BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1351g014969
(208 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608665 variant erythrocyte surface antigen-1, alpha subun... 26 2.0
XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.7
XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.2
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 24 8.9
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.5
>M.Javanica_Scaff1351g014969 on XP_001608665 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1326
Score = 25.8 bits (55), Expect = 2.0, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 124 CTKCCICYKNDCNKDFKECKKHGEK 148
C K C C ND N D K+ ++H K
Sbjct: 232 CKKECSCVVNDKNDDTKKLERHIHK 256
>M.Javanica_Scaff1351g014969 on XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 828
Score = 24.3 bits (51), Expect = 6.7, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 68 MLAFDCKEFDNGLNNTYYNCL----SYDFVLNVHK 98
MLA E+D + YYN L SY V N+ K
Sbjct: 78 MLALAIGEYDESYDGMYYNILAKYNSYGDVSNLEK 112
>M.Javanica_Scaff1351g014969 on XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 23.9 bits (50), Expect = 8.2, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 2 VSNILIYNKFLNI--ILLLNFSLHFSKA 27
V+N+L+YN+ LN I LN L SKA
Sbjct: 708 VTNVLLYNRPLNDDEISALNAKLSISKA 735
>M.Javanica_Scaff1351g014969 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 23.9 bits (50), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 85 YNCLSYDFVLNVHKRQQSKNIP 106
+N L +DF+ N+ + +Q +IP
Sbjct: 1944 WNTLKHDFISNMLQSEQPNDIP 1965
>M.Javanica_Scaff1351g014969 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 23.9 bits (50), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 78 NGLNNTYYNCLSYDFVLNVHKRQQSKNIP 106
N L + +N L +F+ N+ + +Q K++P
Sbjct: 1826 NKLTDNEWNTLKDEFISNMLQSEQPKDVP 1854
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1485g016075
(66 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.0
AAK19757 MIC8 (Invasion) [Toxoplasma gondii] 22 2.6
>M.Javanica_Scaff1485g016075 on XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2256
Score = 22.7 bits (47), Expect = 2.0, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 13 ILYSGKSDAVPMSSYN 28
ILYSG +D S+YN
Sbjct: 1113 ILYSGSNDNTKSSTYN 1128
>M.Javanica_Scaff1485g016075 on AAK19757 MIC8 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 22.3 bits (46), Expect = 2.6, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 1 MWCFVFWHFVACILYSGKSDAVPMSSYNTGQTWTALRILWRLVNVLPPDSSIRCIC 56
+WCF W V + + D++ +S+ T +L +L PD +C
Sbjct: 6 IWCFFAWRMVVRASFLKEMDSIFVSAIRQNVQHTHSALLAKLKEPPDPDDENSWLC 61
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13609g067795
(61 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_813421 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.7
XP_813429 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.6
XP_817310 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.9
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 22 4.0
XP_810562 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.0
XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.0
>M.Javanica_Scaff13609g067795 on XP_813421 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 746
Score = 22.3 bits (46), Expect = 2.7, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 19 VKMRITSTAPTSQISRISPTTPTCCTSNTSTT 50
V R++ PT + R +T T CT++ T
Sbjct: 492 VDERVSKLCPTESVGR-DASTGTACTTDVKIT 522
>M.Javanica_Scaff13609g067795 on XP_813429 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 818
Score = 21.9 bits (45), Expect = 3.6, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 19 VKMRITSTAPTSQISRISPTTPTCCTSNTSTT 50
V R++ TS ++ +P+T T CT++ TT
Sbjct: 470 VDERVSKLCLTSTAAK-NPSTGTACTTDKITT 500
>M.Javanica_Scaff13609g067795 on XP_817310 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 21.9 bits (45), Expect = 3.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 19 VKMRITSTAPTSQISRISPTTPTCCTSNTST 49
V R++ TS ++ +P+T T C+ TST
Sbjct: 494 VDERVSQLCLTSTAAK-NPSTGTACSGGTST 523
>M.Javanica_Scaff13609g067795 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 21.9 bits (45), Expect = 4.0, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 29 TSQISRISPTTPTCCTSNTSTTITS 53
T +I + PTT T+N TTI +
Sbjct: 409 TKEIKKKHPTTIIIKTANRKTTINN 433
>M.Javanica_Scaff13609g067795 on XP_810562 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 21.9 bits (45), Expect = 4.0, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 42 CCTSNTSTTITSTQKKSTTR 61
CC T+T ++ST TT+
Sbjct: 623 CCDGKTTTELSSTFGTDTTQ 642
>M.Javanica_Scaff13609g067795 on XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 21.6 bits (44), Expect = 5.0, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 19 VKMRITSTAPTSQISRISPTTPTCCTSNTSTT 50
V R++ PT + R +T T CT++ T
Sbjct: 489 VDERVSKLCPTESVGR-DASTGTACTTDVKIT 519
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15021g071339
(54 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Q27002 GRA4 (Establishment) [Toxoplasma gondii] 21 7.4
>M.Javanica_Scaff15021g071339 on Q27002 GRA4 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 20.8 bits (42), Expect = 7.4, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 13 ATCLVLVPLSLPPPPPEFFADHP 35
AT P ++PPP P F P
Sbjct: 145 ATATYYHPAAVPPPGPSVFVFTP 167
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13706g068063
(281 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803151 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.7
XP_812313 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.3
>M.Javanica_Scaff13706g068063 on XP_803151 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 25.4 bits (54), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Query: 91 DGGANEFQQPVIEVRNGATLSNCIIGAKEGFKAADG 126
DGG+ +P +E R G T G KEG A +G
Sbjct: 679 DGGSFSDGEPTVETREGGT-----DGQKEGIHAQNG 709
>M.Javanica_Scaff13706g068063 on XP_812313 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 25.0 bits (53), Expect = 6.3, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 86 PKKMGDGGANEFQQPVIEVRNGATLSNCIIGAKEGFKAADGVHC--EGSCTLKNVWHEKV 143
PK + DGG ++ E ++ C G + +++ D E TL VW K
Sbjct: 291 PKGISDGGCSDPSVVEWEDDKLIMMAACDGGRRRVYESGDKGESWTEALGTLSRVWSNKK 350
Query: 144 GEDA 147
GE+A
Sbjct: 351 GEEA 354
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1333g014836
(66 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.1
>M.Javanica_Scaff1333g014836 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 23.5 bits (49), Expect = 1.1, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 4 QLLFYFISTLLILNINVNAIGENPWDIQNFAEIISGIGQMIQNPAET 50
+LL +++ + + ++ NA G+ P I+ F EI+ + +Q+P +T
Sbjct: 671 ELLEFYLENIFLEDMK-NANGD-PKVIEKFKEILGKENEEVQDPLKT 715
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13864g068470
(52 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14753g070682
(169 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAQ11895 TRAP (Invasion) [Plasmodium falciparum] 30 0.068
AAQ11894 TRAP (Invasion) [Plasmodium falciparum] 30 0.070
AAQ11892 TRAP (Invasion) [Plasmodium falciparum] 30 0.074
AAW78173 TRAP (Invasion) [Plasmodium falciparum] 29 0.11
AAA29775 TRAP (Invasion) [Plasmodium falciparum] 29 0.11
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 29 0.11
AAW78139 TRAP (Invasion) [Plasmodium falciparum] 29 0.11
AAA29772 TRAP (Invasion) [Plasmodium falciparum] 29 0.11
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 29 0.11
AAW78132 TRAP (Invasion) [Plasmodium falciparum] 28 0.31
AAW78133 TRAP (Invasion) [Plasmodium falciparum] 27 0.43
AAA29771 TRAP (Invasion) [Plasmodium falciparum] 27 0.43
AAW78141 TRAP (Invasion) [Plasmodium falciparum] 27 0.48
AAW78148 TRAP (Invasion) [Plasmodium falciparum] 27 0.49
AAW78176 TRAP (Invasion) [Plasmodium falciparum] 27 0.51
AAW78157 TRAP (Invasion) [Plasmodium falciparum] 27 0.52
AAW78161 TRAP (Invasion) [Plasmodium falciparum] 27 0.53
AAW78136 TRAP (Invasion) [Plasmodium falciparum] 27 0.54
AAW78162 TRAP (Invasion) [Plasmodium falciparum] 27 0.54
AAW78152 TRAP (Invasion) [Plasmodium falciparum] 27 0.56
AAW78174 TRAP (Invasion) [Plasmodium falciparum] 27 0.62
AAW78159 TRAP (Invasion) [Plasmodium falciparum] 27 0.68
AAW78144 TRAP (Invasion) [Plasmodium falciparum] 27 0.69
AAA29776 TRAP (Invasion) [Plasmodium falciparum] 27 0.70
AAW78151 TRAP (Invasion) [Plasmodium falciparum] 27 0.70
