASCGSCYSFASVAAIEGRLLVAGSKKFTVDDLDLSEQ----QLVDCSVSVGNKGCN 165

Query: 173 GGWPLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYPKDK 232
           GG  L ++++++  G+    D         YPY +   T        CT + K    K  
Sbjct: 166 GGSLLLSFRYVKLNGIMQEKD---------YPYVAAEET--------CTYDKKKVAVK-- 206

Query: 233 HFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANARKVGGHA 292
              TG K ++  +                +    V   F  Y+SG+Y     +     H 
Sbjct: 207 --ITGQKLVRPGSEKALMRAAAEGPVAAAIDASGV--KFQLYKSGIYNSKECSSTQLNHG 262

Query: 293 VRIIGWGTQTCNGKSMPFWLIANSWSTGWGEKGLVKI-RSGVNEVGIEKSGIAFGI 347
           V ++G+GTQ  NG    +W++ NSW T WG++G V + R+  N+ GI  SG A+ +
Sbjct: 263 VAVVGYGTQ--NG--TEYWIVRNSWGTIWGDQGYVLMSRNKNNQCGI-ASGAAYPV 313
>M.Javanica_Scaff13493g067478 on AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 206

 Score = 63.2 bits (152), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 83/208 (39%), Gaps = 34/208 (16%)

Query: 111 IIGHIQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDG 170
           ++  IQDQGQCGSCWA S       +Y I   +           + S  +++ C  + DG
Sbjct: 32  VVNPIQDQGQCGSCWAFSAIQAQESQYAITSGEL---------QKLSEQNLVDCVTTCDG 82

Query: 171 CQGGWPLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYPK 230
           C+GG   +A+ ++          IK + G     +      P +     C  +       
Sbjct: 83  CEGGLMTNAYDYV----------IKYQDG----KFMLENDYPYTAYYYDCLFDTDKAVSN 128

Query: 231 DKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDV-YNDFMSYRSGVYFKTANARKVG 289
              +    +G + + AT      +I TNGP     D  +  F  Y  G+Y   + +    
Sbjct: 129 IVSYINVVEGDENDLAT------KISTNGPAAVAIDASHYSFQLYSQGIYNVPSRSSYGL 182

Query: 290 GHAVRIIGWGTQTCNGKSMPFWLIANSW 317
            H V  +G+G +     S  +W++ NSW
Sbjct: 183 DHGVGCVGYGAE----GSTKYWIVKNSW 206
>M.Javanica_Scaff13493g067478 on XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 54.7 bits (130), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 46/232 (19%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGS-QFSALDVLSCSMSRDGCQG 173
           I+DQ QCGSC+   + +    R  I +       G DA +   S   ++ C+  RD    
Sbjct: 109 IRDQAQCGSCYTFGSLAALEGRLLIEK-------GGDANTLDLSEEHMVQCT--RDNGNN 159

Query: 174 GWPLD----AWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYP 229
           G         + +I   GV   +D         YPY+   +T ++  KS       T  P
Sbjct: 160 GCNGGLGSNVYDYIIEHGVAKESD---------YPYTGSDSTCKTNVKSFAKITGYTKVP 210

Query: 230 KDKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYN-DFMSYRSGVYFKTA--NAR 286
           ++            N A ++A     ++ G V    D  +  F  Y+SG Y  T   N  
Sbjct: 211 RN------------NEAELKAA----LSQGLVDVSIDASSAKFQLYKSGAYTDTKCKNNY 254

Query: 287 KVGGHAVRIIGWGTQTCNGKSMPFWLIANSWSTGWGEKGLVKIRSGVNEVGI 338
               H V  +G+G    +GK    W++ NSW TGWG+KG + +    N  G+
Sbjct: 255 FALNHEVCAVGYGV--VDGKEC--WIVRNSWGTGWGDKGYINMVIEGNTCGV 302
>M.Javanica_Scaff13493g067478 on XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 53.9 bits (128), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 40/220 (18%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMS--RDGCQ 172
           I+DQG CGSC+   + +    R  I      +K G       S   ++ C+     +GC 
Sbjct: 109 IRDQGNCGSCYTFGSIAALEGRLLI------EKGGDSETLDLSEEHMVQCTREDGNNGCN 162

Query: 173 GGWPLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYPKDK 232
           GG   + + +I   G+   +D         YPY+   +T RS  K+         + K K
Sbjct: 163 GGLGSNVYNYIMENGIAKESD---------YPYTGSDSTCRSDVKA---------FAKIK 204

Query: 233 HFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYN-DFMSYRSGVYF--KTANARKVG 289
            +   A+    N   ++A     ++ G V    D  +  F  Y+SG Y   +  N     
Sbjct: 205 SYNRVARN---NEVELKAA----ISQGLVDVSIDASSVQFQLYKSGAYTDKQCKNNYFAL 257

Query: 290 GHAVRIIGWGTQTCNGKSMPFWLIANSWSTGWGEKGLVKI 329
            H V  +G+G    +GK    W++ NSW TGWGEKG + +
Sbjct: 258 NHEVCAVGYGV--VDGKEC--WIVRNSWGTGWGEKGYINM 293
>M.Javanica_Scaff13493g067478 on CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 52.8 bits (125), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 98/256 (38%), Gaps = 64/256 (25%)

Query: 33  QKIVDDINGLAKGVWTAEVNTITRLPLIEQKKLCGT-IIPEENRNHTQAEPPKVEGTVKG 91
           +++V + N   KG +   +N +  L   E + L G   + +++ N  + + P  +     
Sbjct: 48  KRLVQEHNAANKG-FKLGLNKLAHLTQSEYRSLLGAKRLGQKSGNFFKCDAPANDAV--- 103

Query: 92  SCSTKIEFDARTKWSGCSAIIGHIQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTD 151
                   D R K      I+  I+DQGQCGSCWA S       RY      +  K   D
Sbjct: 104 --------DWRDK-----GIVNKIKDQGQCGSCWAFSAIQASESRYA-----QANKQLLD 145

Query: 152 AGSQFSALDVLSCSMSRDGCQGGWPLDAWKWIQSKGVCTGTDIKTKGG----CKPYPYSS 207
              Q    +++ C  S  GC GGWP  A  ++          +K + G       YPY++
Sbjct: 146 LAEQ----NIVDCVTSCYGCNGGWPSKAIDYV----------VKHQAGKFMLTADYPYTA 191

Query: 208 GGATPRSPCKSACTANWKTPYPKDKHFATGAKGLQGNTATVQAIKNEI---MTNGPVVAC 264
              T    C               K  A+ + GL      V+  + E+    + G V  C
Sbjct: 192 RDGT----C---------------KFHASKSVGLTKGYDEVKDTEAELAKAASKGVVSVC 232

Query: 265 FDV-YNDFMSYRSGVY 279
            D  +  F  Y SG+Y
Sbjct: 233 IDASHYSFQLYTSGIY 248
>M.Javanica_Scaff13493g067478 on CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 52.0 bits (123), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 106/273 (38%), Gaps = 53/273 (19%)

Query: 33  QKIVDDINGLAKGVWTAEVNTITRLPLIEQKKLCGTIIPEENRNHTQAEPPKVEGTVKGS 92
           +++V + N    G +T  +N +  L   E   L G  + +  R             VK +
Sbjct: 25  KRLVQEHNRANLG-FTVALNKLAHLTPAEYNSLLGFRMNKAERK-----------AVKSN 72

Query: 93  CSTKIEFDARTKWSGCSAIIGHIQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDA 152
                + D R K       +  I+DQGQCGSCWA S       +Y I+      KT    
Sbjct: 73  AIANADCDWRKK-----GAVNPIKDQGQCGSCWAFSAIQAQESQYYISF-----KTLQSL 122

Query: 153 GSQFSALDVLSCSMSRDGCQGGWPLDAWKWI---QSKGVCTGTDIKTKGGCKPYPYSSGG 209
             Q    +++ C  +  GC GG    A+ ++   QS    T  D         YPY    
Sbjct: 123 SEQ----NLVDCVTTCYGCNGGLMDAAYDYVVKHQSGKFMTEAD---------YPY---- 165

Query: 210 ATPRSPCKSACTANWKTPYPKDKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYN 269
            T R     +C  N      + K +   A+G + + AT      ++ T GP     D   
Sbjct: 166 -TARD---GSCKFNAAKGTSQIKSYVNVAEGDEKDLAT------KVSTLGPAAIAIDASA 215

Query: 270 -DFMSYRSGVYFKTANARKVGGHAVRIIGWGTQ 301
             F  Y SG+Y ++A +     H V  +G+GT+
Sbjct: 216 WSFQLYSSGIYDESACSSYNLDHGVGCVGYGTE 248
>M.Javanica_Scaff13493g067478 on AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 45.4 bits (106), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 97/255 (38%), Gaps = 53/255 (20%)

Query: 33  QKIVDDINGLAKGVWTAEVNTITRLPLIEQKKLCGTIIPEENRNHTQAEPPKVEGTVKGS 92
           +++V + N    G +T  +N +  L   E   L G  + +  R             VK +
Sbjct: 38  KRLVQEHNRANLG-FTVALNKLAHLTPAEYNSLLGFRMNKAERK-----------AVKSN 85

Query: 93  CSTKIEFDARTKWSGCSAIIGHIQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDA 152
                + D R K       +  I+DQGQCGSCWA S       +Y I+      KT    
Sbjct: 86  AIANADCDWRKK-----GAVNPIKDQGQCGSCWAFSAIQAQESQYYISF-----KTLQSL 135

Query: 153 GSQFSALDVLSCSMSRDGCQGGWPLDAWKWI---QSKGVCTGTDIKTKGGCKPYPYSSGG 209
             Q    +++ C  +  GC GG    A+ ++   QS    T  D         YPY++  
Sbjct: 136 SEQ----NLVDCVTTCYGCNGGLMDAAYDYVVKHQSGKFMTEAD---------YPYTARD 182

Query: 210 ATPRSPCKSACTANWKTPYPKDKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYN 269
            +        C  N      + K +   A+G + + AT      ++ T GP     D   
Sbjct: 183 GS--------CKFNAAKGTSQIKSYVNVAEGDEKDLAT------KVSTLGPAAIAIDASA 228

Query: 270 -DFMSYRSGVYFKTA 283
             F  Y SG+Y ++A
Sbjct: 229 WSFQLYSSGIYDESA 243
>M.Javanica_Scaff13493g067478 on CAA38278  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]
          Length = 70

 Score = 38.5 bits (88), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 13/29 (44%), Positives = 21/29 (72%)

Query: 307 SMPFWLIANSWSTGWGEKGLVKIRSGVNE 335
           ++P+W+I NSW+  WGE G ++I  G N+
Sbjct: 2   AVPYWIIKNSWTAQWGEDGYIRIAKGSNQ 30
>M.Javanica_Scaff13493g067478 on EAN83733  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]
          Length = 70

 Score = 38.1 bits (87), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 25/35 (71%)

Query: 307 SMPFWLIANSWSTGWGEKGLVKIRSGVNEVGIEKS 341
           ++P W+I NSW+T WGE G ++I  G N+  ++++
Sbjct: 10  TVPHWIIKNSWTTQWGEDGYIRIAKGSNQCLVKEA 44
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16059g073757
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1335g014852
         (121 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14220g069335
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15736g073041
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1609g017021
         (1086 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15965g073538
         (374 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13745g068158
         (169 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15798g073188
         (188 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14079g068995
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14715g070571
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14895g071035
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15903g073405
         (318 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14557g070179
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1541g016503
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff136g002436
         (262 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff141g002507
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1398g015372
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14914g071076
         (222 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14311g069575
         (223 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14101g069049
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15592g072699
         (170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14870g070970
         (87 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14602g070293
         (293 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13783g068267
         (198 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14450g069925
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14950g071169
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1496g016145
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14433g069887
         (181 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff143g002536
         (266 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1405g015418
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15476g072424
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14874g070985
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1295g014526
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13841g068412
         (606 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15371g072175
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14461g069956
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14443g069905
         (319 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13955g068684
         (572 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13g000348
         (781 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13160g066629
         (340 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15605g072734
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15577g072662
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13376g067188
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff142g002534
         (165 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14343g069662
         (223 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1431g015636
         (185 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14024g068856
         (286 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1385g015253
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13459g067389
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14101g069050
         (369 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15978g073575
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15034g071385
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15945g073490
         (185 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15193g071760
         (221 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16181g073998
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13729g068120
         (264 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1425g015590
         (161 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13407g067264
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13562g067655
         (382 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14181g069251
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15352g072133
         (294 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1324g014767
         (209 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1445g015769
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff155g002728
         (245 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13489g067473
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14938g071139
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14660g070428
         (432 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15924g073450
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15081g071498
         (188 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15423g072287
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15503g072503
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1432g015645
         (267 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14390g069777
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14023g068851
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15260g071924
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1599g016950
         (249 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15064g071456
         (166 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14978g071241
         (162 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1598g016940
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15568g072648
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13975g068728
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13377g067190
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1496g016143
         (212 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1353g014978
         (478 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13573g067678
         (249 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13596g067756
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13182g066705
         (186 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13705g068061
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15374g072180
         (438 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14583g070244
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13322g067046
         (121 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13498g067487
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13084g066431
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15613g072751
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14407g069820
         (747 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1589g016869
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13g000332
         (211 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15668g072882
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1462g015889
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13992g068768
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15211g071799
         (394 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13154g066611
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13258g066892
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13520g067550
         (190 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14803g070825
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1408g015449
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13247g066868
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15023g071349
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1538g016474
         (999 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1576g016778
         (313 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15529g072568
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1390g015304
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16018g073670
         (260 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1295g014527
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15583g072678
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14107g069061
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15935g073472
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13956g068686
         (361 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12956g066123
         (128 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13g000360
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15245g071884
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15447g072343
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13597g067757
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15239g071866
         (187 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1463g015903
         (481 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14455g069938
         (1207 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14091g069021
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1490g016112
         (417 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13273g066926
         (580 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13168g066655
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13632g067858
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1337g014863
         (129 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15183g071736
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1422g015559
         (237 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13010g066256
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14255g069434
         (163 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13677g067984
         (222 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13390g067227
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14052g068930
         (172 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13000g066235
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15635g072797
         (173 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1541g016498
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14819g070863
         (254 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14452g069931
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14227g069355
         (192 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15112g071565
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1339g014887
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15432g072308
         (393 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff136g002437
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14454g069935
         (328 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15736g073042
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15883g073370
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15797g073186
         (382 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1521g016326
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15113g071568
         (295 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1437g015693
         (320 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1583g016827
         (499 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13973g068722
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15339g072103
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1606g017008
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1301g014588
         (326 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14051g068927
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14587g070256
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1501g016189
         (509 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1415g015513
         (157 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15423g072286
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15495g072475
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15093g071526
         (172 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff140g002495
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15079g071493
         (551 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14869g070968
         (616 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff130g002361
         (552 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15522g072554
         (238 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13252g066882
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16045g073732
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14970g071216
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1469g015943
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1455g015846
         (228 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15614g072753
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14641g070385
         (155 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14356g069694
         (121 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15020g071334
         (59 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1410g015466
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13153g066607
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16084g073815
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1304g014611
         (305 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1307g014639
         (650 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff152g002662
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14263g069458
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15785g073156
         (257 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13600g067768
         (286 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14687g070503
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15574g072658
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13094g066460
         (166 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13176g066683
         (442 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15213g071804
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff153g002692
         (509 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14887g071015
         (318 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13162g066635
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1309g014664
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15710g072984
         (196 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1422g015556
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14300g069550
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15727g073023
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13356g067138
         (393 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13467g067412
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13861g068460
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1300g014575
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15698g072958
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15874g073354
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14570g070211
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1399g015375
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13973g068721
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1555g016619
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12990g066205
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15051g071427
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13070g066394
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1443g015749
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1426g015594
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13213g066794
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14820g070866
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14552g070165
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13122g066530
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1419g015543
         (445 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14102g069052
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13306g067011
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14898g071041
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1602g016975
         (759 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1459g015876
         (383 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13652g067913
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15142g071632
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14097g069039
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14697g070533
         (435 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13673g067970
         (233 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16154g073945
         (391 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13970g068713
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14613g070318
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14873g070981
         (237 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13123g066535
         (257 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14337g069645
         (128 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1577g016785
         (166 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14997g071285
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14016g068835
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15925g073456
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14652g070405
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15259g071920
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16163g073960
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12995g066220
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12928g066051
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14190g069270
         (320 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1564g016678
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15160g071673
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1339g014883
         (426 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14576g070231
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14760g070704
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff139g002483
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15363g072154
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14447g069919
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14013g068821
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff144g002557
         (194 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15697g072955
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15310g072031
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16175g073987
         (222 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1309g014663
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15493g072470
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1530g016412
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1316g014704
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13849g068434
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14947g071158
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1308g014645
         (244 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15987g073591
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15942g073486
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1440g015716
         (554 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15911g073424
         (229 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13869g068484
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13831g068389
         (256 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14321g069606
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1339g014885
         (343 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13845g068422
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1489g016108
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13493g067479
         (235 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]           85   2e-20
P92132  CP2  (Cysteine protease)  [Giardia duodenalis]                 59   2e-11
ABC02174  Falstatin  (Others)  [Plasmodium falciparum]                 52   7e-09
XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium falc...    52   7e-09
AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    49   6e-08
XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium falc...    49   6e-08
CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]            46   4e-07
PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]    46   9e-07
AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]           44   2e-06
XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]           41   3e-05
AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]            39   1e-04
>M.Javanica_Scaff13493g067479 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score = 84.7 bits (208), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 83/176 (47%), Gaps = 22/176 (12%)

Query: 33  QKIVDDINHLAGGVWTAEVNELTK-LPLIEQKKLCGTIIPEENKNHTQAEPPKVEGTVKG 91
           +  VD +N L  G+W A+ + + + + L E K+L G I   +  N+    P +     + 
Sbjct: 34  KAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVI---KKNNNASILPKRRFTEEEA 90

Query: 92  SCSTKIEFDARTKWSGCSAIIGRIQDQRPCGSCWAVSTASVYTDRYCITRLKKGKTTSAT 151
                  FD+   W  C  I  +I DQ  CGSCWAV+ AS  +DR+C         T   
Sbjct: 91  RAPLPSSFDSAEAWPNCPTI-PQIADQSACGSCWAVAAASAMSDRFC---------TMGG 140

Query: 152 DAGSQFSALDILT-CSISGDGCKGGWPPSAWNWIKSKGVCTGTDYKTESGCKPYPY 206
                 SA D+L  CS  GDGC GG P  AW +  S G+   +DY     C+PYP+
Sbjct: 141 VQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLV--SDY-----CQPYPF 189
>M.Javanica_Scaff13493g067479 on P92132  CP2  (Cysteine protease)  [Giardia duodenalis]
          Length = 255

 Score = 58.5 bits (140), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 17/158 (10%)

Query: 36  VDDINHL--AGGVWTAEVNELTKLPLIEQKKLCGTIIPEENKNHTQAEPPKVEGTVKGSC 93
           V ++NH+      W A + +  +   + + ++   ++P     + +   P+  GT     
Sbjct: 18  VSELNHIKSLNPRWKAGIPK--RFEGLTKDEISSLLMPVSFLKNAKGAAPR--GTFTDKD 73

Query: 94  STKIEFDARTKWSGCSAIIGRIQDQRPCGSCWAVSTASVYTDRYCITRLKKGKTTSATDA 153
                FD R ++  C   I  + DQ  CGSCWA S+ + + DR C+  L K         
Sbjct: 74  DVPESFDFREEYPHC---IPEVVDQGGCGSCWAFSSVATFGDRRCVAGLDKKPV------ 124

Query: 154 GSQFSALDILTCSISGDGCKGGWPPSAWNWIKSKGVCT 191
             ++S   +++C      C GGW P+ W ++   G  T
Sbjct: 125 --KYSPQYVVSCDHGDMACNGGWLPNVWKFLTKTGTTT 160
>M.Javanica_Scaff13493g067479 on ABC02174  Falstatin  (Others)  [Plasmodium falciparum]
          Length = 492

 Score = 52.0 bits (123), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 18/120 (15%)

Query: 115 IQDQRPCGSCWAVSTASVYTDRYCITRLKKGKTTSATDAGSQFSALDILTCSISGDGCKG 174
           ++DQ  CGSCWA S+      +Y I +           A   FS  +++ CS+  +GC G
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIRK----------KALFLFSEQELVDCSVKNNGCYG 333

Query: 175 GWPPSAW-NWIKSKGVCTGTDYKTESGCKPYPYTPSKSATRVQCKSSCTANWRTTYPGDK 233
           G+  +A+ + I   G+C+  DY       PY     ++    +C    T     + P DK
Sbjct: 334 GYITNAFDDMIDLGGLCSQDDY-------PYVSNLPETCNLKRCNERYTIKSYVSIPDDK 386
>M.Javanica_Scaff13493g067479 on XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 492

 Score = 52.0 bits (123), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 18/120 (15%)

Query: 115 IQDQRPCGSCWAVSTASVYTDRYCITRLKKGKTTSATDAGSQFSALDILTCSISGDGCKG 174
           ++DQ  CGSCWA S+      +Y I +           A   FS  +++ CS+  +GC G
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIRK----------KALFLFSEQELVDCSVKNNGCYG 333

Query: 175 GWPPSAW-NWIKSKGVCTGTDYKTESGCKPYPYTPSKSATRVQCKSSCTANWRTTYPGDK 233
           G+  +A+ + I   G+C+  DY       PY     ++    +C    T     + P DK
Sbjct: 334 GYITNAFDDMIDLGGLCSQDDY-------PYVSNLPETCNLKRCNERYTIKSYVSIPDDK 386
>M.Javanica_Scaff13493g067479 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 49.3 bits (116), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 11/82 (13%)

Query: 115 IQDQRPCGSCWAVSTASVYTDRYCITRLKKGKTTSATDAGSQFSALDILTCSISGDGCKG 174
           ++DQ+ CGSCWA S+      +Y I   +K K  + ++        +++ CS    GC G
Sbjct: 276 VKDQKNCGSCWAFSSIGSVESQYAI---RKNKLITLSEQ-------ELVDCSFKNYGCNG 325

Query: 175 GWPPSAW-NWIKSKGVCTGTDY 195
           G   +A+ + I+  G+CT  DY
Sbjct: 326 GLINNAFEDMIELGGICTDDDY 347
>M.Javanica_Scaff13493g067479 on XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 482

 Score = 49.3 bits (116), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 11/82 (13%)

Query: 115 IQDQRPCGSCWAVSTASVYTDRYCITRLKKGKTTSATDAGSQFSALDILTCSISGDGCKG 174
           ++DQ+ CGSCWA S+      +Y I   +K K  + ++        +++ CS    GC G
Sbjct: 274 VKDQKNCGSCWAFSSIGSVESQYAI---RKNKLITLSEQ-------ELVDCSFKNYGCNG 323

Query: 175 GWPPSAW-NWIKSKGVCTGTDY 195
           G   +A+ + I+  G+CT  DY
Sbjct: 324 GLINNAFEDMIELGGICTDDDY 345
>M.Javanica_Scaff13493g067479 on CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 46.2 bits (108), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 10/74 (13%)

Query: 111 IIGRIQDQRPCGSCWAVSTASVYTDRYCITRLKKGKTTSATDAGSQFSALDILTCSISGD 170
           I+ +I+DQ  CGSCWA S       RY              D   Q    +I+ C  S  
Sbjct: 110 IVNKIKDQGQCGSCWAFSAIQASESRYAQA------NKQLLDLAEQ----NIVDCVTSCY 159

Query: 171 GCKGGWPPSAWNWI 184
           GC GGWP  A +++
Sbjct: 160 GCNGGWPSKAIDYV 173
>M.Javanica_Scaff13493g067479 on PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]
          Length = 569

 Score = 45.8 bits (107), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 10/86 (11%)

Query: 111 IIGRIQDQRPCGSCWAVSTASVYTDRYCITRLKKGKTTSATDAGSQFSALDILTCSISGD 170
           I+   +DQ  CGSCWA ++       +     KK K   +      FS  +++ CS    
Sbjct: 344 IVHEPKDQGLCGSCWAFASVGNIESVFA----KKNKNILS------FSEQEVVDCSKDNF 393

Query: 171 GCKGGWPPSAWNWIKSKGVCTGTDYK 196
           GC GG P  ++ ++    +C G +YK
Sbjct: 394 GCDGGHPFYSFLYVLQNELCLGDEYK 419
>M.Javanica_Scaff13493g067479 on AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 206

 Score = 43.5 bits (101), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 10/74 (13%)

Query: 111 IIGRIQDQRPCGSCWAVSTASVYTDRYCITRLKKGKTTSATDAGSQFSALDILTCSISGD 170
           ++  IQDQ  CGSCWA S       +Y IT  +  K           S  +++ C  + D
Sbjct: 32  VVNPIQDQGQCGSCWAFSAIQAQESQYAITSGELQK----------LSEQNLVDCVTTCD 81

Query: 171 GCKGGWPPSAWNWI 184
           GC+GG   +A++++
Sbjct: 82  GCEGGLMTNAYDYV 95
>M.Javanica_Scaff13493g067479 on XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]
          Length = 318

 Score = 40.8 bits (94), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 7/103 (6%)

Query: 115 IQDQRPCGSCWAVSTASVYTDRYCITRLKKGKTTSATDAGSQFSALDILTCSIS--GDGC 172
           I+DQ  CGSC++ ++ +    R  +   KK  T    D   Q     ++ CS+S    GC
Sbjct: 110 IRDQASCGSCYSFASVAAIEGRLLVAGSKK-FTVDDLDLSEQ----QLVDCSVSVGNKGC 164

Query: 173 KGGWPPSAWNWIKSKGVCTGTDYKTESGCKPYPYTPSKSATRV 215
            GG    ++ ++K  G+    DY   +  +   Y   K A ++
Sbjct: 165 NGGSLLLSFRYVKLNGIMQEKDYPYVAAEETCTYDKKKVAVKI 207
>M.Javanica_Scaff13493g067479 on AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 38.9 bits (89), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 72/176 (40%), Gaps = 33/176 (18%)

Query: 33  QKIVDDINHLAGGVWTAEVNELTKLPLIEQKKLCGTIIPEENKNHTQAEPPKVEGTVKGS 92
           +++V + N    G +T  +N+L  L   E   L G  +   NK   +A        VK +
Sbjct: 38  KRLVQEHNRANLG-FTVALNKLAHLTPAEYNSLLGFRM---NKAERKA--------VKSN 85

Query: 93  CSTKIEFDARTKWSGCSAIIGRIQDQRPCGSCWAVSTASVYTDRYCITRLKKGKTTSATD 152
                + D R K       +  I+DQ  CGSCWA S       +Y I+     KT  +  
Sbjct: 86  AIANADCDWRKK-----GAVNPIKDQGQCGSCWAFSAIQAQESQYYISF----KTLQS-- 134

Query: 153 AGSQFSALDILTCSISGDGCKGGWPPSAWNWIKSKGVCTGTDYKTESGCKPYPYTP 208
                S  +++ C  +  GC GG   +A++++          + TE+    YPYT 
Sbjct: 135 ----LSEQNLVDCVTTCYGCNGGLMDAAYDYVVKH---QSGKFMTEA---DYPYTA 180
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14070g068974
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff137g002447
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14950g071167
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13177g066689
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15074g071479
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15150g071649
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13890g068527
         (131 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1592g016895
         (926 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13460g067391
         (294 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16034g073699
         (388 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13787g068278
         (318 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14367g069719
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15g000390
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14027g068865
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12934g066066
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15791g073169
         (583 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14705g070549
         (170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1590g016878
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16058g073754
         (309 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16092g073831
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14000g068790
         (120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13509g067524
         (330 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13865g068472
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14g000367
         (261 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13745g068157
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff136g002435
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14381g069754
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16036g073706
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15531g072571
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13590g067731
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1408g015456
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15304g072017
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13434g067333
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15596g072712
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1563g016671
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15493g072469
         (228 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13203g066764
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15244g071882
         (242 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13602g067771
         (186 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14399g069799
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14716g070574
         (128 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15052g071428
         (352 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15317g072045
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15605g072731
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1396g015362
         (422 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13845g068423
         (278 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13935g068644
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12967g066152
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14397g069792
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16059g073760
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15639g072805
         (561 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1555g016621
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14684g070492
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15585g072681
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13869g068485
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13411g067270
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14229g069361
         (152 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16092g073830
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16082g073808
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1291g014494
         (286 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1591g016886
         (168 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13470g067422
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15383g072198
         (327 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1577g016791
         (340 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15363g072155
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13204g066768
         (467 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348250  Plasmepsin II  (Proteases)  [Plasmodium falciparum]     173   4e-50
XP_001348249  Plasmepsin I  (Proteases)  [Plasmodium falciparum]      166   3e-47
AAW71459  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         157   7e-44
AAW71463  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         157   7e-44
AAW71460  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         156   1e-43
AAW71461  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         156   1e-43
AAW71462  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         156   1e-43
AAW71454  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   124   3e-32
AAW71455  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   124   3e-32
AAW71456  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   124   3e-32
AAW71457  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   124   3e-32
AAW71458  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   124   3e-32
CAC20154  Eimepsin  (Protease)  [Eimeria tenella]                      89   5e-21
AAS90844  Toxomepsin 2  (Protease)  [Toxoplasma gondii]                86   4e-20
>M.Javanica_Scaff13204g066768 on XP_001348250  Plasmepsin II  (Proteases)  [Plasmodium falciparum]
          Length = 453

 Score =  173 bits (439), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 167/333 (50%), Gaps = 17/333 (5%)

Query: 95  LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHHXXXXXXXXX 154
           L ++ +  +YG   +G   Q F+ I DTGS+NLWVPS KC      CL  H         
Sbjct: 132 LVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT--TAGCLTKHLYDSSKSRT 189

Query: 155 XXXXGRKMQIQYGTGSMKGFVSKDTVCIAKICVAGQEFAEAVSEPGL--TFVAAKFDGIL 212
               G K+++ Y +G++ GF SKD V +  + +   +F E +   G   T+ A+ FDGIL
Sbjct: 190 YEKDGTKVEMNYVSGTVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGIL 248

Query: 213 GMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGGTDKRRYVEPL 272
           G+ + ++S+  V P+  ++ +Q K+   +F+F+L    + K  G +TIGG ++R Y  PL
Sbjct: 249 GLGWKDLSIGSVDPIVVELKNQNKIENALFTFYL--PVHDKHTGFLTIGGIEERFYEGPL 306

Query: 273 NYTPVTRKAYWQFKMEG-VHNSKGEKIACQNGCEAIADTGTSLIAGPKAQIEEIQHYIGA 331
            Y  +    YWQ  ++  V N   EK  C      I D+GTS I  P   + ++   +  
Sbjct: 307 TYEKLNHDLYWQITLDAHVGNIMLEKANC------IVDSGTSAITVPTDFLNKMLQNLDV 360

Query: 332 IPLMHGEYMVSCERVPHLPDIALLIGGHSYVLKGSDYILNVTAMGKSICLSGFMGIDLPP 391
           I +    + V+      LP          Y L+   Y+ ++  +G  +C+   +G+D P 
Sbjct: 361 IKVPFLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFPV 420

Query: 392 KVGELWILGDVFIGRYYTVFDVGQQRIGLAQAR 424
                +ILGD F+ +Y+TVFD   Q +G+A A+
Sbjct: 421 PT---FILGDPFMRKYFTVFDYDNQSVGIALAK 450
>M.Javanica_Scaff13204g066768 on XP_001348249  Plasmepsin I  (Proteases)  [Plasmodium falciparum]
          Length = 452

 Score =  166 bits (420), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 165/338 (48%), Gaps = 23/338 (6%)

Query: 95  LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHHXXXXXXXXX 154
           L +  +  YYG   IG   Q F+ IFDTGS+NLWVPS +C    I C   +         
Sbjct: 131 LNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN--TIGCKTKNLYDSNKSKT 188

Query: 155 XXXXGRKMQIQYGTGSMKGFVSKDTVCIAKICVAGQEFAEAVSEPGL--TFVAAKFDGIL 212
               G K+++ Y +G++ GF SKD V IA +     +F E     G    +   +FDGI+
Sbjct: 189 YEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSFP-YKFIEVTDTNGFEPAYTLGQFDGIV 247

Query: 213 GMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGGTDKRRYVEPL 272
           G+ + ++S+  V PV  ++ +Q K+ + VF+F+L  D   K  G +TIGG + R Y   L
Sbjct: 248 GLGWKDLSIGSVDPVVVELKNQNKIEQAVFTFYLPFDDKHK--GYLTIGGIEDRFYEGQL 305

Query: 273 NYTPVTRKAYWQFKMEGVH--NSKGEKIACQNGCEAIADTGTSLIAGPKAQIEEIQHYIG 330
            Y  +    YWQ  ++ +H  N   EK        AI D+GTS I  P   + +    + 
Sbjct: 306 TYEKLNHDLYWQVDLD-LHFGNLTVEK------ATAIVDSGTSSITAPTEFLNKFFEGLD 358

Query: 331 A--IPLMHGEYMVSCERVPHLPDIALLIGGHSYVLKGSDYILNVTAMGKSICLSGFMGID 388
              IP +   Y+ +C   P LP +      + Y L+   Y+  +   G S+C+   + +D
Sbjct: 359 VVKIPFL-PLYITTCNN-PKLPTLEFRSATNVYTLEPEYYLQQIFDFGISLCMVSIIPVD 416

Query: 389 LPPKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARDE 426
           L       +ILGD F+ +Y+TVFD     +G A A+ +
Sbjct: 417 LNKNT---FILGDPFMRKYFTVFDYDNHTVGFALAKKK 451
>M.Javanica_Scaff13204g066768 on AAW71459  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  157 bits (396), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 172/347 (49%), Gaps = 26/347 (7%)

Query: 87  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 145
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 146 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIAKICVAGQEFAEAVSEPGL--TF 203
                        G K++I YG+G+++G+ SKD + +  + +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 204 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGGT 263
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYL--PVHDKHVGYLTIGGI 294

Query: 264 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSKGEKIACQNGCEAIADTGTSLIAGPKAQIE 323
           +   Y  PL Y  +    YWQ  ++ +H  K           A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFGK----YVMQKANAVVDSGTSTITAPTSFLN 349

Query: 324 EIQHYIGAI-----PLMHGEYMVSCERVPHLPDIALLIGGHSYVLKGSDYILNVTAMGKS 378
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFRDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 379 ICLSGFMGIDLPPKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 425
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff13204g066768 on AAW71463  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  157 bits (396), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 172/347 (49%), Gaps = 26/347 (7%)

Query: 87  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 145
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 146 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIAKICVAGQEFAEAVSEPGL--TF 203
                        G K++I YG+G+++G+ SKD + +  + +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 204 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGGT 263
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYL--PVHDKHVGYLTIGGI 294

Query: 264 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSKGEKIACQNGCEAIADTGTSLIAGPKAQIE 323
           +   Y  PL Y  +    YWQ  ++ +H  K           A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFGK----YVMQKANAVVDSGTSTITAPTSFLN 349

Query: 324 EIQHYIGAI-----PLMHGEYMVSCERVPHLPDIALLIGGHSYVLKGSDYILNVTAMGKS 378
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFRDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 379 ICLSGFMGIDLPPKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 425
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff13204g066768 on AAW71460  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  156 bits (394), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 172/347 (49%), Gaps = 26/347 (7%)

Query: 87  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 145
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 146 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIAKICVAGQEFAEAVSEPGL--TF 203
                        G K++I YG+G+++G+ SKD + +  + +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 204 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGGT 263
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYL--PVHDKHVGYLTIGGI 294

Query: 264 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSKGEKIACQNGCEAIADTGTSLIAGPKAQIE 323
           +   Y  PL Y  +    YWQ  ++ +H  K           A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFGK----YVMQKANAVVDSGTSTITAPTSFLN 349

Query: 324 EIQHYIGAI-----PLMHGEYMVSCERVPHLPDIALLIGGHSYVLKGSDYILNVTAMGKS 378
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFTDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 379 ICLSGFMGIDLPPKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 425
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff13204g066768 on AAW71461  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  156 bits (394), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 172/347 (49%), Gaps = 26/347 (7%)

Query: 87  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 145
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 146 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIAKICVAGQEFAEAVSEPGL--TF 203
                        G K++I YG+G+++G+ SKD + +  + +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 204 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGGT 263
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYL--PVHDKHVGYLTIGGI 294

Query: 264 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSKGEKIACQNGCEAIADTGTSLIAGPKAQIE 323
           +   Y  PL Y  +    YWQ  ++ +H  K           A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFGK----YVMQKANAVVDSGTSTITAPTSFLN 349

Query: 324 EIQHYIGAI-----PLMHGEYMVSCERVPHLPDIALLIGGHSYVLKGSDYILNVTAMGKS 378
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFTDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 379 ICLSGFMGIDLPPKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 425
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff13204g066768 on AAW71462  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  156 bits (394), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 172/347 (49%), Gaps = 26/347 (7%)

Query: 87  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 145
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 146 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIAKICVAGQEFAEAVSEPGL--TF 203
                        G K++I YG+G+++G+ SKD + +  + +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 204 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGGT 263
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYL--PVHDKHVGYLTIGGI 294

Query: 264 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSKGEKIACQNGCEAIADTGTSLIAGPKAQIE 323
           +   Y  PL Y  +    YWQ  ++ +H  K           A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFGK----YVMQKANAVVDSGTSTITAPTSFLN 349

Query: 324 EIQHYIGAI-----PLMHGEYMVSCERVPHLPDIALLIGGHSYVLKGSDYILNVTAMGKS 378
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFTDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 379 ICLSGFMGIDLPPKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 425
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff13204g066768 on AAW71454  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  124 bits (312), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 161/347 (46%), Gaps = 26/347 (7%)

Query: 87  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 145
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 146 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIAKICVAGQ--EFAEAVS-EPGLT 202
                           +++    G++ G  SKD V I K+ V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 203 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGG 262
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 263 TDKRRYVEPLNYTPVTRKAYWQFKMEGVH--NSKGEKIACQNGCEAIADTGTSLIAGPKA 320
            ++R +  PLNY  +     WQ  ++ VH  N   +K         I D+ TS+I  P  
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNVSSKK------ANVILDSATSVITVPTE 348

Query: 321 QIEEI--QHYIGAIPLMHGEYMVSCERVPHLPDIALLIGGHSYVLKGSDYILNVTAMGKS 378
              +      +  +P +   Y+ +C     LP +        Y L+   Y+  +  +  +
Sbjct: 349 FFNQFVESASVFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFSA 406

Query: 379 ICLSGFMGIDLPPKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 425
           +C+   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 407 LCMLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff13204g066768 on AAW71455  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  124 bits (312), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 161/347 (46%), Gaps = 26/347 (7%)

Query: 87  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 145
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 146 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIAKICVAGQ--EFAEAVS-EPGLT 202
                           +++    G++ G  SKD V I K+ V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 203 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGG 262
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 263 TDKRRYVEPLNYTPVTRKAYWQFKMEGVH--NSKGEKIACQNGCEAIADTGTSLIAGPKA 320
            ++R +  PLNY  +     WQ  ++ VH  N   +K         I D+ TS+I  P  
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNVSSKK------ANVILDSATSVITVPTE 348

Query: 321 QIEEI--QHYIGAIPLMHGEYMVSCERVPHLPDIALLIGGHSYVLKGSDYILNVTAMGKS 378
              +      +  +P +   Y+ +C     LP +        Y L+   Y+  +  +  +
Sbjct: 349 FFNQFVESASVFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFSA 406

Query: 379 ICLSGFMGIDLPPKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 425
           +C+   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 407 LCMLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff13204g066768 on AAW71456  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  124 bits (312), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 161/347 (46%), Gaps = 26/347 (7%)

Query: 87  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 145
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 146 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIAKICVAGQ--EFAEAVS-EPGLT 202
                           +++    G++ G  SKD V I K+ V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 203 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGG 262
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 263 TDKRRYVEPLNYTPVTRKAYWQFKMEGVH--NSKGEKIACQNGCEAIADTGTSLIAGPKA 320
            ++R +  PLNY  +     WQ  ++ VH  N   +K         I D+ TS+I  P  
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNVSSKK------ANVILDSATSVITVPTE 348

Query: 321 QIEEI--QHYIGAIPLMHGEYMVSCERVPHLPDIALLIGGHSYVLKGSDYILNVTAMGKS 378
              +      +  +P +   Y+ +C     LP +        Y L+   Y+  +  +  +
Sbjct: 349 FFNQFVESASVFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFSA 406

Query: 379 ICLSGFMGIDLPPKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 425
           +C+   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 407 LCMLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff13204g066768 on AAW71457  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  124 bits (312), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 161/347 (46%), Gaps = 26/347 (7%)

Query: 87  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 145
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 146 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIAKICVAGQ--EFAEAVS-EPGLT 202
                           +++    G++ G  SKD V I K+ V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 203 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGG 262
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 263 TDKRRYVEPLNYTPVTRKAYWQFKMEGVH--NSKGEKIACQNGCEAIADTGTSLIAGPKA 320
            ++R +  PLNY  +     WQ  ++ VH  N   +K         I D+ TS+I  P  
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNVSSKK------ANVILDSATSVITVPTE 348

Query: 321 QIEEI--QHYIGAIPLMHGEYMVSCERVPHLPDIALLIGGHSYVLKGSDYILNVTAMGKS 378
              +      +  +P +   Y+ +C     LP +        Y L+   Y+  +  +  +
Sbjct: 349 FFNQFVESASVFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFSA 406

Query: 379 ICLSGFMGIDLPPKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 425
           +C+   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 407 LCMLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff13204g066768 on AAW71458  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  124 bits (312), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 161/347 (46%), Gaps = 26/347 (7%)

Query: 87  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 145
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 146 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIAKICVAGQ--EFAEAVS-EPGLT 202
                           +++    G++ G  SKD V I K+ V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 203 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPNSKVGGEITIGG 262
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 263 TDKRRYVEPLNYTPVTRKAYWQFKMEGVH--NSKGEKIACQNGCEAIADTGTSLIAGPKA 320
            ++R +  PLNY  +     WQ  ++ VH  N   +K         I D+ TS+I  P  
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNVSSKK------ANVILDSATSVITVPTE 348

Query: 321 QIEEI--QHYIGAIPLMHGEYMVSCERVPHLPDIALLIGGHSYVLKGSDYILNVTAMGKS 378
              +      +  +P +   Y+ +C     LP +        Y L+   Y+  +  +  +
Sbjct: 349 FFNQFVESASVFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFSA 406

Query: 379 ICLSGFMGIDLPPKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 425
           +C+   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 407 LCMLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff13204g066768 on CAC20154  Eimepsin  (Protease)  [Eimeria tenella]
          Length = 255

 Score = 89.0 bits (219), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 82/167 (49%), Gaps = 15/167 (8%)

Query: 93  EMLRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHHXXXXXXX 152
           + L NY ++QY+G I IG+P + F V+FDTGSSNLWVP+ +C   +      H       
Sbjct: 92  QKLLNYHNSQYFGEIKIGTPGRRFVVVFDTGSSNLWVPAAEC---EKGGCAPHEKFDPKY 148