AAQ11891 TRAP (Invasion) [Plasmodium falciparum] 27 0.71
AAA29778 TRAP (Invasion) [Plasmodium falciparum] 27 0.73
AAA29773 TRAP (Invasion) [Plasmodium falciparum] 27 0.73
AAW78158 TRAP (Invasion) [Plasmodium falciparum] 27 0.96
AAW78150 TRAP (Invasion) [Plasmodium falciparum] 27 0.96
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 26 0.97
AAW78175 TRAP (Invasion) [Plasmodium falciparum] 26 1.0
AAW78168 TRAP (Invasion) [Plasmodium falciparum] 26 1.2
AAW78137 TRAP (Invasion) [Plasmodium falciparum] 26 1.3
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 26 1.3
AAW78149 TRAP (Invasion) [Plasmodium falciparum] 26 1.3
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 26 1.3
AAA29774 TRAP (Invasion) [Plasmodium falciparum] 26 1.3
AAW78130 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAW78146 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAW78166 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAW78154 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAW78165 TRAP (Invasion) [Plasmodium falciparum] 26 1.7
AAA29777 TRAP (Invasion) [Plasmodium falciparum] 26 1.7
AAA29770 TRAP (Invasion) [Plasmodium falciparum] 25 1.7
XP_812793 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.8
XP_808840 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.2
XP_815498 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.2
XP_817993 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.2
XP_809198 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.2
XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.3
XP_808800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.6
XP_808213 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.7
AAW78138 TRAP (Invasion) [Plasmodium falciparum] 24 5.1
AAW78177 TRAP (Invasion) [Plasmodium falciparum] 24 5.2
XP_818344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.9
XP_814555 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.7
XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.8
XP_806774 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.8
XP_812607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.7
>M.Javanica_Scaff14753g070682 on AAQ11895 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 30.0 bits (66), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKREPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAQ11894 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 29.6 bits (65), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKREPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAQ11892 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 29.6 bits (65), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKREPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78173 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 29.3 bits (64), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCLPKREPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAA29775 TRAP (Invasion) [Plasmodium falciparum]
Length = 574
Score = 29.3 bits (64), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCLPKREPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 29.3 bits (64), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCLPKREPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78139 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 29.3 bits (64), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCLPKREPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAA29772 TRAP (Invasion) [Plasmodium falciparum]
Length = 565
Score = 29.3 bits (64), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCLPKREPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 29.3 bits (64), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCLPKREPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78132 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 27.7 bits (60), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKWEPLDVPDEPEDDEPR 305
>M.Javanica_Scaff14753g070682 on AAW78133 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 27.3 bits (59), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LH+ S +Q Q E G P +P D+ P PR
Sbjct: 267 EILHKGCTSEIQEQCEEEGCPPKREPLDVPHEPEDDEPR 305
>M.Javanica_Scaff14753g070682 on AAA29771 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 27.3 bits (59), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKREPLDVPQEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78141 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 27.3 bits (59), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LH+ S +Q Q E P +P D+ D P PR
Sbjct: 267 EILHKGCTSEIQEQCEEERCPPKREPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78148 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 27.3 bits (59), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPRNKRSLEELRQIRVGII 144
E LHE S +Q Q E P +P D+ D P PR + +++ II
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKWEPLDVPDEPEDDQPRPRGDNSAVQEPEENII 321
>M.Javanica_Scaff14753g070682 on AAW78176 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 27.3 bits (59), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKWEPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78157 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 27.3 bits (59), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKWEPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78161 TRAP (Invasion) [Plasmodium falciparum]
Length = 554
Score = 27.3 bits (59), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKWEPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78136 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.9 bits (58), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKWEPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78162 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.9 bits (58), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKWEPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78152 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.9 bits (58), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKWEPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78174 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.9 bits (58), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKREPLDVPHEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78159 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.9 bits (58), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKREPLDVPHEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78144 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.9 bits (58), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKREPLDVPHEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAA29776 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.9 bits (58), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKREPLDVPHEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78151 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 26.9 bits (58), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKREPLDVPHEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAQ11891 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.9 bits (58), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKREPLDVPHEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAA29778 TRAP (Invasion) [Plasmodium falciparum]
Length = 562
Score = 26.6 bits (57), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKREPLDVPHEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAA29773 TRAP (Invasion) [Plasmodium falciparum]
Length = 568
Score = 26.6 bits (57), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKREPLDVPHEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78158 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.6 bits (57), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S L+ Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSELKEQCEEERCPPKWEPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78150 TRAP (Invasion) [Plasmodium falciparum]
Length = 569
Score = 26.6 bits (57), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S L+ Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSELKEQCEEERCPPKWEPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S L+ Q E P +P D+ D P PR
Sbjct: 267 EILHEGCTSELREQCEEERCPPKWEPLDVPDEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78175 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.2 bits (56), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ + P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKWEPLDVPEEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78168 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKREPLDVPHEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78137 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 26.2 bits (56), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKREPLDVPHEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 25.8 bits (55), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKREPLDVPHEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78149 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 25.8 bits (55), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKREPLDVPHEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 25.8 bits (55), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKREPLDVPHEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAA29774 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 25.8 bits (55), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKREPLDVPHEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAW78130 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.8 bits (55), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKREPLDVPHEPEDDEPR 305
>M.Javanica_Scaff14753g070682 on AAW78146 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.8 bits (55), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKREPLDVPHEPEDDEPR 305
>M.Javanica_Scaff14753g070682 on AAW78166 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 25.8 bits (55), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKREPLDVPHEPEDDEPR 305
>M.Javanica_Scaff14753g070682 on AAW78154 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 25.8 bits (55), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S +Q Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSEIQEQCEEERCPPKREPLDVPHEPEDDEPR 305
>M.Javanica_Scaff14753g070682 on AAW78165 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.8 bits (55), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKWEPLDVPQEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAA29777 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 25.8 bits (55), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKWEPLDVPQEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on AAA29770 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 25.4 bits (54), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 90 EKLHEFLISTLQHQSETYGASPLEKPEDLVDLPSLKHPR 128
E LHE S LQ Q E P +P D+ P PR
Sbjct: 267 EILHEGCTSELQEQCEEERCPPKWEPLDVPQEPEDDQPR 305
>M.Javanica_Scaff14753g070682 on XP_812793 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 25.0 bits (53), Expect = 2.8, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 50 SWAATIGTLDDQWIDIHFKDNLGMG 74
SW +GTL W + H +D G+G
Sbjct: 334 SWTEALGTLSRVWGNNHNRDVKGVG 358
>M.Javanica_Scaff14753g070682 on XP_808840 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 821
Score = 24.6 bits (52), Expect = 4.2, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 42 LHSINYPYSWAATIGTLDDQWIDIHFKDNLGMG 74
++ N SW +GTL W + H + G+G
Sbjct: 332 VYEFNLTESWTEALGTLSRVWGNKHKGNKKGVG 364
>M.Javanica_Scaff14753g070682 on XP_815498 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 822
Score = 24.6 bits (52), Expect = 4.2, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 42 LHSINYPYSWAATIGTLDDQWIDIHFKDNLGMG 74
++ N SW +GTL W + H + G+G
Sbjct: 332 VYEFNLTESWTEALGTLSRVWGNKHKGNKKGVG 364
>M.Javanica_Scaff14753g070682 on XP_817993 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 830
Score = 24.6 bits (52), Expect = 4.2, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 42 LHSINYPYSWAATIGTLDDQWIDIHFKDNLGMG 74
++ N SW +GTL W + H + G+G
Sbjct: 332 VYEFNLTESWTEALGTLSRVWGNKHKGNKKGVG 364
>M.Javanica_Scaff14753g070682 on XP_809198 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 832
Score = 24.6 bits (52), Expect = 4.2, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 42 LHSINYPYSWAATIGTLDDQWIDIHFKDNLGMG 74
++ N SW +GTL W + H + G+G
Sbjct: 332 VYEFNLTESWTEALGTLSRVWGNKHKGNKKGVG 364
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15259g071919
(203 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium falcipa... 25 3.2
XP_001347629 MSP3 (Invasion) [Plasmodium falciparum] 24 8.2
>M.Javanica_Scaff15259g071919 on AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium
falciparum]
Length = 484
Score = 25.0 bits (53), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 40/98 (40%), Gaps = 10/98 (10%)
Query: 53 FVLIMNVKPNSRIIDYFYK---KNTGSSYKIEV---NPVNKVFI-AKLSQGHKYISQLKT 105
FVL PNSR D F +N Y I +P K FI +K+ + + K
Sbjct: 50 FVLFY-FTPNSRKSDLFKNSSVENNNDDYIINSLLKSPNGKKFIVSKIDEALSFYDSKKN 108
Query: 106 RILIEIANNEIVKKFFKNLG--KQIRLNNNFIKNSDYF 141
I N FK L K+ +NNFI N DYF
Sbjct: 109 DINKYNEGNNNNNADFKGLSLFKENTPSNNFIHNKDYF 146
>M.Javanica_Scaff15259g071919 on XP_001347629 MSP3 (Invasion) [Plasmodium falciparum]
Length = 354
Score = 23.9 bits (50), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 111 IANNEIVKKFFKNLGKQIRLNNNFIKNSDYFETSI 145
+A+ EIVKK+ NL I NN+ I+N + T+I
Sbjct: 23 VASKEIVKKYNLNLRNAILNNNSQIENEENVNTTI 57
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13587g067722
(160 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAA83031 Hemolysin (Invasion) [Cryptosporidium parvum] 25 2.8
>M.Javanica_Scaff13587g067722 on AAA83031 Hemolysin (Invasion) [Cryptosporidium parvum]
Length = 229
Score = 24.6 bits (52), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 12/86 (13%)
Query: 1 MGKERLDNAAP-VIHATKVRLVDNPKLYDENIEDPIDAQEVFDYIKDISDPEHPYTLEQL 59
G+ ++ AP I NP++ ++ I +D ++++DY + D E T+E
Sbjct: 41 FGENIINMGAPSFIPEYPTAYYSNPEVMNQGINSLVDTKQLYDYSSPVGDLEK--TIEHY 98
Query: 60 NVVQEELIYVGLDPLDPYVDVRFTPT 85
+ E +G + + FTPT
Sbjct: 99 KMSHE----IGWNASN-----SFTPT 115
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1327g014789
(231 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.4
AAX07974 alpha-8 giardin (Others) [Giardia duodenalis] 25 4.6
Q4VPP9 Giardin subunit alpha-8 (Others) [Giardia duodenalis] 25 4.6
>M.Javanica_Scaff1327g014789 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 26.6 bits (57), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 11/60 (18%)
Query: 55 GPNSNKNYKFNKLYELT----KKTVGDG-FCEPC------IKNGQCQKSEGIEWRGIRIF 103
GP +N K N YE+ +KT +C+PC KNG+C +G + GI+
Sbjct: 1299 GPCKKENGKDNDEYEIKFDDKEKTFKHAKYCDPCPKFKVDCKNGKCDNDKGGDCNGIKTI 1358
>M.Javanica_Scaff1327g014789 on AAX07974 alpha-8 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 24.6 bits (52), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 126 LELYYPINPNEFLTFLAGHNEEINKKLIKADDISFAYFKQT 166
+++ P E+ +A + E NK L A ++F F+QT
Sbjct: 176 VDILVTTKPQEWEKIVAAYEEHTNKSLETAICMAFPGFEQT 216
>M.Javanica_Scaff1327g014789 on Q4VPP9 Giardin subunit alpha-8 (Others) [Giardia duodenalis]
Length = 255
Score = 24.6 bits (52), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 126 LELYYPINPNEFLTFLAGHNEEINKKLIKADDISFAYFKQT 166
+++ P E+ +A + E NK L A ++F F+QT
Sbjct: 176 VDILVTTKPQEWEKIVAAYEEHTNKSLETAICMAFPGFEQT 216
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1575g016770
(55 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff153g002681
(98 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.6
>M.Javanica_Scaff153g002681 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 22.7 bits (47), Expect = 6.6, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 36 YFSSESSFENVFRQKGGQVIARIGLAVDDR 65
Y ES F +F+ K G V A +GL +++
Sbjct: 430 YDGYESKFYKIFKGKCGTVDAFLGLLNNEK 459
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14750g070678
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.94
XP_001609566 variant erythrocyte surface antigen-1, beta subuni... 24 1.5
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.4
XP_001609755 variant erythrocyte surface antigen-1, beta subuni... 23 2.5
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.9
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.7
XP_001608665 variant erythrocyte surface antigen-1, alpha subun... 22 6.1
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.1
XP_951521 VSG (Establishment) [Trypanosoma brucei] 22 7.7
XP_809283 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.0
XP_001219207 VSG (Establishment) [Trypanosoma brucei] 22 9.1
XP_827750 VSG (Establishment) [Trypanosoma brucei] 22 9.6