Query: 153 XXXXXXGRKMQ-------IQYGTGSMKGFVSKDTVCIAKICVAGQEFAEAVSEPGLTFVA 205
                  R +        IQYGTG+    + +D V I  I V  Q    AV E    F  
Sbjct: 149 SSTFSPIRSLTGDPAVAFIQYGTGACVLRMGRDIVEIGGIKVPNQAIGLAVEESTHPFAD 208

Query: 206 AKFDGILGMAFPEIS-----VLGVQPVFQQMISQQKVPEPVFSFWLN 247
             FDG++G+ FP++S          P+  QM+ ++ +   VFS +++
Sbjct: 209 LPFDGLVGLGFPDVSGEEGLPSSALPIVDQMVKEKVLDRNVFSVYMS 255
>M.Javanica_Scaff13204g066768 on AAS90844  Toxomepsin 2  (Protease)  [Toxoplasma gondii]
          Length = 255

 Score = 86.3 bits (212), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 16/193 (8%)

Query: 42  RSMLAQVGSLE--LFAKHRHDAL-RRRFALFAEKEGGQVEFDEENAVQIGG-----EIDE 93
           + + AQ GS+E  LF K   + L + R+     K+      +   A+  G      +  +
Sbjct: 35  QEIFAQTGSVEESLFHKPEFNVLLKNRYQETGLKDFISRLLEHHGALATGKHDAAQKAHQ 94

Query: 94  MLRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHHXXXXXXXX 153
            L N+ ++QY+G I +G+PP +F V+FDTGSSNLW+P+ +C      C+ H         
Sbjct: 95  ELLNFHNSQYFGEIQVGTPPVSFIVVFDTGSSNLWIPASECK--QGGCVPHTRFDPKTSS 152

Query: 154 XXXXXGRKMQ------IQYGTGSMKGFVSKDTVCIAKICVAGQEFAEAVSEPGLTFVAAK 207
                           IQYGTG+    ++KDTV I  I V  Q    A+ E    F    
Sbjct: 153 TYLPINAGAGEPAIAFIQYGTGACVLRMAKDTVSIGGIRVQNQTLGLALQESVHPFADLP 212

Query: 208 FDGILGMAFPEIS 220
           FDG++G+ FP+++
Sbjct: 213 FDGLVGLGFPDVA 225
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15986g073587
         (338 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1410g015471
         (121 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1584g016833
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14654g070410
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15553g072621
         (287 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1384g015241
         (349 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15111g071564
         (177 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14243g069397
         (121 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14690g070518
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14924g071098
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff159g002764
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15969g073544
         (344 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1523g016349
         (1096 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13635g067861
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14511g070068
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15703g072968
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1311g014670
         (1747 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13293g066985
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1423g015567
         (290 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15533g072574
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13094g066458
         (468 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348250  Plasmepsin II  (Proteases)  [Plasmodium falciparum]     180   1e-52
XP_001348249  Plasmepsin I  (Proteases)  [Plasmodium falciparum]      169   2e-48
AAW71459  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         157   4e-44
AAW71463  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         157   4e-44
AAW71460  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         157   5e-44
AAW71461  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         157   6e-44
AAW71462  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]         157   6e-44
AAW71454  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   125   2e-32
AAW71455  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   125   2e-32
AAW71456  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   125   2e-32
AAW71457  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   125   2e-32
AAW71458  Histo-aspartic protease  (Proteases)  [Plasmodium falc...   125   2e-32
CAC20154  Eimepsin  (Protease)  [Eimeria tenella]                      90   3e-21
AAS90844  Toxomepsin 2  (Protease)  [Toxoplasma gondii]                86   9e-20
>M.Javanica_Scaff13094g066458 on XP_001348250  Plasmepsin II  (Proteases)  [Plasmodium falciparum]
          Length = 453

 Score =  180 bits (457), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 170/333 (51%), Gaps = 17/333 (5%)

Query: 96  LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHHXXXXXXXXX 155
           L ++ +  +YG   +G   Q F+ I DTGS+NLWVPS KC      CL  H         
Sbjct: 132 LVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT--TAGCLTKHLYDSSKSRT 189

Query: 156 XXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGL--TFVAAKFDGIL 213
               G K+++ Y +G++ GF SKD V + N+ +   +F E +   G   T+ A+ FDGIL
Sbjct: 190 YEKDGTKVEMNYVSGTVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGIL 248

Query: 214 GMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPYSKVGGEITIGGTDKRRYVEPL 273
           G+ + ++S+  V P+  ++ +Q K+   +F+F+L    + K  G +TIGG ++R Y  PL
Sbjct: 249 GLGWKDLSIGSVDPIVVELKNQNKIENALFTFYL--PVHDKHTGFLTIGGIEERFYEGPL 306

Query: 274 NYTPVTRKAYWQFKMEG-VHNSKGEKIACQNGCQAIADTGTSLIAGPKNQIEEIQHYIGA 332
            Y  +    YWQ  ++  V N   EK  C      I D+GTS I  P + + ++   +  
Sbjct: 307 TYEKLNHDLYWQITLDAHVGNIMLEKANC------IVDSGTSAITVPTDFLNKMLQNLDV 360

Query: 333 IPLMHGEYMVSCERVPRLPDISLVIGGHSYVLKGSDYILNVTAMGKSICLSGFMGIDLPA 392
           I +    + V+     +LP          Y L+   Y+ ++  +G  +C+   +G+D P 
Sbjct: 361 IKVPFLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFPV 420

Query: 393 KVGELWILGDVFIGRYYTVFDVGQQRIGLAQAR 425
                +ILGD F+ +Y+TVFD   Q +G+A A+
Sbjct: 421 PT---FILGDPFMRKYFTVFDYDNQSVGIALAK 450
>M.Javanica_Scaff13094g066458 on XP_001348249  Plasmepsin I  (Proteases)  [Plasmodium falciparum]
          Length = 452

 Score =  169 bits (428), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 167/338 (49%), Gaps = 23/338 (6%)

Query: 96  LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHHXXXXXXXXX 155
           L +  +  YYG   IG   Q F+ IFDTGS+NLWVPS +C    I C   +         
Sbjct: 131 LNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN--TIGCKTKNLYDSNKSKT 188

Query: 156 XXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGL--TFVAAKFDGIL 213
               G K+++ Y +G++ GF SKD V IAN+     +F E     G    +   +FDGI+
Sbjct: 189 YEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSFP-YKFIEVTDTNGFEPAYTLGQFDGIV 247

Query: 214 GMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPYSKVGGEITIGGTDKRRYVEPL 273
           G+ + ++S+  V PV  ++ +Q K+ + VF+F+L  D   K  G +TIGG + R Y   L
Sbjct: 248 GLGWKDLSIGSVDPVVVELKNQNKIEQAVFTFYLPFD--DKHKGYLTIGGIEDRFYEGQL 305

Query: 274 NYTPVTRKAYWQFKMEGVH--NSKGEKIACQNGCQAIADTGTSLIAGPKNQIEEIQHYIG 331
            Y  +    YWQ  ++ +H  N   EK        AI D+GTS I  P   + +    + 
Sbjct: 306 TYEKLNHDLYWQVDLD-LHFGNLTVEK------ATAIVDSGTSSITAPTEFLNKFFEGLD 358

Query: 332 A--IPLMHGEYMVSCERVPRLPDISLVIGGHSYVLKGSDYILNVTAMGKSICLSGFMGID 389
              IP +   Y+ +C   P+LP +      + Y L+   Y+  +   G S+C+   + +D
Sbjct: 359 VVKIPFL-PLYITTCNN-PKLPTLEFRSATNVYTLEPEYYLQQIFDFGISLCMVSIIPVD 416

Query: 390 LPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARDE 427
           L       +ILGD F+ +Y+TVFD     +G A A+ +
Sbjct: 417 LNKNT---FILGDPFMRKYFTVFDYDNHTVGFALAKKK 451
>M.Javanica_Scaff13094g066458 on AAW71459  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  157 bits (398), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 173/347 (49%), Gaps = 26/347 (7%)

Query: 88  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 146
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 147 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGL--TF 204
                        G K++I YG+G+++G+ SKD + + ++ +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 205 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPYSKVGGEITIGGT 264
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYL--PVHDKHVGYLTIGGI 294

Query: 265 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSKGEKIACQNGCQAIADTGTSLIAGPKNQIE 324
           +   Y  PL Y  +    YWQ  ++ +H  K           A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFGK----YVMQKANAVVDSGTSTITAPTSFLN 349

Query: 325 EIQHYIGAI-----PLMHGEYMVSCERVPRLPDISLVIGGHSYVLKGSDYILNVTAMGKS 379
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFRDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 380 ICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 426
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff13094g066458 on AAW71463  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  157 bits (398), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 173/347 (49%), Gaps = 26/347 (7%)

Query: 88  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 146
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 147 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGL--TF 204
                        G K++I YG+G+++G+ SKD + + ++ +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 205 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPYSKVGGEITIGGT 264
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYL--PVHDKHVGYLTIGGI 294

Query: 265 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSKGEKIACQNGCQAIADTGTSLIAGPKNQIE 324
           +   Y  PL Y  +    YWQ  ++ +H  K           A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFGK----YVMQKANAVVDSGTSTITAPTSFLN 349

Query: 325 EIQHYIGAI-----PLMHGEYMVSCERVPRLPDISLVIGGHSYVLKGSDYILNVTAMGKS 379
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFRDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 380 ICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 426
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff13094g066458 on AAW71460  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  157 bits (396), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 173/347 (49%), Gaps = 26/347 (7%)

Query: 88  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 146
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 147 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGL--TF 204
                        G K++I YG+G+++G+ SKD + + ++ +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 205 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPYSKVGGEITIGGT 264
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYL--PVHDKHVGYLTIGGI 294

Query: 265 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSKGEKIACQNGCQAIADTGTSLIAGPKNQIE 324
           +   Y  PL Y  +    YWQ  ++ +H  K           A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFGK----YVMQKANAVVDSGTSTITAPTSFLN 349

Query: 325 EIQHYIGAI-----PLMHGEYMVSCERVPRLPDISLVIGGHSYVLKGSDYILNVTAMGKS 379
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFTDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 380 ICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 426
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff13094g066458 on AAW71461  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  157 bits (396), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 173/347 (49%), Gaps = 26/347 (7%)

Query: 88  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 146
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 147 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGL--TF 204
                        G K++I YG+G+++G+ SKD + + ++ +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 205 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPYSKVGGEITIGGT 264
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYL--PVHDKHVGYLTIGGI 294

Query: 265 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSKGEKIACQNGCQAIADTGTSLIAGPKNQIE 324
           +   Y  PL Y  +    YWQ  ++ +H  K           A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFGK----YVMQKANAVVDSGTSTITAPTSFLN 349

Query: 325 EIQHYIGAI-----PLMHGEYMVSCERVPRLPDISLVIGGHSYVLKGSDYILNVTAMGKS 379
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFTDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 380 ICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 426
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff13094g066458 on AAW71462  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score =  157 bits (396), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 173/347 (49%), Gaps = 26/347 (7%)

Query: 88  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 146
           +G E D + L +  +  +YG   IG+  Q F  IFDTGS+NLWVPS  C    I C   H
Sbjct: 120 LGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCD--SIGCSTKH 177

Query: 147 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGL--TF 204
                        G K++I YG+G+++G+ SKD + + ++ +   +F E      L   +
Sbjct: 178 LYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIY 236

Query: 205 VAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPYSKVGGEITIGGT 264
             ++FDGILG+ + ++S+  + PV  ++  Q K+   +F+F+L    + K  G +TIGG 
Sbjct: 237 SGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYL--PVHDKHVGYLTIGGI 294

Query: 265 DKRRYVEPLNYTPVTRKAYWQFKMEGVHNSKGEKIACQNGCQAIADTGTSLIAGPKNQIE 324
           +   Y  PL Y  +    YWQ  ++ +H  K           A+ D+GTS I  P + + 
Sbjct: 295 ESDFYEGPLTYEKLNHDLYWQIDLD-IHFGK----YVMQKANAVVDSGTSTITAPTSFLN 349

Query: 325 EIQHYIGAI-----PLMHGEYMVSCERVPRLPDISLVIGGHSYVLKGSDYILNVTAMGKS 379
           +    +  I     PL    Y+ +C+    LP +      + Y L+   Y+  ++ +  +
Sbjct: 350 KFFTDMNVIKVPFLPL----YVTTCDN-DDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPA 404

Query: 380 ICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 426
           +C+   + +D+       +ILGD F+ +Y+TVFD  ++ +G A A++
Sbjct: 405 LCMLYILPVDIDDNT---FILGDPFMRKYFTVFDYEKESVGFAVAKN 448
>M.Javanica_Scaff13094g066458 on AAW71454  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  125 bits (313), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 163/348 (46%), Gaps = 28/348 (8%)

Query: 88  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 146
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 147 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQ--EFAEAVS-EPGLT 203
                           +++    G++ G  SKD V I  + V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 204 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPYSKVGGEITIGG 263
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 264 TDKRRYVEPLNYTPVTRKAYWQFKMEGVH--NSKGEKIACQNGCQAIADTGTSLIAGPK- 320
            ++R +  PLNY  +     WQ  ++ VH  N   +K         I D+ TS+I  P  
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNVSSKK------ANVILDSATSVITVPTE 348

Query: 321 --NQIEEIQHYIGAIPLMHGEYMVSCERVPRLPDISLVIGGHSYVLKGSDYILNVTAMGK 378
             NQ  E    +  +P +   Y+ +C    +LP +        Y L+   Y+  +  +  
Sbjct: 349 FFNQFVESAS-VFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFS 405

Query: 379 SICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 426
           ++C+   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 406 ALCMLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff13094g066458 on AAW71455  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  125 bits (313), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 163/348 (46%), Gaps = 28/348 (8%)

Query: 88  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 146
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 147 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQ--EFAEAVS-EPGLT 203
                           +++    G++ G  SKD V I  + V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 204 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPYSKVGGEITIGG 263
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 264 TDKRRYVEPLNYTPVTRKAYWQFKMEGVH--NSKGEKIACQNGCQAIADTGTSLIAGPK- 320
            ++R +  PLNY  +     WQ  ++ VH  N   +K         I D+ TS+I  P  
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNVSSKK------ANVILDSATSVITVPTE 348

Query: 321 --NQIEEIQHYIGAIPLMHGEYMVSCERVPRLPDISLVIGGHSYVLKGSDYILNVTAMGK 378
             NQ  E    +  +P +   Y+ +C    +LP +        Y L+   Y+  +  +  
Sbjct: 349 FFNQFVESAS-VFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFS 405

Query: 379 SICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 426
           ++C+   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 406 ALCMLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff13094g066458 on AAW71456  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  125 bits (313), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 163/348 (46%), Gaps = 28/348 (8%)

Query: 88  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 146
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 147 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQ--EFAEAVS-EPGLT 203
                           +++    G++ G  SKD V I  + V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 204 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPYSKVGGEITIGG 263
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 264 TDKRRYVEPLNYTPVTRKAYWQFKMEGVH--NSKGEKIACQNGCQAIADTGTSLIAGPK- 320
            ++R +  PLNY  +     WQ  ++ VH  N   +K         I D+ TS+I  P  
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNVSSKK------ANVILDSATSVITVPTE 348

Query: 321 --NQIEEIQHYIGAIPLMHGEYMVSCERVPRLPDISLVIGGHSYVLKGSDYILNVTAMGK 378
             NQ  E    +  +P +   Y+ +C    +LP +        Y L+   Y+  +  +  
Sbjct: 349 FFNQFVESAS-VFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFS 405

Query: 379 SICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 426
           ++C+   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 406 ALCMLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff13094g066458 on AAW71457  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  125 bits (313), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 163/348 (46%), Gaps = 28/348 (8%)

Query: 88  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 146
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 147 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQ--EFAEAVS-EPGLT 203
                           +++    G++ G  SKD V I  + V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 204 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPYSKVGGEITIGG 263
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 264 TDKRRYVEPLNYTPVTRKAYWQFKMEGVH--NSKGEKIACQNGCQAIADTGTSLIAGPK- 320
            ++R +  PLNY  +     WQ  ++ VH  N   +K         I D+ TS+I  P  
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNVSSKK------ANVILDSATSVITVPTE 348

Query: 321 --NQIEEIQHYIGAIPLMHGEYMVSCERVPRLPDISLVIGGHSYVLKGSDYILNVTAMGK 378
             NQ  E    +  +P +   Y+ +C    +LP +        Y L+   Y+  +  +  
Sbjct: 349 FFNQFVESAS-VFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFS 405

Query: 379 SICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 426
           ++C+   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 406 ALCMLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff13094g066458 on AAW71458  Histo-aspartic protease  (Proteases)  [Plasmodium
           falciparum]
          Length = 451

 Score =  125 bits (313), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 163/348 (46%), Gaps = 28/348 (8%)

Query: 88  IGGEIDEM-LRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHH 146
           +G E D + L++  +   +G   +G   Q F+ +F T SSN+WVPS KC     +C   +
Sbjct: 122 LGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT--SESCESKN 179

Query: 147 XXXXXXXXXXXXXGRKMQIQYGTGSMKGFVSKDTVCIANICVAGQ--EFAEAVS-EPGLT 203
                           +++    G++ G  SKD V I  + V  +  E  E V  EP   
Sbjct: 180 HYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEP--F 237

Query: 204 FVAAKFDGILGMAFPEISVLGVQPVFQQMISQQKVPEPVFSFWLNRDPYSKVGGEITIGG 263
           +  +  DG+ G+ + ++S+  + P   ++ +Q K+ + V+S +L   P +K  G +TIGG
Sbjct: 238 YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYL--PPENKNKGYLTIGG 295

Query: 264 TDKRRYVEPLNYTPVTRKAYWQFKMEGVH--NSKGEKIACQNGCQAIADTGTSLIAGPK- 320
            ++R +  PLNY  +     WQ  ++ VH  N   +K         I D+ TS+I  P  
Sbjct: 296 IEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNVSSKK------ANVILDSATSVITVPTE 348

Query: 321 --NQIEEIQHYIGAIPLMHGEYMVSCERVPRLPDISLVIGGHSYVLKGSDYILNVTAMGK 378
             NQ  E    +  +P +   Y+ +C    +LP +        Y L+   Y+  +  +  
Sbjct: 349 FFNQFVESAS-VFKVPFL-SLYVTTCGNT-KLPTLEYRSPNKVYTLEPKQYLEPLENIFS 405

Query: 379 SICLSGFMGIDLPAKVGELWILGDVFIGRYYTVFDVGQQRIGLAQARD 426
           ++C+   + IDL       ++LGD F+ +Y+TV+D     +G A A++
Sbjct: 406 ALCMLNIVPIDLEKNT---FVLGDPFMRKYFTVYDYDNHTVGFALAKN 450
>M.Javanica_Scaff13094g066458 on CAC20154  Eimepsin  (Protease)  [Eimeria tenella]
          Length = 255

 Score = 89.7 bits (221), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 15/167 (8%)

Query: 94  EMLRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHHXXXXXXX 153
           + L NY ++QY+G I IG+P + F V+FDTGSSNLWVP+ +C      C  H        
Sbjct: 92  QKLLNYHNSQYFGEIKIGTPGRRFVVVFDTGSSNLWVPAAEC--EKGGCAPHEKFDPKYS 149

Query: 154 XXXXXXGRKMQ-------IQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGLTFVA 206
                  R +        IQYGTG+    + +D V I  I V  Q    AV E    F  
Sbjct: 150 STFSPI-RSLTGDPAVAFIQYGTGACVLRMGRDIVEIGGIKVPNQAIGLAVEESTHPFAD 208

Query: 207 AKFDGILGMAFPEIS-----VLGVQPVFQQMISQQKVPEPVFSFWLN 248
             FDG++G+ FP++S          P+  QM+ ++ +   VFS +++
Sbjct: 209 LPFDGLVGLGFPDVSGEEGLPSSALPIVDQMVKEKVLDRNVFSVYMS 255
>M.Javanica_Scaff13094g066458 on AAS90844  Toxomepsin 2  (Protease)  [Toxoplasma gondii]
          Length = 255

 Score = 85.5 bits (210), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 16/193 (8%)

Query: 43  RSMLTQVGSLE--LFAKHRHDAL-RRRFALFAEKEGGQVEFDEENAVQIGG-----EIDE 94
           + +  Q GS+E  LF K   + L + R+     K+      +   A+  G      +  +
Sbjct: 35  QEIFAQTGSVEESLFHKPEFNVLLKNRYQETGLKDFISRLLEHHGALATGKHDAAQKAHQ 94

Query: 95  MLRNYMDAQYYGPISIGSPPQNFSVIFDTGSSNLWVPSKKCPFYDIACLLHHXXXXXXXX 154
            L N+ ++QY+G I +G+PP +F V+FDTGSSNLW+P+ +C      C+ H         
Sbjct: 95  ELLNFHNSQYFGEIQVGTPPVSFIVVFDTGSSNLWIPASEC--KQGGCVPHTRFDPKTSS 152

Query: 155 XXXXXGRKMQ------IQYGTGSMKGFVSKDTVCIANICVAGQEFAEAVSEPGLTFVAAK 208
                           IQYGTG+    ++KDTV I  I V  Q    A+ E    F    
Sbjct: 153 TYLPINAGAGEPAIAFIQYGTGACVLRMAKDTVSIGGIRVQNQTLGLALQESVHPFADLP 212

Query: 209 FDGILGMAFPEIS 221
           FDG++G+ FP+++
Sbjct: 213 FDGLVGLGFPDVA 225
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13372g067181
         (234 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13482g067460
         (796 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1295g014530
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1572g016739
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1399g015377
         (1776 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1329g014814
         (521 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1420g015544
         (198 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1339g014884
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14659g070425
         (354 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13839g068406
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1394g015329
         (480 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]           366   e-127
AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]            366   e-127
AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]       347   e-119
CAA87086  Hsp70  (Heat shock protein)  [Eimeria tenella]              230   6e-74
>M.Javanica_Scaff1394g015329 on AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score =  366 bits (939), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 183/250 (73%), Positives = 211/250 (84%), Gaps = 4/250 (1%)

Query: 47  IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLNPEN 106
           +GIDLGTTYSCVGV+KN  VEIIANDQGNR TPSYVAFT+  ERL+GDAAKNQ+  NPEN
Sbjct: 7   VGIDLGTTYSCVGVWKNDAVEIIANDQGNRTTPSYVAFTDT-ERLVGDAAKNQVARNPEN 65

Query: 107 TIFDAKRLIGREFTDKTVQDDMKLWPFGV-ADKSNKPHIKANVNGEIKQFAPEEISAMVL 165
           TIFDAKRLIGR+F D +VQ DMK WPF V A   +KP I+    GE K F PEE+SAMVL
Sbjct: 66  TIFDAKRLIGRKFDDPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEEVSAMVL 125

Query: 166 GKMKEIAEAYLGHEVTHAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIAYG 225
           GKMKEIAEAYLG EV  AV+TVPAYFND+QRQATKDAGTI+GL+V+RIINEPTAAAIAYG
Sbjct: 126 GKMKEIAEAYLGKEVKEAVITVPAYFNDSQRQATKDAGTIAGLSVLRIINEPTAAAIAYG 185

Query: 226 LDKK-EGERNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRTMEYFIKL 284
           LDKK  GE N+L+FD+GGGTFDVSLLTI++G+FEV AT GDTHLGGEDFD R +++ ++ 
Sbjct: 186 LDKKGCGEMNVLIFDMGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVDFCVQD 245

Query: 285 IKKKT-GKDL 293
            K+K  GKD+
Sbjct: 246 FKRKNRGKDI 255
>M.Javanica_Scaff1394g015329 on AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score =  366 bits (939), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 183/250 (73%), Positives = 211/250 (84%), Gaps = 4/250 (1%)

Query: 47  IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLNPEN 106
           +GIDLGTTYSCVGV+KN  VEIIANDQGNR TPSYVAFT+  ERL+GDAAKNQ+  NPEN
Sbjct: 7   VGIDLGTTYSCVGVWKNDAVEIIANDQGNRTTPSYVAFTDT-ERLVGDAAKNQVARNPEN 65

Query: 107 TIFDAKRLIGREFTDKTVQDDMKLWPFGV-ADKSNKPHIKANVNGEIKQFAPEEISAMVL 165
           TIFDAKRLIGR+F D +VQ DMK WPF V A   +KP I+    GE K F PEE+SAMVL
Sbjct: 66  TIFDAKRLIGRKFDDPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEEVSAMVL 125

Query: 166 GKMKEIAEAYLGHEVTHAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIAYG 225
           GKMKEIAEAYLG EV  AV+TVPAYFND+QRQATKDAGTI+GL+V+RIINEPTAAAIAYG
Sbjct: 126 GKMKEIAEAYLGKEVKEAVITVPAYFNDSQRQATKDAGTIAGLSVLRIINEPTAAAIAYG 185

Query: 226 LDKK-EGERNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRTMEYFIKL 284
           LDKK  GE N+L+FD+GGGTFDVSLLTI++G+FEV AT GDTHLGGEDFD R +++ ++ 
Sbjct: 186 LDKKGCGEMNVLIFDMGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVDFCVQD 245

Query: 285 IKKKT-GKDL 293
            K+K  GKD+
Sbjct: 246 FKRKNRGKDI 255
>M.Javanica_Scaff1394g015329 on AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]
          Length = 255

 Score =  347 bits (890), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 176/256 (68%), Positives = 207/256 (80%), Gaps = 4/256 (1%)

Query: 63  NGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLNPENTIFDAKRLIGREFTDK 122
           N  V+I+ NDQGNR TPSYVAFTE  ERLIGDAAKNQ+  NPENT+FDAKRLIGR+F D+
Sbjct: 1   NDTVDIVPNDQGNRTTPSYVAFTET-ERLIGDAAKNQVARNPENTVFDAKRLIGRKFDDQ 59

Query: 123 TVQDDMKLWPFGVA-DKSNKPHIKANVNGEIKQFAPEEISAMVLGKMKEIAEAYLGHEVT 181
            VQ DM  WPF V     +KP I  N  GE K+F  EEISAMVL KMKEI+EAYLG ++ 
Sbjct: 60  AVQSDMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEISAMVLQKMKEISEAYLGRQIK 119

Query: 182 HAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIAYGLDKK-EGERNILVFDL 240
           +AVVTVPAYFND+QRQATKDAG I+GLNV+RIINEPTAAAIAYGLDKK  GERN+L+FDL
Sbjct: 120 NAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKGTGERNVLIFDL 179

Query: 241 GGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRTMEYFIKLIKKKT-GKDLRKDNRA 299
           GGGTFDVSLLTI++G+FEV AT GDTHLGGEDFD R +E+ ++  K+K  G DL  + RA
Sbjct: 180 GGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVEFCVQDFKRKNRGMDLTSNARA 239

Query: 300 VQKLRREVEKAKRALS 315
           +++LR + E+AKR LS
Sbjct: 240 LRRLRTQCERAKRTLS 255
>M.Javanica_Scaff1394g015329 on CAA87086  Hsp70  (Heat shock protein)  [Eimeria tenella]
          Length = 255

 Score =  230 bits (587), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 114/203 (56%), Positives = 149/203 (73%), Gaps = 4/203 (1%)

Query: 44  GTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLN 103
           G ++GIDLGTT SCV V +  + +++ N +G R TPS VAFT++G+RL+G  AK Q   N
Sbjct: 57  GDVVGIDLGTTNSCVAVMEGSQPKVLENSEGMRTTPSVVAFTKDGQRLVGVVAKRQAITN 116

Query: 104 PENTIFDAKRLIGREFTDKTVQDDMKLWPFGVADKSNKPHIKANVNGEIKQFAPEEISAM 163
           PENT F  KRLIGR F ++ +  + K+ P+ V    N     A V G  K+++P +I A 
Sbjct: 117 PENTFFSTKRLIGRSFDEEAIAKERKILPYKVIRADNG---DAWVEGWGKKYSPSQIGAF 173

Query: 164 VLGKMKEIAEAYLGHEVTHAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIA 223
           VL KMKE AE+YLG +V  AV+TVPAYFND+QRQATKDAG I+GL+V+RIINEPTAAA+A
Sbjct: 174 VLMKMKETAESYLGRDVNQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAAALA 233

Query: 224 YGLDKKEGERNILVFDLGGGTFD 246
           YG++K++G R I V+DLGGGTFD
Sbjct: 234 YGMEKEDG-RTIAVYDLGGGTFD 255
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14558g070182
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14678g070476
         (163 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14620g070336
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13972g068716
         (198 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13895g068542
         (259 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1572g016748
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13648g067902
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13191g066733
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12921g066028
         (497 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1373g015159
         (263 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15815g073218
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14024g068857
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15778g073144
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15174g071714
         (398 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15338g072101
         (131 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1352g014975
         (292 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14788g070780
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff138g002475
         (227 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13470g067423
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13052g066348
         (248 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13742g068150
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14009g068814
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15542g072594
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12956g066121
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1529g016404
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1297g014545
         (209 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13047g066329
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1496g016140
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16019g073672
         (308 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13998g068784
         (555 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1614g017062
         (168 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13402g067250
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15911g073425
         (270 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1592g016892
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff149g002618
         (379 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13188g066723
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff130g002372
         (506 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13589g067730
         (198 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1367g015116
         (277 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15746g073067
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1492g016121
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14364g069715
         (250 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15160g071672
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14388g069768
         (372 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1373g015162
         (97 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1611g017036
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12995g066222
         (201 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15483g072445
         (350 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]          159   4e-47
P92132  CP2  (Cysteine protease)  [Giardia duodenalis]                103   6e-27
AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    80   2e-17
XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium falc...    80   2e-17
PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]    78   1e-16
CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]        76   4e-16
ABC02174  Falstatin  (Others)  [Plasmodium falciparum]                 72   7e-15
XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium falc...    72   7e-15
XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]           69   3e-14
AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]           62   2e-12
CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]            57   3e-10
XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]           55   2e-09
CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]            50   4e-08
XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]           50   6e-08
AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]            44   4e-06
CAA38278  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]          39   3e-05
EAN83733  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]          39   3e-05
>M.Javanica_Scaff15483g072445 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score =  159 bits (403), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/332 (34%), Positives = 157/332 (47%), Gaps = 43/332 (12%)

Query: 31  IVQKLVDEINGLTGGVWTAEVNTITR-LPLIEQKKLCGTIIPEENRNHTQAEPPKVEGTV 89
           + +  VD +N L  G+W A+ + + + + L E K+L G I   +  N+    P +     
Sbjct: 32  LSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVI---KKNNNASILPKRRFTEE 88

Query: 90  KGSCSTKIEFDARTKWSGCSAIIGRIQDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTG 149
           +        FD+   W  C  I  +I DQ  CGSCWAV+ AS  +DR+C          G
Sbjct: 89  EARAPLPSSFDSAEAWPNCPTI-PQIADQSACGSCWAVAAASAMSDRFCT--------MG 139

Query: 150 TDAGSQFSALDVLSC-SMSRDGCQGGWPLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSG 208
                  SA D+L+C S   DGC GG P  AW +  S G+ +         C+PYP+   
Sbjct: 140 GVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLVSDY-------CQPYPFPHC 192

Query: 209 GATPRS-----PCKSACTAKWGTTYAKD-------KHFATGAKGLQGSTATVQAIKNEIM 256
               +S     PC           Y  D        + +  +  LQG    ++    E+ 
Sbjct: 193 SHHSKSKNGYPPCSQFNFDTPKCNYTCDDPTIPVVNYRSWTSYALQGEDDYMR----ELF 248

Query: 257 ANGPVVACFDVYNDFMSYKSGVYFKTSNARKVGGHAVRIIGWGTQTCNGKSMPFWLIANS 316
             GP    FDVY DF++Y SGVY   S  + +GGHAVR++GWGT   NG  +P+W IANS
Sbjct: 249 FRGPFEVAFDVYEDFIAYNSGVYHHVS-GQYLGGHAVRLVGWGTS--NG--VPYWKIANS 303

Query: 317 WSTGWGEKGLVKIRSGVNEVGIEKSGIAFGIP 348
           W+T WG  G   IR G +E GIE  G A GIP
Sbjct: 304 WNTEWGMDGYFLIRRGSSECGIEDGGSA-GIP 334
>M.Javanica_Scaff15483g072445 on P92132  CP2  (Cysteine protease)  [Giardia duodenalis]
          Length = 255

 Score =  103 bits (258), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 28/246 (11%)

Query: 56  RLPLIEQKKLCGTIIPEENRNHTQAEPPKVEGTVKGSCSTKIEFDARTKWSGCSAIIGRI 115
           R   + + ++   ++P     + +   P+  GT          FD R ++  C   I  +
Sbjct: 38  RFEGLTKDEISSLLMPVSFLKNAKGAAPR--GTFTDKDDVPESFDFREEYPHC---IPEV 92

Query: 116 QDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTGTDAGSQFSALDVLSCSMSRDGCQGGW 175
            DQG CGSCWA S+ +T+ DR C+A   +          ++S   V+SC      C GGW
Sbjct: 93  VDQGGCGSCWAFSSVATFGDRRCVAGLDKKP-------VKYSPQYVVSCDHGDMACNGGW 145

Query: 176 PLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTAKWGTTYAKDKHFA 235
             + WK++   G  T   +         PY SG  T R  C + C        +   H A
Sbjct: 146 LPNVWKFLTKTGTTTDECV---------PYKSGSTTLRGTCPTKCADG-----SSKVHLA 191

Query: 236 TGAKGLQGSTATVQAIKNEIMANGPVVACFDVYNDFMSYKSGVYFKTSNARKVGGHAVRI 295
           T A   +     + A+   +  +GP+   F V++DFM Y+SGVY  T    + GGHAV +
Sbjct: 192 T-ATSYKDYGLDIPAMMKALSTSGPLQVAFLVHSDFMYYESGVYQHTYGYME-GGHAVEM 249

Query: 296 IGWGTQ 301
           +G+GT 
Sbjct: 250 VGYGTD 255
>M.Javanica_Scaff15483g072445 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 79.7 bits (195), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 43/224 (19%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTGTDAGSQFSALDVLSCSMSRDGCQGG 174
           ++DQ  CGSCWA S+  +   +Y I    R  K  T      S  +++ CS    GC GG
Sbjct: 276 VKDQKNCGSCWAFSSIGSVESQYAI----RKNKLIT-----LSEQELVDCSFKNYGCNGG 326

Query: 175 WPLDAWK-WIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTAKWGTTYAKDKH 233
              +A++  I+  G+CT  D         YPY S    P       CT K+G      K+
Sbjct: 327 LINNAFEDMIELGGICTDDD---------YPYVSDA--PNLCNIDRCTEKYGI-----KN 370

Query: 234 FATGAKGLQGSTATVQAIKNEIMANGPVVACFDVYNDFMSYKSGVYFKTSNARKVGGHAV 293
           + +              +K  +   GP+     V +DF  YK G++           HAV
Sbjct: 371 YLSVPDN---------KLKEALRFLGPISISVAVSDDFAFYKEGIF--DGECGDQLNHAV 419

Query: 294 RIIGWGTQ------TCNGKSMPFWLIANSWSTGWGEKGLVKIRS 331
            ++G+G +      T  G+   +++I NSW   WGE+G + I +
Sbjct: 420 MLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIET 463
>M.Javanica_Scaff15483g072445 on XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 482

 Score = 79.7 bits (195), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 43/224 (19%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTGTDAGSQFSALDVLSCSMSRDGCQGG 174
           ++DQ  CGSCWA S+  +   +Y I    R  K  T      S  +++ CS    GC GG
Sbjct: 274 VKDQKNCGSCWAFSSIGSVESQYAI----RKNKLIT-----LSEQELVDCSFKNYGCNGG 324

Query: 175 WPLDAWK-WIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTAKWGTTYAKDKH 233
              +A++  I+  G+CT  D         YPY S    P       CT K+G      K+
Sbjct: 325 LINNAFEDMIELGGICTDDD---------YPYVSDA--PNLCNIDRCTEKYGI-----KN 368

Query: 234 FATGAKGLQGSTATVQAIKNEIMANGPVVACFDVYNDFMSYKSGVYFKTSNARKVGGHAV 293
           + +              +K  +   GP+     V +DF  YK G++           HAV
Sbjct: 369 YLSVPDN---------KLKEALRFLGPISISIAVSDDFPFYKEGIF--DGECGDELNHAV 417

Query: 294 RIIGWGTQ------TCNGKSMPFWLIANSWSTGWGEKGLVKIRS 331
            ++G+G +      T  G+   +++I NSW   WGE+G + I +
Sbjct: 418 MLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIET 461
>M.Javanica_Scaff15483g072445 on PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]
          Length = 569

 Score = 77.8 bits (190), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 102/254 (40%), Gaps = 75/254 (29%)

Query: 111 IIGRIQDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTGTDAGSQFSALDVLSCSMSRDG 170
           I+   +DQG CGSCWA ++       +    AK+ +   +     FS  +V+ CS    G
Sbjct: 344 IVHEPKDQGLCGSCWAFASVGNIESVF----AKKNKNILS-----FSEQEVVDCSKDNFG 394

Query: 171 CQGGWPLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTAKWGTTYAK 230
           C GG P  ++ ++    +C G + K K                               AK
Sbjct: 395 CDGGHPFYSFLYVLQNELCLGDEYKYK-------------------------------AK 423

Query: 231 DKHFATGAK-GLQGSTATVQAIK--------NEIMANGPVVACFDVYNDFMSYKSGVYFK 281
           D  F    +   + S +++ A+K        NE+   GP+     V NDF++Y  GVY  
Sbjct: 424 DDMFCLNYRCKRKVSLSSIGAVKENQLILALNEV---GPLSVNVGVNNDFVAYSEGVYNG 480

Query: 282 TSNARKVGGHAVRIIGWG------------TQTCNGKS---------MPFWLIANSWSTG 320
           T +      H+V ++G+G             QT N K          + +W+I NSWS  
Sbjct: 481 TCSEE--LNHSVLLVGYGQVEKTKLNYNNKIQTYNTKENSNQPDDNIIYYWIIKNSWSKK 538

Query: 321 WGEKGLVKIRSGVN 334
           WGE G +++    N
Sbjct: 539 WGENGFMRLSRNKN 552
>M.Javanica_Scaff15483g072445 on CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 450

 Score = 75.9 bits (185), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 94/225 (41%), Gaps = 42/225 (18%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTGTDAGSQFSALD---VLSCSMSRDGC 171
           ++DQGQCGSCWA ST      ++ +A            G+   +L    ++SC     GC
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVA------------GNPLVSLSEQMLVSCDTIDFGC 188

Query: 172 QGGWPLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSG-GATPRSPCKSACTAKWGTTYAK 230
            GG   +A+ WI +     G ++ T+     YPY SG G  P+            T +  
Sbjct: 189 GGGLMDNAFNWIVNS---NGGNVFTEAS---YPYVSGNGEQPQCQMNGHEIGAAITDHVD 242

Query: 231 DKHFATGAKGLQGSTATVQAIKNEIMANGPVVACFDVYNDFMSYKSGVYFKTSNARKVGG 290
                              AI   +  NGP+    D    FM Y  G+   TS   +   
Sbjct: 243 LPQ-------------DEDAIAAYLAENGPLAIAVDA-TSFMDYNGGIL--TSCTSEQLD 286

Query: 291 HAVRIIGWGTQTCNGKSMPFWLIANSWSTGWGEKGLVKIRSGVNE 335
           H V ++G+     +  + P+W+I NSWS  WGE G ++I  G N+
Sbjct: 287 HGVLLVGYN----DSSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQ 327
>M.Javanica_Scaff15483g072445 on ABC02174  Falstatin  (Others)  [Plasmodium falciparum]
          Length = 492

 Score = 72.0 bits (175), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 49/230 (21%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTGTDAGSQFSALDVLSCSMSRDGCQGG 174
           ++DQ  CGSCWA S+  +   +Y I +          A   FS  +++ CS+  +GC GG
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIRKK---------ALFLFSEQELVDCSVKNNGCYGG 334

Query: 175 WPLDAW-KWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTAKWGT-TYAK-- 230
           +  +A+   I   G+C+  D         YPY S    P +     C  ++   +Y    
Sbjct: 335 YITNAFDDMIDLGGLCSQDD---------YPYVSN--LPETCNLKRCNERYTIKSYVSIP 383

Query: 231 DKHFATGAKGLQGSTATVQAIKNEIMANGPVVACFDVYNDFMSYKSGVYFKTSNARKVGG 290
           D  F    + L                 GP+       +DF  Y+ G Y     A     
Sbjct: 384 DDKFKEALRYL-----------------GPISISIAASDDFAFYRGGFYDGECGA--APN 424

Query: 291 HAVRIIGWGTQ------TCNGKSMPFWLIANSWSTGWGEKGLVKIRSGVN 334
           HAV ++G+G +      T   +   +++I NSW + WGE G + + +  N
Sbjct: 425 HAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDEN 474
>M.Javanica_Scaff15483g072445 on XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 492

 Score = 72.0 bits (175), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 49/230 (21%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTGTDAGSQFSALDVLSCSMSRDGCQGG 174
           ++DQ  CGSCWA S+  +   +Y I +          A   FS  +++ CS+  +GC GG
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIRKK---------ALFLFSEQELVDCSVKNNGCYGG 334

Query: 175 WPLDAW-KWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTAKWGT-TYAK-- 230
           +  +A+   I   G+C+  D         YPY S    P +     C  ++   +Y    
Sbjct: 335 YITNAFDDMIDLGGLCSQDD---------YPYVSN--LPETCNLKRCNERYTIKSYVSIP 383

Query: 231 DKHFATGAKGLQGSTATVQAIKNEIMANGPVVACFDVYNDFMSYKSGVYFKTSNARKVGG 290
           D  F    + L                 GP+       +DF  Y+ G Y     A     
Sbjct: 384 DDKFKEALRYL-----------------GPISISIAASDDFAFYRGGFYDGECGA--APN 424

Query: 291 HAVRIIGWGTQ------TCNGKSMPFWLIANSWSTGWGEKGLVKIRSGVN 334
           HAV ++G+G +      T   +   +++I NSW + WGE G + + +  N
Sbjct: 425 HAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDEN 474
>M.Javanica_Scaff15483g072445 on XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]
          Length = 318

 Score = 69.3 bits (168), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 35/236 (14%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTGTDAGSQFSALDVLSCSMS--RDGCQ 172
           I+DQ  CGSC++ ++ +    R  +A +K+      D   Q     ++ CS+S    GC 
Sbjct: 110 IRDQASCGSCYSFASVAAIEGRLLVAGSKKFTVDDLDLSEQ----QLVDCSVSVGNKGCN 165

Query: 173 GGWPLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTAKWGTTYAKDK 232
           GG  L ++++++  G+    D         YPY +   T     K       G      K
Sbjct: 166 GGSLLLSFRYVKLNGIMQEKD---------YPYVAAEETCTYDKKKVAVKITG-----QK 211

Query: 233 HFATGAKGLQGSTATVQAIKNEIMANGPVVACFDVYNDFMSYKSGVYFKTSNARKVGGHA 292
               G++      A    +   I A+G           F  YKSG+Y     +     H 
Sbjct: 212 LVRPGSEKALMRAAAEGPVAAAIDASGV---------KFQLYKSGIYNSKECSSTQLNHG 262

Query: 293 VRIIGWGTQTCNGKSMPFWLIANSWSTGWGEKGLVKI-RSGVNEVGIEKSGIAFGI 347
           V ++G+GTQ  NG    +W++ NSW T WG++G V + R+  N+ GI  SG A+ +
Sbjct: 263 VAVVGYGTQ--NGTE--YWIVRNSWGTIWGDQGYVLMSRNKNNQCGI-ASGAAYPV 313
>M.Javanica_Scaff15483g072445 on AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 206

 Score = 62.4 bits (150), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 82/212 (38%), Gaps = 42/212 (19%)

Query: 111 IIGRIQDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTGTDAGSQFSALDVLSCSMSRDG 170
           ++  IQDQGQCGSCWA S       +Y I   +           + S  +++ C  + DG
Sbjct: 32  VVNPIQDQGQCGSCWAFSAIQAQESQYAITSGEL---------QKLSEQNLVDCVTTCDG 82

Query: 171 CQGGWPLDAWKWIQSKGVCTGTDIKTKGGC----KPYPYSSGGATPRSPCKSACTAKWGT 226
           C+GG   +A+ ++          IK + G       YPY++                +  
Sbjct: 83  CEGGLMTNAYDYV----------IKYQDGKFMLENDYPYTA--------------YYYDC 118

Query: 227 TYAKDKHFATGAKGLQGSTATVQAIKNEIMANGPVVACFDV-YNDFMSYKSGVYFKTSNA 285
            +  DK  +     +         +  +I  NGP     D  +  F  Y  G+Y   S +
Sbjct: 119 LFDTDKAVSNIVSYINVVEGDENDLATKISTNGPAAVAIDASHYSFQLYSQGIYNVPSRS 178

Query: 286 RKVGGHAVRIIGWGTQTCNGKSMPFWLIANSW 317
                H V  +G+G +     S  +W++ NSW
Sbjct: 179 SYGLDHGVGCVGYGAE----GSTKYWIVKNSW 206
>M.Javanica_Scaff15483g072445 on CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 57.0 bits (136), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 98/253 (38%), Gaps = 58/253 (22%)

Query: 33  QKLVDEINGLTGGVWTAEVNTITRLPLIEQKKLCGT-IIPEENRNHTQAEPPKVEGTVKG 91
           ++LV E N    G +   +N +  L   E + L G   + +++ N  + + P  +     
Sbjct: 48  KRLVQEHNAANKG-FKLGLNKLAHLTQSEYRSLLGAKRLGQKSGNFFKCDAPANDAV--- 103

Query: 92  SCSTKIEFDARTKWSGCSAIIGRIQDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTGTD 151
                   D R K      I+ +I+DQGQCGSCWA S       RY      +  K   D
Sbjct: 104 --------DWRDK-----GIVNKIKDQGQCGSCWAFSAIQASESRYA-----QANKQLLD 145

Query: 152 AGSQFSALDVLSCSMSRDGCQGGWPLDAWKWIQSKGVCTGTDIKTKGG----CKPYPYSS 207
              Q    +++ C  S  GC GGWP  A  ++          +K + G       YPY++
Sbjct: 146 LAEQ----NIVDCVTSCYGCNGGWPSKAIDYV----------VKHQAGKFMLTADYPYTA 191

Query: 208 GGATPRSPCKSACTAKWGTTYAKDKHFATGAKGLQGSTATVQAIKNEIMANGPVVACFDV 267
              T    CK   +   G T   D+   T A+  + ++             G V  C D 
Sbjct: 192 RDGT----CKFHASKSVGLTKGYDEVKDTEAELAKAAS------------KGVVSVCIDA 235

Query: 268 -YNDFMSYKSGVY 279
            +  F  Y SG+Y
Sbjct: 236 SHYSFQLYTSGIY 248
>M.Javanica_Scaff15483g072445 on XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 55.1 bits (131), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 88/219 (40%), Gaps = 38/219 (17%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTGTDAGSQFSALDVLSCSMS--RDGCQ 172
           I+DQG CGSC+   + +    R  I      +K G       S   ++ C+     +GC 
Sbjct: 109 IRDQGNCGSCYTFGSIAALEGRLLI------EKGGDSETLDLSEEHMVQCTREDGNNGCN 162

Query: 173 GGWPLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTAKWGTTYAKDK 232
           GG   + + +I   G+   +D         YPY+   +T RS  K+    K     A++ 
Sbjct: 163 GGLGSNVYNYIMENGIAKESD---------YPYTGSDSTCRSDVKAFAKIKSYNRVARNN 213

Query: 233 HFATGAKGLQGSTATVQAIKNEIMANGPVVACFDVYNDFMSYKSGVYF--KTSNARKVGG 290
                A   QG          ++  +   V        F  YKSG Y   +  N      
Sbjct: 214 EVELKAAISQGLV--------DVSIDASSV-------QFQLYKSGAYTDKQCKNNYFALN 258

Query: 291 HAVRIIGWGTQTCNGKSMPFWLIANSWSTGWGEKGLVKI 329
           H V  +G+G    +GK    W++ NSW TGWGEKG + +
Sbjct: 259 HEVCAVGYGV--VDGKEC--WIVRNSWGTGWGEKGYINM 293
>M.Javanica_Scaff15483g072445 on CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 50.4 bits (119), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 106/273 (38%), Gaps = 53/273 (19%)

Query: 33  QKLVDEINGLTGGVWTAEVNTITRLPLIEQKKLCGTIIPEENRNHTQAEPPKVEGTVKGS 92
           ++LV E N    G +T  +N +  L   E   L G  + +  R             VK +
Sbjct: 25  KRLVQEHNRANLG-FTVALNKLAHLTPAEYNSLLGFRMNKAERK-----------AVKSN 72

Query: 93  CSTKIEFDARTKWSGCSAIIGRIQDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTGTDA 152
                + D R K       +  I+DQGQCGSCWA S       +Y I+            
Sbjct: 73  AIANADCDWRKK-----GAVNPIKDQGQCGSCWAFSAIQAQESQYYISFKTL-------- 119

Query: 153 GSQFSALDVLSCSMSRDGCQGGWPLDAWKWI---QSKGVCTGTDIKTKGGCKPYPYSSGG 209
               S  +++ C  +  GC GG    A+ ++   QS    T  D         YPY++  
Sbjct: 120 -QSLSEQNLVDCVTTCYGCNGGLMDAAYDYVVKHQSGKFMTEAD---------YPYTARD 169

Query: 210 ATPRSPCKSACTAKWGTTYAKDKHFATGAKGLQGSTATVQAIKNEIMANGPVVACFDVYN 269
            +    CK    A  GT+  + K +   A+G +   AT      ++   GP     D   
Sbjct: 170 GS----CK--FNAAKGTS--QIKSYVNVAEGDEKDLAT------KVSTLGPAAIAIDASA 215

Query: 270 -DFMSYKSGVYFKTSNARKVGGHAVRIIGWGTQ 301
             F  Y SG+Y +++ +     H V  +G+GT+
Sbjct: 216 WSFQLYSSGIYDESACSSYNLDHGVGCVGYGTE 248
>M.Javanica_Scaff15483g072445 on XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 50.1 bits (118), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 96/232 (41%), Gaps = 46/232 (19%)

Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTGTDAGS-QFSALDVLSCSMSRDGCQG 173
           I+DQ QCGSC+   + +    R  I +       G DA +   S   ++ C+  RD    
Sbjct: 109 IRDQAQCGSCYTFGSLAALEGRLLIEK-------GGDANTLDLSEEHMVQCT--RDNGNN 159

Query: 174 GWPLD----AWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTAKWGTTYA 229
           G         + +I   GV   +D         YPY+   +T ++  KS         +A
Sbjct: 160 GCNGGLGSNVYDYIIEHGVAKESD---------YPYTGSDSTCKTNVKS---------FA 201

Query: 230 KDKHFATGAKGLQGSTATVQAIKNEIMANGPVVACFDVYN-DFMSYKSGVYFKTS--NAR 286
           K   +    K  + + A ++A     ++ G V    D  +  F  YKSG Y  T   N  
Sbjct: 202 KITGYT---KVPRNNEAELKAA----LSQGLVDVSIDASSAKFQLYKSGAYTDTKCKNNY 254

Query: 287 KVGGHAVRIIGWGTQTCNGKSMPFWLIANSWSTGWGEKGLVKIRSGVNEVGI 338
               H V  +G+G    +GK    W++ NSW TGWG+KG + +    N  G+
Sbjct: 255 FALNHEVCAVGYGV--VDGKEC--WIVRNSWGTGWGDKGYINMVIEGNTCGV 302
>M.Javanica_Scaff15483g072445 on AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 44.3 bits (103), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 96/251 (38%), Gaps = 53/251 (21%)

Query: 33  QKLVDEINGLTGGVWTAEVNTITRLPLIEQKKLCGTIIPEENRNHTQAEPPKVEGTVKGS 92
           ++LV E N    G +T  +N +  L   E   L G  + +  R             VK +
Sbjct: 38  KRLVQEHNRANLG-FTVALNKLAHLTPAEYNSLLGFRMNKAERK-----------AVKSN 85

Query: 93  CSTKIEFDARTKWSGCSAIIGRIQDQGQCGSCWAVSTASTYTDRYCIARAKRGQKTGTDA 152
                + D R K       +  I+DQGQCGSCWA S       +Y I+      KT    
Sbjct: 86  AIANADCDWRKK-----GAVNPIKDQGQCGSCWAFSAIQAQESQYYISF-----KTLQSL 135

Query: 153 GSQFSALDVLSCSMSRDGCQGGWPLDAWKWI---QSKGVCTGTDIKTKGGCKPYPYSSGG 209
             Q    +++ C  +  GC GG    A+ ++   QS    T  D         YPY++  
Sbjct: 136 SEQ----NLVDCVTTCYGCNGGLMDAAYDYVVKHQSGKFMTEAD---------YPYTARD 182

Query: 210 ATPRSPCKSACTAKWGTTYAKDKHFATGAKGLQGSTATVQAIKNEIMANGPVVACFDVYN 269
            +    CK    A  GT+  + K +   A+G +   AT      ++   GP     D   
Sbjct: 183 GS----CK--FNAAKGTS--QIKSYVNVAEGDEKDLAT------KVSTLGPAAIAIDASA 228

Query: 270 -DFMSYKSGVY 279
             F  Y SG+Y
Sbjct: 229 WSFQLYSSGIY 239
>M.Javanica_Scaff15483g072445 on CAA38278  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]
          Length = 70

 Score = 38.5 bits (88), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 13/29 (44%), Positives = 21/29 (72%)

Query: 307 SMPFWLIANSWSTGWGEKGLVKIRSGVNE 335
           ++P+W+I NSW+  WGE G ++I  G N+
Sbjct: 2   AVPYWIIKNSWTAQWGEDGYIRIAKGSNQ 30
>M.Javanica_Scaff15483g072445 on EAN83733  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]
          Length = 70

 Score = 38.5 bits (88), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 25/35 (71%)

Query: 307 SMPFWLIANSWSTGWGEKGLVKIRSGVNEVGIEKS 341
           ++P W+I NSW+T WGE G ++I  G N+  ++++
Sbjct: 10  TVPHWIIKNSWTTQWGEDGYIRIAKGSNQCLVKEA 44
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13875g068495
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14046g068915
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1551g016577
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14576g070230
         (317 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1564g016679
         (131 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13401g067246
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15254g071902
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1294g014517
         (1118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14125g069097
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14576g070229
         (175 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13116g066512
         (121 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14796g070801
         (554 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16157g073950
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1540g016486
         (186 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1553g016602
         (200 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1449g015797
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14815g070849
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16064g073772
         (226 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16099g073844
         (405 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14g000364
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1446g015773
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13862g068464
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1475g015994
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13782g068266
         (136 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1324g014769
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1356g015012
         (424 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13877g068498
         (205 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13469g067417
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13093g066455
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13g000335
         (730 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1601g016962
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13579g067695
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1461g015879
         (170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15055g071436
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15834g073262
         (319 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1444g015757
         (649 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1385g015255
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15017g071329
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1328g014797
         (315 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1481g016036
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13058g066369
         (336 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1553g016599
         (220 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1307g014642
         (748 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13736g068136
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1604g016984
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]              46   9e-08
XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]            44   3e-07
XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]             43   1e-06
BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]               40   8e-06
>M.Javanica_Scaff1604g016984 on BAD34969  Rab7B  (Establishment)  [Entamoeba histolytica]
          Length = 207

 Score = 45.8 bits (107), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 12/120 (10%)

Query: 16  RSLFWKEEMELTLVGLQGSGKTTFVNVIASGQFTEDMIPTVG--FNMRKITKGN--VTIK 71
           R+LF     ++ ++G  G GKT+ +N   + QF+     T+G  F  + IT  +  ++++
Sbjct: 8   RNLF-----KIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQISLQ 62

Query: 72  LWDIGGQPRFRSMWERYCRGVNAIVFMVD---AADQGKLEAAKSELIQLLDKPQLEAIPF 128
           +WD  G  RF S    + RG +  + + D   A     LE  + E I   +    E+ P+
Sbjct: 63  IWDTAGHERFASFGTAFYRGADVCMLVCDVTVAESFEHLEVWRKEFISGGNPSDPESFPY 122
>M.Javanica_Scaff1604g016984 on XP_652776  Rab11B  (Establishment)  [Entamoeba histolytica]
          Length = 211

 Score = 44.3 bits (103), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 7/102 (6%)

Query: 26  LTLVGLQGSGKTTFVNVIASGQFTEDMIPTVG--FNMRKIT--KGNVTIKLWDIGGQPRF 81
           + LVG  G GK+  +      +F  D   T+G  F  R I     N+  ++WD  GQ R+
Sbjct: 13  IVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIWDTAGQERY 72

Query: 82  RSMWERYCRGVNAIVFMVDAADQGKLEAAK---SELIQLLDK 120
           R++   Y RG    + + D   +   E+ +   +EL +  DK
Sbjct: 73  RAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADK 114
>M.Javanica_Scaff1604g016984 on XP_649196  Rab7A  (Establishment)  [Entamoeba histolytica]
          Length = 206

 Score = 42.7 bits (99), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 24  MELTLVGLQGSGKTTFVNVIASGQFTEDMIPTVGFNMRK----ITKGNVTIKLWDIGGQP 79
           +++ ++G  G GKT+ +N   + +++     T+G +       +    VT+++WD  G  
Sbjct: 8   LKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIWDTAGNE 67

Query: 80  RFRSMWERYCRGVNAIVFMVDAADQGKLEA 109
           RF+S+   + RG +      D  D    E+
Sbjct: 68  RFQSLGVAFYRGADCCALCYDVNDPKTFES 97
>M.Javanica_Scaff1604g016984 on BAB40673  Rab5  (Establishment)  [Entamoeba histolytica]
          Length = 195

 Score = 40.0 bits (92), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 5/94 (5%)

Query: 23  EMELTLVGLQGSGKTTFVNVIASGQFTEDMIPTVG--FNMRKITKGNVTIK--LWDIGGQ 78
           + ++ L+G    GK++ V  +   ++ E    T+G  F  + +     TIK  +WD  GQ
Sbjct: 8   QFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGETIKFEIWDTAGQ 67

Query: 79  PRFRSMWERYCRGVNAIVFMVD-AADQGKLEAAK 111
            R+ S+   Y RG NA + + D  +D   ++A K
Sbjct: 68  ERYHSLTPMYYRGSNAALVVYDITSDSSFIQAKK 101
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1309g014655
         (227 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15441g072328
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1588g016855
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff155g002722
         (713 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13469g067419
         (230 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13035g066300
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13753g068181
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13459g067388
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14608g070306
         (329 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15699g072962
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15005g071299
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13503g067500
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13020g066281
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13232g066838
         (200 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14g000377
         (413 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13305g067009
         (224 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1407g015437
         (113 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13730g068126
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15636g072800
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1408g015455
         (153 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15360g072147
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16004g073634
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15707g072980
         (320 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff143g002542
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13373g067183
         (234 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1304g014609
         (237 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14370g069724
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13607g067789
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14432g069883
         (361 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16150g073941
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15041g071405
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12963g066137
         (351 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12927g066050
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1415g015503
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1501g016187
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1340g014891
         (452 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13072g066400
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13528g067568
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13337g067095
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15252g071901
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13117g066515
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14783g070769
         (87 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14538g070134
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14563g070194
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1397g015364
         (268 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14632g070363
         (167 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1458g015867
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1564g016677
         (397 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1424g015574
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15520g072543
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15901g073402
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14985g071257
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1538g016472
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14347g069673
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15623g072771
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15056g071439
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13160g066628
         (176 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15934g073469
         (615 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1567g016705
         (156 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15226g071834
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13460g067392
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14696g070529
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15320g072050
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14638g070377
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14565g070202
         (113 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14265g069461
         (676 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAW71459  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          51   2e-07
AAW71463  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]          51   2e-07
>M.Javanica_Scaff14265g069461 on AAW71459  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/337 (23%), Positives = 136/337 (40%), Gaps = 42/337 (12%)

Query: 49  FGVIPIGTPPKNFTLALNLQSSAFWVVDNNADFPWTKTK--YNNNTSKFSIPTGRNVTYT 106
           +G   IGT  + F    +  S+  WV   N D     TK  Y+ + SK     G  V  +
Sbjct: 138 YGEGQIGTNKQPFMFIFDTGSANLWVPSVNCDSIGCSTKHLYDASASKSYEKDGTKVEIS 197

Query: 107 DGKS---GPMFMDNITIGDLRLPVMRVVSIISYPRMPTEFQFTPLEGVFGLA---PPLKM 160
            G     G    D I++GDL LP  + + +     +   +  +  +G+ GL      +  
Sbjct: 198 YGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIYSGSEFDGILGLGWKDLSIGS 256

Query: 161 IDPCKASPLVSIMSVVDHPIVTITQYSVSVGDPNVGKLTFGAENYDDCVDEYDYVPLAKE 220
           IDP      +   + +D+ + T   + + V D +VG LT G    D       Y  L  +
Sbjct: 257 IDPVVVE--LKKQNKIDNALFT---FYLPVHDKHVGYLTIGGIESDFYEGPLTYEKLNHD 311

Query: 221 GQWSVKILSVKVDDSKLNITLSPMLKIMDQAL-YMYGPKAQLDELAKMLGAV-VPDDVGD 278
             W + +     D       +     ++D     +  P + L++  + +  + VP     
Sbjct: 312 LYWQIDL-----DIHFGKYVMQKANAVVDSGTSTITAPTSFLNKFFRDMNVIKVP----- 361

Query: 279 FYLLNQTACDNMDEMPKITLRFGEEGKDTSKTVLKPEHYMEVSPIGE-----CRLLFMTN 333
           F  L  T CDN D++P  TL F       +K  L+PE YM+  P+ +     C L  +  
Sbjct: 362 FLPLYVTTCDN-DDLP--TLEFHSR---NNKYTLEPEFYMD--PLSDIDPALCMLYILPV 413

Query: 334 EVMQYDNDYWVMGQQFLVNRCVSVHFRKGRMGFAQGR 370
           ++   D++ +++G  F+        + K  +GFA  +
Sbjct: 414 DI---DDNTFILGDPFMRKYFTVFDYEKESVGFAVAK 447
>M.Javanica_Scaff14265g069461 on AAW71463  Plasmepsin IV  (Proteases)  [Plasmodium falciparum]
          Length = 448

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/337 (23%), Positives = 136/337 (40%), Gaps = 42/337 (12%)

Query: 49  FGVIPIGTPPKNFTLALNLQSSAFWVVDNNADFPWTKTK--YNNNTSKFSIPTGRNVTYT 106
           +G   IGT  + F    +  S+  WV   N D     TK  Y+ + SK     G  V  +
Sbjct: 138 YGEGQIGTNKQPFMFIFDTGSANLWVPSVNCDSIGCSTKHLYDASASKSYEKDGTKVEIS 197

Query: 107 DGKS---GPMFMDNITIGDLRLPVMRVVSIISYPRMPTEFQFTPLEGVFGLA---PPLKM 160
            G     G    D I++GDL LP  + + +     +   +  +  +G+ GL      +  
Sbjct: 198 YGSGTVRGYFSKDVISLGDLSLP-YKFIEVTDADDLEPIYSGSEFDGILGLGWKDLSIGS 256

Query: 161 IDPCKASPLVSIMSVVDHPIVTITQYSVSVGDPNVGKLTFGAENYDDCVDEYDYVPLAKE 220
           IDP      +   + +D+ + T   + + V D +VG LT G    D       Y  L  +
Sbjct: 257 IDPVVVE--LKKQNKIDNALFT---FYLPVHDKHVGYLTIGGIESDFYEGPLTYEKLNHD 311

Query: 221 GQWSVKILSVKVDDSKLNITLSPMLKIMDQAL-YMYGPKAQLDELAKMLGAV-VPDDVGD 278
             W + +     D       +     ++D     +  P + L++  + +  + VP     
Sbjct: 312 LYWQIDL-----DIHFGKYVMQKANAVVDSGTSTITAPTSFLNKFFRDMNVIKVP----- 361

Query: 279 FYLLNQTACDNMDEMPKITLRFGEEGKDTSKTVLKPEHYMEVSPIGE-----CRLLFMTN 333
           F  L  T CDN D++P  TL F       +K  L+PE YM+  P+ +     C L  +  
Sbjct: 362 FLPLYVTTCDN-DDLP--TLEFHSR---NNKYTLEPEFYMD--PLSDIDPALCMLYILPV 413

Query: 334 EVMQYDNDYWVMGQQFLVNRCVSVHFRKGRMGFAQGR 370
           ++   D++ +++G  F+        + K  +GFA  +
Sbjct: 414 DI---DDNTFILGDPFMRKYFTVFDYEKESVGFAVAK 447
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1572g016742
         (120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1567g016700
         (168 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14677g070471
         (338 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14361g069708
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15886g073374
         (249 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14790g070787
         (129 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16060g073763
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16146g073935
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13259g066899
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14240g069384
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1572g016749
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1516g016295
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14403g069808
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14432g069884
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14355g069692
         (128 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff137g002458
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13358g067142
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13952g068681
         (165 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1390g015299
         (577 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14830g070886
         (181 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13889g068525
         (165 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14154g069172
         (614 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14397g069794
         (135 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14554g070173
         (153 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13429g067318
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff155g002723
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1526g016377
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16009g073646
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15366g072165
         (473 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1591g016887
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13700g068043
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13667g067956
         (717 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]        82   2e-18
AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]            81   5e-18
AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]             81   5e-18
CAA87086  Hsp70  (Heat shock protein)  [Eimeria tenella]               71   2e-14
>M.Javanica_Scaff13667g067956 on AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]
          Length = 255

 Score = 82.4 bits (202), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 127/299 (42%), Gaps = 53/299 (17%)

Query: 42  METILNRESQRKTPFALTIRNDERFFGDEALKKAISAPKQTFLFFLDLVGKPFEDPAISD 101
           ++ + N +  R TP  +     ER  GD A  +    P+ T      L+G+ F+D A+  
Sbjct: 4   VDIVPNDQGNRTTPSYVAFTETERLIGDAAKNQVARNPENTVFDAKRLIGRKFDDQAVQS 63

Query: 102 YQKRFPHLVLK--KNEQRGSVDFVTDAGQLPIETLLAMVLTNARAEVEAYAGNPVKDAVI 159
               +P  V++  K++   SV+++ +  +   E + AMVL   +   EAY G  +K+AV+
Sbjct: 64  DMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEISAMVLQKMKEISEAYLGRQIKNAVV 123

Query: 160 AIPGFFGISXXXXXXXXXXXXGINLIRLLSAGASAALNYGVFHFKDITDQPST----YLI 215
            +P +F  S            G+N++R+++   +AA+ YG+       D+  T     LI
Sbjct: 124 TVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGL-------DKKGTGERNVLI 176

Query: 216 YDVGSTKVQSTLVRLQLYNESLQIPAQXXXXXXXXXXXXXXXXXXXXXXXSGEPQPRLEV 275
           +D+G      +L+ ++                                          EV
Sbjct: 177 FDLGGGTFDVSLLTIE--------------------------------------DGIFEV 198

Query: 276 VGHGFDANLGGLHLTLKVRDYLIQQFRKQHSNLKDDIAENPQAMAKLLKEAGKVKQVLS 334
                D +LGG     ++ ++ +Q F++++  +  D+  N +A+ +L  +  + K+ LS
Sbjct: 199 KATAGDTHLGGEDFDNRLVEFCVQDFKRKNRGM--DLTSNARALRRLRTQCERAKRTLS 255
>M.Javanica_Scaff13667g067956 on AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 80.9 bits (198), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 8/214 (3%)

Query: 21  AMSIDLGVEFMKMALVKPGVPMETILNRESQRKTPFALTIRNDERFFGDEALKKAISAPK 80
           A+ IDLG  +  + + K    +E I N +  R TP  +   + ER  GD A  +    P+
Sbjct: 6   AVGIDLGTTYSCVGVWKNDA-VEIIANDQGNRTTPSYVAFTDTERLVGDAAKNQVARNPE 64

Query: 81  QTFLFFLDLVGKPFEDPAISDYQKRFPHLVLKKNEQRGSVDFVTDAGQ---LPIETLLAM 137
            T      L+G+ F+DP++    K +P  V+     +  ++ VT  G+      E + AM
Sbjct: 65  NTIFDAKRLIGRKFDDPSVQSDMKHWPFKVIAGPGDKPLIE-VTYQGEKKTFHPEEVSAM 123

Query: 138 VLTNARAEVEAYAGNPVKDAVIAIPGFFGISXXXXXXXXXXXXGINLIRLLSAGASAALN 197
           VL   +   EAY G  VK+AVI +P +F  S            G++++R+++   +AA+ 
Sbjct: 124 VLGKMKEIAEAYLGKEVKEAVITVPAYFNDSQRQATKDAGTIAGLSVLRIINEPTAAAIA 183

Query: 198 YGVFHFKDITDQPSTYLIYDVGSTKVQSTLVRLQ 231
           YG+   K   +     LI+D+G      +L+ ++
Sbjct: 184 YGL-DKKGCGEM--NVLIFDMGGGTFDVSLLTIE 214
>M.Javanica_Scaff13667g067956 on AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 80.9 bits (198), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 8/214 (3%)

Query: 21  AMSIDLGVEFMKMALVKPGVPMETILNRESQRKTPFALTIRNDERFFGDEALKKAISAPK 80
           A+ IDLG  +  + + K    +E I N +  R TP  +   + ER  GD A  +    P+
Sbjct: 6   AVGIDLGTTYSCVGVWKNDA-VEIIANDQGNRTTPSYVAFTDTERLVGDAAKNQVARNPE 64

Query: 81  QTFLFFLDLVGKPFEDPAISDYQKRFPHLVLKKNEQRGSVDFVTDAGQ---LPIETLLAM 137
            T      L+G+ F+DP++    K +P  V+     +  ++ VT  G+      E + AM
Sbjct: 65  NTIFDAKRLIGRKFDDPSVQSDMKHWPFKVIAGPGDKPLIE-VTYQGEKKTFHPEEVSAM 123

Query: 138 VLTNARAEVEAYAGNPVKDAVIAIPGFFGISXXXXXXXXXXXXGINLIRLLSAGASAALN 197
           VL   +   EAY G  VK+AVI +P +F  S            G++++R+++   +AA+ 
Sbjct: 124 VLGKMKEIAEAYLGKEVKEAVITVPAYFNDSQRQATKDAGTIAGLSVLRIINEPTAAAIA 183

Query: 198 YGVFHFKDITDQPSTYLIYDVGSTKVQSTLVRLQ 231
           YG+   K   +     LI+D+G      +L+ ++
Sbjct: 184 YGL-DKKGCGEM--NVLIFDMGGGTFDVSLLTIE 214
>M.Javanica_Scaff13667g067956 on CAA87086  Hsp70  (Heat shock protein)  [Eimeria tenella]
          Length = 255

 Score = 70.9 bits (172), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 9/200 (4%)

Query: 22  MSIDLGVEFMKMALVKPGVPMETILNRESQRKTPFALTIRND-ERFFGDEALKKAISAPK 80
           + IDLG     +A+++   P + + N E  R TP  +    D +R  G  A ++AI+ P+
Sbjct: 60  VGIDLGTTNSCVAVMEGSQP-KVLENSEGMRTTPSVVAFTKDGQRLVGVVAKRQAITNPE 118

Query: 81  QTFLFFLDLVGKPFEDPAISDYQKRFPHLVLKKNEQRGSVDFVTDAGQLPIETLLAMVLT 140
            TF     L+G+ F++ AI+  +K  P+ V++ +     V+      +     + A VL 
Sbjct: 119 NTFFSTKRLIGRSFDEEAIAKERKILPYKVIRADNGDAWVEGWGK--KYSPSQIGAFVLM 176

Query: 141 NARAEVEAYAGNPVKDAVIAIPGFFGISXXXXXXXXXXXXGINLIRLLSAGASAALNYGV 200
             +   E+Y G  V  AVI +P +F  S            G++++R+++   +AAL YG+
Sbjct: 177 KMKETAESYLGRDVNQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAAALAYGM 236

Query: 201 FHFKDITDQPSTYLIYDVGS 220
                  +   T  +YD+G 
Sbjct: 237 EK-----EDGRTIAVYDLGG 251
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15207g071787
         (404 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15469g072403
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15453g072361
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14877g070993
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14170g069212
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15617g072757
         (282 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14641g070386
         (212 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1308g014651
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1390g015305
         (415 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14671g070452
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15903g073406
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1434g015658
         (272 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13205g066771
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12988g066200
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13178g066693
         (233 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15890g073382
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14954g071179
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1405g015422
         (161 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15945g073489
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1540g016493
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1614g017060
         (233 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14111g069072
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff133g002400
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14061g068951
         (144 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14447g069918
         (223 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15048g071417
         (255 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15522g072552
         (243 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1293g014508
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1500g016175
         (298 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13314g067031
         (247 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1470g015956
         (467 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff12965g066145
         (275 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15226g071833
         (565 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13321g067044
         (254 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13108g066491
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13654g067915
         (348 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15181g071731
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15651g072836
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13754g068186
         (178 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13409g067268
         (155 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1390g015303
         (199 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15734g073037
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14960g071193
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15916g073436
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13307g067015
         (390 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1550g016572
         (136 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13748g068171
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13480g067453
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15918g073440
         (187 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15325g072063
         (281 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13645g067890
         (144 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13267g066916
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1472g015972
         (226 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14088g069013
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14068g068971
         (248 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15612g072748
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1456g015849
         (284 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14233g069370
         (258 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14293g069534
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15023g071348
         (87 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1547g016553
         (265 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1494g016132
         (213 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14874g070983
         (208 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1449g015796
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14313g069580
         (430 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15444g072338
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1456g015848
         (266 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15363g072153
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1328g014799
         (419 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13923g068614
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13609g067796
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15335g072088
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13523g067556
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1335g014851
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1302g014596
         (328 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13364g067162
         (144 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14996g071283
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13763g068215
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1369g015127
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1508g016235
         (252 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15072g071474
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1307g014641
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14474g069983
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1434g015662
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15335g072089
         (360 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16123g073885
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff13172g066668
         (181 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1575g016769
         (592 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15586g072687
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1437g015692
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1568g016719
         (216 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff152g002676
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]            54   2e-11
AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]             54   2e-11
>M.Javanica_Scaff152g002676 on AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 54.3 bits (129), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/28 (85%), Positives = 26/28 (92%)

Query: 45 IGIDLGTTYSCVGVYKNGRVEIIANDQG 72
          +GIDLGTTYSCVGV+KN  VEIIANDQG
Sbjct: 7  VGIDLGTTYSCVGVWKNDAVEIIANDQG 34
>M.Javanica_Scaff152g002676 on AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 54.3 bits (129), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/28 (85%), Positives = 26/28 (92%)

Query: 45 IGIDLGTTYSCVGVYKNGRVEIIANDQG 72
          +GIDLGTTYSCVGV+KN  VEIIANDQG
Sbjct: 7  VGIDLGTTYSCVGVWKNDAVEIIANDQG 34
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15196g071768
         (59 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14609g070308
         (713 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14639g070379
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16008g073643
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14750g070677
         (328 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff153g002695
         (619 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1591g016888
         (168 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15g000382
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16187g074011
         (306 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14956g071182
         (568 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14992g071274
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14358g069698
         (249 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14289g069521
         (320 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff156g002730
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14864g070959
         (308 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15392g072217
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14606g070300
         (163 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff155g002727
         (722 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14559g070184
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff149g002616
         (136 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff15431g072305
         (1170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff14652g070404
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20670g083097
         (255 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20360g082529
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1755g018127
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19611g081141
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22660g086521
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24923g090097
         (257 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22150g085668
         (173 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1903g019213
         (197 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2205g021374
         (491 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17018g075813
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff170g002911
         (417 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2343g022292
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16663g075076
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19219g080358
         (409 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1828g018667
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24271g089096
         (295 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17517g076854
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16373g074442
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19103g080132
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19719g081341
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23692g088193
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2345g022306
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17885g077620
         (442 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1704g017741
         (113 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1627g017149
         (354 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16415g074526
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22436g086143
         (144 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1629g017168
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18820g079535
         (169 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2089g020559
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23926g088542
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24036g088709
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1722g017847
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20038g081928
         (286 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]           301   e-104
AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]            301   e-104
AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]       261   1e-88
CAA87086  Hsp70  (Heat shock protein)  [Eimeria tenella]              216   9e-71
>M.Javanica_Scaff20038g081928 on AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score =  301 bits (771), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 157/236 (66%), Positives = 175/236 (74%), Gaps = 33/236 (13%)

Query: 47  IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLNPEN 106
           +GIDLGTTYSCVGV+KN  VEIIANDQGNR TPSYVAFT+  ERL+GDAAKNQ+  NPEN
Sbjct: 7   VGIDLGTTYSCVGVWKNDAVEIIANDQGNRTTPSYVAFTDT-ERLVGDAAKNQVARNPEN 65

Query: 107 TIFDAKRLIGREFTDKTVQDDMKLWPFGV-ADKSNKPHIKANVNGEIKQFAPEEISAMVL 165
           TIFDAKRLIGR+F D +VQ DMK WPF V A   +KP I+    GE K F PEE+SAMVL
Sbjct: 66  TIFDAKRLIGRKFDDPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEEVSAMVL 125

Query: 166 GKMKEIAEAYLGHEVTHAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIAYG 225
           GKMKEIAEAYLG EV  AV+TVPAYFND+QRQATKDAGTI+GL+V+RIINEPTAAAIAYG
Sbjct: 126 GKMKEIAEAYLGKEVKEAVITVPAYFNDSQRQATKDAGTIAGLSVLRIINEPTAAAIAYG 185

Query: 226 LDKKEAYIIRSYTRLNVVRIINEPTAAAIAYGLDKKEGERNILVFDLGGGTFDVSL 281
           LDKK                                 GE N+L+FD+GGGTFDVSL
Sbjct: 186 LDKKGC-------------------------------GEMNVLIFDMGGGTFDVSL 210
>M.Javanica_Scaff20038g081928 on AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score =  301 bits (771), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 157/236 (66%), Positives = 175/236 (74%), Gaps = 33/236 (13%)

Query: 47  IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLNPEN 106
           +GIDLGTTYSCVGV+KN  VEIIANDQGNR TPSYVAFT+  ERL+GDAAKNQ+  NPEN
Sbjct: 7   VGIDLGTTYSCVGVWKNDAVEIIANDQGNRTTPSYVAFTDT-ERLVGDAAKNQVARNPEN 65

Query: 107 TIFDAKRLIGREFTDKTVQDDMKLWPFGV-ADKSNKPHIKANVNGEIKQFAPEEISAMVL 165
           TIFDAKRLIGR+F D +VQ DMK WPF V A   +KP I+    GE K F PEE+SAMVL
Sbjct: 66  TIFDAKRLIGRKFDDPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEEVSAMVL 125

Query: 166 GKMKEIAEAYLGHEVTHAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIAYG 225
           GKMKEIAEAYLG EV  AV+TVPAYFND+QRQATKDAGTI+GL+V+RIINEPTAAAIAYG
Sbjct: 126 GKMKEIAEAYLGKEVKEAVITVPAYFNDSQRQATKDAGTIAGLSVLRIINEPTAAAIAYG 185

Query: 226 LDKKEAYIIRSYTRLNVVRIINEPTAAAIAYGLDKKEGERNILVFDLGGGTFDVSL 281
           LDKK                                 GE N+L+FD+GGGTFDVSL
Sbjct: 186 LDKKGC-------------------------------GEMNVLIFDMGGGTFDVSL 210
>M.Javanica_Scaff20038g081928 on AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]
          Length = 255

 Score =  261 bits (668), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 139/220 (63%), Positives = 156/220 (70%), Gaps = 33/220 (15%)

Query: 63  NGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLNPENTIFDAKRLIGREFTDK 122
           N  V+I+ NDQGNR TPSYVAFTE  ERLIGDAAKNQ+  NPENT+FDAKRLIGR+F D+
Sbjct: 1   NDTVDIVPNDQGNRTTPSYVAFTET-ERLIGDAAKNQVARNPENTVFDAKRLIGRKFDDQ 59

Query: 123 TVQDDMKLWPFGVAD-KSNKPHIKANVNGEIKQFAPEEISAMVLGKMKEIAEAYLGHEVT 181
            VQ DM  WPF V     +KP I  N  GE K+F  EEISAMVL KMKEI+EAYLG ++ 
Sbjct: 60  AVQSDMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEISAMVLQKMKEISEAYLGRQIK 119

Query: 182 HAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIAYGLDKKEAYIIRSYTRLN 241
           +AVVTVPAYFND+QRQATKDAG I+GLNV+RIINEPTAAAIAYGLDKK            
Sbjct: 120 NAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKGT---------- 169

Query: 242 VVRIINEPTAAAIAYGLDKKEGERNILVFDLGGGTFDVSL 281
                                GERN+L+FDLGGGTFDVSL
Sbjct: 170 ---------------------GERNVLIFDLGGGTFDVSL 188
>M.Javanica_Scaff20038g081928 on CAA87086  Hsp70  (Heat shock protein)  [Eimeria tenella]
          Length = 255

 Score =  216 bits (549), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 113/235 (48%), Positives = 148/235 (62%), Gaps = 36/235 (15%)

Query: 44  GTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLN 103
           G ++GIDLGTT SCV V +  + +++ N +G R TPS VAFT++G+RL+G  AK Q   N
Sbjct: 57  GDVVGIDLGTTNSCVAVMEGSQPKVLENSEGMRTTPSVVAFTKDGQRLVGVVAKRQAITN 116

Query: 104 PENTIFDAKRLIGREFTDKTVQDDMKLWPFGVADKSNKPHIKANVNGEIKQFAPEEISAM 163
           PENT F  KRLIGR F ++ +  + K+ P+ V    N     A V G  K+++P +I A 
Sbjct: 117 PENTFFSTKRLIGRSFDEEAIAKERKILPYKVIRADNG---DAWVEGWGKKYSPSQIGAF 173

Query: 164 VLGKMKEIAEAYLGHEVTHAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIA 223
           VL KMKE AE+YLG +V  AV+TVPAYFND+QRQATKDAG I+GL+V+RIINEPTAAA+A
Sbjct: 174 VLMKMKETAESYLGRDVNQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAAALA 233

Query: 224 YGLDKKEAYIIRSYTRLNVVRIINEPTAAAIAYGLDKKEGERNILVFDLGGGTFD 278
           YG++K++                                  R I V+DLGGGTFD
Sbjct: 234 YGMEKEDG---------------------------------RTIAVYDLGGGTFD 255
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2094g020596
         (376 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17673g077185
         (188 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21203g084053
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21086g083853
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16310g074309
         (261 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2316g022122
         (195 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19615g081144
         (152 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff194g003247
         (322 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19547g081002
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2499g023357
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff242g003894
         (1610 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20640g083041
         (146 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18424g078748
         (214 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23784g088340
         (166 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19222g080362
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22626g086472
         (131 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff188g003170
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24953g090140
         (340 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20704g083168
         (97 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1626g017143
         (199 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19158g080251
         (273 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2116g020778
         (336 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17592g077026
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18538g078976
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2329g022195
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19364g080635
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]            51   2e-10
AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]             51   2e-10
>M.Javanica_Scaff19364g080635 on AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 51.2 bits (121), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/28 (82%), Positives = 25/28 (89%)

Query: 45 IGIDLGTTYSCVGVYINGRVEIIANDQG 72
          +GIDLGTTYSCVGV+ N  VEIIANDQG
Sbjct: 7  VGIDLGTTYSCVGVWKNDAVEIIANDQG 34
>M.Javanica_Scaff19364g080635 on AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 51.2 bits (121), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/28 (82%), Positives = 25/28 (89%)

Query: 45 IGIDLGTTYSCVGVYINGRVEIIANDQG 72
          +GIDLGTTYSCVGV+ N  VEIIANDQG
Sbjct: 7  VGIDLGTTYSCVGVWKNDAVEIIANDQG 34
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1816g018563
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2271g021805
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19803g081511
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff197g003281
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2439g022945
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21069g083826
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1828g018668
         (297 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2201g021335
         (253 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24320g089165
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1624g017131
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2330g022204
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2285g021903
         (195 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23356g087647
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18543g078988
         (199 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18235g078346
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21426g084427
         (189 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1936g019448
         (266 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24875g090021
         (321 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16221g074092
         (121 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18264g078413
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1686g017619
         (1031 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2388g022585
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24024g088691
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2138g020929
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2209g021398
         (131 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18206g078279
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20101g082049
         (457 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2242g021626
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2335g022230
         (549 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1932g019416
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17738g077321
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21048g083790
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18615g079135
         (207 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19216g080351
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18218g078308
         (165 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16588g074914
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23292g087560
         (175 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16952g075683
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff227g003691
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2204g021369
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19811g081527
         (300 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1972g019717
         (188 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1904g019220
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21270g084173
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1909g019266
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1939g019480
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19727g081358
         (345 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18g000441
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17032g075840
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18746g079388
         (168 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19348g080604
         (317 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20745g083228
         (318 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1836g018727
         (213 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2225g021506
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1947g019548
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18494g078902
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18582g079072
         (184 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2065g020382
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff223g003625
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16604g074945
         (180 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22683g086566
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19783g081472
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2016g020031
         (200 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2329g022194
         (293 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19413g080730
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2204g021364
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2235g021575
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16703g075164
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16738g075236
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18734g079358
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23559g087990
         (256 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1874g018989
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16772g075311
         (280 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2199g021318
         (181 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2096g020614
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24708g089776
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17866g077576
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21625g084779
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23279g087538
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2375g022509
         (380 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16796g075356
         (299 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16736g075232
         (197 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22438g086147
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19035g079991
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21582g084697
         (419 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16542g074815
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17205g076216
         (159 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2328g022186
         (204 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19319g080541
         (264 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19262g080438
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1737g017962
         (188 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17648g077139
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1939g019471
         (195 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21490g084533
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2040g020217
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2325g022166
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18400g078705
         (212 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2015g020024
         (185 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1849g018821
         (292 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16301g074283
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23352g087642
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16261g074187
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20348g082506
         (135 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19527g080965
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17975g077816
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16382g074461
         (252 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19990g081852
         (218 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22888g086897
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18542g078987
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17113g076008
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19980g081829
         (189 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19961g081792
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22157g085676
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21587g084705
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2019g020060
         (153 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22190g085727
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20386g082580
         (59 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16231g074115
         (165 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19567g081046
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2105g020689
         (185 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19574g081061
         (311 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21830g085130
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22757g086692
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22835g086808
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20671g083100
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1939g019472
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2294g021970
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22749g086677
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]           249   4e-85
AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]            249   4e-85
AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]       218   5e-73
CAA87086  Hsp70  (Heat shock protein)  [Eimeria tenella]              148   2e-45
>M.Javanica_Scaff22749g086677 on AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score =  249 bits (636), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 125/170 (73%), Positives = 141/170 (82%), Gaps = 3/170 (1%)