>M.Javanica_Scaff14750g070678 on XP_001351080 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 24.6 bits (52), Expect = 0.94, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 37 NCCGGSCVKGKCCINGGGLCNGDTDKRCCPGSKCT 71
NC S ++ KC G+CNGD K C G T
Sbjct: 1349 NCKPCSLIEIKC---KNGVCNGDPTKGECNGETVT 1380
>M.Javanica_Scaff14750g070678 on XP_001609566 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1062
Score = 23.9 bits (50), Expect = 1.5, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 13/70 (18%)
Query: 13 LSIFVLFKLNDACVGYGANCGRGNNCCGGSCVKGKCCINGGGL------------CNGDT 60
L +V ++ D C G + G G C + V G+CC GG +G
Sbjct: 130 LQKWVGWQEGDTCCLKGTD-GIGKECKCPAGVGGQCCTGAGGTTCHDCTKCGTGASSGSA 188
Query: 61 DKRCCPGSKC 70
DK+C + C
Sbjct: 189 DKKCYQSAYC 198
>M.Javanica_Scaff14750g070678 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 23.5 bits (49), Expect = 2.4, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 43 CVKGKCCINGGGLCNGDTDKRCCPGSKCTPPGDIG 77
C + K NG G C G + C + PGDIG
Sbjct: 1404 CSEFKVKCNGDG-CRGGANGNTCNKTTFKVPGDIG 1437
Score = 22.3 bits (46), Expect = 5.2, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 44 VKGKCCINGGGLCNGD 59
++G+C + GG C+GD
Sbjct: 1271 IRGECVKSDGGRCSGD 1286
>M.Javanica_Scaff14750g070678 on XP_001609755 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 920
Score = 23.1 bits (48), Expect = 2.5, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 26 VGYGANCGRGNNCCGGSCVKGKCCINGGGLCNGDTDKRCCPGSKCTP 72
VG+ G+ C G GK C GG +CC GS TP
Sbjct: 131 VGWKEEKGKDVCCLKGESGIGKKCTCSGGA------GQCCTGSSNTP 171
>M.Javanica_Scaff14750g070678 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 23.1 bits (48), Expect = 2.9, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 47 KCCINGGGLCNGDTDKRC 64
K C GG CNG+ C
Sbjct: 784 KSCKESGGTCNGECKTEC 801
>M.Javanica_Scaff14750g070678 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 22.7 bits (47), Expect = 3.7, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 43 CVKGKCCINGGGLCNG 58
C GKC + GG CNG
Sbjct: 1339 CKNGKCDNDKGGDCNG 1354
>M.Javanica_Scaff14750g070678 on XP_001608665 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1326
Score = 22.3 bits (46), Expect = 6.1, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 8/42 (19%)
Query: 29 GANCGRGNNCCGGSCVKGKCCINGGGLCNGDTDKRCCPGSKC 70
G GR C G + KC +GG C G PG +C
Sbjct: 179 GTPLGRKCTRCSGGSAECKCSTSGGA-CTG-------PGKEC 212
>M.Javanica_Scaff14750g070678 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 21.9 bits (45), Expect = 7.1, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 52 GGGLCNGDTDKRCCPGSKCTPPGDI 76
G G C G++D C +C DI
Sbjct: 579 GSGDCGGNSDPSLCEPWQCYEEKDI 603
>M.Javanica_Scaff14750g070678 on XP_951521 VSG (Establishment) [Trypanosoma brucei]
Length = 444
Score = 21.9 bits (45), Expect = 7.7, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 29 GANCGRGNNCCGGSCVKGKCCINGGGLCNGDTDKRCCPG 67
G G+ + G S + CI GG D + CC G
Sbjct: 187 GGKGGQPSVWAGKSLIVDLLCICGGSPMPNDRQQACCEG 225
>M.Javanica_Scaff14750g070678 on XP_809283 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 21.9 bits (45), Expect = 8.0, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 49 CINGGGLCNGDTDKRC 64
CI GG C D +++C
Sbjct: 155 CIFEGGKCPADKEEKC 170
>M.Javanica_Scaff14750g070678 on XP_001219207 VSG (Establishment) [Trypanosoma brucei]
Length = 453
Score = 21.6 bits (44), Expect = 9.1, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Query: 22 NDACVGYGANCGRGNNCCGGSCVKGKCCINGGGLCNGDTDKRCCPG 67
N+ C G G+ GG+ V C+ + DT CC G
Sbjct: 177 NEDC---GTVLGQRPKYAGGALVTDLLCLCAQHVNGSDTKHLCCEG 219
>M.Javanica_Scaff14750g070678 on XP_827750 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 21.6 bits (44), Expect = 9.6, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 16/48 (33%), Gaps = 4/48 (8%)
Query: 32 CGRGNNCCGGSCVKGKC----CINGGGLCNGDTDKRCCPGSKCTPPGD 75
CG G G K CI G + K CC G + P D
Sbjct: 196 CGTGTTTPGEQAGKALLVDLLCICAGANTDTTAGKSCCKGCETNPNHD 243
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14246g069406
(198 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi] 35 0.002
XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi] 34 0.003
XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 34 0.005
XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi] 33 0.008
XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi] 33 0.011
XP_818353 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.024
XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.046
XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.079
XP_807279 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.23
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 29 0.24
XP_818963 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.28
XP_813587 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.38
XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.38
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.55
XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.56
XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.62
XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.0
XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.0
XP_806454 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.4
XP_805438 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.8
XP_820663 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.1
XP_808081 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.5
AAQ63567 MAHRP1 (Others) [Plasmodium falciparum] 25 2.9
XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.0
XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.5
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.2
XP_817816 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.0
>M.Javanica_Scaff14246g069406 on XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 35.0 bits (79), Expect = 0.002, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 58/153 (37%), Gaps = 27/153 (17%)
Query: 19 ISKQKNYTAIRNAKFLYYIFNSTDQIIKRKKRVGFPPFVPPIPPARPVFPPAPPVPPLLV 78
+S K + + N N T+ +V PP PA+ + +PPV PL
Sbjct: 691 LSSGKIHATVANVFLYNRPLNETEIGALNASKVTIPPPERKPVPAKALTTTSPPVEPLTT 750
Query: 79 P---------PAPPVG--------------LAAGLSASASAQANAAASAA--LNAALSA- 112
P+P + +G + S + NAA S LNAA S
Sbjct: 751 SVTTEMQPTVPSPATAGPQPTEQATLNGSSVPSGGAPSTPEELNAATSTPEELNAATSTP 810
Query: 113 -QANAAASAAANAAASAQANAAASAAANAAASL 144
+ NAA S+A A A+A +S A AS+
Sbjct: 811 EELNAATSSAREGTADQLASATSSDGHEAVASV 843
>M.Javanica_Scaff14246g069406 on XP_804330 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 34.3 bits (77), Expect = 0.003, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 55 PFVPPIPPARPVFPPAPPVPPLLVP----PAPPVGLAAGLSASASAQANAAASAALNAAL 110
P VP PA P + VP P+ P L A + S A+ NAA S+A
Sbjct: 725 PTVPSPTPAGPQPTEQATLNGSSVPSGGAPSTPEELNA--ATSTPAELNAATSSAREGTA 782
Query: 111 SAQANAAASAAANAAASAQANAAASAAANAAAS 143
A+A +S A AS ++ AAS A++S
Sbjct: 783 DQPASATSSDGHEAVASVTSSGAASTDVGASSS 815
>M.Javanica_Scaff14246g069406 on XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 33.9 bits (76), Expect = 0.005, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 58 PPIPPARP-VFPPAPPVPPLLVPPAPPVGLAA-------GLSASASAQANAAASAALNAA 109
P PA P V PP +PP PVG G +A+A+ +A A
Sbjct: 730 PSAEPASPFVARNQNAAPPATIPPEAPVGQTTLQQPQHEGKGQNATAEESATTQEV--PA 787
Query: 110 LSAQANAAASAAANAAASAQA 130
++Q + +AA+N+ A+ +A
Sbjct: 788 TTSQGSVEKAAASNSHAAGEA 808
>M.Javanica_Scaff14246g069406 on XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 33.1 bits (74), Expect = 0.008, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 58 PPIPPARP-VFPPAPPVPPLLVPPAPPVGLAA-------GLSASASAQANAAASAALNAA 109
P PA P V PP +PP PVG G +A+A+ +A A
Sbjct: 738 PSAEPASPFVARNQNAAPPAKIPPEAPVGQTTLQQPQHEGKGQNATAEESATTQEV--PA 795
Query: 110 LSAQANAAASAAANAAASAQA 130
++Q + +AA+N+ A+ +A
Sbjct: 796 TTSQGSVEKAAASNSHAAGEA 816
>M.Javanica_Scaff14246g069406 on XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 804
Score = 32.7 bits (73), Expect = 0.011, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 58 PPIPPARP-VFPPAPPVPPLLVPPAPPVGLAA-------GLSASASAQANAAASAALNAA 109
P PA P V PP +PP PVG G +A+A+ +A A
Sbjct: 698 PSAEPASPFVARNQNAAPPATIPPEAPVGQTTLQQPQHEGKGQNATAEESATTQEV--PA 755
Query: 110 LSAQANAAASAAANAAASAQA 130
++Q + +AA+N+ A+ +A
Sbjct: 756 NTSQGSVEKAAASNSHAAGEA 776
>M.Javanica_Scaff14246g069406 on XP_818353 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 903
Score = 32.0 bits (71), Expect = 0.024, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 58 PPIPPARPVFPPAPPVPPLLVPPAPPVGLAAGLSASASAQANAAASAALNAALSAQANAA 117
P + + PPAPPV P P AG + Q+ ++ A + A ++ +
Sbjct: 743 PSTVSSASIMPPAPPVTPNAQKAGNPS--TAGTQLTEQGQSMGSSGAGSDGASASAVSTV 800
Query: 118 ASAAANAAASAQANAAAS 135
++ +A + Q + S
Sbjct: 801 STPSAEEESVVQVTSGTS 818
>M.Javanica_Scaff14246g069406 on XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 30.8 bits (68), Expect = 0.046, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 58 PPIPPARPVFPPAPPVPPLLVPPAPPVGLAAGLSASASAQANAAASAALNAALSAQANAA 117
P + + PPAPPV P P AG + Q+ ++ A + A ++ +
Sbjct: 743 PSTVSSASIIPPAPPVTPNGQKAGNP-STPAGTKLTEQGQSMGSSGAGSDGASASAVSTV 801
Query: 118 ASAAANAAASAQANAAAS 135
++ +A + Q + S
Sbjct: 802 STPSAEEESVVQVTSGTS 819
>M.Javanica_Scaff14246g069406 on XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 30.0 bits (66), Expect = 0.079, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 38/89 (42%)
Query: 54 PPFVPPIPPARPVFPPAPPVPPLLVPPAPPVGLAAGLSASASAQANAAASAALNAALSAQ 113
P VP P + P+P ++PP PV A ++ ++S A + S+
Sbjct: 704 PNKVPISPLVKEPSSPSPVASDSIIPPITPVKKNAQIAGTSSTPAVTHRTQQRQPMGSSG 763
Query: 114 ANAAASAAANAAASAQANAAASAAANAAA 142
A++ ++ + +A + +A + A+
Sbjct: 764 ADSGGASTSAVSAVSTPSAEKDSVKEVAS 792
>M.Javanica_Scaff14246g069406 on XP_807279 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 28.9 bits (63), Expect = 0.23, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 78 VPPAPPVGLAAGLSASASAQANAAASAAL---NAALSAQANAAASAAANAAASAQANA 132
VP APP +AAG S A A +A +L NA LS + + + S Q ++
Sbjct: 813 VPAAPPSTVAAGSSVREPAMAAESAGNSLPENNAQLSKGETSQQATLNEDSESMQRDS 870
>M.Javanica_Scaff14246g069406 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 28.9 bits (63), Expect = 0.24, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 91 SASASAQANAAASAALNAALSAQANAAASAAANAAA 126
+ ASAQ+ A+A + +A A A + ASA + A+A
Sbjct: 60 TKGASAQSGASAQSGASAQSGASAQSGASAQSGASA 95
Score = 25.8 bits (55), Expect = 2.2, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 85 GLAAGLSASASAQANAAASAALNAALSAQANAAA 118
G +A ASA + A+A + A+ + SAQ+ A+A
Sbjct: 62 GASAQSGASAQSGASAQSGASAQSGASAQSGASA 95
>M.Javanica_Scaff14246g069406 on XP_818963 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1055
Score = 28.5 bits (62), Expect = 0.28, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 77 LVPPAPPVGLAAGLSASASAQANAAASAAL---NAALSAQANAAASAAANAAASAQANA 132
LVP PP +A G S S SA A +A +L NA + + A S Q ++
Sbjct: 776 LVPAVPPSTVAGGSSVSESAIAAQSAENSLPENNAQFHQGETSQQTTPHEAKESMQRDS 834
>M.Javanica_Scaff14246g069406 on XP_813587 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 751
Score = 28.1 bits (61), Expect = 0.38, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 38/115 (33%), Gaps = 24/115 (20%)
Query: 54 PPFVPPIPPARPVFPPA------------PPVPP------------LLVPPAPPVGLAAG 89
PP P+P A P P VPP L + P G A
Sbjct: 527 PPKRKPVPAAAATSPSVESANDRVNTNTQPTVPPPATAGPQQTDQATLNTSSVPSGGAPS 586
Query: 90 LSASASAQANAAASAALNAALSAQANAAASAAANAAASAQANAAASAAANAAASL 144
A ++ A + A+ NAA S+A A A+A +S A S+
Sbjct: 587 TPAEPKSEEPKPAESESEEPKPAEPNAATSSAREGTADQPASATSSDGHEAVTSV 641
>M.Javanica_Scaff14246g069406 on XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 28.1 bits (61), Expect = 0.38, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 78 VPPAPPVGLAAGLSASASAQANAAASAAL---NAALSAQANAAASAAANAAASAQ 129
VP APP +AAG S A A A +L NA LS A + S Q
Sbjct: 774 VPAAPPSTVAAGSSVPKPATAAEIAGNSLPEDNAQLSEGRTAQQATPNEGNESMQ 828
>M.Javanica_Scaff14246g069406 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 27.7 bits (60), Expect = 0.55, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 59 PIPPARPVFPPAPPVPPLLVP 79
P PP++P PP P P ++P
Sbjct: 1721 PKPPSQPTNPPNPFEHPAVIP 1741
>M.Javanica_Scaff14246g069406 on XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 27.7 bits (60), Expect = 0.56, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 70 APPVPPLLVPPAPPVGLAAGLSASASAQANAA-ASAALNAALSAQANAAASAAANAAASA 128
+PPV P V + +AG S Q + A+ A +A+ A + AAAS+
Sbjct: 708 SPPVVPDNVQGTLSLSSSAGQPPSEQGQLKGSIAAGAGDASTPATSTAAASSGQEPVKQL 767
Query: 129 QANAAASAAANA 140
+ + S NA
Sbjct: 768 TSGTSPSGNKNA 779
>M.Javanica_Scaff14246g069406 on XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 27.3 bits (59), Expect = 0.62, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 65 PVFPPAPPVPPLLVPPAPPVGLAAGLSASASAQANAAASAALNAALSAQANAAASAAANA 124
P+ PP +V P+P L AG A + A SA+ +A ++ ++ + + N
Sbjct: 729 PITPPKETSAQEIVLPSPGRTLHAGQEALNGGEGAAGVSASPSAVFASTTSSGSGQSVNQ 788
Query: 125 AASAQ 129
A +
Sbjct: 789 LAPGK 793
>M.Javanica_Scaff14246g069406 on XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 853
Score = 26.6 bits (57), Expect = 1.0, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 30/88 (34%), Gaps = 8/88 (9%)
Query: 58 PPIPPARP-VFPPAPPVPPLLVPPAPPVGLAAGLSASASAQANAAASAALNAALSAQANA 116
P PA P V PP +PP PV + Q NA A A
Sbjct: 747 PSAEPASPFVARNQNAAPPATIPPEAPV-------EQTTLQQPQHEGKGQNATAEESATA 799
Query: 117 AASAAANAAASAQANAAASAAANAAASL 144
A + S + A +S+ A A++
Sbjct: 800 QELPANTSQGSVEKAAVSSSHAVGEATV 827
>M.Javanica_Scaff14246g069406 on XP_804902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 26.6 bits (57), Expect = 1.0, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 77 LVPPAPPVGLAAGLSASASAQANAAASAAL---NAALSAQANAAASAAANAAASAQANA 132
LVP APP +A G S S A A +A + NA LS + + S Q ++
Sbjct: 761 LVPAAPPSTVAGGSSVSEPAIAAESAGNSHQEDNAQLSEDKTSQQTTPHEDYKSMQRDS 819
>M.Javanica_Scaff14246g069406 on XP_806454 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 694
Score = 26.2 bits (56), Expect = 1.4, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 79 PPAPPVGLAAGLSASASAQANAAASAALNAALSAQAN 115
PP P GL LS SAS A +NA+++ N
Sbjct: 433 PPFPTAGLVGFLSHSASQNVWEDAYRCVNASINHGTN 469
>M.Javanica_Scaff14246g069406 on XP_805438 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 360
Score = 25.8 bits (55), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 74 PPLLVPPAPPVGLAA-------GLSASASAQANAAASAALNAALSAQANAAASAAANAAA 126
PP +PP PVG G +A+A+ +A A ++Q + +AA+N+ A
Sbjct: 271 PPATIPPEAPVGQTTLQQPQHEGKGQNATAEESATTQEV--PATTSQGSVGKAAASNSHA 328
Query: 127 SAQANAAA 134
+ +A A
Sbjct: 329 AGEARDDA 336
>M.Javanica_Scaff14246g069406 on XP_820663 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 25.8 bits (55), Expect = 2.1, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%)
Query: 78 VPPAPPVGLAAGLSASASAQANAAASAALNAALSAQANAAASAAANAAASAQANAAASAA 137
+PP P LS S+SA A +LN A + + +A + ++ + +A
Sbjct: 730 IPPVVPDNAQGTLSQSSSAGPLLAEKESLNENQGAGGGSTSPSAPSTVTTSGEESVKQSA 789
Query: 138 ANAA 141
A+
Sbjct: 790 LRAS 793
>M.Javanica_Scaff14246g069406 on XP_808081 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 893
Score = 25.4 bits (54), Expect = 2.5, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 68 PPAPPVPPLLVPPAPPVGLAAGLS------ASASAQANAAASAALNAALSAQANAAASAA 121
P PPL A P +++G SA+AQ +S A + +S A
Sbjct: 721 PNKDSTPPLEKEAAKPSAVSSGSVVSSFPPVSAAAQKTETSSTAGTQPTEKGQSMGSSGA 780
Query: 122 ANAAASAQANAAASAA 137
N +ASA A + S +
Sbjct: 781 GNGSASAPAVSTVSTS 796
>M.Javanica_Scaff14246g069406 on AAQ63567 MAHRP1 (Others) [Plasmodium falciparum]
Length = 338
Score = 25.0 bits (53), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 1 MYYFKYLLF---LYLFLNLYGISKQKNYTAIRNAK 32
+Y +L F + LF+N Y + K+K Y + K
Sbjct: 217 LYAVIFLFFVINILLFINFYNLGKRKGYYLAKKQK 251
>M.Javanica_Scaff14246g069406 on XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 822
Score = 25.4 bits (54), Expect = 3.0, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 31/56 (55%)
Query: 88 AGLSASASAQANAAASAALNAALSAQANAAASAAANAAASAQANAAASAAANAAAS 143
+G ++++S ++ A++ + + + AN+ +S + A++ ++ + AN+ S
Sbjct: 697 SGANSTSSTPVDSGANSTSSTPVDSGANSTSSTPVGSGANSTSSTPVDSGANSTFS 752
Score = 24.6 bits (52), Expect = 4.4, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 32/56 (57%)
Query: 88 AGLSASASAQANAAASAALNAALSAQANAAASAAANAAASAQANAAASAAANAAAS 143
+G ++++ ++ A++ + + + AN+ +S ++ A++ ++ + AN+ +S
Sbjct: 685 SGANSTSLTPVDSGANSTSSTPVDSGANSTSSTPVDSGANSTSSTPVGSGANSTSS 740
>M.Javanica_Scaff14246g069406 on XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 691
Score = 24.6 bits (52), Expect = 4.5, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 79 PPAPPVGLAAGLSASASAQANAAASAALNAALSAQAN 115
PP P GL LS S S A +NA+++ N
Sbjct: 433 PPFPTAGLVGFLSHSTSQNVWEDAYRCVNASINRGTN 469