Query: 34  TCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPANTVFDAKRLIG 93
           +CVGV+++  VEIIANDQGNRTTPSYVAFTDTERL+GDAAKNQVA NP NT+FDAKRLIG
Sbjct: 16  SCVGVWKNDAVEIIANDQGNRTTPSYVAFTDTERLVGDAAKNQVARNPENTIFDAKRLIG 75

Query: 94  RKFDDPAVQSDMKHWPFKVIQGEGARPKIQVEVKGEMKAFFPEEVSAMVLTKMKETAEAF 153
           RKFDDP+VQSDMKHWPFKVI G G +P I+V  +GE K F PEEVSAMVL KMKE AEA+
Sbjct: 76  RKFDDPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEEVSAMVLGKMKEIAEAY 135

Query: 154 LGQTVKDAVITVPAYFNVDAKPQRMLE--QFLDLMFLRIINEPTAAAIAY 201
           LG+ VK+AVITVPAYFN D++ Q   +      L  LRIINEPTAAAIAY
Sbjct: 136 LGKEVKEAVITVPAYFN-DSQRQATKDAGTIAGLSVLRIINEPTAAAIAY 184
>M.Javanica_Scaff22749g086677 on AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score =  249 bits (636), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 125/170 (73%), Positives = 141/170 (82%), Gaps = 3/170 (1%)

Query: 34  TCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPANTVFDAKRLIG 93
           +CVGV+++  VEIIANDQGNRTTPSYVAFTDTERL+GDAAKNQVA NP NT+FDAKRLIG
Sbjct: 16  SCVGVWKNDAVEIIANDQGNRTTPSYVAFTDTERLVGDAAKNQVARNPENTIFDAKRLIG 75

Query: 94  RKFDDPAVQSDMKHWPFKVIQGEGARPKIQVEVKGEMKAFFPEEVSAMVLTKMKETAEAF 153
           RKFDDP+VQSDMKHWPFKVI G G +P I+V  +GE K F PEEVSAMVL KMKE AEA+
Sbjct: 76  RKFDDPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEEVSAMVLGKMKEIAEAY 135

Query: 154 LGQTVKDAVITVPAYFNVDAKPQRMLE--QFLDLMFLRIINEPTAAAIAY 201
           LG+ VK+AVITVPAYFN D++ Q   +      L  LRIINEPTAAAIAY
Sbjct: 136 LGKEVKEAVITVPAYFN-DSQRQATKDAGTIAGLSVLRIINEPTAAAIAY 184
>M.Javanica_Scaff22749g086677 on AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]
          Length = 255

 Score =  218 bits (556), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 110/160 (68%), Positives = 127/160 (79%), Gaps = 3/160 (1%)

Query: 44  VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPANTVFDAKRLIGRKFDDPAVQS 103
           V+I+ NDQGNRTTPSYVAFT+TERLIGDAAKNQVA NP NTVFDAKRLIGRKFDD AVQS
Sbjct: 4   VDIVPNDQGNRTTPSYVAFTETERLIGDAAKNQVARNPENTVFDAKRLIGRKFDDQAVQS 63

Query: 104 DMKHWPFKVIQGEGARPKIQVEVKGEMKAFFPEEVSAMVLTKMKETAEAFLGQTVKDAVI 163
           DM HWPFKV++G   +P I V   GE K F  EE+SAMVL KMKE +EA+LG+ +K+AV+
Sbjct: 64  DMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEISAMVLQKMKEISEAYLGRQIKNAVV 123

Query: 164 TVPAYFNVDAKPQRMLE--QFLDLMFLRIINEPTAAAIAY 201
           TVPAYFN D++ Q   +      L  +RIINEPTAAAIAY
Sbjct: 124 TVPAYFN-DSQRQATKDAGAIAGLNVMRIINEPTAAAIAY 162
>M.Javanica_Scaff22749g086677 on CAA87086  Hsp70  (Heat shock protein)  [Eimeria tenella]
          Length = 255

 Score =  148 bits (373), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 83/171 (48%), Positives = 110/171 (64%), Gaps = 8/171 (4%)

Query: 34  TCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPANTVFDAKRLI 92
           +CV V +  + +++ N +G RTTPS VAFT D +RL+G  AK Q   NP NT F  KRLI
Sbjct: 69  SCVAVMEGSQPKVLENSEGMRTTPSVVAFTKDGQRLVGVVAKRQAITNPENTFFSTKRLI 128

Query: 93  GRKFDDPAVQSDMKHWPFKVIQGEGARPKIQVEVKGEMKAFFPEEVSAMVLTKMKETAEA 152
           GR FD+ A+  + K  P+KVI+ +         V+G  K + P ++ A VL KMKETAE+
Sbjct: 129 GRSFDEEAIAKERKILPYKVIRADNG----DAWVEGWGKKYSPSQIGAFVLMKMKETAES 184

Query: 153 FLGQTVKDAVITVPAYFNVDAKPQRMLE--QFLDLMFLRIINEPTAAAIAY 201
           +LG+ V  AVITVPAYFN D++ Q   +  +   L  LRIINEPTAAA+AY
Sbjct: 185 YLGRDVNQAVITVPAYFN-DSQRQATKDAGKIAGLDVLRIINEPTAAALAY 234
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19092g080109
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20280g082379
         (483 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18647g079199
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20496g082775
         (199 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff25008g090220
         (144 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18945g079795
         (274 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20855g083433
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23812g088373
         (189 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18553g079010
         (242 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2234g021567
         (405 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff163g002827
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18777g079453
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24749g089839
         (227 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1933g019431
         (229 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2422g022826
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2115g020771
         (194 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff180g003061
         (288 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16926g075629
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23092g087254
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff219g003583
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20332g082469
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22562g086375
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24088g088799
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24556g089534
         (394 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff209g003437
         (497 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19479g080869
         (246 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24517g089475
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16441g074600
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22764g086704
         (167 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21042g083778
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1722g017846
         (157 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2167g021115
         (195 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21002g083706
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1870g018959
         (161 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17067g075915
         (337 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1926g019389
         (469 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22386g086067
         (330 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21118g083905
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21798g085081
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19251g080419
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2451g023032
         (307 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23g000560
         (489 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21147g083957
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20222g082270
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2263g021756
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24144g088889
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19814g081535
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2107g020709
         (321 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]           83   5e-19
XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium falc...    82   2e-18
PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]    81   7e-18
AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    80   7e-18
XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]           76   8e-17
ABC02174  Falstatin  (Others)  [Plasmodium falciparum]                 76   2e-16
XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium falc...    76   2e-16
XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]           75   3e-16
AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]           69   3e-14
CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]        62   7e-12
P92132  CP2  (Cysteine protease)  [Giardia duodenalis]                 56   5e-10
CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]            54   2e-09
CAA54437  CP3  (Cysteine protease)  [Trichomonas vaginalis]            54   3e-09
AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]           52   9e-09
AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]            47   3e-07
>M.Javanica_Scaff2107g020709 on XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]
          Length = 318

 Score = 82.8 bits (203), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 115/244 (47%), Gaps = 31/244 (12%)

Query: 60  MRKEIKITPRLYELGHFDPLDLPETWDWRNVNGVNYVSADRNQHIPQYCGSCWAMGSTSA 119
           M K   I  +  E+ +    D+PE+ DWR       V A R+Q     CGSC++  S +A
Sbjct: 74  MLKPFVIDKQHEEIVYDSRGDVPESVDWR---AKGKVPAIRDQ---ASCGSCYSFASVAA 127

Query: 120 LADRINI--KRKNAWPPAYLSVQEVIDCA----NAGSCEGGDVGPVYEYAHKHGIPHETC 173
           +  R+ +   +K       LS Q+++DC+    N G C GG +   + Y   +GI  E  
Sbjct: 128 IEGRLLVAGSKKFTVDDLDLSEQQLVDCSVSVGNKG-CNGGSLLLSFRYVKLNGIMQEKD 186

Query: 174 NNYQAKDGQCDPYNRCGSCWPDRCFDIKNYTLYKVKEFGPVSGIIKMKAEIYKGGPI-AC 232
             Y A +  C         +  +   +K  T  K+   G    +++  AE      I A 
Sbjct: 187 YPYVAAEETC--------TYDKKKVAVK-ITGQKLVRPGSEKALMRAAAEGPVAAAIDAS 237

Query: 233 GIAATKKFDDYAGGIY--KEKTNEEINHIISVVGWGKDENSGISYWIGRNSWGTAWGENG 290
           G+    KF  Y  GIY  KE ++ ++NH ++VVG+G    +G  YWI RNSWGT WG+ G
Sbjct: 238 GV----KFQLYKSGIYNSKECSSTQLNHGVAVVGYGTQ--NGTEYWIVRNSWGTIWGDQG 291

Query: 291 WFRI 294
           +  +
Sbjct: 292 YVLM 295
>M.Javanica_Scaff2107g020709 on XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 482

 Score = 82.0 bits (201), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 103/231 (44%), Gaps = 45/231 (19%)

Query: 84  TWDWRNVNGVNYVSADRNQHIPQYCGSCWAMGSTSALADRINIKRKNAWPPAYLSVQEVI 143
            +DWR  +GV  V   +N      CGSCWA  S  ++  +  I RKN      LS QE++
Sbjct: 262 AYDWRLHSGVTPVKDQKN------CGSCWAFSSIGSVESQYAI-RKNKLIT--LSEQELV 312

Query: 144 DCA--NAGSCEGGDVGPVYEYAHKHGIPHETCNNYQAKDGQCD----PY--NRCGSCWPD 195
           DC+  N G C GG +   +E   + G             G C     PY  +    C  D
Sbjct: 313 DCSFKNYG-CNGGLINNAFEDMIELG-------------GICTDDDYPYVSDAPNLCNID 358

Query: 196 RCFDIKNYTLYKVKEFGPVSGIIKMKAEIYKGGPIACGIAATKKFDDYAGGIYKEKTNEE 255
           RC +      Y +K +  V    K+K  +   GPI+  IA +  F  Y  GI+  +  +E
Sbjct: 359 RCTE-----KYGIKNYLSVPDN-KLKEALRFLGPISISIAVSDDFPFYKEGIFDGECGDE 412

Query: 256 INHIISVVGWGKDE--------NSGISYWIGRNSWGTAWGENGWFRIVTSE 298
           +NH + +VG+G  E             Y+I +NSWG  WGE G+  I T E
Sbjct: 413 LNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDE 463
>M.Javanica_Scaff2107g020709 on PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]
          Length = 569

 Score = 80.9 bits (198), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 125/301 (41%), Gaps = 65/301 (21%)

Query: 40  KSSYAVGPHLRGCYRPAPEEMRKEIKITPRLYELGHFDPLDL----PETWDWRNVNGVNY 95
           K+   V  H+   Y    E   K+  +    Y  G  +  D+    PE  D+R   G+ +
Sbjct: 288 KTLLHVPNHMIEKYSKPFENHLKDNILISEFYTNGKRNEKDIFSKVPEILDYRE-KGIVH 346

Query: 96  VSADRNQHIPQYCGSCWAMGSTSALADRINIKRKNAWPPAYLSVQEVIDCA--NAGSCEG 153
              D+       CGSCWA  S   +      K KN       S QEV+DC+  N G C+G
Sbjct: 347 EPKDQG-----LCGSCWAFASVGNIESVFAKKNKNILS---FSEQEVVDCSKDNFG-CDG 397

Query: 154 GDVGPVYEYAHKHGIPHETCN----NYQAKDGQCDPYNRCGSCWPDRC-FDIKNYTLYKV 208
           G   P Y + +   + +E C      Y+AKD           C   RC   +   ++  V
Sbjct: 398 GH--PFYSFLY--VLQNELCLGDEYKYKAKDDMF--------CLNYRCKRKVSLSSIGAV 445

Query: 209 KEFGPVSGIIKMKAEIYKGGPIACGIAATKKFDDYAGGIYKEKTNEEINHIISVVGWGKD 268
           KE   +  + ++       GP++  +     F  Y+ G+Y    +EE+NH + +VG+G+ 
Sbjct: 446 KENQLILALNEV-------GPLSVNVGVNNDFVAYSEGVYNGTCSEELNHSVLLVGYGQV 498

Query: 269 ENSGIS-----------------------YWIGRNSWGTAWGENGWFRIVTSEYRNGGNK 305
           E + ++                       YWI +NSW   WGENG+ R+  S  +NG N 
Sbjct: 499 EKTKLNYNNKIQTYNTKENSNQPDDNIIYYWIIKNSWSKKWGENGFMRL--SRNKNGDNV 556

Query: 306 Y 306
           +
Sbjct: 557 F 557
>M.Javanica_Scaff2107g020709 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 80.5 bits (197), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 103/231 (44%), Gaps = 45/231 (19%)

Query: 84  TWDWRNVNGVNYVSADRNQHIPQYCGSCWAMGSTSALADRINIKRKNAWPPAYLSVQEVI 143
            +DWR  +GV  V   +N      CGSCWA  S  ++  +  I RKN      LS QE++
Sbjct: 264 AYDWRLHSGVTPVKDQKN------CGSCWAFSSIGSVESQYAI-RKNKLIT--LSEQELV 314

Query: 144 DCA--NAGSCEGGDVGPVYEYAHKHGIPHETCNNYQAKDGQCD----PY--NRCGSCWPD 195
           DC+  N G C GG +   +E   + G             G C     PY  +    C  D
Sbjct: 315 DCSFKNYG-CNGGLINNAFEDMIELG-------------GICTDDDYPYVSDAPNLCNID 360

Query: 196 RCFDIKNYTLYKVKEFGPVSGIIKMKAEIYKGGPIACGIAATKKFDDYAGGIYKEKTNEE 255
           RC +      Y +K +  V    K+K  +   GPI+  +A +  F  Y  GI+  +  ++
Sbjct: 361 RCTE-----KYGIKNYLSVPDN-KLKEALRFLGPISISVAVSDDFAFYKEGIFDGECGDQ 414

Query: 256 INHIISVVGWGKDE--------NSGISYWIGRNSWGTAWGENGWFRIVTSE 298
           +NH + +VG+G  E             Y+I +NSWG  WGE G+  I T E
Sbjct: 415 LNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDE 465
>M.Javanica_Scaff2107g020709 on XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 76.3 bits (186), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 106/255 (41%), Gaps = 46/255 (18%)

Query: 58  EEMRKEIKITPRLYELGHFDPLDL--PETWDWRNVNGVNYVSADRNQHIPQYCGSCWAMG 115
           EE R  +K      E G    L++  PE+ DWR    V  +   R+Q     CGSC+  G
Sbjct: 69  EEYRTLLKSKRTTEENGQVKYLNIQAPESVDWRKEGKVTPI---RDQ---AQCGSCYTFG 122

Query: 116 STSALADRINIKRKNAWPPAYLSVQEVIDCAN---AGSCEGGDVGPVYEYAHKHGIPHET 172
           S +AL  R+ I++        LS + ++ C        C GG    VY+Y  +HG+  E+
Sbjct: 123 SLAALEGRLLIEKGGDANTLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEHGVAKES 182

Query: 173 CNNYQAKDGQCDPYNRCGSCWPDRCFDIKNYTLYKVKEFGPVSGIIK--------MKAEI 224
              Y   D  C                        VK F  ++G  K        +KA +
Sbjct: 183 DYPYTGSDSTCKT---------------------NVKSFAKITGYTKVPRNNEAELKAAL 221

Query: 225 YKGGPIACGIAATKKFDDYAGGIYKEKTNE----EINHIISVVGWGKDENSGISYWIGRN 280
            +G       A++ KF  Y  G Y +   +     +NH +  VG+G  +  G   WI RN
Sbjct: 222 SQGLVDVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVD--GKECWIVRN 279

Query: 281 SWGTAWGENGWFRIV 295
           SWGT WG+ G+  +V
Sbjct: 280 SWGTGWGDKGYINMV 294
>M.Javanica_Scaff2107g020709 on ABC02174  Falstatin  (Others)  [Plasmodium falciparum]
          Length = 492

 Score = 76.3 bits (186), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 43/229 (18%)

Query: 85  WDWRNVNGVNYVSADRNQHIPQYCGSCWAMGSTSALADRINIKRKNAWPPAYLSVQEVID 144
           +DWR   GV  V   ++Q +   CGSCWA  S  ++  +  I++K  +     S QE++D
Sbjct: 273 YDWRLHGGVTPV---KDQAL---CGSCWAFSSVGSVESQYAIRKKALF---LFSEQELVD 323

Query: 145 CANAGS-CEGGDVGPVYEYAHKHGIPHETCNNYQAKDGQCD----PY--NRCGSCWPDRC 197
           C+   + C GG +   ++     G             G C     PY  N   +C   RC
Sbjct: 324 CSVKNNGCYGGYITNAFDDMIDLG-------------GLCSQDDYPYVSNLPETCNLKRC 370

Query: 198 FDIKNYTLYKVKEFGPVSGIIKMKAEIYKGGPIACGIAATKKFDDYAGGIYKEKTNEEIN 257
            +      Y +K +  +    K K  +   GPI+  IAA+  F  Y GG Y  +     N
Sbjct: 371 NE-----RYTIKSYVSIPDD-KFKEALRYLGPISISIAASDDFAFYRGGFYDGECGAAPN 424

Query: 258 HIISVVGWGK----DENSG----ISYWIGRNSWGTAWGENGWFRIVTSE 298
           H + +VG+G     +E++G      Y+I +NSWG+ WGE G+  + T E
Sbjct: 425 HAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDE 473
>M.Javanica_Scaff2107g020709 on XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 492

 Score = 76.3 bits (186), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 43/229 (18%)

Query: 85  WDWRNVNGVNYVSADRNQHIPQYCGSCWAMGSTSALADRINIKRKNAWPPAYLSVQEVID 144
           +DWR   GV  V   ++Q +   CGSCWA  S  ++  +  I++K  +     S QE++D
Sbjct: 273 YDWRLHGGVTPV---KDQAL---CGSCWAFSSVGSVESQYAIRKKALF---LFSEQELVD 323

Query: 145 CANAGS-CEGGDVGPVYEYAHKHGIPHETCNNYQAKDGQCD----PY--NRCGSCWPDRC 197
           C+   + C GG +   ++     G             G C     PY  N   +C   RC
Sbjct: 324 CSVKNNGCYGGYITNAFDDMIDLG-------------GLCSQDDYPYVSNLPETCNLKRC 370

Query: 198 FDIKNYTLYKVKEFGPVSGIIKMKAEIYKGGPIACGIAATKKFDDYAGGIYKEKTNEEIN 257
            +      Y +K +  +    K K  +   GPI+  IAA+  F  Y GG Y  +     N
Sbjct: 371 NE-----RYTIKSYVSIPDD-KFKEALRYLGPISISIAASDDFAFYRGGFYDGECGAAPN 424

Query: 258 HIISVVGWGK----DENSG----ISYWIGRNSWGTAWGENGWFRIVTSE 298
           H + +VG+G     +E++G      Y+I +NSWG+ WGE G+  + T E
Sbjct: 425 HAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDE 473
>M.Javanica_Scaff2107g020709 on XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 74.7 bits (182), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 108/249 (43%), Gaps = 34/249 (13%)

Query: 58  EEMRKEIKITPRLYELGHFDPLDL--PETWDWRNVNGVNYVSADRNQHIPQYCGSCWAMG 115
           EE    +K+     E G    L++  P+  DWR    V  +    N      CGSC+  G
Sbjct: 69  EEYNSLLKLKRSGEEKGEVRYLNIQAPKAVDWRKKGKVTPIRDQGN------CGSCYTFG 122

Query: 116 STSALADRINIKRKNAWPPAYLSVQEVIDCAN---AGSCEGGDVGPVYEYAHKHGIPHET 172
           S +AL  R+ I++        LS + ++ C        C GG    VY Y  ++GI  E+
Sbjct: 123 SIAALEGRLLIEKGGDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMENGIAKES 182

Query: 173 CNNYQAKDGQCDPYNRCGSCWPDRCFDIKNYTLYKVKEFGPVS--GIIKMKAEIYKGGPI 230
              Y   D  C               D+K +   K+K +  V+    +++KA I +G   
Sbjct: 183 DYPYTGSDSTCRS-------------DVKAFA--KIKSYNRVARNNEVELKAAISQGLVD 227

Query: 231 ACGIAATKKFDDYAGGIYKEKTNEE----INHIISVVGWGKDENSGISYWIGRNSWGTAW 286
               A++ +F  Y  G Y +K  +     +NH +  VG+G  +  G   WI RNSWGT W
Sbjct: 228 VSIDASSVQFQLYKSGAYTDKQCKNNYFALNHEVCAVGYGVVD--GKECWIVRNSWGTGW 285

Query: 287 GENGWFRIV 295
           GE G+  +V
Sbjct: 286 GEKGYINMV 294
>M.Javanica_Scaff2107g020709 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score = 68.9 bits (167), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 30/214 (14%)

Query: 104 IPQY-----CGSCWAMGSTSALADRINIKRKNAWPPAYLSVQEVIDCAN--AGSCEGGDV 156
           IPQ      CGSCWA+ + SA++DR            ++S  +++ C +     C GGD 
Sbjct: 110 IPQIADQSACGSCWAVAAASAMSDRFCTM--GGVQDVHISAGDLLACCSDCGDGCNGGDP 167

Query: 157 GPVYEYAHKHGIPHETCNNY---------QAKDG--QCDPYN----RCGSCWPDRCFDIK 201
              + Y    G+  + C  Y         ++K+G   C  +N    +C     D    + 
Sbjct: 168 DRAWAYFSSTGLVSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCNYTCDDPTIPVV 227

Query: 202 NYTLYKVKEFGPVSGIIKMKAEIYKGGPIACGIAATKKFDDYAGGIYKEKTNEEIN-HII 260
           NY  +       + G      E++  GP        + F  Y  G+Y   + + +  H +
Sbjct: 228 NYRSWTSYA---LQGEDDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYLGGHAV 284

Query: 261 SVVGWGKDENSGISYWIGRNSWGTAWGENGWFRI 294
            +VGWG   ++G+ YW   NSW T WG +G+F I
Sbjct: 285 RLVGWGT--SNGVPYWKIANSWNTEWGMDGYFLI 316
>M.Javanica_Scaff2107g020709 on CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 450

 Score = 62.4 bits (150), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 45/271 (16%)

Query: 28  LSRDENNNNWPEKSSYAVGPHLRGCYRPAPEEMRKEIKITPRLYELGHFDPLDLPETWDW 87
           ++R+E    +   +SY         +  A + +RK + +T              P   DW
Sbjct: 92  MTREEFRARYRNGASY---------FAAAQKRLRKTVNVTTG----------RAPAAVDW 132

Query: 88  RNVNGVNYVSADRNQHIPQYCGSCWAMGSTSALADRINIKRKNAWPPAYLSVQEVIDCAN 147
           R    V  V  D+ Q     CGSCWA  +   +  +  +      P   LS Q ++ C  
Sbjct: 133 REKGAVTPVK-DQGQ-----CGSCWAFSTIGNIEGQWQVAGN---PLVSLSEQMLVSCDT 183

Query: 148 AG-SCEGGDVGPVYEY---AHKHGIPHETCNNYQAKDGQCDPYNRCGSCWPDRCFDIKNY 203
               C GG +   + +   ++   +  E    Y + +G+     +C     +    I ++
Sbjct: 184 IDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGE---QPQCQMNGHEIGAAITDH 240

Query: 204 TLYKVKEFGPVSGIIKMKAEIYKGGPIACGIAATKKFDDYAGGIYKEKTNEEINHIISVV 263
                 E         + A + + GP+A  + AT  F DY GGI    T+E+++H + +V
Sbjct: 241 VDLPQDEDA-------IAAYLAENGPLAIAVDATS-FMDYNGGILTSCTSEQLDHGVLLV 292

Query: 264 GWGKDENSGISYWIGRNSWGTAWGENGWFRI 294
           G+  +++S   YWI +NSW   WGE+G+ RI
Sbjct: 293 GY--NDSSNPPYWIIKNSWSNMWGEDGYIRI 321
>M.Javanica_Scaff2107g020709 on P92132  CP2  (Cysteine protease)  [Giardia duodenalis]
          Length = 255

 Score = 55.8 bits (133), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 80/199 (40%), Gaps = 21/199 (10%)

Query: 77  DPLDLPETWDWRNVNGVNYVSADRNQHIPQY-----CGSCWAMGSTSALADRINIKRKNA 131
           D  D+PE++D+R          +    IP+      CGSCWA  S +   DR  +   + 
Sbjct: 71  DKDDVPESFDFRE---------EYPHCIPEVVDQGGCGSCWAFSSVATFGDRRCVAGLDK 121

Query: 132 WPPAYLSVQEVIDCANAG-SCEGGDVGPVYEYAHKHGIPHETCNNYQAKDGQCDPYNRCG 190
            P  Y S Q V+ C +   +C GG +  V+++  K G   + C  Y  K G       C 
Sbjct: 122 KPVKY-SPQYVVSCDHGDMACNGGWLPNVWKFLTKTGTTTDECVPY--KSGSTTLRGTCP 178

Query: 191 SCWPDRCFDIKNYTLYKVKEFGPVSGIIKMKAEIYKGGPIACGIAATKKFDDYAGGIYKE 250
           +   D    +   T    K++G    I  M   +   GP+         F  Y  G+Y+ 
Sbjct: 179 TKCADGSSKVHLATATSYKDYG--LDIPAMMKALSTSGPLQVAFLVHSDFMYYESGVYQH 236

Query: 251 KTN-EEINHIISVVGWGKD 268
                E  H + +VG+G D
Sbjct: 237 TYGYMEGGHAVEMVGYGTD 255
>M.Javanica_Scaff2107g020709 on CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 53.9 bits (128), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 94/253 (37%), Gaps = 52/253 (20%)

Query: 54  RPAPEEMRKEIKITPRLYELGHFDPLDLPETW----------------------DWRNVN 91
           R   E  R  +  T  L +L H  P +                           DWR   
Sbjct: 26  RLVQEHNRANLGFTVALNKLAHLTPAEYNSLLGFRMNKAERKAVKSNAIANADCDWRKKG 85

Query: 92  GVNYVSADRNQHIPQYCGSCWAMGSTSALADRINIKRKNAWPPAYLSVQEVIDCANAG-S 150
            VN +  D+ Q     CGSCWA  +  A   +  I  K       LS Q ++DC      
Sbjct: 86  AVNPIK-DQGQ-----CGSCWAFSAIQAQESQYYISFKTLQS---LSEQNLVDCVTTCYG 136

Query: 151 CEGGDVGPVYEYAHKH---GIPHETCNNYQAKDGQCDPYNRCGSCWPDRCFDIKNYTLYK 207
           C GG +   Y+Y  KH       E    Y A+DG C      G+        IK+Y    
Sbjct: 137 CNGGLMDAAYDYVVKHQSGKFMTEADYPYTARDGSCKFNAAKGTS------QIKSYV--N 188

Query: 208 VKEFGPVSGIIKMKAEIYKGGPIACGIAATK-KFDDYAGGIYKEK--TNEEINHIISVVG 264
           V E         +  ++   GP A  I A+   F  Y+ GIY E   ++  ++H +  VG
Sbjct: 189 VAEGDEKD----LATKVSTLGPAAIAIDASAWSFQLYSSGIYDESACSSYNLDHGVGCVG 244

Query: 265 WGKDENSGISYWI 277
           +G + +   +YWI
Sbjct: 245 YGTEGSK--NYWI 255
>M.Javanica_Scaff2107g020709 on CAA54437  CP3  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 53.5 bits (127), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 91/218 (41%), Gaps = 29/218 (13%)

Query: 41  SSYAVGPHLRGCYRPAPEEMRKEIKITPRLYELGHFDPLDLPETWDWRNVNGVNYVSADR 100
           S Y +  +   C  P+  ++    K T ++         D+P+  DWRN   VN +  D+
Sbjct: 60  SGYQLTMNHLSCMTPSEYKVLLGHKQTKKIEGEAKIFKGDVPDAVDWRNAKIVNPIK-DQ 118

Query: 101 NQHIPQYCGSCWAMGSTSALADRINIKRKNAWPPAYLSVQEVIDCANAG-SCEGGDVGPV 159
            Q     CGSCWA         +  +K+        L+ Q ++DC +    C+GGD    
Sbjct: 119 AQ-----CGSCWAFSVVQVQESQWALKKGQLLS---LAEQNMVDCVDTCYGCDGGDEYLA 170

Query: 160 YEYAHKH--GI-PHETCNNYQAKDGQCDPYNRCGSCWPDRCFDIKNYTLYKVKEFGPVSG 216
           Y+Y  KH  G+   ET   Y A+DG C            +    K  TL K     P + 
Sbjct: 171 YDYVIKHQKGLWMLETDYPYTARDGSC------------KFKAAKGVTLTK-SYVRPTTT 217

Query: 217 I--IKMKAEIYKGGPIACGIAATK-KFDDYAGGIYKEK 251
               ++KA   KGG ++  I A+   F  Y+ GIY  K
Sbjct: 218 QNEDELKAGCAKGGVVSIAIDASGYDFQLYSSGIYNPK 255
>M.Javanica_Scaff2107g020709 on AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 206

 Score = 51.6 bits (122), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 28/203 (13%)

Query: 86  DWRNVNGVNYVSADRNQHIPQYCGSCWAMGSTSALADRINIKRKNAWPPAYLSVQEVIDC 145
           DWR+   VN +  D+ Q     CGSCWA  +  A   +  I          LS Q ++DC
Sbjct: 26  DWRSKGVVNPIQ-DQGQ-----CGSCWAFSAIQAQESQYAITSGELQK---LSEQNLVDC 76

Query: 146 ANA-GSCEGGDVGPVYEYAHKHGIPHETC-NNYQAKDGQCDPYNRCGSCWPDRCFDIKNY 203
                 CEGG +   Y+Y  K+        N+Y        PY    + + D  FD    
Sbjct: 77  VTTCDGCEGGLMTNAYDYVIKYQDGKFMLENDY--------PYT---AYYYDCLFDTDKA 125

Query: 204 TLYKVKEFGPVSGIIK-MKAEIYKGGPIACGIAATK-KFDDYAGGIYK--EKTNEEINHI 259
               V     V G    +  +I   GP A  I A+   F  Y+ GIY    +++  ++H 
Sbjct: 126 VSNIVSYINVVEGDENDLATKISTNGPAAVAIDASHYSFQLYSQGIYNVPSRSSYGLDHG 185

Query: 260 ISVVGWGKDENSGISYWIGRNSW 282
           +  VG+G + ++   YWI +NSW
Sbjct: 186 VGCVGYGAEGST--KYWIVKNSW 206
>M.Javanica_Scaff2107g020709 on AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 47.4 bits (111), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 79/231 (34%), Gaps = 48/231 (20%)

Query: 54  RPAPEEMRKEIKITPRLYELGHFDPLDLPETW----------------------DWRNVN 91
           R   E  R  +  T  L +L H  P +                           DWR   
Sbjct: 39  RLVQEHNRANLGFTVALNKLAHLTPAEYNSLLGFRMNKAERKAVKSNAIANADCDWRKKG 98

Query: 92  GVNYVSADRNQHIPQYCGSCWAMGSTSALADRINIKRKNAWPPAYLSVQEVIDCANAG-S 150
            VN +  D+ Q     CGSCWA  +  A   +  I  K       LS Q ++DC      
Sbjct: 99  AVNPIK-DQGQ-----CGSCWAFSAIQAQESQYYISFKTLQS---LSEQNLVDCVTTCYG 149

Query: 151 CEGGDVGPVYEYAHKHG---IPHETCNNYQAKDGQCDPYNRCGSCWPDRCFDIKNYTLYK 207
           C GG +   Y+Y  KH       E    Y A+DG C      G+        IK+Y    
Sbjct: 150 CNGGLMDAAYDYVVKHQSGKFMTEADYPYTARDGSCKFNAAKGTS------QIKSYV--N 201

Query: 208 VKEFGPVSGIIKMKAEIYKGGPIACGIAATK-KFDDYAGGIYKEKTNEEIN 257
           V E         +  ++   GP A  I A+   F  Y+ GIY E      N
Sbjct: 202 VAEGDEKD----LATKVSTLGPAAIAIDASAWSFQLYSSGIYDESACSSYN 248
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff219g003577
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18583g079075
         (113 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17409g076630
         (276 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1620g017103
         (303 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19064g080058
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2052g020310
         (177 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17808g077462
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1644g017287
         (310 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22397g086079
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17952g077759
         (221 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff215g003532
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff192g003220
         (405 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20663g083086
         (172 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20497g082776
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17451g076713
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2202g021347
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1737g017965
         (256 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2046g020268
         (597 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1877g019014
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20643g083046
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22416g086105
         (299 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19144g080223
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18296g078473
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2021g020078
         (191 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff224g003653
         (175 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20773g083273
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18815g079528
         (557 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20663g083084
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21745g084989
         (163 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2009g019981
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2107g020710
         (213 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2246g021645
         (131 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2310g022076
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19004g079929
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff170g002924
         (357 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24093g088805
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16955g075689
         (500 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2053g020314
         (283 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff189g003196
         (250 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff244g003913
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1903g019208
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2174g021160
         (306 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20876g083471
         (200 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18203g078273
         (234 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16872g075510
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24006g088669
         (223 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21779g085047
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1695g017682
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18819g079533
         (421 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21517g084578
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2349g022341
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20216g082260
         (411 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20895g083498
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2250g021672
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19038g080003
         (221 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17363g076537
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2123g020841
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21030g083762
         (318 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20936g083571
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1970g019703
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2094g020597
         (268 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1771g018238
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20205g082248
         (196 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18184g078233
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16330g074348
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff208g003419
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1776g018277
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18430g078762
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2039g020215
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19980g081830
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17025g075830
         (189 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2493g023311
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20g000496
         (1170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 62   2e-10
>M.Javanica_Scaff20g000496 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 21/142 (14%)

Query: 1021 WGVWSECSRLCGKGVRSRSR--TCPSDASCP-GSSTEQSFCNEQACAEKETLN--AEWSG 1075
            +G WSECS  CG+G+R R+R  +  +D  C   +STE   CN Q C +   ++   +   
Sbjct: 1598 FGEWSECSATCGEGIRVRNRDNSLDNDDKCKLFNSTEMEACNIQECDDNNNVDICEDIGE 1657

Query: 1076 WSVWGPCSATCGNGVRRRTRHC------QYGNCPGYH-FDSSICNNGP-CSVEDA-SWGG 1126
            WS W  CS TCG   R RT         +Y NC  +   ++ +C   P CS E+   W  
Sbjct: 1658 WSDWSSCSKTCGYSTRSRTFTILPEYIGEYPNCKIFERSETEVCAFIPACSDENCFEWEE 1717

Query: 1127 WGYWSV-CSESCGQGFRRRVRK 1147
            W  WS  CS       R+RV+K
Sbjct: 1718 WNEWSSPCSP------RKRVQK 1733

 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 80/392 (20%), Positives = 133/392 (33%), Gaps = 98/392 (25%)

Query: 832  NGQWGQWTIWSSCTASCGDLGVQIRSR--------TCNINNRCEGEPTQNQPC----NRH 879
            N   G +  WS C+A+CG+ G+++R+R         C + N  E E    Q C    N  
Sbjct: 1592 NDMCGDFGEWSECSATCGE-GIRVRNRDNSLDNDDKCKLFNSTEMEACNIQECDDNNNVD 1650

Query: 880  VCPTIPAGEPVWTEWTPWTQCSVSCGRGSQAR-----------------YRRCQNSQGSI 922
            +C  I        EW+ W+ CS +CG  +++R                 + R +    + 
Sbjct: 1651 ICEDI-------GEWSDWSSCSKTCGYSTRSRTFTILPEYIGEYPNCKIFERSETEVCAF 1703

Query: 923  AFSCQGQTMELRNCDE--------LPCNSGNRLDRSGAQWTGNFPETSKNKQINTGXXXX 974
              +C  +     NC E         PC+   R+ ++      +   +S +          
Sbjct: 1704 IPACSDE-----NCFEWEEWNEWSSPCSPRKRVQKARVLKKDDVIISSGDNN------NN 1752

Query: 975  XXXXXXXGPGFQSRTRSCF--PQSGACDG---------SWQQRMACNLRECFGGWNTWGV 1023
                   G G ++ T + +   +S  C+           + +   C  +   G W+    
Sbjct: 1753 NNNNAKRGMGHKNSTFTSYNNKKSDICEEEVRHYLDKVEYDEESTCENKNPCGDWSD--- 1809

Query: 1024 WSECSRLCGKGVRSRSRTCPSDASCPGSSTEQSFCNEQACAEKETLN------AEWSGWS 1077
            WSEC R C  GVR R               ++          ++ L+       E S W 
Sbjct: 1810 WSECDRTCNVGVRIRHFISHMFDMVGDEDEKECLEYYNKVETQDCLHLPPCDGGECSDWE 1869

Query: 1078 VWGPCSA--TCGNGVRRRTRHC--------QYGNCPGYHFDSSICNNGPCSVED------ 1121
             W  C      GN   +R +          +  +       S +CN+     E+      
Sbjct: 1870 TWVECKEEDMIGNNCHKRNKKILTRKLELLKNKDITRTKNTSDVCNDYTLFREEDCPQSN 1929

Query: 1122 -----ASWGGWGYWSVCSESCGQG-FRRRVRK 1147
                 A    W  W  CS +CG+G F+ R RK
Sbjct: 1930 DTCINALCNEWEEWGDCSSTCGEGSFKIRKRK 1961
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2385g022564
         (208 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2357g022399
         (292 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22451g086172
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff212g003483
         (420 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17583g077002
         (193 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17019g075816
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20187g082217
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16920g075614
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2049g020285
         (210 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2270g021786
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22078g085533
         (168 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2124g020852
         (1279 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1661g017411
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20778g083281
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18239g078351
         (229 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22121g085617
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18654g079215
         (249 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21092g083863
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18741g079375
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2148g020997
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22563g086376
         (170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17255g076320
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16657g075062
         (488 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24486g089424
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18979g079866
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2014g020020
         (452 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24661g089694
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2251g021676
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff249g003974
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2261g021739
         (240 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2127g020865
         (168 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21234g084106
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17199g076201
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18935g079771
         (199 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff248g003959
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16510g074743
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22630g086478
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16575g074881
         (192 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24983g090183
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2123g020846
         (509 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20765g083259
         (238 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23448g087803
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17490g076795
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21318g084254
         (149 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21633g084798
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19g000484
         (240 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2365g022446
         (315 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1921g019347
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21240g084115
         (431 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24677g089718
         (200 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16656g075061
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1662g017418
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20373g082553
         (196 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2027g020120
         (165 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2497g023344
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16287g074250
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23201g087419
         (240 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1966g019676
         (247 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24712g089781
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16404g074505
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff205g003384
         (371 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18931g079764
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21367g084336
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1974g019735
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17218g076238
         (245 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2111g020734
         (209 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24466g089390
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2395g022630
         (202 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2276g021839
         (293 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23684g088174
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19803g081509
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22918g086955
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20g000501
         (270 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16674g075104
         (240 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1803g018461
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22730g086638
         (315 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24429g089334
         (191 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24282g089110
         (341 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16291g074258
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17651g077147
         (390 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2007g019963
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23983g088638
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16283g074242
         (431 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23229g087460
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23038g087164
         (238 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1852g018845
         (176 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16204g074053
         (485 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16829g075419
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23953g088592
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17894g077637
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2305g022052
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22337g085988
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21290g084205
         (218 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22130g085629
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18943g079792
         (373 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18942g079789
         (217 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1885g019064
         (606 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1649g017318
         (223 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23761g088300
         (186 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18308g078497
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1636g017216
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24768g089871
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16917g075605
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19448g080796
         (159 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2240g021609
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2074g020452
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19761g081422
         (473 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20013g081891
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22357g086026
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2451g023027
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21504g084554
         (194 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16798g075359
         (191 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21178g084011
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1832g018700
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17125g076037
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1897g019160
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20740g083219
         (239 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24646g089672
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21345g084302
         (255 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18672g079252
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff194g003244
         (128 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff242g003898
         (426 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22188g085725
         (398 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22155g085672
         (152 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22917g086952
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21325g084266
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18991g079893
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16977g075737
         (166 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2187g021248
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2033g020172
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2450g023021
         (173 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24251g089066
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18055g077969
         (289 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21086g083852
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2251g021674
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2246g021646
         (281 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2327g022184
         (413 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16875g075518
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23605g088062
         (212 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff165g002852
         (698 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1678g017558
         (387 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2107g020704
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16502g074728
         (444 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18378g078661
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22781g086727
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1900g019182
         (253 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21778g085046
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff214g003519
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18969g079843
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2265g021762
         (1220 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff174g002975
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18094g078051
         (588 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2146g020986
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19536g080981
         (383 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17628g077099
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17955g077768
         (227 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19088g080100
         (189 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1626g017139
         (374 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]          157   4e-46
P92132  CP2  (Cysteine protease)  [Giardia duodenalis]                 94   3e-23
PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]    77   3e-16
XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium falc...    64   3e-12
AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    64   4e-12
XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]           61   2e-11
CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]        61   4e-11
ABC02174  Falstatin  (Others)  [Plasmodium falciparum]                 56   1e-09
XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium falc...    56   1e-09
CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]            52   2e-08
AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]           50   3e-08
CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]            47   8e-07
CAA54437  CP3  (Cysteine protease)  [Trichomonas vaginalis]            46   1e-06
XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]           45   2e-06
AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]            44   5e-06
XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]           42   2e-05
>M.Javanica_Scaff1626g017139 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score =  157 bits (398), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/349 (33%), Positives = 162/349 (46%), Gaps = 58/349 (16%)

Query: 35  ARNFVEKLNGGEIGDGTWTAKYNHRFAAMPPTQRKKMQGLNGPVDGSLPRPYNLTHIAED 94
           ++ FV+++N   +  G W AKY+     +   + K++ G+       + +  N + + + 
Sbjct: 33  SKAFVDRVN--RLNRGIWKAKYDGVMQNITLREAKRLNGV-------IKKNNNASILPKR 83

Query: 95  KIXXXXXXXXXXXXADQCTYYYEFDSRTQWPQCAKIINNIRDQSTCGDCWAVASGSAFTD 154
           +                      FDS   WP C   I  I DQS CG CWAVA+ SA +D
Sbjct: 84  RFTEEEARAPLPS---------SFDSAEAWPNC-PTIPQIADQSACGSCWAVAAASAMSD 133

Query: 155 RYCIERAKLGLYTSPYNPRNQFSESDLMSCTPNTF-GCSGGWPLYAWQYMQTNGIVTGSN 213
           R+C       ++          S  DL++C  +   GC+GG P  AW Y  + G+V  S+
Sbjct: 134 RFCTMGGVQDVH---------ISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLV--SD 182

Query: 214 YTQSTGCKPYPFPPIGTETYKAPGCSPYCTNTNWQN---NYRNDK------KYASWAA-G 263
           Y     C+PYPFP     +    G  P C+  N+     NY  D        Y SW +  
Sbjct: 183 Y-----CQPYPFPHCSHHSKSKNGYPP-CSQFNFDTPKCNYTCDDPTIPVVNYRSWTSYA 236

Query: 264 LTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHTTGEYDGGHAIRLIGWG 323
           L G       D    E+   G       VY DF  Y+ GVY H +G+Y GGHA+RL+GWG
Sbjct: 237 LQGE------DDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYLGGHAVRLVGWG 290

Query: 324 TQTCDGVDQPFWIAINSWNVEWGMKGTFLIAQGNDECHIESMGISFGTP 372
           T   +GV  P+W   NSWN EWGM G FLI +G+ EC IE  G S G P
Sbjct: 291 TS--NGV--PYWKIANSWNTEWGMDGYFLIRRGSSECGIEDGG-SAGIP 334
>M.Javanica_Scaff1626g017139 on P92132  CP2  (Cysteine protease)  [Giardia duodenalis]
          Length = 255

 Score = 94.4 bits (233), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 31/208 (14%)

Query: 118 FDSRTQWPQCAKIINNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFS 177
           FD R ++P C   I  + DQ  CG CWA +S + F DR C+     GL   P     ++S
Sbjct: 79  FDFREEYPHC---IPEVVDQGGCGSCWAFSSVATFGDRRCVA----GLDKKPV----KYS 127

Query: 178 ESDLMSCTPNTFGCSGGWPLYAWQYMQTNGIVTGSNYTQSTGCKPYPFPPIGTETYKAPG 237
              ++SC      C+GGW    W+++   G  T         C PY     G+ T +   
Sbjct: 128 PQYVVSCDHGDMACNGGWLPNVWKFLTKTGTTTDE-------CVPYK---SGSTTLRGT- 176

Query: 238 CSPYCTNTNWQNNYRNDKKYASWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFY 297
           C   C + + + +      Y  +        G ++   +KA + T+G +     V+SDF 
Sbjct: 177 CPTKCADGSSKVHLATATSYKDY--------GLDIPAMMKA-LSTSGPLQVAFLVHSDFM 227

Query: 298 HYSQGVYKHTTGEYDGGHAIRLIGWGTQ 325
           +Y  GVY+HT G  +GGHA+ ++G+GT 
Sbjct: 228 YYESGVYQHTYGYMEGGHAVEMVGYGTD 255
>M.Javanica_Scaff1626g017139 on PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]
          Length = 569

 Score = 76.6 bits (187), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 107/254 (42%), Gaps = 70/254 (27%)

Query: 130 IINNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQ----FSESDLMSCT 185
           I++  +DQ  CG CWA AS              +G   S +  +N+    FSE +++ C+
Sbjct: 344 IVHEPKDQGLCGSCWAFAS--------------VGNIESVFAKKNKNILSFSEQEVVDCS 389

Query: 186 PNTFGCSGGWPLYAWQYMQTNGIVTGSNYTQSTGCKPYPFPPIGTETYKAPGCSPYCTNT 245
            + FGC GG P Y++ Y+  N +  G  Y                  YKA     +C   
Sbjct: 390 KDNFGCDGGHPFYSFLYVLQNELCLGDEY-----------------KYKAKD-DMFCL-- 429

Query: 246 NWQNNYRNDKKYASWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYK 305
               NYR  +K +  + G       +++ A+  E+      VG   V +DF  YS+GVY 
Sbjct: 430 ----NYRCKRKVSLSSIGAVKEN--QLILAL-NEVGPLSVNVG---VNNDFVAYSEGVYN 479

Query: 306 HTTGEYDGGHAIRLIGWGT---------------QTCDGVDQP------FWIAINSWNVE 344
            T  E +  H++ L+G+G                 T +  +QP      +WI  NSW+ +
Sbjct: 480 GTCSE-ELNHSVLLVGYGQVEKTKLNYNNKIQTYNTKENSNQPDDNIIYYWIIKNSWSKK 538

Query: 345 WGMKGTFLIAQGND 358
           WG  G   +++  +
Sbjct: 539 WGENGFMRLSRNKN 552
>M.Javanica_Scaff1626g017139 on XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 482

 Score = 64.3 bits (155), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 48/223 (21%)

Query: 134 IRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSESDLMSCTPNTFGCSG 193
           ++DQ  CG CWA +S  +   +Y I + KL             SE +L+ C+   +GC+G
Sbjct: 274 VKDQKNCGSCWAFSSIGSVESQYAIRKNKLI----------TLSEQELVDCSFKNYGCNG 323

Query: 194 GWPLYAWQYM-QTNGIVTGSNYTQSTGCKPYPFPPIGTETYKAPGCSPYCTNTNWQNNYR 252
           G    A++ M +  GI T  +Y       PY               +P   N +      
Sbjct: 324 GLINNAFEDMIELGGICTDDDY-------PY------------VSDAPNLCNIDRCTEKY 364

Query: 253 NDKKYASWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHTTGEYD 312
             K Y S              + +K  ++  G +  ++ V  DF  Y +G++    G+ +
Sbjct: 365 GIKNYLSVPD-----------NKLKEALRFLGPISISIAVSDDFPFYKEGIFDGECGD-E 412

Query: 313 GGHAIRLIGWGTQ------TCDGVDQPFWIAINSWNVEWGMKG 349
             HA+ L+G+G +      T  G    ++I  NSW  +WG +G
Sbjct: 413 LNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERG 455
>M.Javanica_Scaff1626g017139 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 63.9 bits (154), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 48/223 (21%)

Query: 134 IRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSESDLMSCTPNTFGCSG 193
           ++DQ  CG CWA +S  +   +Y I + KL             SE +L+ C+   +GC+G
Sbjct: 276 VKDQKNCGSCWAFSSIGSVESQYAIRKNKLI----------TLSEQELVDCSFKNYGCNG 325

Query: 194 GWPLYAWQYM-QTNGIVTGSNYTQSTGCKPYPFPPIGTETYKAPGCSPYCTNTNWQNNYR 252
           G    A++ M +  GI T  +Y       PY               +P   N +      
Sbjct: 326 GLINNAFEDMIELGGICTDDDY-------PY------------VSDAPNLCNIDRCTEKY 366

Query: 253 NDKKYASWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHTTGEYD 312
             K Y S              + +K  ++  G +  ++ V  DF  Y +G++    G+  
Sbjct: 367 GIKNYLSVPD-----------NKLKEALRFLGPISISVAVSDDFAFYKEGIFDGECGD-Q 414

Query: 313 GGHAIRLIGWGTQ------TCDGVDQPFWIAINSWNVEWGMKG 349
             HA+ L+G+G +      T  G    ++I  NSW  +WG +G
Sbjct: 415 LNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERG 457
>M.Javanica_Scaff1626g017139 on XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]
          Length = 318

 Score = 60.8 bits (146), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 56/261 (21%)

Query: 118 FDSRTQWPQCAK-----IINNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNP 172
           +DSR   P+         +  IRDQ++CG C++ AS +A   R  +  +K          
Sbjct: 89  YDSRGDVPESVDWRAKGKVPAIRDQASCGSCYSFASVAAIEGRLLVAGSKKFTVDDL--- 145

Query: 173 RNQFSESDLMSCTPNT--FGCSGGWPLYAWQYMQTNGIVTGSNYTQSTGCKPYPFPPIGT 230
               SE  L+ C+ +    GC+GG  L +++Y++ NGI+   +Y           P +  
Sbjct: 146 --DLSEQQLVDCSVSVGNKGCNGGSLLLSFRYVKLNGIMQEKDY-----------PYVAA 192

Query: 231 ETYKAPGCSPYCTNTNWQNNYRNDKKYASWAAGLTGSTGQEVVD--AIKAEIQTNGTVVG 288
           E          CT          DKK  +        TGQ++V   + KA ++       
Sbjct: 193 E--------ETCT---------YDKKKVA-----VKITGQKLVRPGSEKALMRAAAEGPV 230

Query: 289 TMYVYSD---FYHYSQGVYKHTT-GEYDGGHAIRLIGWGTQTCDGVDQPFWIAINSWNVE 344
              + +    F  Y  G+Y           H + ++G+GTQ  +G +  +WI  NSW   
Sbjct: 231 AAAIDASGVKFQLYKSGIYNSKECSSTQLNHGVAVVGYGTQ--NGTE--YWIVRNSWGTI 286

Query: 345 WGMKGTFLIAQG-NDECHIES 364
           WG +G  L+++  N++C I S
Sbjct: 287 WGDQGYVLMSRNKNNQCGIAS 307
>M.Javanica_Scaff1626g017139 on CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 450

 Score = 60.8 bits (146), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 43/232 (18%)

Query: 131 INNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSESDLMSCTPNTFG 190
           +  ++DQ  CG CWA      F+    IE    G +    NP    SE  L+SC    FG
Sbjct: 138 VTPVKDQGQCGSCWA------FSTIGNIE----GQWQVAGNPLVSLSEQMLVSCDTIDFG 187

Query: 191 CSGGWPLYAWQYM-QTNGIVTGSNYTQSTGCKPYPFPPIGTETYKAPGCSPYCTNTNWQN 249
           C GG    A+ ++  +NG   G+ +T+++    YP+           G  P C     + 
Sbjct: 188 CGGGLMDNAFNWIVNSNG---GNVFTEAS----YPY-------VSGNGEQPQCQMNGHE- 232

Query: 250 NYRNDKKYASWAAGLTGSTG-QEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHTT 308
                       A +T      +  DAI A +  NG +   +   S F  Y+ G+    T
Sbjct: 233 ----------IGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATS-FMDYNGGILTSCT 281

Query: 309 GEYDGGHAIRLIGWGTQTCDGVDQPFWIAINSWNVEWGMKGTFLIAQGNDEC 360
            E    H + L+G+     D  + P+WI  NSW+  WG  G   I +G ++C
Sbjct: 282 SE-QLDHGVLLVGYN----DSSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQC 328
>M.Javanica_Scaff1626g017139 on ABC02174  Falstatin  (Others)  [Plasmodium falciparum]
          Length = 492

 Score = 56.2 bits (134), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 83/222 (37%), Gaps = 46/222 (20%)

Query: 134 IRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSESDLMSCTPNTFGCSG 193
           ++DQ+ CG CWA +S  +   +Y I +  L L          FSE +L+ C+    GC G
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIRKKALFL----------FSEQELVDCSVKNNGCYG 333

Query: 194 GWPLYAWQYMQTNGIVTGSNYTQSTGCKPYPFPPIGTETYKAPGCSPYCTNTNWQNNYRN 253
           G+   A+  M   G +   +         YP+     ET     C+   T          
Sbjct: 334 GYITNAFDDMIDLGGLCSQD--------DYPYVSNLPETCNLKRCNERYT---------- 375

Query: 254 DKKYASWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHTTGEYDG 313
            K Y S              D  K  ++  G +  ++    DF  Y  G Y    G    
Sbjct: 376 IKSYVSIPD-----------DKFKEALRYLGPISISIAASDDFAFYRGGFYDGECGA-AP 423

Query: 314 GHAIRLIGWGTQTCDGVDQP------FWIAINSWNVEWGMKG 349
            HA+ L+G+G +     D        ++I  NSW  +WG  G
Sbjct: 424 NHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGG 465
>M.Javanica_Scaff1626g017139 on XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 492

 Score = 56.2 bits (134), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 83/222 (37%), Gaps = 46/222 (20%)

Query: 134 IRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSESDLMSCTPNTFGCSG 193
           ++DQ+ CG CWA +S  +   +Y I +  L L          FSE +L+ C+    GC G
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIRKKALFL----------FSEQELVDCSVKNNGCYG 333

Query: 194 GWPLYAWQYMQTNGIVTGSNYTQSTGCKPYPFPPIGTETYKAPGCSPYCTNTNWQNNYRN 253
           G+   A+  M   G +   +         YP+     ET     C+   T          
Sbjct: 334 GYITNAFDDMIDLGGLCSQD--------DYPYVSNLPETCNLKRCNERYT---------- 375

Query: 254 DKKYASWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHTTGEYDG 313
            K Y S              D  K  ++  G +  ++    DF  Y  G Y    G    
Sbjct: 376 IKSYVSIPD-----------DKFKEALRYLGPISISIAASDDFAFYRGGFYDGECGA-AP 423

Query: 314 GHAIRLIGWGTQTCDGVDQP------FWIAINSWNVEWGMKG 349
            HA+ L+G+G +     D        ++I  NSW  +WG  G
Sbjct: 424 NHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGG 465
>M.Javanica_Scaff1626g017139 on CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 51.6 bits (122), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 76/186 (40%), Gaps = 49/186 (26%)

Query: 130 IINNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSESDLMSCTPNTF 189
           I+N I+DQ  CG CWA ++  A   RY     +L             +E +++ C  + +
Sbjct: 110 IVNKIKDQGQCGSCWAFSAIQASESRYAQANKQL----------LDLAEQNIVDCVTSCY 159

Query: 190 GCSGGWPLYAWQYM---QTNGIVTGSNYTQSTGCKPYPFPPIGTETYKAPGCSPYCTNTN 246
           GC+GGWP  A  Y+   Q    +  ++Y       PY        T +   C        
Sbjct: 160 GCNGGWPSKAIDYVVKHQAGKFMLTADY-------PY--------TARDGTC-------- 196

Query: 247 WQNNYRNDKKYASWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKH 306
                   K +AS + GLT   G + V   +AE+       G + V  D  HYS  +Y  
Sbjct: 197 --------KFHASKSVGLT--KGYDEVKDTEAEL-AKAASKGVVSVCIDASHYSFQLY-- 243

Query: 307 TTGEYD 312
           T+G YD
Sbjct: 244 TSGIYD 249
>M.Javanica_Scaff1626g017139 on AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 206

 Score = 50.1 bits (118), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 84/217 (38%), Gaps = 47/217 (21%)

Query: 130 IINNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSESDLMSCTPNTF 189
           ++N I+DQ  CG CWA ++  A   +Y I   +L           + SE +L+ C     
Sbjct: 32  VVNPIQDQGQCGSCWAFSAIQAQESQYAITSGEL----------QKLSEQNLVDCVTTCD 81

Query: 190 GCSGGWPLYAWQYM---QTNGIVTGSNYTQSTGCKPYPFPPIGTETYKAPGCSPYCTNTN 246
           GC GG    A+ Y+   Q    +  ++Y       PY                   T   
Sbjct: 82  GCEGGLMTNAYDYVIKYQDGKFMLENDY-------PY-------------------TAYY 115

Query: 247 WQNNYRNDKKYASWAAGLTGSTGQEVVDAIKAEIQTNG-TVVGTMYVYSDFYHYSQGVYK 305
           +   +  DK  ++  + +    G E  + +  +I TNG   V     +  F  YSQG+Y 
Sbjct: 116 YDCLFDTDKAVSNIVSYINVVEGDE--NDLATKISTNGPAAVAIDASHYSFQLYSQGIYN 173

Query: 306 -HTTGEYDGGHAIRLIGWGTQTCDGVDQPFWIAINSW 341
             +   Y   H +  +G+G +        +WI  NSW
Sbjct: 174 VPSRSSYGLDHGVGCVGYGAEG----STKYWIVKNSW 206
>M.Javanica_Scaff1626g017139 on CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 46.6 bits (109), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 79/210 (37%), Gaps = 45/210 (21%)

Query: 131 INNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSESDLMSCTPNTFG 190
           +N I+DQ  CG CWA ++  A   +Y I           +      SE +L+ C    +G
Sbjct: 87  VNPIKDQGQCGSCWAFSAIQAQESQYYI----------SFKTLQSLSEQNLVDCVTTCYG 136

Query: 191 CSGGWPLYAWQYM---QTNGIVTGSNYTQSTGCKPYPFPPIGTETYKAPGCSPYCTNTNW 247
           C+GG    A+ Y+   Q+   +T ++Y       PY       +   A G S        
Sbjct: 137 CNGGLMDAAYDYVVKHQSGKFMTEADY-------PYTARDGSCKFNAAKGTSQI------ 183

Query: 248 QNNYRNDKKYASWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHT 307
                  K Y + A G       +V     A I  + +          F  YS G+Y  +
Sbjct: 184 -------KSYVNVAEGDEKDLATKVSTLGPAAIAIDASAW-------SFQLYSSGIYDES 229

Query: 308 T-GEYDGGHAIRLIGWGTQTCDGVDQPFWI 336
               Y+  H +  +G+GT+      + +WI
Sbjct: 230 ACSSYNLDHGVGCVGYGTEG----SKNYWI 255
>M.Javanica_Scaff1626g017139 on CAA54437  CP3  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 45.8 bits (107), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 10/76 (13%)

Query: 128 AKIINNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSESDLMSCTPN 187
           AKI+N I+DQ+ CG CWA +       ++ +++ +L             +E +++ C   
Sbjct: 109 AKIVNPIKDQAQCGSCWAFSVVQVQESQWALKKGQL----------LSLAEQNMVDCVDT 158

Query: 188 TFGCSGGWPLYAWQYM 203
            +GC GG    A+ Y+
Sbjct: 159 CYGCDGGDEYLAYDYV 174
>M.Javanica_Scaff1626g017139 on XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 45.4 bits (106), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 119/324 (36%), Gaps = 60/324 (18%)

Query: 51  TWTAKYNHRFAAMPPTQRKKMQGLN----------GPVDGSLPRPYNLTHIAEDKIXXXX 100
           TW +K N  F A+   +R+ +  +N          G    S+  P+    +  ++     
Sbjct: 18  TWASKNNKHFTAIEKLRRRAIFNMNAKFVDSFNKIGSFKLSVDGPF--AAMTNEEYRTLL 75

Query: 101 XXXXXXXXADQCTYY-YEFDSRTQWPQCAKIINNIRDQSTCGDCWAVASGSAFTDRYCIE 159
                     Q  Y   +      W +  K+   IRDQ+ CG C+   S +A   R  IE
Sbjct: 76  KSKRTTEENGQVKYLNIQAPESVDWRKEGKV-TPIRDQAQCGSCYTFGSLAALEGRLLIE 134

Query: 160 RAKLGLYTSPYNPRNQFSESDLMSCTPN--TFGCSGGWPLYAWQYMQTNGIVTGSNYTQS 217
           +          N  +  SE  ++ CT +    GC+GG     + Y+  +G+   S+Y   
Sbjct: 135 KG------GDANTLD-LSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEHGVAKESDY--- 184

Query: 218 TGCKPYPFPPIGTETYKAPGCSPYCTNTNWQNNYRNDKKYASWAAGLTGSTGQEVVDAIK 277
                   P  G+++        +   T +    RN++  A   A L+       +DA  
Sbjct: 185 --------PYTGSDSTCKTNVKSFAKITGYTKVPRNNE--AELKAALSQGLVDVSIDASS 234

Query: 278 AEIQTNGTVVGTMYVYSDFYHYSQGVYKHTTGE---YDGGHAIRLIGWGTQTCDGVDQPF 334
           A+ Q                 Y  G Y  T  +   +   H +  +G+G    DG  +  
Sbjct: 235 AKFQL----------------YKSGAYTDTKCKNNYFALNHEVCAVGYG--VVDG--KEC 274

Query: 335 WIAINSWNVEWGMKGTF-LIAQGN 357
           WI  NSW   WG KG   ++ +GN
Sbjct: 275 WIVRNSWGTGWGDKGYINMVIEGN 298
>M.Javanica_Scaff1626g017139 on AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 44.3 bits (103), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 13/87 (14%)

Query: 131 INNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSESDLMSCTPNTFG 190
           +N I+DQ  CG CWA ++  A   +Y I           +      SE +L+ C    +G
Sbjct: 100 VNPIKDQGQCGSCWAFSAIQAQESQYYI----------SFKTLQSLSEQNLVDCVTTCYG 149

Query: 191 CSGGWPLYAWQYM---QTNGIVTGSNY 214
           C+GG    A+ Y+   Q+   +T ++Y
Sbjct: 150 CNGGLMDAAYDYVVKHQSGKFMTEADY 176
>M.Javanica_Scaff1626g017139 on XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 42.4 bits (98), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/322 (21%), Positives = 116/322 (36%), Gaps = 56/322 (17%)

Query: 51  TWTAKYNHRFAAMPPTQRKKMQGLNGPV--DGSLPRPYNLT------HIAEDKIXXXXXX 102
           TW A  N  F A+   +R+ +  +N  +  + +    + L+       +  ++       
Sbjct: 18  TWVANNNKHFTAVESLRRRAIFNMNARIVAENNRKETFKLSVDGPFAAMTNEEYNSLLKL 77

Query: 103 XXXXXXADQCTYY-YEFDSRTQWPQCAKIINNIRDQSTCGDCWAVASGSAFTDRYCIERA 161
                   +  Y   +      W +  K+   IRDQ  CG C+   S +A   R  IE+ 
Sbjct: 78  KRSGEEKGEVRYLNIQAPKAVDWRKKGKV-TPIRDQGNCGSCYTFGSIAALEGRLLIEKG 136

Query: 162 KLGLYTSPYNPRNQFSESDLMSCTPN--TFGCSGGWPLYAWQYMQTNGIVTGSNYTQSTG 219
                    +     SE  ++ CT      GC+GG     + Y+  NGI   S+Y     
Sbjct: 137 -------GDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMENGIAKESDY----- 184

Query: 220 CKPYPFPPIGTETYKAPGCSPYCTNTNWQNNYRNDKKYASWAAGLTGSTGQEVVDAIKAE 279
                 P  G+++        +    ++    RN++        L  +  Q +VD     
Sbjct: 185 ------PYTGSDSTCRSDVKAFAKIKSYNRVARNNE------VELKAAISQGLVD----- 227

Query: 280 IQTNGTVVGTMYVYSDFYHYSQGVY--KHTTGEYDG-GHAIRLIGWGTQTCDGVDQPFWI 336
           +  + + V        F  Y  G Y  K     Y    H +  +G+G    DG  +  WI
Sbjct: 228 VSIDASSV-------QFQLYKSGAYTDKQCKNNYFALNHEVCAVGYGV--VDG--KECWI 276

Query: 337 AINSWNVEWGMKGTF-LIAQGN 357
             NSW   WG KG   ++ +GN
Sbjct: 277 VRNSWGTGWGEKGYINMVIEGN 298
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2122g020840
         (176 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1953g019584
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23332g087607
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1852g018848
         (639 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1869g018948
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17033g075842
         (611 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2281g021872
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17831g077502
         (652 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18047g077946
         (214 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22955g087018
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2196g021295
         (237 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23819g088386
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16g000408
         (197 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24704g089764
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21477g084511
         (169 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16732g075219
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20802g083340
         (248 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23269g087519
         (317 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22658g086518
         (303 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19528g080968
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20908g083523
         (281 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1838g018740
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17975g077817
         (344 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19509g080929
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19609g081130
         (167 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23396g087730
         (422 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22g000524
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19295g080499
         (136 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2356g022391
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16844g075452
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21938g085304
         (243 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17111g076004
         (252 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1862g018911
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22129g085627
         (180 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17540g076898
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17454g076722
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1889g019093
         (195 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2427g022868
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1801g018449
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2434g022916
         (271 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17305g076424
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1970g019706
         (258 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16344g074380
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22087g085552
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1838g018741
         (228 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2343g022294
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1943g019512
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20632g083027
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20665g083088
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21757g085009
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20216g082261
         (152 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17781g077409
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16387g074472
         (753 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16613g074966
         (155 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1945g019521
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff179g003053
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22318g085952
         (428 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2116g020777
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20881g083476
         (278 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16498g074718
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1641g017255
         (177 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1949g019559
         (397 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19550g081007
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24409g089302
         (265 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1907g019249
         (311 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20517g082821
         (135 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24886g090041
         (146 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff237g003826
         (282 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20789g083311
         (258 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16877g075522
         (785 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1972g019723
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff180g003076
         (700 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22241g085816
         (136 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18236g078348
         (228 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23136g087328
         (202 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2025g020098
         (211 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22659g086519
         (162 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24858g089998
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16738g075237
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22869g086865
         (218 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17727g077303
         (290 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16660g075067
         (487 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19g000485
         (241 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24410g089305
         (201 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2117g020788
         (173 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1879g019031
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2084g020526
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2432g022906
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20314g082437
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17742g077330
         (169 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1947g019545
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff194g003249
         (318 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2025g020101
         (207 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20151g082143
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1783g018329
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18183g078227
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20883g083480
         (292 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1742g018010
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16300g074280
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16361g074416
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17483g076784
         (410 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2254g021703
         (476 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22802g086759
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24504g089454
         (362 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16341g074371
         (271 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24081g088787
         (224 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1781g018317
         (852 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17858g077557
         (166 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19095g080116
         (87 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16193g074026
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16962g075708
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19883g081665
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1832g018702
         (311 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2160g021077
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21907g085247
         (282 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2291g021948
         (59 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24419g089317
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19979g081827
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17929g077705
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17394g076597
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21424g084424
         (451 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19216g080352
         (307 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23768g088313
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16301g074284
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16676g075107
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18731g079346
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1737g017961
         (299 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23353g087643
         (443 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1838g018746
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16995g075774
         (565 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24263g089084
         (286 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21695g084900
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22051g085481
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20777g083279
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22242g085817
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2502g023372
         (759 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1660g017408
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2314g022103
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16715g075189
         (135 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19462g080837
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24199g088978
         (521 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff193g003237
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21504g084557
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18377g078659
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23739g088267
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16787g075339
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17422g076655
         (120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2410g022742
         (298 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22782g086728
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17631g077103
         (203 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16692g075142
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23492g087884
         (335 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16491g074697
         (415 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2375g022507
         (458 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21940g085309
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21073g083831
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2490g023292
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2012g020003
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23993g088654
         (384 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18132g078127
         (349 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18559g079024
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17925g077698
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18128g078113
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff196g003278
         (391 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2314g022102
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18323g078530
         (352 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21906g085243
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2478g023204
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff224g003660
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2074g020448
         (816 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19579g081069
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23448g087802
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20546g082879
         (245 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19801g081506
         (162 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24847g089977
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22276g085871
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2045g020252
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff198g003300
         (269 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17360g076533
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1989g019843
         (213 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16559g074847
         (205 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20412g082630
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23039g087167
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1720g017835
         (1446 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21535g084608
         (332 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1919g019332
         (299 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18839g079583
         (363 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1704g017743
         (311 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1904g019223
         (135 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16828g075412
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21905g085239
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24608g089605
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1806g018487
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22g000532
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24615g089619
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff245g003917
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16495g074707
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff232g003751
         (149 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24076g088778
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1g000009
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23898g088507
         (113 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff233g003767
         (402 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19798g081500
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23018g087132
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16679g075115
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16191g074022
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16909g075587
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19313g080532
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16563g074855
         (227 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20903g083513
         (251 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21350g084312
         (192 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2427g022864
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2129g020876
         (163 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24951g090137
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2200g021331
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21010g083725
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19696g081294
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21151g083962
         (254 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22948g087005
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22968g087043
         (190 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21474g084506
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17991g077850
         (446 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21628g084786
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2117g020789
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1694g017677
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20651g083061
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24655g089685
         (316 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21382g084358
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18521g078953
         (501 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18993g079901
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23066g087207
         (448 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1807g018490
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2230g021541
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21035g083768
         (533 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24940g090120
         (184 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21205g084060
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24616g089620
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18660g079227
         (296 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22831g086800
         (389 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24423g089328
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23496g087888
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2441g022962
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24903g090066
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2107g020705
         (172 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22907g086929
         (252 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1896g019148
         (312 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21392g084372
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2019g020073
         (238 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17539g076895
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16482g074680
         (222 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22679g086556
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1759g018155
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2332g022212
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18242g078357
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20923g083546
         (202 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1853g018852
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16220g074089
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18126g078108
         (333 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24673g089712
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2092g020588
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19000g079920
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1965g019669
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1811g018524
         (251 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2411g022748
         (220 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18455g078813
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2085g020535
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20094g082036
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1892g019111
         (597 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20787g083302
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23771g088319
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24652g089681
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23408g087744
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1862g018912
         (274 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2454g023051
         (260 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff195g003264
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2262g021752
         (209 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff232g003760
         (181 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16948g075675
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19982g081835
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23249g087487
         (236 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17541g076904
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20967g083633
         (185 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2223g021488
         (414 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2280g021866
         (167 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20404g082619
         (748 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff193g003232
         (309 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23393g087722
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16986g075759
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19419g080740
         (163 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16233g074119
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2069g020410
         (129 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22390g086069
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2044g020240
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1912g019287
         (264 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16648g075036
         (144 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2228g021528
         (362 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]          152   2e-44
P92132  CP2  (Cysteine protease)  [Giardia duodenalis]                 87   1e-20
PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]    83   3e-18
ABC02174  Falstatin  (Others)  [Plasmodium falciparum]                 80   2e-17
XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium falc...    80   2e-17
XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]           73   2e-15
AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    72   8e-15
CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]        72   8e-15
XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium falc...    72   1e-14
AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]           57   2e-10
CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]            51   3e-08
XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]           49   1e-07
CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]            48   3e-07
AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]            48   3e-07
XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]           47   6e-07
CAA54437  CP3  (Cysteine protease)  [Trichomonas vaginalis]            43   1e-05
>M.Javanica_Scaff2228g021528 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score =  152 bits (385), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/329 (34%), Positives = 157/329 (47%), Gaps = 46/329 (13%)

Query: 42  VKEINVKAAGIWTASVN-ELSRLPLAKQKILCGAKLSFELKLNKTEAEPPEFNTKAGAQC 100
           V  +N    GIW A  +  +  + L + K L G       K N     P    T+  A+ 
Sbjct: 37  VDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVIK----KNNNASILPKRRFTEEEARA 92

Query: 101 TTKIDFDARTKWSGCSSIIGRIQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDA 160
                FD+   W  C +I  +I +Q  CGSCWAV+ ASA +DR+C         + G   
Sbjct: 93  PLPSSFDSAEAWPNCPTI-PQIADQSACGSCWAVAAASAMSDRFC---------TMGGVQ 142

Query: 161 SLQFSALDVLTC-SMQGDGCWGGSPSQAWRWIQTKGICTGTDYNWKSGCKPYPF------ 213
            +  SA D+L C S  GDGC GG P +AW +  + G+ +  DY     C+PYPF      
Sbjct: 143 DVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLVS--DY-----CQPYPFPHCSHH 195

Query: 214 SQNQAGPAPPCKSSCTASWKTAY-------PQDKHMGTSSGQLYGNQATVAAIQREIQTN 266
           S+++ G  PPC      + K  Y       P   +   +S  L G    +    RE+   
Sbjct: 196 SKSKNG-YPPCSQFNFDTPKCNYTCDDPTIPVVNYRSWTSYALQGEDDYM----RELFFR 250

Query: 267 GPVIAVFLAYQDFMSYRSGVYFRTTNQRVGYHAVRVLGWGTQTCGSQKIDFWIAANSWGT 326
           GP    F  Y+DF++Y SGVY   + Q +G HAVR++GWGT    S  + +W  ANSW T
Sbjct: 251 GPFEVAFDVYEDFIAYNSGVYHHVSGQYLGGHAVRLVGWGT----SNGVPYWKIANSWNT 306

Query: 327 GWGEAGFFKIRRGVNEVGFEQSEISFGLP 355
            WG  G+F IRRG +E G E    S G+P
Sbjct: 307 EWGMDGYFLIRRGSSECGIEDGG-SAGIP 334
>M.Javanica_Scaff2228g021528 on P92132  CP2  (Cysteine protease)  [Giardia duodenalis]
          Length = 255

 Score = 87.0 bits (214), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 106 FDARTKWSGCSSIIGRIQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDASLQFS 165
           FD R ++  C   I  + +QG CGSCWA S+ + + DR C+A   K          +++S
Sbjct: 79  FDFREEYPHC---IPEVVDQGGCGSCWAFSSVATFGDRRCVAGLDK--------KPVKYS 127

Query: 166 ALDVLTCSMQGDGCWGGSPSQAWRWIQTKGICTGTDYNWKSGCKPYPFSQNQAGPAPPCK 225
              V++C      C GG     W+++   G  T     +KSG      S    G    C 
Sbjct: 128 PQYVVSCDHGDMACNGGWLPNVWKFLTKTGTTTDECVPYKSG------STTLRGT---CP 178

Query: 226 SSCTASWKTAYPQDKHMGT-SSGQLYGNQATVAAIQREIQTNGPVIAVFLAYQDFMSYRS 284
           + C            H+ T +S + YG    + A+ + + T+GP+   FL + DFM Y S
Sbjct: 179 TKCADGSSKV-----HLATATSYKDYG--LDIPAMMKALSTSGPLQVAFLVHSDFMYYES 231

Query: 285 GVYFRTTNQRVGYHAVRVLGWGTQ 308
           GVY  T     G HAV ++G+GT 
Sbjct: 232 GVYQHTYGYMEGGHAVEMVGYGTD 255
>M.Javanica_Scaff2228g021528 on PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]
          Length = 569

 Score = 82.8 bits (203), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 104/245 (42%), Gaps = 57/245 (23%)

Query: 118 IIGRIQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDASLQFSALDVLTCSMQGD 177
           I+   ++QG CGSCWA ++       +    AKK +N       L FS  +V+ CS    
Sbjct: 344 IVHEPKDQGLCGSCWAFASVGNIESVF----AKKNKNI------LSFSEQEVVDCSKDNF 393

Query: 178 GCWGGSPSQAWRWIQTKGICTGTDYNWKSGCKPYPFSQNQAGPAPPCKSSCTASWKTAYP 237
           GC GG P  ++ ++    +C G +Y +K+  K   F  N       CK   + S      
Sbjct: 394 GCDGGHPFYSFLYVLQNELCLGDEYKYKA--KDDMFCLNYR-----CKRKVSLS------ 440

Query: 238 QDKHMGTSSGQLYGNQATVAAIQREIQTNGPVIAVFLAYQDFMSYRSGVYFRTTNQRVGY 297
                  S G +  NQ  +A     +   GP+        DF++Y  GVY  T ++ +  
Sbjct: 441 -------SIGAVKENQLILA-----LNEVGPLSVNVGVNNDFVAYSEGVYNGTCSEELN- 487

Query: 298 HAVRVLGWG------------TQTCGSQK---------IDFWIAANSWGTGWGEAGFFKI 336
           H+V ++G+G             QT  +++         I +WI  NSW   WGE GF ++
Sbjct: 488 HSVLLVGYGQVEKTKLNYNNKIQTYNTKENSNQPDDNIIYYWIIKNSWSKKWGENGFMRL 547

Query: 337 RRGVN 341
            R  N
Sbjct: 548 SRNKN 552
>M.Javanica_Scaff2228g021528 on ABC02174  Falstatin  (Others)  [Plasmodium falciparum]
          Length = 492

 Score = 80.1 bits (196), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 49/230 (21%)

Query: 122 IQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDASLQFSALDVLTCSMQGDGCWG 181
           +++Q  CGSCWA S+  +   +Y I +           A   FS  +++ CS++ +GC+G
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIRKK----------ALFLFSEQELVDCSVKNNGCYG 333

Query: 182 GSPSQAWR-WIQTKGICTGTDYNWKSGCKPYPFSQNQAGPAPPCKSSCTASWKTAYPQDK 240
           G  + A+   I   G+C+  DY       PY  +  +      C    T     + P DK
Sbjct: 334 GYITNAFDDMIDLGGLCSQDDY-------PYVSNLPETCNLKRCNERYTIKSYVSIPDDK 386

Query: 241 HMGTSSGQLYGNQATVAAIQREIQTNGPVIAVFLAYQDFMSYRSGVYFRTTNQRVG---Y 297
                              +  ++  GP+     A  DF  YR G Y    +   G    
Sbjct: 387 ------------------FKEALRYLGPISISIAASDDFAFYRGGFY----DGECGAAPN 424

Query: 298 HAVRVLGWGTQ------TCGSQKIDFWIAANSWGTGWGEAGFFKIRRGVN 341
           HAV ++G+G +      T   +K  ++I  NSWG+ WGE G+  +    N
Sbjct: 425 HAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDEN 474
>M.Javanica_Scaff2228g021528 on XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 492

 Score = 80.1 bits (196), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 49/230 (21%)

Query: 122 IQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDASLQFSALDVLTCSMQGDGCWG 181
           +++Q  CGSCWA S+  +   +Y I +           A   FS  +++ CS++ +GC+G
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIRKK----------ALFLFSEQELVDCSVKNNGCYG 333

Query: 182 GSPSQAWR-WIQTKGICTGTDYNWKSGCKPYPFSQNQAGPAPPCKSSCTASWKTAYPQDK 240
           G  + A+   I   G+C+  DY       PY  +  +      C    T     + P DK
Sbjct: 334 GYITNAFDDMIDLGGLCSQDDY-------PYVSNLPETCNLKRCNERYTIKSYVSIPDDK 386

Query: 241 HMGTSSGQLYGNQATVAAIQREIQTNGPVIAVFLAYQDFMSYRSGVYFRTTNQRVG---Y 297
                              +  ++  GP+     A  DF  YR G Y    +   G    
Sbjct: 387 ------------------FKEALRYLGPISISIAASDDFAFYRGGFY----DGECGAAPN 424

Query: 298 HAVRVLGWGTQ------TCGSQKIDFWIAANSWGTGWGEAGFFKIRRGVN 341
           HAV ++G+G +      T   +K  ++I  NSWG+ WGE G+  +    N
Sbjct: 425 HAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDEN 474
>M.Javanica_Scaff2228g021528 on XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]
          Length = 318

 Score = 72.8 bits (177), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 31/221 (14%)

Query: 122 IQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDASLQFSALDVLTCSMQGDGCWG 181
           I++Q  CGSC++ ++ +A   R  +A +KK      +D  L    L   + S+   GC G
Sbjct: 110 IRDQASCGSCYSFASVAAIEGRLLVAGSKK---FTVDDLDLSEQQLVDCSVSVGNKGCNG 166

Query: 182 GSPSQAWRWIQTKGICTGTDYNWKSGCKPYPFSQNQAGPAPPCKSSCTASWKTAYPQDKH 241
           GS   ++R+++  GI    DY                 P    + +CT      Y + K 
Sbjct: 167 GSLLLSFRYVKLNGIMQEKDY-----------------PYVAAEETCT------YDKKKV 203

Query: 242 MGTSSGQLYGNQATVAAIQREIQTNGPVIAVFLAYQDFMSYRSGVY-FRTTNQRVGYHAV 300
               +GQ      +  A+ R         A+  +   F  Y+SG+Y  +  +     H V
Sbjct: 204 AVKITGQKLVRPGSEKALMRAAAEGPVAAAIDASGVKFQLYKSGIYNSKECSSTQLNHGV 263

Query: 301 RVLGWGTQTCGSQKIDFWIAANSWGTGWGEAGFFKIRRGVN 341
            V+G+GTQ       ++WI  NSWGT WG+ G+  + R  N
Sbjct: 264 AVVGYGTQN----GTEYWIVRNSWGTIWGDQGYVLMSRNKN 300
>M.Javanica_Scaff2228g021528 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 72.0 bits (175), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 47/225 (20%)

Query: 122 IQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDASLQFSALDVLTCSMQGDGCWG 181
           +++Q  CGSCWA S+  +   +Y I + K           +  S  +++ CS +  GC G
Sbjct: 276 VKDQKNCGSCWAFSSIGSVESQYAIRKNK----------LITLSEQELVDCSFKNYGCNG 325

Query: 182 GSPSQAWR-WIQTKGICTGTDYNWKSGCKPYPFSQNQAGPAPPC--KSSCTASWKTAYPQ 238
           G  + A+   I+  GICT  DY       PY         AP       CT  +      
Sbjct: 326 GLINNAFEDMIELGGICTDDDY-------PY------VSDAPNLCNIDRCTEKYGIK--- 369

Query: 239 DKHMGTSSGQLYGNQATVAAIQREIQTNGPVIAVFLAYQDFMSYRSGVYFRTTNQRVGYH 298
             ++     +L          +  ++  GP+        DF  Y+ G++      ++  H
Sbjct: 370 -NYLSVPDNKL----------KEALRFLGPISISVAVSDDFAFYKEGIFDGECGDQLN-H 417

Query: 299 AVRVLGWGTQ------TCGSQKIDFWIAANSWGTGWGEAGFFKIR 337
           AV ++G+G +      T   +K  ++I  NSWG  WGE GF  I 
Sbjct: 418 AVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIE 462
>M.Javanica_Scaff2228g021528 on CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 450

 Score = 72.0 bits (175), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 92/230 (40%), Gaps = 40/230 (17%)

Query: 122 IQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDASLQFSALDVLTCSMQGDGCWG 181
           +++QGQCGSCWA ST              +GQ     +  +  S   +++C     GC G
Sbjct: 141 VKDQGQCGSCWAFSTIGNI----------EGQWQVAGNPLVSLSEQMLVSCDTIDFGCGG 190

Query: 182 GSPSQAWRWIQTKG---ICTGTDYNWKSGCKPYPFSQNQAGPAPPCKSSCTASWKTAYPQ 238
           G    A+ WI       + T   Y + SG    P  Q         +     +     PQ
Sbjct: 191 GLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGH-----EIGAAITDHVDLPQ 245

Query: 239 DKHMGTSSGQLYGNQATVAAIQREIQTNGPVIAVFLAYQDFMSYRSGVYFRTTNQRVGYH 298
           D+                 AI   +  NGP +A+ +    FM Y  G+    T++++  H
Sbjct: 246 DED----------------AIAAYLAENGP-LAIAVDATSFMDYNGGILTSCTSEQLD-H 287

Query: 299 AVRVLGWGTQTCGSQKIDFWIAANSWGTGWGEAGFFKIRRGVNEVGFEQS 348
            V ++G+      S    +WI  NSW   WGE G+ +I +G N+    Q+
Sbjct: 288 GVLLVGYND----SSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQA 333
>M.Javanica_Scaff2228g021528 on XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 482

 Score = 71.6 bits (174), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 43/223 (19%)

Query: 122 IQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDASLQFSALDVLTCSMQGDGCWG 181
           +++Q  CGSCWA S+  +   +Y I + K           +  S  +++ CS +  GC G
Sbjct: 274 VKDQKNCGSCWAFSSIGSVESQYAIRKNK----------LITLSEQELVDCSFKNYGCNG 323

Query: 182 GSPSQAWR-WIQTKGICTGTDYNWKSGCKPYPFSQNQAGPAPPCKSSCTASWKTAYPQDK 240
           G  + A+   I+  GICT  DY + S             P       CT  +        
Sbjct: 324 GLINNAFEDMIELGGICTDDDYPYVSD-----------APNLCNIDRCTEKYGIK----N 368