>M.Javanica_Scaff14246g069406 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 24.3 bits (51), Expect = 6.2, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 9/16 (56%)
Query: 62 PARPVFPPAPPVPPLL 77
PA P PP PVP L
Sbjct: 2431 PAAPAGPPVTPVPELP 2446
Score = 24.3 bits (51), Expect = 6.2, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 165 ECSSICSSERSSICCSECSSIFIGGRGYKS 194
+CS I +E S +C S I R YK+
Sbjct: 1514 DCSEIGPNENGSFAIFKCPSCAISCRSYKT 1543
>M.Javanica_Scaff14246g069406 on XP_817816 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 24.3 bits (51), Expect = 7.0, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 8/44 (18%)
Query: 77 LVPPAPPVGLAAGLSASASAQANAAASAALNAALSAQANAAASA 120
++PP+PPV + +AQ +S L+ Q + S+
Sbjct: 759 IIPPSPPV--------TPNAQKTETSSTPAETQLTEQGQSMGSS 794
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1339g014882
(89 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.8
XP_001609751 variant erythrocyte surface antigen-1, alpha subun... 24 1.9
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.8
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.8
XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.9
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.9
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.9
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.9
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.1
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.2
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.2
XP_811955 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.7
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 22 7.1
>M.Javanica_Scaff1339g014882 on XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2256
Score = 23.9 bits (50), Expect = 1.8, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 14 NAVLHGGEGTSKPSSN-----ADEILDSFLQENPKYTNMDFSDGHL 54
N + + G +SK + N DE + + LQ PK D+S G +
Sbjct: 1931 NDIQNDGIPSSKITDNEWNTLKDEFISNMLQNQPKDVPNDYSSGDI 1976
>M.Javanica_Scaff1339g014882 on XP_001609751 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1298
Score = 23.9 bits (50), Expect = 1.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 26 PSSNADEILDSFLQENPKYTNMDFSDGH 53
P + E+LD ++ENP Y GH
Sbjct: 859 PGFSCKEVLDQDMEENPTYPPAASHLGH 886
>M.Javanica_Scaff1339g014882 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 23.5 bits (49), Expect = 2.8, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 28 SNADEILDSFLQENPKYTNMD 48
SN +++ D+++ NP ++MD
Sbjct: 2072 SNPNQVDDTYVDSNPDNSSMD 2092
>M.Javanica_Scaff1339g014882 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 23.5 bits (49), Expect = 2.8, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 28 SNADEILDSFLQENPKYTNMD 48
SN +++ D+++ NP ++MD
Sbjct: 2090 SNPNQVDDTYVDSNPDNSSMD 2110
>M.Javanica_Scaff1339g014882 on XP_001350796 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 28 SNADEILDSFLQENPKYTNMD 48
SN +++ D+++ NP ++MD
Sbjct: 2558 SNPNQVDDTYVDSNPDNSSMD 2578
>M.Javanica_Scaff1339g014882 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 28 SNADEILDSFLQENPKYTNMD 48
SN +++ D+++ NP ++MD
Sbjct: 2894 SNPNQVDDTYVDSNPDNSSMD 2914
>M.Javanica_Scaff1339g014882 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 28 SNADEILDSFLQENPKYTNMD 48
SN +++ D+++ NP ++MD
Sbjct: 2180 SNPNQVDDTYVDSNPDNSSMD 2200
>M.Javanica_Scaff1339g014882 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 23.5 bits (49), Expect = 2.9, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 28 SNADEILDSFLQENPKYTNMD 48
SN +++ D+++ NP ++MD
Sbjct: 2509 SNPNQVDDTYVDSNPDNSSMD 2529
>M.Javanica_Scaff1339g014882 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 23.1 bits (48), Expect = 3.1, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 28 SNADEILDSFLQENPKYTNMD 48
SN +++ D+++ NP ++MD
Sbjct: 2060 SNPNQVDDTYVDSNPDNSSMD 2080
>M.Javanica_Scaff1339g014882 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 23.1 bits (48), Expect = 3.2, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 28 SNADEILDSFLQENPKYTNMD 48
SN +++ D+++ NP ++MD
Sbjct: 2179 SNPNQVDDTYVDSNPDNSSMD 2199
>M.Javanica_Scaff1339g014882 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 23.1 bits (48), Expect = 3.2, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 28 SNADEILDSFLQENPKYTNMD 48
SN +++ D+++ NP ++MD
Sbjct: 3865 SNPNQVDDTYVDSNPDNSSMD 3885
>M.Javanica_Scaff1339g014882 on XP_811955 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 92
Score = 22.3 bits (46), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 35 DSFLQENPKYTNMDFSDGHLQA 56
D L +PKY D +DG+L++
Sbjct: 68 DEDLPADPKYQLEDTADGNLES 89
>M.Javanica_Scaff1339g014882 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 22.3 bits (46), Expect = 7.1, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 20 GEGTSKPSSNADEILDSFLQENPKYTNMDFSDGHLQ 55
G TS+ S N+ + ++S Q+N T D H+Q
Sbjct: 1149 GNDTSEMSHNSSQHIESDQQKNDMKTVGDLGTTHVQ 1184
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14211g069316
(212 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808402 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.5
XP_804173 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.8
>M.Javanica_Scaff14211g069316 on XP_808402 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 24.3 bits (51), Expect = 7.5, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 58 VFTLATPTDSCKWGDCVEGFANKDAF-VEHVNGHVEMSQDKKCHWRD 103
++ L G C +G N D + + V GHV + K HW D
Sbjct: 185 IYMLVGKCSGTTVGSC-QGEVNADQWGIFLVKGHVTSEEGDKIHWND 230
>M.Javanica_Scaff14211g069316 on XP_804173 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 746
Score = 23.9 bits (50), Expect = 8.8, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 60 TLATPTDSCKWGDCVEGFANKDAFVEH 86
T + PT+S KWG + N+ A H
Sbjct: 229 TSSNPTESIKWGQ-IRSLLNESAIAAH 254
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13415g067282
(58 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 23 0.96
XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.7
XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.7
AAK97081 gGSP (Others) [Giardia duodenalis] 22 2.9
>M.Javanica_Scaff13415g067282 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 23.5 bits (49), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 5 YNNFITINTLYFSSQICQFTICYFDIISRLESNSPKNGNDKVK 47
Y N + N YF+ I QF +I+ L ND++K
Sbjct: 1003 YENILKNNDTYFNDDIKQFVKSNSKVITGLTETQKNALNDEIK 1045
>M.Javanica_Scaff13415g067282 on XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 22.7 bits (47), Expect = 1.7, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 14 LYFSSQICQFTICYFDIISRLESNSPKNGNDKVKGESIS 52
+Y+SS + + + +D +SR+ NS K V+G +S
Sbjct: 323 VYWSSAMGSWWMEEYDTLSRVWGNSLKRTGHGVQGGFVS 361
>M.Javanica_Scaff13415g067282 on XP_807804 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 22.7 bits (47), Expect = 1.7, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 14 LYFSSQICQFTICYFDIISRLESNSPKNGNDKVKGESIS 52
+Y+SS + + + +D +SR+ NS K V+G +S
Sbjct: 324 VYWSSAMGSWWMEEYDTLSRVWGNSLKRTGHGVQGGFVS 362
>M.Javanica_Scaff13415g067282 on AAK97081 gGSP (Others) [Giardia duodenalis]
Length = 255
Score = 21.9 bits (45), Expect = 2.9, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 5 YNNFITINTLYFSSQICQFTICYFD 29
+ +TI + FS+ IC F+ +D
Sbjct: 60 FTKLMTILSFTFSADICDFSSVIYD 84
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15076g071484
(180 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827709 VSG (Establishment) [Trypanosoma brucei] 24 5.6
>M.Javanica_Scaff15076g071484 on XP_827709 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 24.3 bits (51), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 74 LQFLKQ--LAKTHSLAKRRRLLKKASTDQLLSLTEICFNIVRDKFKLTKRQKSRL 126
+FLKQ T S R+ L+ A D + ++TEI N + +KL ++Q +
Sbjct: 248 WKFLKQKCAGATTSYVSVRKTLRGAKQDFMDAVTEISANRRTNLYKLGEKQNKEI 302
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15313g072040
(81 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAM47174 Rh4 (Adhesin) [Plasmodium falciparum] 23 3.9
AAM47175 Rh4 (Adhesin) [Plasmodium falciparum] 23 3.9
AAM47192 Rh4 (Adhesin) [Plasmodium falciparum] 23 3.9
>M.Javanica_Scaff15313g072040 on AAM47174 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 22.7 bits (47), Expect = 3.9, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 48 KGLKTKNGELFAQKLKYDANVFFLLNLKAST 78
K L T N +L +++KY +F +L +T