Query: 241 HMGTSSGQLYGNQATVAAIQREIQTNGPVIAVFLAYQDFMSYRSGVYFRTTNQRVGYHAV 300
           ++     +L          +  ++  GP+        DF  Y+ G++       +  HAV
Sbjct: 369 YLSVPDNKL----------KEALRFLGPISISIAVSDDFPFYKEGIFDGECGDELN-HAV 417

Query: 301 RVLGWGTQ------TCGSQKIDFWIAANSWGTGWGEAGFFKIR 337
            ++G+G +      T   +K  ++I  NSWG  WGE GF  I 
Sbjct: 418 MLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIE 460
>M.Javanica_Scaff2228g021528 on AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 206

 Score = 57.0 bits (136), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 84/213 (39%), Gaps = 44/213 (20%)

Query: 118 IIGRIQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDASLQ-FSALDVLTCSMQG 176
           ++  IQ+QGQCGSCWA S   A   +Y I   +           LQ  S  +++ C    
Sbjct: 32  VVNPIQDQGQCGSCWAFSAIQAQESQYAITSGE-----------LQKLSEQNLVDCVTTC 80

Query: 177 DGCWGGSPSQAWRWI---QTKGICTGTDYNWKSGCKPYPFSQNQAGPAPPCKSSCTASWK 233
           DGC GG  + A+ ++   Q        DY       PY                    + 
Sbjct: 81  DGCEGGLMTNAYDYVIKYQDGKFMLENDY-------PYT----------------AYYYD 117

Query: 234 TAYPQDKHMGTSSGQLYGNQATVAAIQREIQTNGP-VIAVFLAYQDFMSYRSGVYFRTTN 292
             +  DK +      +   +     +  +I TNGP  +A+  ++  F  Y  G+Y   + 
Sbjct: 118 CLFDTDKAVSNIVSYINVVEGDENDLATKISTNGPAAVAIDASHYSFQLYSQGIYNVPSR 177

Query: 293 QRVGY-HAVRVLGWGTQTCGSQKIDFWIAANSW 324
              G  H V  +G+G +  GS K  +WI  NSW
Sbjct: 178 SSYGLDHGVGCVGYGAE--GSTK--YWIVKNSW 206
>M.Javanica_Scaff2228g021528 on CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 50.8 bits (120), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 117/286 (40%), Gaps = 66/286 (23%)

Query: 42  VKEINVKAAGIWTASVNELSRLPLAKQKILCGAKLSFELKLNKTEAEPPEFNTKAGAQCT 101
           V+E N    G +T ++N+L+ L  A+   L G       ++NK E +  + N  A A C 
Sbjct: 28  VQEHNRANLG-FTVALNKLAHLTPAEYNSLLG------FRMNKAERKAVKSNAIANADC- 79

Query: 102 TKIDFDARTKWSGCSSIIGRIQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDAS 161
                D R K       +  I++QGQCGSCWA S   A   +Y I+             +
Sbjct: 80  -----DWRKK-----GAVNPIKDQGQCGSCWAFSAIQAQESQYYISF-----------KT 118

Query: 162 LQ-FSALDVLTCSMQGDGCWGGSPSQAWRWI---QTKGICTGTDYNWKSGCKPYPFSQNQ 217
           LQ  S  +++ C     GC GG    A+ ++   Q+    T  D         YP++   
Sbjct: 119 LQSLSEQNLVDCVTTCYGCNGGLMDAAYDYVVKHQSGKFMTEAD---------YPYTARD 169

Query: 218 AGPAPPCKSSCTASWKTAYPQDKHMGTSSGQLYGN--QATVAAIQREIQTNGP-VIAVFL 274
                 CK +               GTS  + Y N  +     +  ++ T GP  IA+  
Sbjct: 170 G----SCKFNAAK------------GTSQIKSYVNVAEGDEKDLATKVSTLGPAAIAIDA 213

Query: 275 AYQDFMSYRSGVYFRTTNQRVGY-HAVRVLGWGTQTCGSQKIDFWI 319
           +   F  Y SG+Y  +        H V  +G+GT+  GS+  ++WI
Sbjct: 214 SAWSFQLYSSGIYDESACSSYNLDHGVGCVGYGTE--GSK--NYWI 255
>M.Javanica_Scaff2228g021528 on XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 49.3 bits (116), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 82/223 (36%), Gaps = 46/223 (20%)

Query: 122 IQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDASLQFSALDVLTCSMQGDGCWG 181
           I++QG CGSC+   + +A   R  I +        G+  +L  S   ++ C+ +      
Sbjct: 109 IRDQGNCGSCYTFGSIAALEGRLLIEKG-------GDSETLDLSEEHMVQCTREDGNNGC 161

Query: 182 GSPSQ--AWRWIQTKGICTGTDYNWKSGCKPYPFSQNQAGPAPPCKSSCTASWKTAYPQD 239
                   + +I   GI   +DY       PY       G    C+S   A  K      
Sbjct: 162 NGGLGSNVYNYIMENGIAKESDY-------PY------TGSDSTCRSDVKAFAKIK---- 204

Query: 240 KHMGTSSGQLYGNQATVAAIQREIQTNGPVIAVFLAYQDFMSYRSGVYFRT---TNQRVG 296
                S  ++  N      ++  I      +++  +   F  Y+SG Y       N    
Sbjct: 205 -----SYNRVARNNEV--ELKAAISQGLVDVSIDASSVQFQLYKSGAYTDKQCKNNYFAL 257

Query: 297 YHAVRVLGWGT---QTCGSQKIDFWIAANSWGTGWGEAGFFKI 336
            H V  +G+G    + C       WI  NSWGTGWGE G+  +
Sbjct: 258 NHEVCAVGYGVVDGKEC-------WIVRNSWGTGWGEKGYINM 293
>M.Javanica_Scaff2228g021528 on CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 47.8 bits (112), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 27/150 (18%)

Query: 42  VKEINVKAAGIWTASVNELSRLPLAKQKILCGAKLSFELKLNKTEAEPPEFNTKAGAQCT 101
           V+E N    G +   +N+L+ L  ++ + L GAK   +   N  + + P  +        
Sbjct: 51  VQEHNAANKG-FKLGLNKLAHLTQSEYRSLLGAKRLGQKSGNFFKCDAPANDA------- 102

Query: 102 TKIDFDARTKWSGCSSIIGRIQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDAS 161
                D R K      I+ +I++QGQCGSCWA S   A   RY  A          N   
Sbjct: 103 ----VDWRDK-----GIVNKIKDQGQCGSCWAFSAIQASESRYAQA----------NKQL 143

Query: 162 LQFSALDVLTCSMQGDGCWGGSPSQAWRWI 191
           L  +  +++ C     GC GG PS+A  ++
Sbjct: 144 LDLAEQNIVDCVTSCYGCNGGWPSKAIDYV 173
>M.Javanica_Scaff2228g021528 on AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 47.8 bits (112), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 33/165 (20%)

Query: 42  VKEINVKAAGIWTASVNELSRLPLAKQKILCGAKLSFELKLNKTEAEPPEFNTKAGAQCT 101
           V+E N    G +T ++N+L+ L  A+   L G       ++NK E +  + N  A A C 
Sbjct: 41  VQEHNRANLG-FTVALNKLAHLTPAEYNSLLG------FRMNKAERKAVKSNAIANADC- 92

Query: 102 TKIDFDARTKWSGCSSIIGRIQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDAS 161
                D R K +     +  I++QGQCGSCWA S   A   +Y I+             +
Sbjct: 93  -----DWRKKGA-----VNPIKDQGQCGSCWAFSAIQAQESQYYISF-----------KT 131

Query: 162 LQ-FSALDVLTCSMQGDGCWGGSPSQAWRWI---QTKGICTGTDY 202
           LQ  S  +++ C     GC GG    A+ ++   Q+    T  DY
Sbjct: 132 LQSLSEQNLVDCVTTCYGCNGGLMDAAYDYVVKHQSGKFMTEADY 176
>M.Javanica_Scaff2228g021528 on XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 47.4 bits (111), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 86/223 (38%), Gaps = 46/223 (20%)

Query: 122 IQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDASLQFSALDVLTCSMQGDGCWG 181
           I++Q QCGSC+   + +A   R  I +        G+  +L  S   ++ C+        
Sbjct: 109 IRDQAQCGSCYTFGSLAALEGRLLIEKG-------GDANTLDLSEEHMVQCTRDNGNNGC 161

Query: 182 GSPSQ--AWRWIQTKGICTGTDYNWKSGCKPYPFSQNQAGPAPPCKSSCTASWKTAYPQD 239
                   + +I   G+   +DY         P++ + +      KS    +  T  P++
Sbjct: 162 NGGLGSNVYDYIIEHGVAKESDY---------PYTGSDSTCKTNVKSFAKITGYTKVPRN 212

Query: 240 KHMGTSSGQLYGNQATVAAIQREIQTNGPVIAVFLAYQDFMSYRSGVYFRT---TNQRVG 296
                       N+A + A   +   +   +++  +   F  Y+SG Y  T    N    
Sbjct: 213 ------------NEAELKAALSQGLVD---VSIDASSAKFQLYKSGAYTDTKCKNNYFAL 257

Query: 297 YHAVRVLGWGT---QTCGSQKIDFWIAANSWGTGWGEAGFFKI 336
            H V  +G+G    + C       WI  NSWGTGWG+ G+  +
Sbjct: 258 NHEVCAVGYGVVDGKEC-------WIVRNSWGTGWGDKGYINM 293
>M.Javanica_Scaff2228g021528 on CAA54437  CP3  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 42.7 bits (99), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 30/166 (18%)

Query: 42  VKEINVKAAGIWTASVNELSRLPLAKQKILCGAKLSFELKLNKTEAEPPEFNTKAGAQCT 101
           V+E N   +G +  ++N LS +  ++ K+L G K     +  K E E   F         
Sbjct: 52  VQEHNRANSG-YQLTMNHLSCMTPSEYKVLLGHK-----QTKKIEGEAKIF--------- 96

Query: 102 TKIDFDARTKWSGCSSIIGRIQNQGQCGSCWAVSTASAYTDRYCIARAKKGQNSAGNDAS 161
            K D      W   + I+  I++Q QCGSCWA S       ++ +   KKGQ        
Sbjct: 97  -KGDVPDAVDWRN-AKIVNPIKDQAQCGSCWAFSVVQVQESQWAL---KKGQ-------L 144

Query: 162 LQFSALDVLTCSMQGDGCWGGSPSQAWRWI--QTKGI-CTGTDYNW 204
           L  +  +++ C     GC GG    A+ ++    KG+    TDY +
Sbjct: 145 LSLAEQNMVDCVDTCYGCDGGDEYLAYDYVIKHQKGLWMLETDYPY 190
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16793g075352
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff208g003417
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2052g020309
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23359g087656
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16844g075453
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16230g074111
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24401g089290
         (228 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22332g085979
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1735g017941
         (298 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20163g082169
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2128g020868
         (376 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21028g083757
         (192 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1915g019300
         (216 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22365g086040
         (469 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24282g089112
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff164g002846
         (214 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1940g019489
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2368g022464
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1737g017960
         (305 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18542g078986
         (192 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20370g082548
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18999g079917
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16687g075132
         (448 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17865g077572
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2459g023084
         (612 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21441g084456
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20872g083461
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18251g078385
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17584g077005
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16723g075203
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21182g084018
         (197 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19588g081089
         (243 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2010g019989
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2201g021338
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1775g018266
         (401 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17972g077806
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20524g082836
         (266 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24523g089483
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18509g078929
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21548g084633
         (217 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1739g017983
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19g000483
         (238 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17710g077271
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23420g087760
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16969g075725
         (415 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20581g082937
         (152 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20228g082279
         (193 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]            79   6e-19
AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]             79   6e-19
AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]        70   7e-16
>M.Javanica_Scaff20228g082279 on AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 78.6 bits (192), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 77/165 (46%), Gaps = 51/165 (30%)

Query: 46  IGIDLGTTYSRAGVYKNGRVEIIANDQDWDFPQDRNSVRKKCFLGS---------NVTSH 96
           +GIDLGTTYS  GV+KN  VEIIANDQ      +R +     F  +         N  + 
Sbjct: 7   VGIDLGTTYSCVGVWKNDAVEIIANDQ-----GNRTTPSYVAFTDTERLVGDAAKNQVAR 61

Query: 97  SP--TIFQ-------------------------VADKANNPHIKANVNGEIKQFAQEEIS 129
           +P  TIF                          +A   + P I+    GE K F  EE+S
Sbjct: 62  NPENTIFDAKRLIGRKFDDPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEEVS 121

Query: 130 AMVLGKMKEIAEAYLGHEHGKVEIIANDQGNRTTPSYVAFMDTER 174
           AMVLGKMKEIAEAYLG E  +  I        T P+Y  F D++R
Sbjct: 122 AMVLGKMKEIAEAYLGKEVKEAVI--------TVPAY--FNDSQR 156

 Score = 74.3 bits (181), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 34/43 (79%), Positives = 37/43 (86%)

Query: 151 VEIIANDQGNRTTPSYVAFMDTERLIGDAAKNHVAMKTSNSVF 193
           VEIIANDQGNRTTPSYVAF DTERL+GDAAKN VA    N++F
Sbjct: 26  VEIIANDQGNRTTPSYVAFTDTERLVGDAAKNQVARNPENTIF 68
>M.Javanica_Scaff20228g082279 on AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 78.6 bits (192), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 77/165 (46%), Gaps = 51/165 (30%)

Query: 46  IGIDLGTTYSRAGVYKNGRVEIIANDQDWDFPQDRNSVRKKCFLGS---------NVTSH 96
           +GIDLGTTYS  GV+KN  VEIIANDQ      +R +     F  +         N  + 
Sbjct: 7   VGIDLGTTYSCVGVWKNDAVEIIANDQ-----GNRTTPSYVAFTDTERLVGDAAKNQVAR 61

Query: 97  SP--TIFQ-------------------------VADKANNPHIKANVNGEIKQFAQEEIS 129
           +P  TIF                          +A   + P I+    GE K F  EE+S
Sbjct: 62  NPENTIFDAKRLIGRKFDDPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEEVS 121

Query: 130 AMVLGKMKEIAEAYLGHEHGKVEIIANDQGNRTTPSYVAFMDTER 174
           AMVLGKMKEIAEAYLG E  +  I        T P+Y  F D++R
Sbjct: 122 AMVLGKMKEIAEAYLGKEVKEAVI--------TVPAY--FNDSQR 156

 Score = 74.3 bits (181), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 34/43 (79%), Positives = 37/43 (86%)

Query: 151 VEIIANDQGNRTTPSYVAFMDTERLIGDAAKNHVAMKTSNSVF 193
           VEIIANDQGNRTTPSYVAF DTERL+GDAAKN VA    N++F
Sbjct: 26  VEIIANDQGNRTTPSYVAFTDTERLVGDAAKNQVARNPENTIF 68
>M.Javanica_Scaff20228g082279 on AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]
          Length = 255

 Score = 70.1 bits (170), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 32/43 (74%), Positives = 36/43 (83%)

Query: 151 VEIIANDQGNRTTPSYVAFMDTERLIGDAAKNHVAMKTSNSVF 193
           V+I+ NDQGNRTTPSYVAF +TERLIGDAAKN VA    N+VF
Sbjct: 4   VDIVPNDQGNRTTPSYVAFTETERLIGDAAKNQVARNPENTVF 46

 Score = 52.4 bits (124), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 10/67 (14%)

Query: 108 NNPHIKANVNGEIKQFAQEEISAMVLGKMKEIAEAYLGHEHGKVEIIANDQGNRTTPSYV 167
           + P I  N  GE K+F  EEISAMVL KMKEI+EAYLG +     +        T P+Y 
Sbjct: 78  DKPIISVNYLGEKKEFHAEEISAMVLQKMKEISEAYLGRQIKNAVV--------TVPAY- 128

Query: 168 AFMDTER 174
            F D++R
Sbjct: 129 -FNDSQR 134
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24242g089056
         (396 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2372g022483
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23512g087918
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21584g084701
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20117g082075
         (181 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2397g022646
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16864g075492
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1956g019605
         (162 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1894g019132
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1846g018803
         (59 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19375g080652
         (302 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff198g003311
         (273 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24044g088727
         (129 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24791g089899
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23434g087782
         (153 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20730g083205
         (215 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff185g003137
         (659 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1963g019657
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21974g085366
         (159 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2378g022524
         (336 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24498g089444
         (59 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16853g075473
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17070g075922
         (529 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23004g087104
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20545g082877
         (481 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2360g022420
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24981g090180
         (328 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16647g075032
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17463g076743
         (360 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19556g081020
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22202g085746
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2391g022605
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19252g080420
         (323 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23910g088520
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21847g085153
         (196 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff169g002905
         (1081 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19898g081681
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20204g082246
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff244g003909
         (312 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20263g082356
         (280 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2324g022160
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2029g020128
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17770g077387
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1763g018178
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1874g018991
         (176 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20295g082406
         (308 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20342g082497
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18956g079820
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16210g074069
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff224g003646
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2439g022948
         (492 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2441g022964
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21260g084154
         (292 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1957g019608
         (240 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1972g019721
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19058g080043
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17363g076536
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16618g074974
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20787g083303
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1688g017635
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18888g079677
         (59 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20793g083321
         (136 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24061g088751
         (269 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18992g079897
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19458g080825
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2331g022206
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2302g022030
         (302 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff162g002817
         (875 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1769g018225
         (211 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20058g081963
         (604 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff221g003611
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24805g089919
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19908g081701
         (184 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2466g023121
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16758g075285
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23944g088578
         (253 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20036g081926
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18813g079524
         (366 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17938g077723
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24096g088810
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff164g002836
         (203 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22868g086864
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24215g089010
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff238g003842
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18979g079869
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23400g087733
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20644g083049
         (157 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20568g082918
         (442 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2043g020232
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2248g021654
         (1843 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2225g021505
         (278 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23819g088384
         (353 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2056g020328
         (159 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2022g020085
         (289 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2044g020239
         (168 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1806g018480
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16588g074913
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1618g017082
         (170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1909g019259
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1974g019740
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2345g022313
         (260 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16275g074219
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff175g002983
         (883 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]                 44   3e-05
AAC48311  TRAP C-1  (Adhesin)  [Cryptosporidium parvum]                42   8e-05
>M.Javanica_Scaff175g002983 on XP_001351221  CTRP  (Adhesin)  [Plasmodium falciparum]
          Length = 2112

 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 97/246 (39%), Gaps = 37/246 (15%)

Query: 434  QCRPMEEYRREAQNISSSTSEDDEYKDRRECA-VSQWGSWSLCSATCGKGIRMLYTFPVK 492
            +C+       EA NI     E D+  +   C  + +W  WS CS TCG   R   TF + 
Sbjct: 1626 KCKLFNSTEMEACNIQ----ECDDNNNVDICEDIGEWSDWSSCSKTCGYSTRS-RTFTIL 1680

Query: 493  AQMF----HCHR-QTTERQFCNAKQSECGSDSDAFNSRCLVGGWTDWTEW------RMKL 541
             +      +C   + +E + C A    C SD + F        W +W EW      R ++
Sbjct: 1681 PEYIGEYPNCKIFERSETEVC-AFIPAC-SDENCFE-------WEEWNEWSSPCSPRKRV 1731

Query: 542  NIPVLLETPNRRQLS---FKIQACTVKCGRGTRSRERHLLNNSTTIKCNVELNSVEECIG 598
                +L+  +    S           K G G ++      NN  +  C  E+    + + 
Sbjct: 1732 QKARVLKKDDVIISSGDNNNNNNNNAKRGMGHKNSTFTSYNNKKSDICEEEVRHYLDKVE 1791

Query: 599  EDGEDCSIQANPFCKTTSWSDWSPCSTSCDEGVRVR---TRLFYYA--EHEQECSKSKSL 653
             D E      NP      WSDWS C  +C+ GVR+R   + +F     E E+EC +  + 
Sbjct: 1792 YDEESTCENKNP---CGDWSDWSECDRTCNVGVRIRHFISHMFDMVGDEDEKECLEYYNK 1848

Query: 654  MEKDRC 659
            +E   C
Sbjct: 1849 VETQDC 1854

 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 11/85 (12%)

Query: 768  EWSPWTECSSTCGRGKRNRHRNVKTFPRNGGNRCPPREHRIQERHCENRPCAPNS----C 823
            ++  W+ECS+TCG G R R+R+      +  ++C    +  +   C  + C  N+    C
Sbjct: 1597 DFGEWSECSATCGEGIRVRNRDNSL---DNDDKC-KLFNSTEMEACNIQECDDNNNVDIC 1652

Query: 824  R-IGRWSVWSPCSVNCGEGYQTRRR 847
              IG WS WS CS  C  GY TR R
Sbjct: 1653 EDIGEWSDWSSCSKTC--GYSTRSR 1675
>M.Javanica_Scaff175g002983 on AAC48311  TRAP C-1  (Adhesin)  [Cryptosporidium parvum]
          Length = 255

 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 758 GGPSLDCELSEWSPWTECSSTCGRGKRNRHRNVKTFPRNGGNRCPPREHRIQERHCENRP 817
           G  +  C +S WS WT CS  CG   R+R R+V +FPR     CP   H I+  +C    
Sbjct: 148 GECATTCTVSTWSSWTTCSGVCGE-MRSRTRSVLSFPRYDHEYCP---HLIEYSNCVVEN 203

Query: 818 CAPNSC 823
             P +C
Sbjct: 204 KCPENC 209
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2249g021660
         (198 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24523g089481
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2228g021532
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20656g083071
         (341 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22636g086489
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18688g079280
         (261 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1629g017165
         (324 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1870g018961
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1760g018160
         (297 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1953g019582
         (221 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20157g082155
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18158g078178
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1671g017494
         (462 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21866g085189
         (166 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23064g087203
         (163 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20338g082488
         (193 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1788g018370
         (330 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24250g089063
         (283 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18215g078301
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18678g079260
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24501g089446
         (378 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]          105   2e-26
P92132  CP2  (Cysteine protease)  [Giardia duodenalis]                 58   1e-10
AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    49   3e-07
XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium falc...    49   3e-07
ABC02174  Falstatin  (Others)  [Plasmodium falciparum]                 48   4e-07
XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium falc...    48   4e-07
PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]    43   2e-05
>M.Javanica_Scaff24501g089446 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score =  105 bits (261), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 133/300 (44%), Gaps = 45/300 (15%)

Query: 82  EEKLKLTAQRVVLINGLTNGIWTAKL-GFFSLLPDEDQKKLSGVTDIEMETVTGIETIRN 140
           E+   L+   V  +N L  GIW AK  G    +   + K+L+GV            +I  
Sbjct: 27  EDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVIKKNNNA-----SILP 81

Query: 141 KRQTSNSTKKCNYTTEFDVRDKWPKCSSFLNHVQDQAFCGGCWAISTASAYTDRHCIERD 200
           KR+ +    +    + FD  + WP C + +  + DQ+ CG CWA++ ASA +DR C    
Sbjct: 82  KRRFTEEEARAPLPSSFDSAEAWPNCPT-IPQIADQSACGSCWAVAAASAMSDRFCT--- 137

Query: 201 KKGLSTLRTANTIFSSYELLSCTSK--GSCRGGSPYKAWELIKSNGICTGSDYLGEGGCK 258
             G+  +       S+ +LL+C S     C GG P +AW    S G+   SDY     C+
Sbjct: 138 MGGVQDVH-----ISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLV--SDY-----CQ 185

Query: 259 PYPFGPKNTFPILKDCYNKCTNKTWGVPYDADRKNY----GIFHITNFISFIFSVITSGT 314
           PYPF   +     K+ Y  C+       +D  + NY        + N+ S+     TS  
Sbjct: 186 PYPFPHCSHHSKSKNGYPPCSQFN----FDTPKCNYTCDDPTIPVVNYRSW-----TSYA 236

Query: 315 LKGEQAIKDELYKNGPVVAIFNVYKDF-------YHYADGED-GVYFVIILSSKTCTNIP 366
           L+GE     EL+  GP    F+VY+DF       YH+  G+  G + V ++   T   +P
Sbjct: 237 LQGEDDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTSNGVP 296
>M.Javanica_Scaff24501g089446 on P92132  CP2  (Cysteine protease)  [Giardia duodenalis]
          Length = 255

 Score = 58.2 bits (139), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 48/240 (20%)

Query: 119 KKLSGVTDIEMET----VTGIETIRNKRQTSNSTKKCNYTTEFDVRDKWPKCSSFLNHVQ 174
           K+  G+T  E+ +    V+ ++  +        T K +    FD R+++P C   +  V 
Sbjct: 37  KRFEGLTKDEISSLLMPVSFLKNAKGAAPRGTFTDKDDVPESFDFREEYPHC---IPEVV 93

Query: 175 DQAFCGGCWAISTASAYTDRHCIER-DKKGLSTLRTANTIFSSYELLSCTSKG-SCRGGS 232
           DQ  CG CWA S+ + + DR C+   DKK +         +S   ++SC     +C GG 
Sbjct: 94  DQGGCGSCWAFSSVATFGDRRCVAGLDKKPVK--------YSPQYVVSCDHGDMACNGGW 145

Query: 233 PYKAWELIKSNGICTGSDYLGEGGCKPYPFGPKNTFPILKDCYNKCTNKTWGVPYDADRK 292
               W+ +   G  T         C PY  G      +   C  KC         D   K
Sbjct: 146 LPNVWKFLTKTGTTTDE-------CVPYKSGSTT---LRGTCPTKCA--------DGSSK 187

Query: 293 NYGIFHITNFISFIFSVITSGTLKGEQAIKDELYKNGPVVAIFNVYKDFYHYADGEDGVY 352
            + +   T++  +   +          A+   L  +GP+   F V+ DF +Y   E GVY
Sbjct: 188 VH-LATATSYKDYGLDI---------PAMMKALSTSGPLQVAFLVHSDFMYY---ESGVY 234
>M.Javanica_Scaff24501g089446 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 48.5 bits (114), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 11/81 (13%)

Query: 173 VQDQAFCGGCWAISTASAYTDRHCIERDKKGLSTLRTANTIFSSYELLSCTSKG-SCRGG 231
           V+DQ  CG CWA S+  +   ++ I ++K  L TL       S  EL+ C+ K   C GG
Sbjct: 276 VKDQKNCGSCWAFSSIGSVESQYAIRKNK--LITL-------SEQELVDCSFKNYGCNGG 326

Query: 232 SPYKAWE-LIKSNGICTGSDY 251
               A+E +I+  GICT  DY
Sbjct: 327 LINNAFEDMIELGGICTDDDY 347
>M.Javanica_Scaff24501g089446 on XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 482

 Score = 48.5 bits (114), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 11/81 (13%)

Query: 173 VQDQAFCGGCWAISTASAYTDRHCIERDKKGLSTLRTANTIFSSYELLSCTSKG-SCRGG 231
           V+DQ  CG CWA S+  +   ++ I ++K  L TL       S  EL+ C+ K   C GG
Sbjct: 274 VKDQKNCGSCWAFSSIGSVESQYAIRKNK--LITL-------SEQELVDCSFKNYGCNGG 324

Query: 232 SPYKAWE-LIKSNGICTGSDY 251
               A+E +I+  GICT  DY
Sbjct: 325 LINNAFEDMIELGGICTDDDY 345
>M.Javanica_Scaff24501g089446 on ABC02174  Falstatin  (Others)  [Plasmodium falciparum]
          Length = 492

 Score = 48.1 bits (113), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 11/81 (13%)

Query: 173 VQDQAFCGGCWAISTASAYTDRHCIERDKKGLSTLRTANTIFSSYELLSCTSKGS-CRGG 231
           V+DQA CG CWA S+  +   ++ I   KK L        +FS  EL+ C+ K + C GG
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIR--KKAL-------FLFSEQELVDCSVKNNGCYGG 334

Query: 232 SPYKAW-ELIKSNGICTGSDY 251
               A+ ++I   G+C+  DY
Sbjct: 335 YITNAFDDMIDLGGLCSQDDY 355
>M.Javanica_Scaff24501g089446 on XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 492

 Score = 48.1 bits (113), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 11/81 (13%)

Query: 173 VQDQAFCGGCWAISTASAYTDRHCIERDKKGLSTLRTANTIFSSYELLSCTSKGS-CRGG 231
           V+DQA CG CWA S+  +   ++ I   KK L        +FS  EL+ C+ K + C GG
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIR--KKAL-------FLFSEQELVDCSVKNNGCYGG 334

Query: 232 SPYKAW-ELIKSNGICTGSDY 251
               A+ ++I   G+C+  DY
Sbjct: 335 YITNAFDDMIDLGGLCSQDDY 355
>M.Javanica_Scaff24501g089446 on PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]
          Length = 569

 Score = 42.7 bits (99), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 15/103 (14%)

Query: 155 TEFDVRDKWPKCSSF-----LNHVQDQAFCGGCWAISTASAYTDRHCIERDKKGLSTLRT 209
            E D+  K P+   +     ++  +DQ  CG CWA ++     +    +++K  LS    
Sbjct: 325 NEKDIFSKVPEILDYREKGIVHEPKDQGLCGSCWAFASVGN-IESVFAKKNKNILS---- 379

Query: 210 ANTIFSSYELLSCTSKG-SCRGGSPYKAWELIKSNGICTGSDY 251
               FS  E++ C+     C GG P+ ++  +  N +C G +Y
Sbjct: 380 ----FSEQEVVDCSKDNFGCDGGHPFYSFLYVLQNELCLGDEY 418
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24122g088852
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19140g080210
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2118g020797
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22434g086137
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20579g082933
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21822g085122
         (275 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1890g019100
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24153g088902
         (170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18150g078162
         (204 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff170g002925
         (224 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19152g080239
         (232 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2177g021184
         (321 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20189g082223
         (271 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24069g088766
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1841g018765
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24589g089576
         (155 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20379g082571
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff234g003780
         (497 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18121g078103
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16307g074299
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16538g074805
         (128 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff172g002949
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1749g018073
         (336 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1790g018382
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff196g003270
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23665g088146
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2194g021280
         (1404 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22660g086522
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff161g002795
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2017g020039
         (226 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1642g017268
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2326g022177
         (243 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19529g080969
         (269 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff194g003250
         (324 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17693g077225
         (167 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24851g089983
         (243 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1621g017113
         (300 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1821g018598
         (172 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23731g088254
         (237 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19227g080375
         (87 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18555g079012
         (240 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20103g082053
         (298 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1811g018526
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1739g017981
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23065g087204
         (274 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2328g022185
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2337g022240
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1925g019378
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2174g021164
         (113 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23441g087788
         (227 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17506g076829
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24337g089184
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23701g088205
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16891g075549
         (184 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17818g077483
         (155 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22117g085608
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20247g082318
         (385 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21549g084635
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2138g020923
         (121 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16529g074784
         (154 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17535g076887
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21202g084051
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22628g086474
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2102g020665
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22400g086084
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24772g089878
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1930g019410
         (216 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16232g074118
         (559 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18025g077904
         (308 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff223g003637
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24580g089568
         (353 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff185g003134
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22676g086549
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23422g087764
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18313g078507
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24570g089560
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20888g083486
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2313g022097
         (59 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19006g079936
         (101 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18637g079177
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18395g078692
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17569g076966
         (366 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24393g089274
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2418g022791
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18293g078466
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff207g003406
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22236g085808
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff194g003246
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2427g022869
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1999g019911
         (155 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18043g077940
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18581g079067
         (270 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20523g082835
         (338 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2434g022918
         (259 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2253g021689
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22924g086966
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20902g083510
         (185 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16311g074310
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21155g083968
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17424g076656
         (210 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20879g083473
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1711g017772
         (1065 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff162g002809
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19008g079941
         (113 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16605g074949
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24996g090201
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1999g019903
         (200 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19404g080712
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24631g089645
         (212 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16326g074338
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17218g076240
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23415g087754
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1806g018482
         (319 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17889g077631
         (283 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22139g085640
         (252 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23718g088234
         (153 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17165g076128
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18198g078265
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22611g086452
         (372 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16251g074164
         (209 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22460g086186
         (128 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1994g019871
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23172g087375
         (149 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1704g017740
         (258 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20967g083630
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17016g075810
         (231 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2479g023213
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21163g083982
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16268g074203
         (321 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20345g082501
         (199 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17503g076821
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19387g080679
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24465g089388
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2339g022256
         (218 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16678g075112
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2298g021999
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20503g082791
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21799g085082
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19152g080238
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2019g020065
         (180 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2489g023290
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17551g076929
         (376 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21724g084955
         (426 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1899g019171
         (165 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1627g017155
         (575 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16559g074846
         (155 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22701g086594
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff213g003505
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20534g082858
         (109 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17380g076566
         (153 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1776g018269
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22537g086324
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17382g076570
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18283g078449
         (452 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2352g022368
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18502g078915
         (414 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17701g077249
         (207 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2420g022809
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18257g078396
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24759g089856
         (228 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff214g003521
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22471g086205
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2409g022733
         (565 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19384g080674
         (194 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2369g022466
         (800 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16607g074954
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2021g020076
         (258 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2160g021079
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21458g084480
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1889g019094
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21695g084899
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17068g075917
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2168g021123
         (131 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2454g023049
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17802g077455
         (405 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18473g078851
         (295 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22575g086398
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16207g074061
         (376 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23996g088658
         (274 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff180g003079
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20326g082455
         (215 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19701g081307
         (255 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22857g086846
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff176g003006
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24209g088999
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23717g088231
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2060g020352
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19085g080094
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2118g020799
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20232g082287
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2293g021967
         (267 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24066g088761
         (287 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16200g074042
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23505g087909
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1838g018742
         (292 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23370g087674
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2071g020429
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1892g019117
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff163g002834
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17846g077534
         (193 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1702g017723
         (212 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1660g017402
         (214 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21764g085020
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16269g074206
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16341g074373
         (180 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16945g075672
         (269 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17447g076703
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2134g020901
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2391g022608
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff180g003081
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16451g074619
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24859g090002
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20875g083469
         (437 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff174g002971
         (186 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19162g080257
         (175 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21504g084555
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24287g089116
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2305g022050
         (726 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17813g077470
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2403g022702
         (305 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24504g089452
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16422g074549
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18021g077901
         (491 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20246g082314
         (207 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2003g019948
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21168g083994
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff226g003682
         (763 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20293g082403
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2335g022233
         (166 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23458g087830
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff180g003069
         (240 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24674g089713
         (144 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21173g084003
         (377 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1872g018972
         (559 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21015g083733
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18150g078163
         (377 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16501g074722
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1976g019754
         (257 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21370g084343
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17762g077372
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2082g020503
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16211g074072
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23818g088382
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1747g018058
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1631g017177
         (226 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20612g082988
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1723g017848
         (233 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16612g074963
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19196g080319
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22238g085811
         (305 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19737g081371
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19565g081040
         (135 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2311g022087
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20314g082436
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23153g087349
         (263 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21181g084016
         (161 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2019g020067
         (156 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19354g080621
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17294g076410
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23671g088154
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2136g020910
         (450 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2301g022021
         (326 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18970g079845
         (724 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1662g017417
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2193g021274
         (525 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19370g080645
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18052g077957
         (363 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1826g018653
         (260 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22027g085447
         (278 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22864g086859
         (399 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24297g089126
         (264 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16910g075589
         (529 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1776g018270
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18090g078038
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20395g082596
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21859g085175
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19960g081790
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22458g086183
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18722g079331
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21516g084574
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23938g088565
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1725g017862
         (1180 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]           366   e-119
AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]            366   e-119
AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]       347   e-112
CAA87086  Hsp70  (Heat shock protein)  [Eimeria tenella]              229   3e-69
>M.Javanica_Scaff1725g017862 on AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score =  366 bits (939), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 182/250 (72%), Positives = 211/250 (84%), Gaps = 4/250 (1%)

Query: 47  IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLNPEN 106
           +GIDLGTTYSCVGV+KN  VEIIANDQGNR TPSYVAFT+  ERL+GDAAKNQ+  NPEN
Sbjct: 7   VGIDLGTTYSCVGVWKNDAVEIIANDQGNRTTPSYVAFTDT-ERLVGDAAKNQVARNPEN 65

Query: 107 TIFDAKRLIGREYTDKTVQDDMKLWPFGV-ADKSNKPHIKANVNGEIKQFAPEEISAMVL 165
           TIFDAKRLIGR++ D +VQ DMK WPF V A   +KP I+    GE K F PEE+SAMVL
Sbjct: 66  TIFDAKRLIGRKFDDPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEEVSAMVL 125

Query: 166 GKMKEIAEAYLGHEVTHAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIAYG 225
           GKMKEIAEAYLG EV  AV+TVPAYFND+QRQATKDAGTI+GL+V+RIINEPTAAAIAYG
Sbjct: 126 GKMKEIAEAYLGKEVKEAVITVPAYFNDSQRQATKDAGTIAGLSVLRIINEPTAAAIAYG 185

Query: 226 LDKKE-GERNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRTMEYFIKL 284
           LDKK  GE N+L+FD+GGGTFDVSLLTI++G+FEV AT GDTHLGGEDFD R +++ ++ 
Sbjct: 186 LDKKGCGEMNVLIFDMGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVDFCVQD 245

Query: 285 IKKKT-GKDL 293
            K+K  GKD+
Sbjct: 246 FKRKNRGKDI 255

 Score = 89.4 bits (220), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 83/152 (54%), Gaps = 32/152 (21%)

Query: 715 NKPDIKANVKEEIKQFAPEEISAAA------IAYGLDKKKVKEEI-----------KQFA 757
           +KP I+   + E K F PEE+SA        IA     K+VKE +           +Q  
Sbjct: 100 DKPLIEVTYQGEKKTFHPEEVSAMVLGKMKEIAEAYLGKEVKEAVITVPAYFNDSQRQAT 159

Query: 758 PE--------------EISAAAIAYGLDKKK-GKRNILVFNLGGGTLDVSLLTFDNGVSK 802
            +              E +AAAIAYGLDKK  G+ N+L+F++GGGT DVSLLT ++G+ +
Sbjct: 160 KDAGTIAGLSVLRIINEPTAAAIAYGLDKKGCGEMNVLIFDMGGGTFDVSLLTIEDGIFE 219

Query: 803 VLARNGDTRLGDEDFDQRTMEYFIKLIKNKTR 834
           V A  GDT LG EDFD R +++ ++  K K R
Sbjct: 220 VKATAGDTHLGGEDFDNRLVDFCVQDFKRKNR 251
>M.Javanica_Scaff1725g017862 on AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score =  366 bits (939), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 182/250 (72%), Positives = 211/250 (84%), Gaps = 4/250 (1%)

Query: 47  IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLNPEN 106
           +GIDLGTTYSCVGV+KN  VEIIANDQGNR TPSYVAFT+  ERL+GDAAKNQ+  NPEN
Sbjct: 7   VGIDLGTTYSCVGVWKNDAVEIIANDQGNRTTPSYVAFTDT-ERLVGDAAKNQVARNPEN 65

Query: 107 TIFDAKRLIGREYTDKTVQDDMKLWPFGV-ADKSNKPHIKANVNGEIKQFAPEEISAMVL 165
           TIFDAKRLIGR++ D +VQ DMK WPF V A   +KP I+    GE K F PEE+SAMVL
Sbjct: 66  TIFDAKRLIGRKFDDPSVQSDMKHWPFKVIAGPGDKPLIEVTYQGEKKTFHPEEVSAMVL 125

Query: 166 GKMKEIAEAYLGHEVTHAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIAYG 225
           GKMKEIAEAYLG EV  AV+TVPAYFND+QRQATKDAGTI+GL+V+RIINEPTAAAIAYG
Sbjct: 126 GKMKEIAEAYLGKEVKEAVITVPAYFNDSQRQATKDAGTIAGLSVLRIINEPTAAAIAYG 185

Query: 226 LDKKE-GERNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRTMEYFIKL 284
           LDKK  GE N+L+FD+GGGTFDVSLLTI++G+FEV AT GDTHLGGEDFD R +++ ++ 
Sbjct: 186 LDKKGCGEMNVLIFDMGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVDFCVQD 245

Query: 285 IKKKT-GKDL 293
            K+K  GKD+
Sbjct: 246 FKRKNRGKDI 255

 Score = 89.4 bits (220), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 83/152 (54%), Gaps = 32/152 (21%)

Query: 715 NKPDIKANVKEEIKQFAPEEISAAA------IAYGLDKKKVKEEI-----------KQFA 757
           +KP I+   + E K F PEE+SA        IA     K+VKE +           +Q  
Sbjct: 100 DKPLIEVTYQGEKKTFHPEEVSAMVLGKMKEIAEAYLGKEVKEAVITVPAYFNDSQRQAT 159

Query: 758 PE--------------EISAAAIAYGLDKKK-GKRNILVFNLGGGTLDVSLLTFDNGVSK 802
            +              E +AAAIAYGLDKK  G+ N+L+F++GGGT DVSLLT ++G+ +
Sbjct: 160 KDAGTIAGLSVLRIINEPTAAAIAYGLDKKGCGEMNVLIFDMGGGTFDVSLLTIEDGIFE 219

Query: 803 VLARNGDTRLGDEDFDQRTMEYFIKLIKNKTR 834
           V A  GDT LG EDFD R +++ ++  K K R
Sbjct: 220 VKATAGDTHLGGEDFDNRLVDFCVQDFKRKNR 251
>M.Javanica_Scaff1725g017862 on AAF75871  Hsp70  (Heat shock protein)  [Cryptosporidium parvum]
          Length = 255

 Score =  347 bits (889), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 175/256 (68%), Positives = 207/256 (80%), Gaps = 4/256 (1%)

Query: 63  NGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLNPENTIFDAKRLIGREYTDK 122
           N  V+I+ NDQGNR TPSYVAFTE  ERLIGDAAKNQ+  NPENT+FDAKRLIGR++ D+
Sbjct: 1   NDTVDIVPNDQGNRTTPSYVAFTET-ERLIGDAAKNQVARNPENTVFDAKRLIGRKFDDQ 59

Query: 123 TVQDDMKLWPFGVA-DKSNKPHIKANVNGEIKQFAPEEISAMVLGKMKEIAEAYLGHEVT 181
            VQ DM  WPF V     +KP I  N  GE K+F  EEISAMVL KMKEI+EAYLG ++ 
Sbjct: 60  AVQSDMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEISAMVLQKMKEISEAYLGRQIK 119

Query: 182 HAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIAYGLDKK-EGERNILVFDL 240
           +AVVTVPAYFND+QRQATKDAG I+GLNV+RIINEPTAAAIAYGLDKK  GERN+L+FDL
Sbjct: 120 NAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKGTGERNVLIFDL 179

Query: 241 GGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRTMEYFIKLIKKKT-GKDLRKDNRA 299
           GGGTFDVSLLTI++G+FEV AT GDTHLGGEDFD R +E+ ++  K+K  G DL  + RA
Sbjct: 180 GGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVEFCVQDFKRKNRGMDLTSNARA 239

Query: 300 VQKLRREVEKAKRALS 315
           +++LR + E+AKR LS
Sbjct: 240 LRRLRTQCERAKRTLS 255

 Score =  108 bits (269), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 56/102 (54%), Positives = 76/102 (74%), Gaps = 2/102 (1%)

Query: 760 EISAAAIAYGLDKK-KGKRNILVFNLGGGTLDVSLLTFDNGVSKVLARNGDTRLGDEDFD 818
           E +AAAIAYGLDKK  G+RN+L+F+LGGGT DVSLLT ++G+ +V A  GDT LG EDFD
Sbjct: 154 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFD 213

Query: 819 QRTMEYFIKLIKNKTR-KDLSKDNRAVQKLRREVEKATRALS 859
            R +E+ ++  K K R  DL+ + RA+++LR + E+A R LS
Sbjct: 214 NRLVEFCVQDFKRKNRGMDLTSNARALRRLRTQCERAKRTLS 255
>M.Javanica_Scaff1725g017862 on CAA87086  Hsp70  (Heat shock protein)  [Eimeria tenella]
          Length = 255

 Score =  229 bits (584), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 113/203 (55%), Positives = 149/203 (73%), Gaps = 4/203 (1%)

Query: 44  GTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTENGERLIGDAAKNQLTLN 103
           G ++GIDLGTT SCV V +  + +++ N +G R TPS VAFT++G+RL+G  AK Q   N
Sbjct: 57  GDVVGIDLGTTNSCVAVMEGSQPKVLENSEGMRTTPSVVAFTKDGQRLVGVVAKRQAITN 116

Query: 104 PENTIFDAKRLIGREYTDKTVQDDMKLWPFGVADKSNKPHIKANVNGEIKQFAPEEISAM 163
           PENT F  KRLIGR + ++ +  + K+ P+ V    N     A V G  K+++P +I A 
Sbjct: 117 PENTFFSTKRLIGRSFDEEAIAKERKILPYKVIRADNG---DAWVEGWGKKYSPSQIGAF 173

Query: 164 VLGKMKEIAEAYLGHEVTHAVVTVPAYFNDAQRQATKDAGTISGLNVVRIINEPTAAAIA 223
           VL KMKE AE+YLG +V  AV+TVPAYFND+QRQATKDAG I+GL+V+RIINEPTAAA+A
Sbjct: 174 VLMKMKETAESYLGRDVNQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAAALA 233

Query: 224 YGLDKKEGERNILVFDLGGGTFD 246
           YG++K++G R I V+DLGGGTFD
Sbjct: 234 YGMEKEDG-RTIAVYDLGGGTFD 255
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18629g079164
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16466g074647
         (450 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21067g083822
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2388g022578
         (166 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20628g083016
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1886g019079
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21547g084632
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2226g021515
         (1935 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24609g089608
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17529g076877
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18399g078704
         (416 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16890g075546
         (272 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24564g089548
         (170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1746g018034
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20948g083594
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff234g003786
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2196g021293
         (212 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22403g086091
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24338g089190
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22134g085634
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19430g080760
         (277 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19g000486
         (239 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17338g076489
         (227 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1900g019184
         (201 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17580g076995
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2250g021669
         (297 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21251g084135
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1928g019398
         (311 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19340g080587
         (216 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21750g084998
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2200g021329
         (348 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18216g078305
         (196 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2128g020869
         (129 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23067g087209
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20518g082823
         (129 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1909g019260
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1875g018997
         (391 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22829g086796
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18496g078905
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17840g077524
         (338 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1677g017550
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22536g086322
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24720g089796
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23241g087474
         (495 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2410g022743
         (326 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff208g003421
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22931g086974
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20894g083497
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18370g078641
         (277 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2159g021068
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21906g085244
         (301 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16344g074381
         (209 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1786g018354
         (336 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21703g084915
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21326g084269
         (696 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff197g003282
         (492 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16203g074050
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff220g003595
         (352 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22314g085943
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2503g023380
         (413 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19138g080209
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18347g078593
         (216 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23206g087424
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22294g085900
         (245 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16201g074046
         (186 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21154g083966
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18869g079635
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2251g021675
         (246 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18528g078962
         (174 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17614g077065
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19657g081228
         (266 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1776g018273
         (313 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20206g082249
         (190 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1899g019176
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17720g077292
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2381g022539
         (305 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1754g018115
         (129 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2226g021511
         (96 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2323g022153
         (59 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff244g003910
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2117g020785
         (599 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24835g089962
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17206g076220
         (97 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2232g021558
         (285 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16322g074330
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17042g075862
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1933g019428
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24493g089434
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18015g077884
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22752g086683
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21249g084131
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1780g018313
         (283 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18516g078945
         (323 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22718g086613
         (364 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21757g085010
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2129g020870
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff218g003565
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19518g080949
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22329g085974
         (357 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22606g086443
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19054g080035
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21949g085322
         (403 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1939g019478
         (247 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21464g084488
         (186 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17133g076054
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20873g083463
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19798g081499
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff162g002813
         (181 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2138g020924
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24356g089220
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22890g086900
         (238 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff249g003978
         (154 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21057g083805
         (161 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17263g076341
         (213 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q4U925  Casein kinase II alpha  (Establishment)  [Theileria annu...    48   1e-07
>M.Javanica_Scaff17263g076341 on Q4U925  Casein kinase II alpha  (Establishment)  [Theileria
           annulata]
          Length = 348

 Score = 47.8 bits (112), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 7/103 (6%)

Query: 2   HDNGVVHRDLKPENLLYFNQDDDSKIM-ISDFGLSK-TEESGIMATACGTPGYVAPEVL- 58
           H  G++HRD+KP N++    D + KI+ + D+GL++        +    T  Y  PE+L 
Sbjct: 164 HSQGIMHRDIKPHNVMI---DHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELLV 220

Query: 59  QQKPYGKAVDVWSIG-VIAYILLCGYPPFYDENDANLFAQIIK 100
             + Y  ++D+WSIG ++A I+    P FY  ++ +   +I K
Sbjct: 221 DMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAK 263
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2073g020445
         (278 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24261g089082
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20975g083654
         (232 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]           54   1e-09
P92132  CP2  (Cysteine protease)  [Giardia duodenalis]                 49   6e-08
>M.Javanica_Scaff20975g083654 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score = 53.9 bits (128), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 11/115 (9%)

Query: 84  LTAQNVAIINGRTNGIWEAKL-GFFSLLPDEDQKKLCGVFDIEIENIAGRDTSVVDTGER 142
           L+   V  +N    GIW+AK  G    +   + K+L GV  I+  N    + S++    +
Sbjct: 32  LSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGV--IKKNN----NASIL---PK 82

Query: 143 SRRQASQANCNYETEFDVRDKWPKCSPFINQVQHQGLCGSCWAISTASVYTDRHC 197
            R    +A     + FD  + WP C P I Q+  Q  CGSCWA++ AS  +DR C
Sbjct: 83  RRFTEEEARAPLPSSFDSAEAWPNC-PTIPQIADQSACGSCWAVAAASAMSDRFC 136
>M.Javanica_Scaff20975g083654 on P92132  CP2  (Cysteine protease)  [Giardia duodenalis]
          Length = 255

 Score = 48.5 bits (114), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 4/47 (8%)

Query: 158 FDVRDKWPKCSPFINQVQHQGLCGSCWAISTASVYTDRHCIER-DKK 203
           FD R+++P C P   +V  QG CGSCWA S+ + + DR C+   DKK
Sbjct: 79  FDFREEYPHCIP---EVVDQGGCGSCWAFSSVATFGDRRCVAGLDKK 122
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21348g084308
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16582g074900
         (368 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19895g081676
         (264 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23472g087854
         (209 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2499g023354
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20378g082566
         (449 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1884g019059
         (909 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff212g003488
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23155g087351
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20038g081927
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]            54   6e-11
AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]             54   6e-11
>M.Javanica_Scaff20038g081927 on AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 53.9 bits (128), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 24/28 (85%), Positives = 26/28 (92%)

Query: 47 IGIDLGTTYSCVGVYKNGRVEIIANDQG 74
          +GIDLGTTYSCVGV+KN  VEIIANDQG
Sbjct: 7  VGIDLGTTYSCVGVWKNDAVEIIANDQG 34
>M.Javanica_Scaff20038g081927 on AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 53.9 bits (128), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 24/28 (85%), Positives = 26/28 (92%)

Query: 47 IGIDLGTTYSCVGVYKNGRVEIIANDQG 74
          +GIDLGTTYSCVGV+KN  VEIIANDQG
Sbjct: 7  VGIDLGTTYSCVGVWKNDAVEIIANDQG 34
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18108g078082
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2051g020294
         (99 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24345g089201
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22099g085572
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1893g019121
         (93 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17727g077301
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22015g085429
         (113 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24068g088765
         (267 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22489g086243
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2241g021619
         (251 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1933g019422
         (283 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff197g003294
         (87 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20378g082567
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20481g082751
         (252 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24535g089507
         (310 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20855g083434
         (361 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16279g074232
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18216g078304
         (194 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff202g003347
         (1918 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2382g022543
         (239 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22165g085691
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19382g080671
         (249 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16392g074484
         (115 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17838g077521
         (170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20757g083246
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18935g079769
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20005g081876
         (186 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22632g086480
         (198 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1691g017654
         (219 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff186g003144
         (1840 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2100g020647
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20254g082329
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19726g081357
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22621g086465
         (265 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24660g089691
         (225 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22074g085523
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23114g087293
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19484g080878
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19507g080923
         (277 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]           82   6e-19
P92132  CP2  (Cysteine protease)  [Giardia duodenalis]                 62   2e-12
CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]            51   1e-08
PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]    51   3e-08
ABC02174  Falstatin  (Others)  [Plasmodium falciparum]                 48   2e-07
XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium falc...    48   2e-07
CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]        46   1e-06
AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    44   4e-06
XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium falc...    44   4e-06
XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]           42   2e-05
AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]           41   3e-05
>M.Javanica_Scaff19507g080923 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score = 82.0 bits (201), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 24/175 (13%)

Query: 71  IAQINEQNGGYWKAKVN-YYSLLPEDEQKRICGVQNNGRSKNGDGKLEFPILEKLANNDD 129
           + ++N  N G WKAK +     +   E KR+ GV     + +   K  F   E  A    
Sbjct: 37  VDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVIKKNNNASILPKRRFTEEEARAP--- 93

Query: 130 CVTEIEFDARENWPDCSSFINYIQNQGRCGSCWAVSTASAYTDRSCIQRSLNGLSTSIDD 189
                 FD+ E WP+C + I  I +Q  CGSCWAV+ ASA +DR C   ++ G+      
Sbjct: 94  --LPSSFDSAEAWPNCPT-IPQIADQSACGSCWAVAAASAMSDRFC---TMGGVQ----- 142

Query: 190 PSLHFSSTDVMSCSIDY-DGCEGGWPSKAWQWIQSNGVCTGTDHVWNNGCKPYPY 243
             +H S+ D+++C  D  DGC GG P +AW +  S G+ +       + C+PYP+
Sbjct: 143 -DVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLVS-------DYCQPYPF 189
>M.Javanica_Scaff19507g080923 on P92132  CP2  (Cysteine protease)  [Giardia duodenalis]
          Length = 255

 Score = 62.0 bits (149), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 18/106 (16%)

Query: 136 FDARENWPDCSSFINYIQNQGRCGSCWAVSTASAYTDRSCIQRSLNGLSTSIDDPSLHFS 195
           FD RE +P C   I  + +QG CGSCWA S+ + + DR C+          +D   + +S
Sbjct: 79  FDFREEYPHC---IPEVVDQGGCGSCWAFSSVATFGDRRCV--------AGLDKKPVKYS 127

Query: 196 STDVMSCSIDYDGCEGGWPSKAWQWIQSNGVCTGTDHVWNNGCKPY 241
              V+SC      C GGW    W+++   G  T       + C PY
Sbjct: 128 PQYVVSCDHGDMACNGGWLPNVWKFLTKTGTTT-------DECVPY 166
>M.Javanica_Scaff19507g080923 on CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 51.2 bits (121), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 28/151 (18%)

Query: 71  IAQINEQNGGYWKAKVNYYSLLPEDEQKRICGVQNNGRSKNGDGKLEFPILEKLANNDDC 130
           + + N  N G+ K  +N  + L + E + + G +  G+      K + P        +D 
Sbjct: 51  VQEHNAANKGF-KLGLNKLAHLTQSEYRSLLGAKRLGQKSGNFFKCDAPA-------NDA 102

Query: 131 VTEIEFDARENWPDCSSFINYIQNQGRCGSCWAVSTASAYTDRSCIQRSLNGLSTSIDDP 190
           V         +W D    +N I++QG+CGSCWA S   A   R              +  
Sbjct: 103 V---------DWRD-KGIVNKIKDQGQCGSCWAFSAIQASESR----------YAQANKQ 142

Query: 191 SLHFSSTDVMSCSIDYDGCEGGWPSKAWQWI 221
            L  +  +++ C     GC GGWPSKA  ++
Sbjct: 143 LLDLAEQNIVDCVTSCYGCNGGWPSKAIDYV 173
>M.Javanica_Scaff19507g080923 on PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]
          Length = 569

 Score = 50.8 bits (120), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 10/82 (12%)

Query: 153 QNQGRCGSCWAVSTASAYTDRSCIQRSLNGLSTSIDDPSLHFSSTDVMSCSIDYDGCEGG 212
           ++QG CGSCWA ++            ++  +    +   L FS  +V+ CS D  GC+GG
Sbjct: 349 KDQGLCGSCWAFASVG----------NIESVFAKKNKNILSFSEQEVVDCSKDNFGCDGG 398

Query: 213 WPSKAWQWIQSNGVCTGTDHVW 234
            P  ++ ++  N +C G ++ +
Sbjct: 399 HPFYSFLYVLQNELCLGDEYKY 420
>M.Javanica_Scaff19507g080923 on ABC02174  Falstatin  (Others)  [Plasmodium falciparum]
          Length = 492

 Score = 48.1 bits (113), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 22/167 (13%)

Query: 75  NEQNGGYWKAKVNYYS-LLPEDEQKRICGVQNNGRSKNGDGKLEFP-----ILEKLANND 128
           N++    +K  +N +  L PE+ + +   ++ +G  K     + +      +++K    D
Sbjct: 206 NKKTNSLYKRGMNKFGDLSPEEFRSKYLNLKTHGPFKTLSPPVSYEANYEDVIKKYKPAD 265

Query: 129 DCVTEIEFDARENWPDCSSFINYIQNQGRCGSCWAVSTASAYTDRSCIQRSLNGLSTSID 188
             +  I +D R         +  +++Q  CGSCWA S+  +   +  I++    L     
Sbjct: 266 AKLDRIAYDWR-----LHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFL----- 315

Query: 189 DPSLHFSSTDVMSCSIDYDGCEGGWPSKAW-QWIQSNGVCTGTDHVW 234
                FS  +++ CS+  +GC GG+ + A+   I   G+C+  D+ +
Sbjct: 316 -----FSEQELVDCSVKNNGCYGGYITNAFDDMIDLGGLCSQDDYPY 357
>M.Javanica_Scaff19507g080923 on XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 492

 Score = 48.1 bits (113), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 22/167 (13%)

Query: 75  NEQNGGYWKAKVNYYS-LLPEDEQKRICGVQNNGRSKNGDGKLEFP-----ILEKLANND 128
           N++    +K  +N +  L PE+ + +   ++ +G  K     + +      +++K    D
Sbjct: 206 NKKTNSLYKRGMNKFGDLSPEEFRSKYLNLKTHGPFKTLSPPVSYEANYEDVIKKYKPAD 265

Query: 129 DCVTEIEFDARENWPDCSSFINYIQNQGRCGSCWAVSTASAYTDRSCIQRSLNGLSTSID 188
             +  I +D R         +  +++Q  CGSCWA S+  +   +  I++    L     
Sbjct: 266 AKLDRIAYDWR-----LHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFL----- 315

Query: 189 DPSLHFSSTDVMSCSIDYDGCEGGWPSKAW-QWIQSNGVCTGTDHVW 234
                FS  +++ CS+  +GC GG+ + A+   I   G+C+  D+ +
Sbjct: 316 -----FSEQELVDCSVKNNGCYGGYITNAFDDMIDLGGLCSQDDYPY 357
>M.Javanica_Scaff19507g080923 on CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 450

 Score = 45.8 bits (107), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 22/150 (14%)

Query: 108 RSKNGDGKLEFPILEKLANNDDCVTEIEFDARENWPDCSSFINYIQNQGRCGSCWAVSTA 167
           R++  +G   F   +K       VT     A  +W +  + +  +++QG+CGSCWA ST 
Sbjct: 98  RARYRNGASYFAAAQKRLRKTVNVTTGRAPAAVDWREKGA-VTPVKDQGQCGSCWAFSTI 156

Query: 168 SAYTDRSCIQRSLNGLSTSIDDPSLHFSSTDVMSC-SIDYDGCEGGWPSKAWQWI-QSNG 225
                      ++ G      +P +  S   ++SC +ID+ GC GG    A+ WI  SNG
Sbjct: 157 G----------NIEGQWQVAGNPLVSLSEQMLVSCDTIDF-GCGGGLMDNAFNWIVNSNG 205

Query: 226 VCTGTDHVWNNGCKPYPYEPKGKAEQVKCE 255
                 +V+     PY     G  EQ +C+
Sbjct: 206 -----GNVFTEASYPY---VSGNGEQPQCQ 227
>M.Javanica_Scaff19507g080923 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 44.3 bits (103), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 11/84 (13%)

Query: 152 IQNQGRCGSCWAVSTASAYTDRSCIQRSLNGLSTSIDDPSLHFSSTDVMSCSIDYDGCEG 211
           +++Q  CGSCWA S+  +   +  I++  N L T         S  +++ CS    GC G
Sbjct: 276 VKDQKNCGSCWAFSSIGSVESQYAIRK--NKLIT--------LSEQELVDCSFKNYGCNG 325

Query: 212 GWPSKAWQ-WIQSNGVCTGTDHVW 234
           G  + A++  I+  G+CT  D+ +
Sbjct: 326 GLINNAFEDMIELGGICTDDDYPY 349
>M.Javanica_Scaff19507g080923 on XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 482

 Score = 44.3 bits (103), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 11/84 (13%)

Query: 152 IQNQGRCGSCWAVSTASAYTDRSCIQRSLNGLSTSIDDPSLHFSSTDVMSCSIDYDGCEG 211
           +++Q  CGSCWA S+  +   +  I++  N L T         S  +++ CS    GC G
Sbjct: 274 VKDQKNCGSCWAFSSIGSVESQYAIRK--NKLIT--------LSEQELVDCSFKNYGCNG 323

Query: 212 GWPSKAWQ-WIQSNGVCTGTDHVW 234
           G  + A++  I+  G+CT  D+ +
Sbjct: 324 GLINNAFEDMIELGGICTDDDYPY 347
>M.Javanica_Scaff19507g080923 on XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]
          Length = 318

 Score = 41.6 bits (96), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 12/127 (9%)

Query: 133 EIEFDARENWPDCSSF-----INYIQNQGRCGSCWAVSTASAYTDRSCIQRSLNGLSTSI 187
           EI +D+R + P+   +     +  I++Q  CGSC++ ++ +A   R  +  S      ++
Sbjct: 86  EIVYDSRGDVPESVDWRAKGKVPAIRDQASCGSCYSFASVAAIEGRLLVAGSKK---FTV 142

Query: 188 DDPSLHFSSTDVMSCSIDY--DGCEGGWPSKAWQWIQSNGVCTGTDHVWNNGCKPYPYEP 245
           DD  L  S   ++ CS+     GC GG    ++++++ NG+    D+ +    +   Y+ 
Sbjct: 143 DD--LDLSEQQLVDCSVSVGNKGCNGGSLLLSFRYVKLNGIMQEKDYPYVAAEETCTYDK 200

Query: 246 KGKAEQV 252
           K  A ++
Sbjct: 201 KKVAVKI 207
>M.Javanica_Scaff19507g080923 on AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 206

 Score = 40.8 bits (94), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 10/73 (13%)

Query: 149 INYIQNQGRCGSCWAVSTASAYTDRSCIQRSLNGLSTSIDDPSLHFSSTDVMSCSIDYDG 208
           +N IQ+QG+CGSCWA S   A   +  I        TS +   L  S  +++ C    DG
Sbjct: 33  VNPIQDQGQCGSCWAFSAIQAQESQYAI--------TSGELQKL--SEQNLVDCVTTCDG 82

Query: 209 CEGGWPSKAWQWI 221
           CEGG  + A+ ++
Sbjct: 83  CEGGLMTNAYDYV 95
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23932g088554
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1641g017256
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2362g022430
         (262 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23575g088009
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16739g075242
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19007g079937
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18748g079393
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16978g075738
         (59 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18234g078340
         (173 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17254g076318
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21393g084376
         (349 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2278g021859
         (383 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1636g017218
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1781g018322
         (215 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19237g080392
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1926g019385
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23434g087781
         (111 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16291g074259
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18827g079554
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19563g081035
         (332 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2453g023042
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2241g021618
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2196g021296
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20g000500
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20822g083376
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18243g078361
         (302 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17060g075897
         (120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17945g077743
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21521g084585
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2460g023087
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1875g018995
         (263 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17422g076652
         (243 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16917g075604
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23g000575
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18231g078333
         (214 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16929g075635
         (235 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18095g078055
         (156 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1960g019629
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23529g087941
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2409g022739
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21785g085057
         (172 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18336g078565
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2204g021366
         (232 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2302g022029
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18411g078725
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23150g087345
         (201 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17065g075911
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1842g018773
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16699g075159
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18799g079498
         (142 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2427g022865
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17137g076062
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24871g090019
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20324g082453
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22685g086570
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16306g074296
         (712 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1873g018980
         (345 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18788g079473
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24879g090029
         (84 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19364g080636
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]            54   2e-11
AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]             54   2e-11
>M.Javanica_Scaff19364g080636 on AAC72001   Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 54.3 bits (129), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/28 (85%), Positives = 26/28 (92%)

Query: 45 IGIDLGTTYSCVGVYKNGRVEIIANDQG 72
          +GIDLGTTYSCVGV+KN  VEIIANDQG
Sbjct: 7  VGIDLGTTYSCVGVWKNDAVEIIANDQG 34
>M.Javanica_Scaff19364g080636 on AAC72002  Hsp70  (Heat shock protein)  [Toxoplasma gondii]
          Length = 255

 Score = 54.3 bits (129), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/28 (85%), Positives = 26/28 (92%)

Query: 45 IGIDLGTTYSCVGVYKNGRVEIIANDQG 72
          +GIDLGTTYSCVGV+KN  VEIIANDQG
Sbjct: 7  VGIDLGTTYSCVGVWKNDAVEIIANDQG 34
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20727g083202
         (192 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff243g003905
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff170g002913
         (371 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2064g020370
         (216 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1730g017908
         (194 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22997g087092
         (421 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20985g083675
         (409 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1619g017095
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17740g077327
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21446g084468
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19026g079977
         (441 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2410g022745
         (259 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17114g076013
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1893g019128
         (114 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2362g022432
         (597 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2066g020386
         (380 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2421g022815
         (117 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24690g089738
         (226 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24215g089009
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19051g080030
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22484g086228
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17278g076376
         (87 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2404g022708
         (474 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22296g085903
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1694g017670
         (391 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21680g084871
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16581g074897
         (154 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16932g075643
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21677g084869
         (141 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348165  RESA  (Others)  [plasmodium falciparum]                  45   3e-07
>M.Javanica_Scaff21677g084869 on XP_001348165  RESA  (Others)  [plasmodium falciparum]
          Length = 1085

 Score = 45.1 bits (105), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 22  PKTVPTYYDILNVKKDAPRNEIVKSFRKLALKYHPDKNKAPEAKNIMQGINEAYKTLEDE 81
           P T+  YYDIL V  +A  NEI + + KLA  Y+P +       +  + +NEAY+ L D 
Sbjct: 520 PDTL--YYDILGVGVNADMNEITERYFKLAENYYPYQRSGSTVFHNFRKVNEAYQVLGDI 577

Query: 82  DKRKEYD 88
           DK++ Y+
Sbjct: 578 DKKRWYN 584
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1988g019834
         (254 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23748g088282
         (450 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16480g074675
         (135 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1954g019587
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19604g081122
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1627g017153
         (461 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2384g022561
         (65 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff212g003491
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19352g080617
         (309 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17582g076999
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18731g079348
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff224g003656
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17090g075960
         (305 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18898g079700
         (188 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18356g078610
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1776g018272
         (402 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2419g022803
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20886g083485
         (97 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17626g077093
         (154 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1981g019788
         (97 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17545g076914
         (280 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17168g076137
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17137g076064
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2451g023033
         (200 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff177g003027
         (178 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2457g023070
         (354 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff240g003870
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2281g021886
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16926g075626
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2027g020117
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2099g020638
         (527 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1896g019154
         (192 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17435g076677
         (344 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23129g087315
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16782g075329
         (319 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1939g019481
         (369 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18672g079250
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19232g080385
         (425 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16860g075482
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18626g079156
         (477 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff182g003104
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17863g077567
         (231 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20676g083112
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24625g089635
         (121 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1946g019533
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21594g084721
         (310 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2215g021447
         (255 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21985g085381
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16709g075179
         (132 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21391g084371
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23701g088203
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20492g082767
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18250g078384
         (231 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2016g020032
         (134 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1891g019104
         (195 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18052g077956
         (195 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19956g081785
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21307g084234
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16287g074249
         (426 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff25000g090206
         (165 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19451g080808
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22081g085541
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18891g079685
         (201 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19175g080282
         (198 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20203g082243
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1747g018057
         (159 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21911g085253
         (410 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21617g084762
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1939g019482
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16306g074295
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23123g087310
         (123 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22442g086155
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21739g084977
         (538 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAC43441  eIF4A  (Others)  [Toxoplasma gondii]                         88   2e-20
>M.Javanica_Scaff21739g084977 on CAC43441  eIF4A  (Others)  [Toxoplasma gondii]
          Length = 255

 Score = 87.8 bits (216), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 25/170 (14%)

Query: 41  IILAPTRELAQQIEIETHKFGDRLGIRTVSVIGGASREDQGIRMRMGVDIVIATPGRLVD 100
           +ILAPTRELAQQI+      GD L +R  + +GG    D   +++ GV +V+ TPGR+ D
Sbjct: 111 LILAPTRELAQQIQKVVLALGDYLQVRCHACVGGTVVRDDIAKLKAGVHMVVGTPGRVHD 170

Query: 101 VLENRYMSLNLCSYVIMDEADKMLDMGFEPDVTRILEFIPVTNLKPDTEEAEDENKLLEN 160
           ++E R++ ++     IMDEAD+ML  GF+  +  + + +P     PD             
Sbjct: 171 MMEKRHLRVDDMKLFIMDEADEMLSRGFKSQIYDVFKKLP-----PDV------------ 213

Query: 161 YTSKKKYRQTVMFTATMSSAVERVARQYLRRPAIVYIGSAGRPTERVEQI 210
                   Q  +F+ATM   +  +  +++R P  + + +     E + Q 
Sbjct: 214 --------QVALFSATMPQDILELTTKFMRDPKRILVKNDELTLEGIRQF 255
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21625g084780
         (204 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2397g022641
         (332 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1872g018974
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21852g085165
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2197g021303
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20918g083535
         (476 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20722g083192
         (131 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17910g077673
         (466 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18737g079362
         (382 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16841g075441
         (202 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1622g017115
         (207 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17255g076319
         (304 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2288g021919
         (494 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1672g017509
         (177 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2304g022045
         (250 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20166g082173
         (154 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20073g081998
         (219 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17181g076167
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1776g018274
         (270 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18746g079389
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2350g022349
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21938g085305
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18485g078881
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19548g081004
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18702g079302
         (442 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18134g078131
         (170 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24048g088733
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24830g089954
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18491g078899
         (51 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2497g023342
         (188 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19271g080457
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2003g019942
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2038g020208
         (244 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1945g019524
         (306 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1832g018704
         (351 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23616g088075
         (83 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1803g018460
         (87 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18874g079648
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24913g090080
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17575g076985
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24938g090116
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20557g082904
         (206 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff196g003271
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2126g020861
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2124g020849
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff248g003964
         (329 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1972g019722
         (589 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22379g086062
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18998g079913
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22817g086773
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16920g075613
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21985g085382
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20721g083191
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20994g083692
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18134g078130
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16728g075212
         (71 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1819g018585
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16917g075602
         (159 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19849g081602
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22992g087083
         (311 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18428g078756
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22234g085805
         (318 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16934g075648
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1839g018751
         (374 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]          157   8e-46
P92132  CP2  (Cysteine protease)  [Giardia duodenalis]                 95   2e-23
PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]    77   2e-16
XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium falc...    64   3e-12
AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    64   4e-12
XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]           60   3e-11
CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]        59   2e-10
ABC02174  Falstatin  (Others)  [Plasmodium falciparum]                 55   2e-09
XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium falc...    55   2e-09
CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]            52   1e-08
AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]           50   4e-08
XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]           47   6e-07
CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]            46   1e-06
CAA54437  CP3  (Cysteine protease)  [Trichomonas vaginalis]            45   2e-06
AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]            44   7e-06
XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]           43   2e-05
>M.Javanica_Scaff1839g018751 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score =  157 bits (396), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 159/353 (45%), Gaps = 66/353 (18%)

Query: 35  ARNFVEKLNGGEIGDGTWTAKYNHRFAAMPPTQRKKMQGLNGPVDGSLPRPYNLTHIAED 94
           ++ FV+++N   +  G W AKY+     +   + K++ G+                I ++
Sbjct: 33  SKAFVDRVN--RLNRGIWKAKYDGVMQNITLREAKRLNGV----------------IKKN 74

Query: 95  KTXXXXXXXXXXXXADQCTYYYEFDSRTQWPQCAKIINNIRDQSTCGDCWAVASGSAFTD 154
                           +      FDS   WP C   I  I DQS CG CWAVA+ SA +D
Sbjct: 75  NNASILPKRRFTEEEARAPLPSSFDSAEAWPNC-PTIPQIADQSACGSCWAVAAASAMSD 133

Query: 155 RYCIERAKLGLYTSPYNPRNQFSEADLMSCTPNT-FGCSGGWPLYAWQYMQTNGIVTGSN 213
           R+C       ++          S  DL++C  +   GC+GG P  AW Y  + G+V  S+
Sbjct: 134 RFCTMGGVQDVH---------ISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLV--SD 182

Query: 214 YTQYTGCKPYPFP-------------PIGTETYKAPGCSSYCTN-TNWQNNYRNDKKYAT 259
           Y     C+PYPFP             P     +  P C+  C + T    NYR+   YA 
Sbjct: 183 Y-----CQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCNYTCDDPTIPVVNYRSWTSYA- 236

Query: 260 WAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHTTGEYDGGHAIRL 319
               L G       D    E+   G       VY DF  Y+ GVY H +G+Y GGHA+RL
Sbjct: 237 ----LQGE------DDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYLGGHAVRL 286

Query: 320 IGWGTQTCDGVDQPFWIAINSWNVEWGMKGTFLIAQGNDECHIESMGISFGTP 372
           +GWGT   +GV  P+W   NSWN EWGM G FLI +G+ EC IE  G S G P
Sbjct: 287 VGWGTS--NGV--PYWKIANSWNTEWGMDGYFLIRRGSSECGIEDGG-SAGIP 334
>M.Javanica_Scaff1839g018751 on P92132  CP2  (Cysteine protease)  [Giardia duodenalis]
          Length = 255

 Score = 94.7 bits (234), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 31/208 (14%)

Query: 118 FDSRTQWPQCAKIINNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFS 177
           FD R ++P C   I  + DQ  CG CWA +S + F DR C+     GL   P     Q+ 
Sbjct: 79  FDFREEYPHC---IPEVVDQGGCGSCWAFSSVATFGDRRCVA----GLDKKPVKYSPQY- 130

Query: 178 EADLMSCTPNTFGCSGGWPLYAWQYMQTNGIVTGSNYTQYTGCKPYPFPPIGTETYKAPG 237
              ++SC      C+GGW    W+++   G  T         C PY     G+ T +   
Sbjct: 131 ---VVSCDHGDMACNGGWLPNVWKFLTKTGTTTDE-------CVPYK---SGSTTLRGT- 176

Query: 238 CSSYCTNTNWQNNYRNDKKYATWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFY 297
           C + C + + + +      Y  +        G ++   +KA + T+G +     V+SDF 
Sbjct: 177 CPTKCADGSSKVHLATATSYKDY--------GLDIPAMMKA-LSTSGPLQVAFLVHSDFM 227

Query: 298 HYSQGVYKHTTGEYDGGHAIRLIGWGTQ 325
           +Y  GVY+HT G  +GGHA+ ++G+GT 
Sbjct: 228 YYESGVYQHTYGYMEGGHAVEMVGYGTD 255
>M.Javanica_Scaff1839g018751 on PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]
          Length = 569

 Score = 77.4 bits (189), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 107/254 (42%), Gaps = 70/254 (27%)

Query: 130 IINNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQ----FSEADLMSCT 185
           I++  +DQ  CG CWA AS              +G   S +  +N+    FSE +++ C+
Sbjct: 344 IVHEPKDQGLCGSCWAFAS--------------VGNIESVFAKKNKNILSFSEQEVVDCS 389

Query: 186 PNTFGCSGGWPLYAWQYMQTNGIVTGSNYTQYTGCKPYPFPPIGTETYKAPGCSSYCTNT 245
            + FGC GG P Y++ Y+  N +  G  Y                  YKA     +C   
Sbjct: 390 KDNFGCDGGHPFYSFLYVLQNELCLGDEY-----------------KYKAKD-DMFCL-- 429

Query: 246 NWQNNYRNDKKYATWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYK 305
               NYR  +K +  + G       +++ A+  E+      VG   V +DF  YS+GVY 
Sbjct: 430 ----NYRCKRKVSLSSIGAVKEN--QLILAL-NEVGPLSVNVG---VNNDFVAYSEGVYN 479

Query: 306 HTTGEYDGGHAIRLIGWGT---------------QTCDGVDQP------FWIAINSWNVE 344
            T  E +  H++ L+G+G                 T +  +QP      +WI  NSW+ +
Sbjct: 480 GTCSE-ELNHSVLLVGYGQVEKTKLNYNNKIQTYNTKENSNQPDDNIIYYWIIKNSWSKK 538

Query: 345 WGMKGTFLIAQGND 358
           WG  G   +++  +
Sbjct: 539 WGENGFMRLSRNKN 552
>M.Javanica_Scaff1839g018751 on XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 482

 Score = 64.3 bits (155), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 56/227 (24%)

Query: 134 IRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSEADLMSCTPNTFGCSG 193
           ++DQ  CG CWA +S  +   +Y I + KL             SE +L+ C+   +GC+G
Sbjct: 274 VKDQKNCGSCWAFSSIGSVESQYAIRKNKLI----------TLSEQELVDCSFKNYGCNG 323

Query: 194 GWPLYAWQYM-QTNGIVTGSNYTQYTGCKPYPFPPIGTETYKAPGCSSY--CTNTNWQNN 250
           G    A++ M +  GI T  +Y       PY           AP   +   CT      N
Sbjct: 324 GLINNAFEDMIELGGICTDDDY-------PY--------VSDAPNLCNIDRCTEKYGIKN 368

Query: 251 YRN--DKKYATWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHTT 308
           Y +  D K                   +K  ++  G +  ++ V  DF  Y +G++    
Sbjct: 369 YLSVPDNK-------------------LKEALRFLGPISISIAVSDDFPFYKEGIFDGEC 409

Query: 309 GEYDGGHAIRLIGWGTQ------TCDGVDQPFWIAINSWNVEWGMKG 349
           G+ +  HA+ L+G+G +      T  G    ++I  NSW  +WG +G
Sbjct: 410 GD-ELNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERG 455
>M.Javanica_Scaff1839g018751 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 63.9 bits (154), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 48/223 (21%)

Query: 134 IRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSEADLMSCTPNTFGCSG 193
           ++DQ  CG CWA +S  +   +Y I + KL             SE +L+ C+   +GC+G
Sbjct: 276 VKDQKNCGSCWAFSSIGSVESQYAIRKNKLI----------TLSEQELVDCSFKNYGCNG 325

Query: 194 GWPLYAWQYM-QTNGIVTGSNYTQYTGCKPYPFPPIGTETYKAPGCSSYCTNTNWQNNYR 252
           G    A++ M +  GI T  +Y   +           TE Y   G  +Y +  +      
Sbjct: 326 GLINNAFEDMIELGGICTDDDYPYVSDAPNLCNIDRCTEKY---GIKNYLSVPD------ 376

Query: 253 NDKKYATWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHTTGEYD 312
                                + +K  ++  G +  ++ V  DF  Y +G++    G+  
Sbjct: 377 ---------------------NKLKEALRFLGPISISVAVSDDFAFYKEGIFDGECGD-Q 414

Query: 313 GGHAIRLIGWGTQ------TCDGVDQPFWIAINSWNVEWGMKG 349
             HA+ L+G+G +      T  G    ++I  NSW  +WG +G
Sbjct: 415 LNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERG 457
>M.Javanica_Scaff1839g018751 on XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]
          Length = 318

 Score = 60.5 bits (145), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 56/261 (21%)

Query: 118 FDSRTQWPQCAK-----IINNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNP 172
           +DSR   P+         +  IRDQ++CG C++ AS +A   R  +  +K          
Sbjct: 89  YDSRGDVPESVDWRAKGKVPAIRDQASCGSCYSFASVAAIEGRLLVAGSKKFTVDDL--- 145

Query: 173 RNQFSEADLMSCTPNT--FGCSGGWPLYAWQYMQTNGIVTGSNYTQYTGCKPYPFPPIGT 230
               SE  L+ C+ +    GC+GG  L +++Y++ NGI+   +Y           P +  
Sbjct: 146 --DLSEQQLVDCSVSVGNKGCNGGSLLLSFRYVKLNGIMQEKDY-----------PYVAA 192

Query: 231 ETYKAPGCSSYCTNTNWQNNYRNDKKYATWAAGLTGSTGQEVVD--AIKAEIQTNGTVVG 288
           E          CT         + KK A         TGQ++V   + KA ++       
Sbjct: 193 E--------ETCT--------YDKKKVAVKI------TGQKLVRPGSEKALMRAAAEGPV 230

Query: 289 TMYVYSD---FYHYSQGVYKHTT-GEYDGGHAIRLIGWGTQTCDGVDQPFWIAINSWNVE 344
              + +    F  Y  G+Y           H + ++G+GTQ  +G +  +WI  NSW   
Sbjct: 231 AAAIDASGVKFQLYKSGIYNSKECSSTQLNHGVAVVGYGTQ--NGTE--YWIVRNSWGTI 286

Query: 345 WGMKGTFLIAQG-NDECHIES 364
           WG +G  L+++  N++C I S
Sbjct: 287 WGDQGYVLMSRNKNNQCGIAS 307
>M.Javanica_Scaff1839g018751 on CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 450

 Score = 58.5 bits (140), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 94/231 (40%), Gaps = 41/231 (17%)

Query: 131 INNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSEADLMSCTPNTFG 190
           +  ++DQ  CG CWA      F+    IE    G +    NP    SE  L+SC    FG
Sbjct: 138 VTPVKDQGQCGSCWA------FSTIGNIE----GQWQVAGNPLVSLSEQMLVSCDTIDFG 187

Query: 191 CSGGWPLYAWQYM-QTNGIVTGSNYTQYTGCKPYPFPPIGTETYKAPGCSSYCTNTNWQN 249
           C GG    A+ ++  +NG   G+ +T+ +    YP+     E    P C         Q 
Sbjct: 188 CGGGLMDNAFNWIVNSNG---GNVFTEAS----YPYVSGNGEQ---PQC---------QM 228

Query: 250 NYRNDKKYATWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHTTG 309
           N        T    L         DAI A +  NG +   +   S F  Y+ G+    T 
Sbjct: 229 NGHEIGAAITDHVDLPQDE-----DAIAAYLAENGPLAIAVDATS-FMDYNGGILTSCTS 282

Query: 310 EYDGGHAIRLIGWGTQTCDGVDQPFWIAINSWNVEWGMKGTFLIAQGNDEC 360
           E    H + L+G+     D  + P+WI  NSW+  WG  G   I +G ++C
Sbjct: 283 E-QLDHGVLLVGYN----DSSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQC 328
>M.Javanica_Scaff1839g018751 on ABC02174  Falstatin  (Others)  [Plasmodium falciparum]
          Length = 492

 Score = 55.5 bits (132), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 83/222 (37%), Gaps = 46/222 (20%)

Query: 134 IRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSEADLMSCTPNTFGCSG 193
           ++DQ+ CG CWA +S  +   +Y I +  L L          FSE +L+ C+    GC G
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIRKKALFL----------FSEQELVDCSVKNNGCYG 333

Query: 194 GWPLYAWQYMQTNGIVTGSNYTQYTGCKPYPFPPIGTETYKAPGCSSYCTNTNWQNNYRN 253
           G+   A+  M   G +   +         YP+     ET     C+   T          
Sbjct: 334 GYITNAFDDMIDLGGLCSQD--------DYPYVSNLPETCNLKRCNERYT---------- 375

Query: 254 DKKYATWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHTTGEYDG 313
            K Y +              D  K  ++  G +  ++    DF  Y  G Y    G    
Sbjct: 376 IKSYVSIPD-----------DKFKEALRYLGPISISIAASDDFAFYRGGFYDGECGA-AP 423

Query: 314 GHAIRLIGWGTQTCDGVDQP------FWIAINSWNVEWGMKG 349
            HA+ L+G+G +     D        ++I  NSW  +WG  G
Sbjct: 424 NHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGG 465
>M.Javanica_Scaff1839g018751 on XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 492

 Score = 55.5 bits (132), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 83/222 (37%), Gaps = 46/222 (20%)

Query: 134 IRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSEADLMSCTPNTFGCSG 193
           ++DQ+ CG CWA +S  +   +Y I +  L L          FSE +L+ C+    GC G
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIRKKALFL----------FSEQELVDCSVKNNGCYG 333

Query: 194 GWPLYAWQYMQTNGIVTGSNYTQYTGCKPYPFPPIGTETYKAPGCSSYCTNTNWQNNYRN 253
           G+   A+  M   G +   +         YP+     ET     C+   T          
Sbjct: 334 GYITNAFDDMIDLGGLCSQD--------DYPYVSNLPETCNLKRCNERYT---------- 375

Query: 254 DKKYATWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHTTGEYDG 313
            K Y +              D  K  ++  G +  ++    DF  Y  G Y    G    
Sbjct: 376 IKSYVSIPD-----------DKFKEALRYLGPISISIAASDDFAFYRGGFYDGECGA-AP 423

Query: 314 GHAIRLIGWGTQTCDGVDQP------FWIAINSWNVEWGMKG 349
            HA+ L+G+G +     D        ++I  NSW  +WG  G
Sbjct: 424 NHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGG 465
>M.Javanica_Scaff1839g018751 on CAA54436  CP2  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 52.0 bits (123), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 74/183 (40%), Gaps = 43/183 (23%)

Query: 130 IINNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSEADLMSCTPNTF 189
           I+N I+DQ  CG CWA ++  A   RY     +L             +E +++ C  + +
Sbjct: 110 IVNKIKDQGQCGSCWAFSAIQASESRYAQANKQL----------LDLAEQNIVDCVTSCY 159