Sbjct: 1175 KNLDTSNIQLIKEQIKYFLQIFHILQENITT 1205
>M.Javanica_Scaff15313g072040 on AAM47175 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 22.7 bits (47), Expect = 3.9, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 48 KGLKTKNGELFAQKLKYDANVFFLLNLKAST 78
K L T N +L +++KY +F +L +T
Sbjct: 1177 KNLDTSNIQLIKEQIKYFLQIFHILQENITT 1207
>M.Javanica_Scaff15313g072040 on AAM47192 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1716
Score = 22.7 bits (47), Expect = 3.9, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 48 KGLKTKNGELFAQKLKYDANVFFLLNLKAST 78
K L T N +L +++KY +F +L +T
Sbjct: 1176 KNLDTSNIQLIKEQIKYFLQIFHILQENITT 1206
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1408g015444
(104 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608667 variant erythrocyte surface antigen-1, beta subuni... 23 3.3
XP_820662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.6
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 23 7.1
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.1
>M.Javanica_Scaff1408g015444 on XP_001608667 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1139
Score = 23.5 bits (49), Expect = 3.3, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 30 DNGENGQNYYKRLAGEDEER--FKLEFTGNNLDKPIVEKTDIND 71
++ G+ Y RL G++EE + + GN DK + T ND
Sbjct: 813 NSASGGEGVYARLKGKEEESKLYMMSIGGN--DKVVEALTKWND 854
>M.Javanica_Scaff1408g015444 on XP_820662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 23.5 bits (49), Expect = 3.6, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 31 NGENGQNYY--KRLAGEDEERFKLEFTGNN 58
NG G Y KR+ G+ E+ KLE TG+N
Sbjct: 665 NGTQGSAYVDGKRVGGD--EQCKLETTGSN 692
>M.Javanica_Scaff1408g015444 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 22.7 bits (47), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 49 RFKLEFTGNNLDKPIVEKTDINDTFYFENLNG 80
++ + G + K EK D+ YFE L+G
Sbjct: 17 KYLFDLIGETVQKKAKEKADVASRKYFEELHG 48
>M.Javanica_Scaff1408g015444 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 22.3 bits (46), Expect = 8.1, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 29 RDNGENGQNYYKRLAGEDEERFKL 52
+ NG+ GQ K G+DE +KL
Sbjct: 224 KANGKKGQKPAKDHYGDDENYYKL 247
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14515g070081
(144 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16099g073843
(211 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 30 0.095
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 30 0.12
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 29 0.16
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 29 0.18
AAK31241 variable surface protein 42c (Establishment) [Giardi... 27 0.43
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 27 1.2
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 27 1.3
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 27 1.3
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 25 3.2
AAK31240 variable surface protein 42b (Establishment) [Giardi... 25 3.3
AAK31238 variable surface protein 21f (Establishment) [Giardi... 24 3.4
XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum] 24 8.8
AAW78173 TRAP (Invasion) [Plasmodium falciparum] 24 9.0
AAW78139 TRAP (Invasion) [Plasmodium falciparum] 24 10.0
AAW78172 TRAP (Invasion) [Plasmodium falciparum] 24 10.0
>M.Javanica_Scaff16099g073843 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 30.0 bits (66), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 21 PDHPKDCPELPKTPKKPKNPKLPSNPKKPNPPIN 54
P++P + PE P P+ P NP+ PSNP+ P+ P N
Sbjct: 349 PENPSN-PENPSNPENPSNPENPSNPENPSNPEN 381
Score = 26.9 bits (58), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 26 DCPELPKTPKKPKNPKLPSNPKKPNPPINNRN 57
D E P+ P P+NP P NP P P N N
Sbjct: 344 DLDENPENPSNPENPSNPENPSNPENPSNPEN 375
Score = 25.4 bits (54), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 28 PELPKTPKKPKNPKLPSNPKKPNPPINNRN 57
P P+ P P+NP P NP P P N N
Sbjct: 352 PSNPENPSNPENPSNPENPSNPENPSNPEN 381
>M.Javanica_Scaff16099g073843 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 29.6 bits (65), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 28 PELPKTPKKPKNPKLPSNPKKPNPPIN 54
PE P P+ P NP+ PSNP+ P+ P N
Sbjct: 349 PENPSNPENPSNPENPSNPENPSNPEN 375
Score = 26.9 bits (58), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 26 DCPELPKTPKKPKNPKLPSNPKKPNPPINNRN 57
D E P+ P P+NP P NP P P N N
Sbjct: 344 DLDENPENPSNPENPSNPENPSNPENPSNPEN 375
Score = 25.4 bits (54), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 28 PELPKTPKKPKNPKLPSNPKKPNPPINNRN 57
P P+ P P+NP P NP P P N N
Sbjct: 352 PSNPENPSNPENPSNPENPSNPENPSNPEN 381
>M.Javanica_Scaff16099g073843 on AAW78160 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 29.3 bits (64), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 28 PELPKTPKKPKNPKLPSNPKKPNPP 52
PE P P+ P NP+ PSNP+ P+ P
Sbjct: 349 PENPSNPENPSNPENPSNPENPSNP 373
Score = 27.3 bits (59), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 26 DCPELPKTPKKPKNPKLPSNPKKPNPPIN 54
D E P+ P P+NP P NP P P N
Sbjct: 344 DLDENPENPSNPENPSNPENPSNPENPSN 372
Score = 25.0 bits (53), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 22 DHPKDCPELPKTPKKPKNPKLPSNPKKPNPP 52
D + P P+ P P+NP P NP P+ P
Sbjct: 346 DENPENPSNPENPSNPENPSNPENPSNPDIP 376
>M.Javanica_Scaff16099g073843 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 29.3 bits (64), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 28 PELPKTPKKPKNPKLPSNPKKPNPP 52
PE P P+ P NP+ PSNP+ P+ P
Sbjct: 349 PENPSNPENPSNPENPSNPENPSNP 373
Score = 27.3 bits (59), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 26 DCPELPKTPKKPKNPKLPSNPKKPNPPIN 54
D E P+ P P+NP P NP P P N
Sbjct: 344 DLDENPENPSNPENPSNPENPSNPENPSN 372
Score = 25.0 bits (53), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 28 PELPKTPKKPKNPKLPSNPKKPNPP 52
P P+ P P+NP P NP P+ P
Sbjct: 352 PSNPENPSNPENPSNPENPSNPDIP 376
>M.Javanica_Scaff16099g073843 on AAK31241 variable surface protein 42c (Establishment) [Giardia
duodenalis]
Length = 128
Score = 26.9 bits (58), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 11/75 (14%)
Query: 130 ESCFKDKRYVL-NDPICMSKCVKI---TYKCVGCSAAKTLTVPINNKCPECAANHVDLSI 185
++C + Y N P C C K T C C A L+ N+KC +C+ N D +I
Sbjct: 7 QTCANGQTYASGNCPTCAEGCAKCQSSTSTCTECLAGYYLS---NSKCVKCSENSADGNI 63
Query: 186 ----DAFKWLEPQGG 196
+ EP GG
Sbjct: 64 KGVPNCVSCKEPSGG 78
>M.Javanica_Scaff16099g073843 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 26.6 bits (57), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 26 DCPELPKTPKKPKNPKLPSNPKKPNPP 52
D E P+ P P+NP P NP P+ P
Sbjct: 344 DLDENPENPSNPENPSNPENPSNPDIP 370
>M.Javanica_Scaff16099g073843 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 26.6 bits (57), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 26 DCPELPKTPKKPKNPKLPSNPKKPNPP 52
D E P+ P P+NP P NP P+ P
Sbjct: 344 DLDENPENPSNPENPSNPENPSNPDIP 370
>M.Javanica_Scaff16099g073843 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 26.6 bits (57), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 26 DCPELPKTPKKPKNPKLPSNPKKPNPP 52
D E P+ P P+NP P NP P+ P
Sbjct: 344 DLDENPENPSNPENPSNPENPSNPDIP 370
>M.Javanica_Scaff16099g073843 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 25.4 bits (54), Expect = 3.2, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 42 LPSNPKKPNPPINNRNNKVVK------AKYTEKDTCLSESK 76
L +NP+KP P N +++VVK K E D +S+ K
Sbjct: 479 LKANPQKPIDPKANLDSEVVKLQIKINEKSNELDNAISQVK 519
>M.Javanica_Scaff16099g073843 on AAK31240 variable surface protein 42b (Establishment) [Giardia
duodenalis]
Length = 127
Score = 24.6 bits (52), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Query: 128 WVESCFKDKRYVL-NDPICMSKCVKI---TYKCVGCSAAKTLTVPINNKCPECAANHVDL 183
++C + Y N P C C K T C C A L+ N+KC +C+ N D
Sbjct: 5 QCQTCANGQTYASGNCPTCAEGCAKCQSSTSTCTECLAGYCLS---NSKCVKCSENSADG 61
Query: 184 SI 185
+I
Sbjct: 62 NI 63
>M.Javanica_Scaff16099g073843 on AAK31238 variable surface protein 21f (Establishment) [Giardia
duodenalis]
Length = 128
Score = 24.3 bits (51), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 130 ESCFKDKRYVL-NDPICMSKCVKI---TYKCVGCSAAKTLTVPINNKCPECAANHVDLSI 185
++C + Y N P C C K T C C A L+ N+KC +C+ N D +I
Sbjct: 7 QTCANGQTYASGNCPTCAEGCAKCQSSTSTCTECLAGYYLS---NSKCVKCSENSADGNI 63
>M.Javanica_Scaff16099g073843 on XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2241
Score = 23.9 bits (50), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 19/60 (31%)