Query: 190 GCSGGWPLYAWQYMQTNGIVTGSNYTQYTGCKPYPFPPIGTETYKAPGCSSYCTNTNWQN 249
           GC+GGWP  A  Y      V      ++     YP+      T +   C           
Sbjct: 160 GCNGGWPSKAIDY------VVKHQAGKFMLTADYPY------TARDGTC----------- 196

Query: 250 NYRNDKKYATWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHTTG 309
                K +A+ + GLT   G + V   +AE+       G + V  D  HYS  +Y  T+G
Sbjct: 197 -----KFHASKSVGLT--KGYDEVKDTEAEL-AKAASKGVVSVCIDASHYSFQLY--TSG 246

Query: 310 EYD 312
            YD
Sbjct: 247 IYD 249
>M.Javanica_Scaff1839g018751 on AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 206

 Score = 50.1 bits (118), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 81/214 (37%), Gaps = 41/214 (19%)

Query: 130 IINNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSEADLMSCTPNTF 189
           ++N I+DQ  CG CWA ++  A   +Y I   +L           + SE +L+ C     
Sbjct: 32  VVNPIQDQGQCGSCWAFSAIQAQESQYAITSGEL----------QKLSEQNLVDCVTTCD 81

Query: 190 GCSGGWPLYAWQYMQTNGIVTGSNYTQYTGCKPYPFPPIGTETYKAPGCSSYCTNTNWQN 249
           GC GG    A+ Y      V      ++     YP+                 T   +  
Sbjct: 82  GCEGGLMTNAYDY------VIKYQDGKFMLENDYPY-----------------TAYYYDC 118

Query: 250 NYRNDKKYATWAAGLTGSTGQEVVDAIKAEIQTNG-TVVGTMYVYSDFYHYSQGVYK-HT 307
            +  DK  +   + +    G E  + +  +I TNG   V     +  F  YSQG+Y   +
Sbjct: 119 LFDTDKAVSNIVSYINVVEGDE--NDLATKISTNGPAAVAIDASHYSFQLYSQGIYNVPS 176

Query: 308 TGEYDGGHAIRLIGWGTQTCDGVDQPFWIAINSW 341
              Y   H +  +G+G +        +WI  NSW
Sbjct: 177 RSSYGLDHGVGCVGYGAEG----STKYWIVKNSW 206
>M.Javanica_Scaff1839g018751 on XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 47.0 bits (110), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 120/324 (37%), Gaps = 60/324 (18%)

Query: 51  TWTAKYNHRFAAMPPTQRKKMQGLN----------GPVDGSLPRPYNLTHIAEDKTXXXX 100
           TW +K N  F A+   +R+ +  +N          G    S+  P+      E +T    
Sbjct: 18  TWASKNNKHFTAIEKLRRRAIFNMNAKFVDSFNKIGSFKLSVDGPFAAMTNEEYRTLLKS 77

Query: 101 XXXXXXXXADQCTYY-YEFDSRTQWPQCAKIINNIRDQSTCGDCWAVASGSAFTDRYCIE 159
                     Q  Y   +      W +  K+   IRDQ+ CG C+   S +A   R  IE
Sbjct: 78  KRTTEENG--QVKYLNIQAPESVDWRKEGKV-TPIRDQAQCGSCYTFGSLAALEGRLLIE 134

Query: 160 RAKLGLYTSPYNPRNQFSEADLMSCTPN--TFGCSGGWPLYAWQYMQTNGIVTGSNYTQY 217
           +          N  +  SE  ++ CT +    GC+GG     + Y+  +G+   S+Y   
Sbjct: 135 KG------GDANTLD-LSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEHGVAKESDY--- 184

Query: 218 TGCKPYPFPPIGTETYKAPGCSSYCTNTNWQNNYRNDKKYATWAAGLTGSTGQEVVDAIK 277
                   P  G+++       S+   T +    RN++  A   A L+       +DA  
Sbjct: 185 --------PYTGSDSTCKTNVKSFAKITGYTKVPRNNE--AELKAALSQGLVDVSIDASS 234

Query: 278 AEIQTNGTVVGTMYVYSDFYHYSQGVYKHTTGE---YDGGHAIRLIGWGTQTCDGVDQPF 334
           A+ Q                 Y  G Y  T  +   +   H +  +G+G    DG  +  
Sbjct: 235 AKFQL----------------YKSGAYTDTKCKNNYFALNHEVCAVGYG--VVDG--KEC 274

Query: 335 WIAINSWNVEWGMKGTF-LIAQGN 357
           WI  NSW   WG KG   ++ +GN
Sbjct: 275 WIVRNSWGTGWGDKGYINMVIEGN 298
>M.Javanica_Scaff1839g018751 on CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 45.8 bits (107), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 78/210 (37%), Gaps = 45/210 (21%)

Query: 131 INNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSEADLMSCTPNTFG 190
           +N I+DQ  CG CWA ++  A   +Y I           +      SE +L+ C    +G
Sbjct: 87  VNPIKDQGQCGSCWAFSAIQAQESQYYI----------SFKTLQSLSEQNLVDCVTTCYG 136

Query: 191 CSGGWPLYAWQYM---QTNGIVTGSNYTQYTGCKPYPFPPIGTETYKAPGCSSYCTNTNW 247
           C+GG    A+ Y+   Q+   +T ++Y       PY       +   A G S        
Sbjct: 137 CNGGLMDAAYDYVVKHQSGKFMTEADY-------PYTARDGSCKFNAAKGTSQI------ 183

Query: 248 QNNYRNDKKYATWAAGLTGSTGQEVVDAIKAEIQTNGTVVGTMYVYSDFYHYSQGVYKHT 307
                  K Y   A G       +V     A I  + +          F  YS G+Y  +
Sbjct: 184 -------KSYVNVAEGDEKDLATKVSTLGPAAIAIDASAW-------SFQLYSSGIYDES 229

Query: 308 T-GEYDGGHAIRLIGWGTQTCDGVDQPFWI 336
               Y+  H +  +G+GT+      + +WI
Sbjct: 230 ACSSYNLDHGVGCVGYGTEG----SKNYWI 255
>M.Javanica_Scaff1839g018751 on CAA54437  CP3  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 45.4 bits (106), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 10/76 (13%)

Query: 128 AKIINNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSEADLMSCTPN 187
           AKI+N I+DQ+ CG CWA +       ++ +++ +L             +E +++ C   
Sbjct: 109 AKIVNPIKDQAQCGSCWAFSVVQVQESQWALKKGQL----------LSLAEQNMVDCVDT 158

Query: 188 TFGCSGGWPLYAWQYM 203
            +GC GG    A+ Y+
Sbjct: 159 CYGCDGGDEYLAYDYV 174
>M.Javanica_Scaff1839g018751 on AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 43.5 bits (101), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 13/87 (14%)

Query: 131 INNIRDQSTCGDCWAVASGSAFTDRYCIERAKLGLYTSPYNPRNQFSEADLMSCTPNTFG 190
           +N I+DQ  CG CWA ++  A   +Y I           +      SE +L+ C    +G
Sbjct: 100 VNPIKDQGQCGSCWAFSAIQAQESQYYI----------SFKTLQSLSEQNLVDCVTTCYG 149

Query: 191 CSGGWPLYAWQYM---QTNGIVTGSNY 214
           C+GG    A+ Y+   Q+   +T ++Y
Sbjct: 150 CNGGLMDAAYDYVVKHQSGKFMTEADY 176
>M.Javanica_Scaff1839g018751 on XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 42.7 bits (99), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/322 (21%), Positives = 117/322 (36%), Gaps = 56/322 (17%)

Query: 51  TWTAKYNHRFAAMPPTQRKKMQGLNGPV--DGSLPRPYNLT------HIAEDKTXXXXXX 102
           TW A  N  F A+   +R+ +  +N  +  + +    + L+       +  ++       
Sbjct: 18  TWVANNNKHFTAVESLRRRAIFNMNARIVAENNRKETFKLSVDGPFAAMTNEEYNSLLKL 77

Query: 103 XXXXXXADQCTYY-YEFDSRTQWPQCAKIINNIRDQSTCGDCWAVASGSAFTDRYCIERA 161
                   +  Y   +      W +  K+   IRDQ  CG C+   S +A   R  IE+ 
Sbjct: 78  KRSGEEKGEVRYLNIQAPKAVDWRKKGKV-TPIRDQGNCGSCYTFGSIAALEGRLLIEKG 136

Query: 162 KLGLYTSPYNPRNQFSEADLMSCTPN--TFGCSGGWPLYAWQYMQTNGIVTGSNYTQYTG 219
                    +     SE  ++ CT      GC+GG     + Y+  NGI   S+Y     
Sbjct: 137 -------GDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMENGIAKESDY----- 184

Query: 220 CKPYPFPPIGTETYKAPGCSSYCTNTNWQNNYRNDKKYATWAAGLTGSTGQEVVDAIKAE 279
                 P  G+++       ++    ++    RN++        L  +  Q +VD     
Sbjct: 185 ------PYTGSDSTCRSDVKAFAKIKSYNRVARNNE------VELKAAISQGLVD----- 227

Query: 280 IQTNGTVVGTMYVYSDFYHYSQGVY--KHTTGEYDG-GHAIRLIGWGTQTCDGVDQPFWI 336
           +  + + V        F  Y  G Y  K     Y    H +  +G+G    DG  +  WI
Sbjct: 228 VSIDASSV-------QFQLYKSGAYTDKQCKNNYFALNHEVCAVGYGV--VDG--KECWI 276

Query: 337 AINSWNVEWGMKGTF-LIAQGN 357
             NSW   WG KG   ++ +GN
Sbjct: 277 VRNSWGTGWGEKGYINMVIEGN 298
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20603g082969
         (176 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16232g074117
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20186g082213
         (420 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2315g022109
         (145 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2221g021479
         (136 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2111g020735
         (284 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2027g020118
         (59 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24476g089403
         (112 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18759g079423
         (352 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]          144   3e-41
P92132  CP2  (Cysteine protease)  [Giardia duodenalis]                 93   7e-23
PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]    96   1e-22
ABC02174  Falstatin  (Others)  [Plasmodium falciparum]                 83   2e-18
XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium falc...    83   2e-18
XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium falc...    80   1e-17
AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium falcipa...    80   1e-17
XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]           71   7e-15
CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]        70   2e-14
AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]           53   3e-09
XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]           49   2e-07
CAA38278  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]          43   6e-07
EAN83733  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]          42   2e-06
AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]            42   2e-05
CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]            42   2e-05
XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]           40   8e-05
>M.Javanica_Scaff18759g079423 on AAR88085  TbcatB  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 340

 Score =  144 bits (363), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 124/259 (47%), Gaps = 38/259 (14%)

Query: 102 EFDARTKWPGCKSIIDYVQHQGYCGSCWAHSAASAYTDRHCIELLKKVSSIPNNASYTFS 161
            FD+   WP C +I   +  Q  CGSCWA +AASA +DR C   +  V  +        S
Sbjct: 97  SFDSAEAWPNCPTIPQ-IADQSACGSCWAVAAASAMSDRFCT--MGGVQDV------HIS 147

Query: 162 AYDLLSCSKE--NGCDGGRAVEAYRWIEKNGICTGTDFPRKDGCKPYPFA---------- 209
           A DLL+C  +  +GC+GG    A+ +    G+ +       D C+PYPF           
Sbjct: 148 AGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLVS-------DYCQPYPFPHCSHHSKSKN 200

Query: 210 --PTVKEPKLEGCKKNLALTQDGDQLILLIENTMALKDVGAVGGEANIEKQLKNGPVSAA 267
             P   +   +  K N       D   + + N  +       G +  + +    GP   A
Sbjct: 201 GYPPCSQFNFDTPKCNYTC----DDPTIPVVNYRSWTSYALQGEDDYMRELFFRGPFEVA 256

Query: 268 FVVYEDFNAYTDGVYRHVTGKVKGGHAVVIVGYGTATCNKEKIPFWIIRNSWGPKWGKGG 327
           F VYEDF AY  GVY HV+G+  GGHAV +VG+GT+      +P+W I NSW  +WG  G
Sbjct: 257 FDVYEDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTSN----GVPYWKIANSWNTEWGMDG 312

Query: 328 FFYIRRGKDECNIETRGIA 346
           +F IRRG  EC IE  G A
Sbjct: 313 YFLIRRGSSECGIEDGGSA 331
>M.Javanica_Scaff18759g079423 on P92132  CP2  (Cysteine protease)  [Giardia duodenalis]
          Length = 255

 Score = 92.8 bits (229), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 98/202 (48%), Gaps = 28/202 (13%)

Query: 103 FDARTKWPGCKSIIDYVQHQGYCGSCWAHSAASAYTDRHCIELLKKVSSIPNNASYTFSA 162
           FD R ++P C   I  V  QG CGSCWA S+ + + DR C+  L K           +S 
Sbjct: 79  FDFREEYPHC---IPEVVDQGGCGSCWAFSSVATFGDRRCVAGLDK-------KPVKYSP 128

Query: 163 YDLLSCSK-ENGCDGGRAVEAYRWIEKNGICTGTDFPRKDGCKPYPFAPTVKEPKLEG-C 220
             ++SC   +  C+GG     ++++ K G  T       D C PY    T     L G C
Sbjct: 129 QYVVSCDHGDMACNGGWLPNVWKFLTKTGTTT-------DECVPYKSGSTT----LRGTC 177

Query: 221 KKNLALTQDGDQLILLIENTMALKDVGAVGGEANIEKQLKNGPVSAAFVVYEDFNAYTDG 280
               A   DG   + L   T + KD G +   A ++    +GP+  AF+V+ DF  Y  G
Sbjct: 178 PTKCA---DGSSKVHLATAT-SYKDYG-LDIPAMMKALSTSGPLQVAFLVHSDFMYYESG 232

Query: 281 VYRHVTGKVKGGHAVVIVGYGT 302
           VY+H  G ++GGHAV +VGYGT
Sbjct: 233 VYQHTYGYMEGGHAVEMVGYGT 254
>M.Javanica_Scaff18759g079423 on PF14_0553  Falcipain1  (Cysteine protease)  [Plasmodium falciparum]
          Length = 569

 Score = 95.5 bits (236), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 117/254 (46%), Gaps = 65/254 (25%)

Query: 113 KSIIDYVQHQGYCGSCWAHSAASAYTDRHCIELLKKVSSIPNNASYTFSAYDLLSCSKEN 172
           K I+   + QG CGSCWA ++            ++ V +  N    +FS  +++ CSK+N
Sbjct: 342 KGIVHEPKDQGLCGSCWAFASVGN---------IESVFAKKNKNILSFSEQEVVDCSKDN 392

Query: 173 -GCDGGRAVEAYRWIEKNGICTGTDFPRKDGCKPYPFAPTVKEPKLEGCKKNLALTQDG- 230
            GCDGG    ++ ++ +N +C G ++  K   K   F    +      CK+ ++L+  G 
Sbjct: 393 FGCDGGHPFYSFLYVLQNELCLGDEYKYK--AKDDMFCLNYR------CKRKVSLSSIGA 444

Query: 231 ---DQLILLIENTMALKDVGAVGGEANIEKQLKNGPVSAAFVVYEDFNAYTDGVYRHVTG 287
              +QLIL      AL +VG               P+S    V  DF AY++GVY     
Sbjct: 445 VKENQLIL------ALNEVG---------------PLSVNVGVNNDFVAYSEGVYNGTCS 483

Query: 288 KVKGGHAVVIVGYGTA------------TCNKEK---------IPFWIIRNSWGPKWGKG 326
           + +  H+V++VGYG              T N ++         I +WII+NSW  KWG+ 
Sbjct: 484 E-ELNHSVLLVGYGQVEKTKLNYNNKIQTYNTKENSNQPDDNIIYYWIIKNSWSKKWGEN 542

Query: 327 GFFYIRRGKDECNI 340
           GF  + R K+  N+
Sbjct: 543 GFMRLSRNKNGDNV 556
>M.Javanica_Scaff18759g079423 on ABC02174  Falstatin  (Others)  [Plasmodium falciparum]
          Length = 492

 Score = 82.8 bits (203), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 96/228 (42%), Gaps = 47/228 (20%)

Query: 119 VQHQGYCGSCWAHSAASAYTDRHCIELLKKVSSIPNNASYTFSAYDLLSCS-KENGCDGG 177
           V+ Q  CGSCWA S+  +   ++ I            A + FS  +L+ CS K NGC GG
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIR---------KKALFLFSEQELVDCSVKNNGCYGG 334

Query: 178 RAVEAYR-WIEKNGICTGTDFPRKDGCKPYPFAPTVKEP-KLEGCKKNLALTQDGDQLIL 235
               A+   I+  G+C+  D         YP+   + E   L+ C +   +         
Sbjct: 335 YITNAFDDMIDLGGLCSQDD---------YPYVSNLPETCNLKRCNERYTI--------- 376

Query: 236 LIENTMALKDVGAVGGEANIEKQLKNGPVSAAFVVYEDFNAYTDGVYRHVTGKVKGGHAV 295
                   K   ++  +   E     GP+S +    +DF  Y  G Y    G     HAV
Sbjct: 377 --------KSYVSIPDDKFKEALRYLGPISISIAASDDFAFYRGGFYDGECGAAPN-HAV 427

Query: 296 VIVGYGTA------TCNKEKIPFWIIRNSWGPKWGKGGFFYIRRGKDE 337
           ++VGYG        T   EK  ++II+NSWG  WG+GG  YI    DE
Sbjct: 428 ILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGG--YINLETDE 473
>M.Javanica_Scaff18759g079423 on XP_001347836  Falcipain 2  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 492

 Score = 82.8 bits (203), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 96/228 (42%), Gaps = 47/228 (20%)

Query: 119 VQHQGYCGSCWAHSAASAYTDRHCIELLKKVSSIPNNASYTFSAYDLLSCS-KENGCDGG 177
           V+ Q  CGSCWA S+  +   ++ I            A + FS  +L+ CS K NGC GG
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIR---------KKALFLFSEQELVDCSVKNNGCYGG 334

Query: 178 RAVEAYR-WIEKNGICTGTDFPRKDGCKPYPFAPTVKEP-KLEGCKKNLALTQDGDQLIL 235
               A+   I+  G+C+  D         YP+   + E   L+ C +   +         
Sbjct: 335 YITNAFDDMIDLGGLCSQDD---------YPYVSNLPETCNLKRCNERYTI--------- 376

Query: 236 LIENTMALKDVGAVGGEANIEKQLKNGPVSAAFVVYEDFNAYTDGVYRHVTGKVKGGHAV 295
                   K   ++  +   E     GP+S +    +DF  Y  G Y    G     HAV
Sbjct: 377 --------KSYVSIPDDKFKEALRYLGPISISIAASDDFAFYRGGFYDGECGAAPN-HAV 427

Query: 296 VIVGYGTA------TCNKEKIPFWIIRNSWGPKWGKGGFFYIRRGKDE 337
           ++VGYG        T   EK  ++II+NSWG  WG+GG  YI    DE
Sbjct: 428 ILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGG--YINLETDE 473
>M.Javanica_Scaff18759g079423 on XP_001347833  Falcipain 3  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 482

 Score = 80.5 bits (197), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 45/223 (20%)

Query: 119 VQHQGYCGSCWAHSAASAYTDRHCIELLKKVSSIPNNASYTFSAYDLLSCSKEN-GCDGG 177
           V+ Q  CGSCWA S+  +   ++ I           N   T S  +L+ CS +N GC+GG
Sbjct: 274 VKDQKNCGSCWAFSSIGSVESQYAIR---------KNKLITLSEQELVDCSFKNYGCNGG 324

Query: 178 RAVEAYR-WIEKNGICTGTDFPRKDGCKPYPFAPTVKEPKLEGCKKNLALTQDGDQLILL 236
               A+   IE  GICT  D+P          AP +       C  +    + G      
Sbjct: 325 LINNAFEDMIELGGICTDDDYPYVSD------APNL-------CNIDRCTEKYG------ 365

Query: 237 IENTMALKDVGAVGGEANIEKQLKN-GPVSAAFVVYEDFNAYTDGVYRHVTGKVKGGHAV 295
           I+N +++ D         +++ L+  GP+S +  V +DF  Y +G++    G  +  HAV
Sbjct: 366 IKNYLSVPD-------NKLKEALRFLGPISISIAVSDDFPFYKEGIFDGECGD-ELNHAV 417

Query: 296 VIVGYGTA------TCNKEKIPFWIIRNSWGPKWGKGGFFYIR 332
           ++VG+G        T   EK  ++II+NSWG +WG+ GF  I 
Sbjct: 418 MLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIE 460
>M.Javanica_Scaff18759g079423 on AAX77225  Falcipain 2'  (Cysteine protease)  [Plasmodium
           falciparum]
          Length = 484

 Score = 80.5 bits (197), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 45/223 (20%)

Query: 119 VQHQGYCGSCWAHSAASAYTDRHCIELLKKVSSIPNNASYTFSAYDLLSCSKEN-GCDGG 177
           V+ Q  CGSCWA S+  +   ++ I           N   T S  +L+ CS +N GC+GG
Sbjct: 276 VKDQKNCGSCWAFSSIGSVESQYAIR---------KNKLITLSEQELVDCSFKNYGCNGG 326

Query: 178 RAVEAYR-WIEKNGICTGTDFPRKDGCKPYPFAPTVKEPKLEGCKKNLALTQDGDQLILL 236
               A+   IE  GICT  D+P          AP +       C  +    + G      
Sbjct: 327 LINNAFEDMIELGGICTDDDYPYVSD------APNL-------CNIDRCTEKYG------ 367

Query: 237 IENTMALKDVGAVGGEANIEKQLKN-GPVSAAFVVYEDFNAYTDGVYRHVTGKVKGGHAV 295
           I+N +++ D         +++ L+  GP+S +  V +DF  Y +G++    G  +  HAV
Sbjct: 368 IKNYLSVPD-------NKLKEALRFLGPISISVAVSDDFAFYKEGIFDGECGD-QLNHAV 419

Query: 296 VIVGYGTA------TCNKEKIPFWIIRNSWGPKWGKGGFFYIR 332
           ++VG+G        T   EK  ++II+NSWG +WG+ GF  I 
Sbjct: 420 MLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIE 462
>M.Javanica_Scaff18759g079423 on XP_650937  CP5  (Cysteine protease)  [Entamoeba histolytica]
          Length = 318

 Score = 71.2 bits (173), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 109/264 (41%), Gaps = 42/264 (15%)

Query: 94  INKITYNIEFDARTKWPG-----CKSIIDYVQHQGYCGSCWAHSAASAYTDRHCIELLKK 148
           I+K    I +D+R   P       K  +  ++ Q  CGSC++ ++ +A   R  +   KK
Sbjct: 80  IDKQHEEIVYDSRGDVPESVDWRAKGKVPAIRDQASCGSCYSFASVAAIEGRLLVAGSKK 139

Query: 149 VSSIPNNASYTFSAYDLLSCS---KENGCDGGRAVEAYRWIEKNGICTGTDFPRKDGCKP 205
            +          S   L+ CS      GC+GG  + ++R+++ NGI    D+P       
Sbjct: 140 FTV----DDLDLSEQQLVDCSVSVGNKGCNGGSLLLSFRYVKLNGIMQEKDYPY------ 189

Query: 206 YPFAPTVKEPKLEGCKKNLALTQDGDQLILLIENTMALKDVGAVGGEANIEKQLKNGPVS 265
                   E      KK +A+   G +L+        ++        A I+         
Sbjct: 190 -----VAAEETCTYDKKKVAVKITGQKLVRPGSEKALMRAAAEGPVAAAID--------- 235

Query: 266 AAFVVYEDFNAYTDGVYRHVT-GKVKGGHAVVIVGYGTATCNKEKIPFWIIRNSWGPKWG 324
           A+ V    F  Y  G+Y        +  H V +VGYGT    +    +WI+RNSWG  WG
Sbjct: 236 ASGV---KFQLYKSGIYNSKECSSTQLNHGVAVVGYGT----QNGTEYWIVRNSWGTIWG 288

Query: 325 KGGFFYIRRGK-DECNIETRGIAY 347
             G+  + R K ++C I + G AY
Sbjct: 289 DQGYVLMSRNKNNQCGIAS-GAAY 311
>M.Javanica_Scaff18759g079423 on CAC67416  Brucipain  (Cysteine proteases)  [Trypanosoma brucei]
          Length = 450

 Score = 70.5 bits (171), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 92/230 (40%), Gaps = 40/230 (17%)

Query: 113 KSIIDYVQHQGYCGSCWAHSAASAYTDRHCIELLKKVSSIPNNASYTFSAYDLLSCSK-E 171
           K  +  V+ QG CGSCWA S          I  ++    +  N   + S   L+SC   +
Sbjct: 135 KGAVTPVKDQGQCGSCWAFST---------IGNIEGQWQVAGNPLVSLSEQMLVSCDTID 185

Query: 172 NGCDGGRAVEAYRWI-EKNG--ICTGTDFPRKDGCKPYPFAPTVKEPKLEGCKKNLALTQ 228
            GC GG    A+ WI   NG  + T   +P   G    P               ++ L Q
Sbjct: 186 FGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQ 245

Query: 229 DGDQLILLIENTMALKDVGAVGGEANIEKQLKNGPVSAAFVVYEDFNAYTDGVYRHVTGK 288
           D D +   +                      +NGP++ A V    F  Y  G+    T +
Sbjct: 246 DEDAIAAYLA---------------------ENGPLAIA-VDATSFMDYNGGILTSCTSE 283

Query: 289 VKGGHAVVIVGYGTATCNKEKIPFWIIRNSWGPKWGKGGFFYIRRGKDEC 338
            +  H V++VGY     +    P+WII+NSW   WG+ G+  I +G ++C
Sbjct: 284 -QLDHGVLLVGYN----DSSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQC 328
>M.Javanica_Scaff18759g079423 on AAS38514  CP65  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 206

 Score = 53.1 bits (126), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 44/214 (20%)

Query: 113 KSIIDYVQHQGYCGSCWAHSAASAYTDRHCI---ELLKKVSSIPNNASYTFSAYDLLSC- 168
           K +++ +Q QG CGSCWA SA  A   ++ I   EL K             S  +L+ C 
Sbjct: 30  KGVVNPIQDQGQCGSCWAFSAIQAQESQYAITSGELQK------------LSEQNLVDCV 77

Query: 169 SKENGCDGGRAVEAYRWIEKNGICTGTDFPRKDGCKPYPFAPTVKEPKLEGCKKNLALTQ 228
           +  +GC+GG    AY ++ K     G      D    YP+     +   +  K       
Sbjct: 78  TTCDGCEGGLMTNAYDYVIK--YQDGKFMLEND----YPYTAYYYDCLFDTDKA------ 125

Query: 229 DGDQLILLIENTMALKDVGAVGGEANIEKQLK-NGPVSAAF-VVYEDFNAYTDGVYRHVT 286
                   + N ++  +V   G E ++  ++  NGP + A    +  F  Y+ G+Y   +
Sbjct: 126 --------VSNIVSYINV-VEGDENDLATKISTNGPAAVAIDASHYSFQLYSQGIYNVPS 176

Query: 287 GKVKG-GHAVVIVGYGTATCNKEKIPFWIIRNSW 319
               G  H V  VGYG     K    +WI++NSW
Sbjct: 177 RSSYGLDHGVGCVGYGAEGSTK----YWIVKNSW 206
>M.Javanica_Scaff18759g079423 on XP_650156  CP1  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 48.9 bits (115), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 118/274 (43%), Gaps = 43/274 (15%)

Query: 78  SISQEE---LLRIAQNVADINKITY-NIEFDARTKWPGCKSIIDYVQHQGYCGSCWAHSA 133
           +++ EE   LL++ ++  +  ++ Y NI+      W   K  +  ++ QG CGSC+   +
Sbjct: 65  AMTNEEYNSLLKLKRSGEEKGEVRYLNIQAPKAVDWRK-KGKVTPIRDQGNCGSCYTFGS 123

Query: 134 ASAYTDRHCIELLKKVSSIPNNASYTFSAYDLLSCSKENGCDGGRAVE---AYRWIEKNG 190
            +A   R  IE         ++ +   S   ++ C++E+G +G         Y +I +NG
Sbjct: 124 IAALEGRLLIE------KGGDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMENG 177

Query: 191 ICTGTDFPRKDGCKPYPFAPTVKEPKLEGCKKNLALTQDGDQLILLIENTMALKDVGAVG 250
           I   +D+P       Y  + +     ++   K  +  +      +   N + LK      
Sbjct: 178 IAKESDYP-------YTGSDSTCRSDVKAFAKIKSYNR------VARNNEVELK------ 218

Query: 251 GEANIEKQLKNGPVSAAFVVYEDFN--AYTDGVYRHVTGKVKGGHAVVIVGYGTATCNKE 308
             A I + L +  + A+ V ++ +   AYTD   ++    +   H V  VGYG      +
Sbjct: 219 --AAISQGLVDVSIDASSVQFQLYKSGAYTDKQCKNNYFALN--HEVCAVGYGVV----D 270

Query: 309 KIPFWIIRNSWGPKWGKGGFFYIRRGKDECNIET 342
               WI+RNSWG  WG+ G+  +    + C + T
Sbjct: 271 GKECWIVRNSWGTGWGEKGYINMVIEGNTCGVAT 304
>M.Javanica_Scaff18759g079423 on CAA38278  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]
          Length = 70

 Score = 43.1 bits (100), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 22/29 (75%)

Query: 310 IPFWIIRNSWGPKWGKGGFFYIRRGKDEC 338
           +P+WII+NSW  +WG+ G+  I +G ++C
Sbjct: 3   VPYWIIKNSWTAQWGEDGYIRIAKGSNQC 31
>M.Javanica_Scaff18759g079423 on EAN83733  Cruzipain  (Cysteine protease)  [Trypanosoma cruzi]
          Length = 70

 Score = 41.6 bits (96), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 4/46 (8%)

Query: 296 VIVGYGTATCNKEKIPFWIIRNSWGPKWGKGGFFYIRRGKDECNIE 341
           ++VGY     +   +P WII+NSW  +WG+ G+  I +G ++C ++
Sbjct: 1   LLVGYN----DSATVPHWIIKNSWTTQWGEDGYIRIAKGSNQCLVK 42
>M.Javanica_Scaff18759g079423 on AAV98582  CP4  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 42.4 bits (98), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 21/153 (13%)

Query: 84  LLRIAQNVADINKITYNIEFDARTKWPGCKSIIDYVQHQGYCGSCWAHSAASAYTDRHCI 143
           LL    N A+   +  N   +A   W   K  ++ ++ QG CGSCWA SA  A   ++ I
Sbjct: 69  LLGFRMNKAERKAVKSNAIANADCDWRK-KGAVNPIKDQGQCGSCWAFSAIQAQESQYYI 127

Query: 144 ELLKKVSSIPNNASYTFSAYDLLSC-SKENGCDGGRAVEAYRWIEKNG---ICTGTDFP- 198
              K + S+        S  +L+ C +   GC+GG    AY ++ K+      T  D+P 
Sbjct: 128 S-FKTLQSL--------SEQNLVDCVTTCYGCNGGLMDAAYDYVVKHQSGKFMTEADYPY 178

Query: 199 -RKDGCKPYPFAPTVKEPK-----LEGCKKNLA 225
             +DG   +  A    + K      EG +K+LA
Sbjct: 179 TARDGSCKFNAAKGTSQIKSYVNVAEGDEKDLA 211
>M.Javanica_Scaff18759g079423 on CAA54438  CP1  (Cysteine protease)  [Trichomonas vaginalis]
          Length = 255

 Score = 42.0 bits (97), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 21/153 (13%)

Query: 84  LLRIAQNVADINKITYNIEFDARTKWPGCKSIIDYVQHQGYCGSCWAHSAASAYTDRHCI 143
           LL    N A+   +  N   +A   W   K  ++ ++ QG CGSCWA SA  A   ++ I
Sbjct: 56  LLGFRMNKAERKAVKSNAIANADCDWRK-KGAVNPIKDQGQCGSCWAFSAIQAQESQYYI 114

Query: 144 ELLKKVSSIPNNASYTFSAYDLLSC-SKENGCDGGRAVEAYRWIEKNG---ICTGTDFP- 198
              K + S+        S  +L+ C +   GC+GG    AY ++ K+      T  D+P 
Sbjct: 115 S-FKTLQSL--------SEQNLVDCVTTCYGCNGGLMDAAYDYVVKHQSGKFMTEADYPY 165

Query: 199 -RKDGCKPYPFAPTVKEPK-----LEGCKKNLA 225
             +DG   +  A    + K      EG +K+LA
Sbjct: 166 TARDGSCKFNAAKGTSQIKSYVNVAEGDEKDLA 198
>M.Javanica_Scaff18759g079423 on XP_650642  CP2  (Cysteine protease)  [Entamoeba histolytica]
          Length = 315

 Score = 40.4 bits (93), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 53/279 (18%)

Query: 78  SISQEE---LLRIAQNVADINKITY-NIEFDARTKWPGCKSIIDYVQHQGYCGSCWAHSA 133
           +++ EE   LL+  +   +  ++ Y NI+      W   +  +  ++ Q  CGSC+   +
Sbjct: 65  AMTNEEYRTLLKSKRTTEENGQVKYLNIQAPESVDWRK-EGKVTPIRDQAQCGSCYTFGS 123

Query: 134 ASAYTDRHCIELLKKVSSIPNNASYTFSAYDLLSCSKENGCDGGRAVE---AYRWIEKNG 190
            +A   R  IE     +++        S   ++ C+++NG +G         Y +I ++G
Sbjct: 124 LAALEGRLLIEKGGDANTLD------LSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEHG 177

Query: 191 ICTGTDFPRKDGCKPYPFAPTVKEPKLEGCKKNLALTQDGDQLILLIENTMALKDVGAVG 250
           +   +D+P       Y  + +        CK N+           +  N           
Sbjct: 178 VAKESDYP-------YTGSDST-------CKTNVKSFAKITGYTKVPRNN---------- 213

Query: 251 GEANIEKQLKNGPV-------SAAFVVYEDFNAYTDGVYRHVTGKVKGGHAVVIVGYGTA 303
            EA ++  L  G V       SA F +Y+   AYTD   ++    +   H V  VGYG  
Sbjct: 214 -EAELKAALSQGLVDVSIDASSAKFQLYKS-GAYTDTKCKNNYFALN--HEVCAVGYGVV 269

Query: 304 TCNKEKIPFWIIRNSWGPKWGKGGFFYIRRGKDECNIET 342
               +    WI+RNSWG  WG  G+  +    + C + T
Sbjct: 270 ----DGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVAT 304
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19470g080849
         (156 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17352g076516
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff165g002849
         (253 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24523g089484
         (189 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18756g079415
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18619g079142
         (88 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2177g021185
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22242g085818
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23055g087188
         (77 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22107g085590
         (403 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22646g086499
         (607 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff238g003845
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17204g076213
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21451g084473
         (302 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2374g022497
         (122 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2213g021430
         (242 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff175g002988
         (55 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20130g082099
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17406g076625
         (196 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2081g020497
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21963g085346
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23271g087521
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18906g079716
         (316 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1993g019862
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1929g019402
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17561g076951
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16438g074585
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1999g019909
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2217g021455
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21197g084044
         (149 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17502g076820
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24263g089085
         (216 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24760g089857
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18488g078890
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16764g075290
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20067g081983
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17076g075936
         (248 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17820g077485
         (308 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19215g080350
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23043g087173
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21497g084544
         (189 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21039g083772
         (155 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22403g086089
         (119 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22661g086524
         (169 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21186g084026
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17203g076210
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18158g078179
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1939g019476
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22550g086356
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22515g086287
         (162 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18714g079317
         (161 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19g000487
         (253 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17777g077400
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2277g021847
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19114g080157
         (263 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24578g089567
         (287 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17242g076293
         (68 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19862g081622
         (261 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2152g021018
         (138 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20026g081916
         (633 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2267g021771
         (160 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21832g085132
         (194 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1627g017151
         (677 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16309g074306
         (334 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20652g083065
         (103 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1641g017257
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2231g021546
         (126 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17987g077842
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1666g017449
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2485g023255
         (130 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16583g074902
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21804g085091
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19795g081494
         (54 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18324g078534
         (197 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2360g022416
         (514 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19921g081724
         (133 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1816g018561
         (106 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1988g019835
         (333 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16528g074783
         (69 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2237g021590
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2457g023068
         (343 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19525g080960
         (92 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2119g020801
         (328 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16643g075024
         (107 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff245g003924
         (441 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001348165  RESA  (Others)  [plasmodium falciparum]                  43   4e-05
>M.Javanica_Scaff245g003924 on XP_001348165  RESA  (Others)  [plasmodium falciparum]
          Length = 1085

 Score = 42.7 bits (99), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 22  PKTVPTYYDILNVKKDAPRDEIVKSFRKLALKYHPDKNKAPEAKNIMQDVNEAYETLEDE 81
           P T+  YYDIL V  +A  +EI + + KLA  Y+P +       +  + VNEAY+ L D 
Sbjct: 520 PDTL--YYDILGVGVNADMNEITERYFKLAENYYPYQRSGSTVFHNFRKVNEAYQVLGDI 577

Query: 82  DKRKEYD 88
           DK++ Y+
Sbjct: 578 DKKRWYN 584
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2243g021633
         (211 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff23250g087489
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21144g083952
         (211 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20446g082698
         (60 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2112g020737
         (441 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17382g076569
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16617g074972
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19491g080893
         (223 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff195g003257
         (295 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2360g022419
         (422 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24179g088937
         (241 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff244g003908
         (120 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21566g084669
         (85 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1815g018560
         (102 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1656g017365
         (169 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21260g084155
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20769g083266
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2163g021098
         (403 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff16555g074835
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19626g081164
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2298g021996
         (240 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff21323g084263
         (70 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18474g078854
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19186g080303
         (186 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22358g086027
         (561 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24218g089017
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1802g018453
         (256 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff191g003212
         (179 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff176g002991
         (207 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2185g021228
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22676g086548
         (164 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1823g018622
         (249 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff24106g088826
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff22043g085467
         (185 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2159g021073
         (236 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19108g080139
         (258 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1730g017904
         (226 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff1926g019390
         (414 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff17216g076235
         (61 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20172g082187
         (254 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff19853g081611
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20333g082474
         (155 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff18827g079556
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2066g020383
         (359 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff20698g083155
         (56 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff6437g043922
         (498 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4404g034434
         (301 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3839g031476
         (87 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff7963g050150
         (52 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3292g028328
         (333 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4622g035519
         (147 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5934g041699
         (50 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5661g040458
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff320g004843
         (58 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5623g040284
         (452 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff7294g047499
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff25662g091241
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff784g009871
         (228 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2772g025120
         (452 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff458g006510
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3667g030475
         (95 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3376g028789
         (155 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff28055g094544
         (82 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff29900g096885
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3812g031318
         (86 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff625g008296
         (343 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3275g028221
         (245 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff7376g047839
         (771 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff7524g048435
         (135 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5451g039520
         (290 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4299g033889
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff6643g044845
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff495g006914
         (148 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff760g009643
         (277 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff829g010344
         (144 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff31167g098365
         (150 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff518g007130
         (189 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5271g038653
         (125 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff7048g046524
         (73 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4428g034560
         (387 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4537g035100
         (140 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4880g036775
         (406 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff6086g042382
         (98 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4503g034933
         (151 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff27846g094291
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5391g039254
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff6560g044486
         (57 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff6966g046187
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff7817g049597
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff779g009815
         (64 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff8075g050598
         (118 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3834g031446
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2670g024477
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3033g026753
         (255 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff6560g044487
         (67 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5054g037595
         (412 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3544g029730
         (587 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5126g037971
         (584 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5103g037841
         (154 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff8024g050384
         (127 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4976g037211
         (131 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff498g006940
         (74 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2682g024548
         (66 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff677g008806
         (110 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff6158g042719
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff549g007492
         (186 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4850g036638
         (81 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3616g030156
         (76 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff403g005854
         (835 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff25558g091087
         (158 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4381g034312
         (90 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2778g025155
         (512 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4643g035635
         (104 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5901g041575
         (155 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4369g034245
         (521 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff7939g050060
         (183 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff29639g096574
         (62 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff6263g043169
         (241 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff6927g046044
         (143 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5845g041308
         (236 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5774g040980
         (78 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5785g041038
         (157 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff808g010127
         (139 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff7791g049481
         (94 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2708g024733
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff30301g097351
         (184 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2662g024412
         (180 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff6734g045216
         (53 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff36g000832
         (108 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff30145g097161
         (80 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff6311g043369
         (124 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5743g040828
         (91 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4055g032634
         (105 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff558g007588
         (415 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3746g030939
         (376 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff6104g042470
         (462 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff606g008093
         (89 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4710g035965
         (306 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff335g005040
         (257 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3307g028408
         (72 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2929g026135
         (168 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff2800g025300
         (269 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff7648g048913
         (144 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3203g027781
         (420 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff6602g044660
         (249 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff587g007888
         (221 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3659g030417
         (182 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4202g033376
         (152 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAQ63567  MAHRP1  (Others)  [Plasmodium falciparum]                    45   5e-07
>M.Javanica_Scaff4202g033376 on AAQ63567  MAHRP1  (Others)  [Plasmodium falciparum]
          Length = 338

 Score = 44.7 bits (104), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 58  IEEENRQLREAAEKCPD------DSALKRALEAINELVCEIGRAVGRGIRAVFDVIGRAI 111
           + +E  QL++A  +  +        A     +A+++    IG  VG    ++ +++G A 
Sbjct: 14  LADEPTQLQDAVPETTEKLAEVVSDAATNVTDAVSDTASGIGSLVGEAASSLGNLVGEAA 73

Query: 112 KGIGNVIARALTAIGNVISSCLKAIGNLLSRFFSWIG 148
            GIGN++  A + IGN++      IG+L+    S +G
Sbjct: 74  SGIGNIVGGAASGIGNIVGGAASGIGSLVGDAASGLG 110

 Score = 39.7 bits (91), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 30/56 (53%)

Query: 85  INELVCEIGRAVGRGIRAVFDVIGRAIKGIGNVIARALTAIGNVISSCLKAIGNLL 140
           + E    +G  VG     + +++G A  GIGN++  A + IG+++      +GNL+
Sbjct: 58  VGEAASSLGNLVGEAASGIGNIVGGAASGIGNIVGGAASGIGSLVGDAASGLGNLV 113
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff7834g049647
         (79 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4352g034151
         (309 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff25250g090623
         (336 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3907g031844
         (149 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff26199g092017
         (75 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff826g010305
         (100 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4193g033332
         (181 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff7583g048671
         (187 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff5186g038263
         (63 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff26090g091874
         (137 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4278g033756
         (116 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff3309g028412
         (171 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= M.Javanica_Scaff4767g036209
         (213 letters)

Database: protseq.fasta 
           1775 sequences; 1,065,101 total letters

Searching..................................................done

 ***** No hits found ******



BLAST Search Results

BLASTP 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Results of query sequence 1 through 3579  [Next][Last]