Query: 23 HPKDCPELPKTPKK------------PKNPKLPSNPKKPNPPINNRNNKVVKAKYTEKDT 70
HP+ C ++P T + PK P P+ PKKP P ++ TEKDT
Sbjct: 1709 HPQICGDIPTTKETVDEDACKRAEEPPKEP-APTGPKKPAPTAGGEEDQ------TEKDT 1761
>M.Javanica_Scaff16099g073843 on AAW78173 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 23.9 bits (50), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 29 ELPKTPKKPKNPKLPSNPKKP 49
+L + P+ P NP+ PSNP P
Sbjct: 344 DLDENPENPSNPENPSNPDIP 364
>M.Javanica_Scaff16099g073843 on AAW78139 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 23.9 bits (50), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 29 ELPKTPKKPKNPKLPSNPKKP 49
+L + P+ P NP+ PSNP P
Sbjct: 344 DLDENPENPSNPENPSNPDIP 364
>M.Javanica_Scaff16099g073843 on AAW78172 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 23.9 bits (50), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 29 ELPKTPKKPKNPKLPSNPKKP 49
+L + P+ P NP+ PSNP P
Sbjct: 344 DLDENPENPSNPENPSNPDIP 364
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1428g015612
(53 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.0
XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.4
XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.2
>M.Javanica_Scaff1428g015612 on XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 22.3 bits (46), Expect = 2.0, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 27 TKNILESSKGSSNVQLVNKKFFK 49
T+N ++ KG++++ N K FK
Sbjct: 70 TRNTIDPFKGTTSISFANWKEFK 92
>M.Javanica_Scaff1428g015612 on XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1147
Score = 21.9 bits (45), Expect = 2.4, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 27 TKNILESSKGSSNVQLVNKKFFK 49
T+N ++ KG++++ N K FK
Sbjct: 171 TRNAIDPFKGTTSISFANWKEFK 193
>M.Javanica_Scaff1428g015612 on XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 867
Score = 21.6 bits (44), Expect = 3.2, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 2 SSLNIIFLFAFLLIPKTADTCSVSITKNILESSKGSSNVQLVNKKFF 48
S++ ++FL + A S T+N ++ KG +++ N K F
Sbjct: 46 STVLLLFLVWMICCDCGAAAAGGSKTRNTIDPFKGKTSISFANWKEF 92
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14072g068980
(51 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805438 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 1.5
XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 1.6
XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 1.6
XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 1.6
XP_816233 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 1.6
XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 1.9
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 22 3.6
>M.Javanica_Scaff14072g068980 on XP_805438 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 360
Score = 22.3 bits (46), Expect = 1.5, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 23 EKNHYGKGPNRSTTECATIQ 42
+ H GKG N + E AT Q
Sbjct: 288 QPQHEGKGQNATAEESATTQ 307
>M.Javanica_Scaff14072g068980 on XP_810023 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 804
Score = 22.3 bits (46), Expect = 1.6, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 23 EKNHYGKGPNRSTTECATIQ 42
+ H GKG N + E AT Q
Sbjct: 732 QPQHEGKGQNATAEESATTQ 751
>M.Javanica_Scaff14072g068980 on XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 22.3 bits (46), Expect = 1.6, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 23 EKNHYGKGPNRSTTECATIQ 42
+ H GKG N + E AT Q
Sbjct: 764 QPQHEGKGQNATAEESATTQ 783
>M.Javanica_Scaff14072g068980 on XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 22.3 bits (46), Expect = 1.6, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 23 EKNHYGKGPNRSTTECATIQ 42
+ H GKG N + E AT Q
Sbjct: 772 QPQHEGKGQNATAEESATTQ 791
>M.Javanica_Scaff14072g068980 on XP_816233 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 851
Score = 22.3 bits (46), Expect = 1.6, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 23 EKNHYGKGPNRSTTECATIQ 42
+ H GKG N + E AT Q
Sbjct: 779 QPQHEGKGQNATAEESATTQ 798
>M.Javanica_Scaff14072g068980 on XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 853
Score = 22.3 bits (46), Expect = 1.9, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 23 EKNHYGKGPNRSTTECATIQ 42
+ H GKG N + E AT Q
Sbjct: 781 QPQHEGKGQNATAEESATAQ 800
>M.Javanica_Scaff14072g068980 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 21.6 bits (44), Expect = 3.6, Method: Composition-based stats.
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 20 YEMEKNHYGKGP 31
Y KNHY K P
Sbjct: 2085 YSCRKNHYNKNP 2096
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13185g066714
(225 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815845 Trans-sialidase (Invasion) [Trypanosoma cruzi] 33 0.015
XP_821378 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.20
XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.22
XP_815197 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.34
XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.60
XP_802262 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.2
XP_815193 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.2
XP_816371 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.5
XP_810953 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.0
XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.2
XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.8
XP_805897 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.2
XP_821146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.5
XP_808562 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.6
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 24 8.7
XP_807166 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.5
>M.Javanica_Scaff13185g066714 on XP_815845 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 936
Score = 32.7 bits (73), Expect = 0.015, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 88 CNG--PCKVNDCWNEDIGDDSISLFGTDSSANFYINGGGARNGNGKAIQFDGAGTLHVNN 145
C G P + ++ W +D + + + + Y++G R G G+A + + ++
Sbjct: 630 CGGENPKEHSNTWEKDTTHQVVLMLQNGTQGSVYVDG--QRVGGGEACALENKDSKEISQ 687
Query: 146 FYIGNNYLGIRSCGNCLQQYSRTMYVNRLTVEN 178
FYIG G RS G +Q ++ V+ + + N
Sbjct: 688 FYIGG---GERSAGGAGRQEDVSVTVSNVLLYN 717
>M.Javanica_Scaff13185g066714 on XP_821378 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 934
Score = 29.3 bits (64), Expect = 0.20, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 91 PCKVNDCWNEDIGDDSISLFGTDSSANFYINGGGARNGNGKAIQFDGAGTLHVNNFYIGN 150
P +++ W +D + L + + Y++ G R GNG+ + A +++FYIG
Sbjct: 633 PKELSSTWEKDTTHQVVILLRNGTQGSAYVD--GQRVGNGQ-FELKTAEANRISHFYIGG 689
Query: 151 NYLGIRSCGNCLQQYSRTMYVNRLTVEN 178
+ RS G +Q ++ V + + N
Sbjct: 690 DE---RSAGGAGRQEELSVTVRNVLLYN 714
>M.Javanica_Scaff13185g066714 on XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 29.3 bits (64), Expect = 0.22, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 88 CNG--PCKVNDCWNEDIGDDSISLFGTDSSANFYINGGGARNGNGKAIQFDGAGTLHVNN 145
C G P + ++ W +D + + + + Y++G R G G+A + + +++
Sbjct: 630 CGGKNPEEHSNTWEKDTTHQVVLMLQNGTQGSAYVDG--QRVGGGEACALENKDSKEISH 687
Query: 146 FYIGNN 151
FYIG +
Sbjct: 688 FYIGGD 693
>M.Javanica_Scaff13185g066714 on XP_815197 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 679
Score = 28.5 bits (62), Expect = 0.34, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 64 LPVFNLASGA---TIERCIYSGVDGIHCNGPCKVNDCWNEDIGDD-SISLFGTDSSANFY 119
L V N ++ + ER SG G+ G V + D DD S+ ++ TDS AN+
Sbjct: 253 LSVLNTSAASYEGKFERVFPSGGSGVLMEGGTLVFPVFAFDDNDDYSMIIYSTDSGANWM 312
Query: 120 INGGG--ARNGNGKAIQFDGA 138
++ G A+ N + +++G+
Sbjct: 313 LSNGTSPAKCSNPRITEWEGS 333
>M.Javanica_Scaff13185g066714 on XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 27.7 bits (60), Expect = 0.60, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 104 DDSISLFGTDSSANFYINGGGARNGNGKAIQFDGAGTLHVNNFYIGNNYLGIRSCGNCLQ 163
D + L S Y++G R G Q D A + +++FYIG + R+ G+
Sbjct: 655 DHVVLLIRNGSHGTAYVDG--QRVGEDAQCQLDNADSKGISHFYIGGDGDKTRNQGDVSV 712
Query: 164 QYSRTMYVNR-LTVENLAA 181
+ + NR L+ E + A
Sbjct: 713 TVTNVLLYNRPLSSEEIGA 731
>M.Javanica_Scaff13185g066714 on XP_802262 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 443
Score = 26.6 bits (57), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 53 KNGKWGSGEFQLPVFNLASG--ATIERCIYSGVDGIHCNGPCKVNDCWNEDIGDD-SISL 109
K +WG+ + L V A+ + ER SG G+ N V D DD S+ +
Sbjct: 74 KRIEWGAPKLLLSVNISATSYESKFERFFPSGGSGVLMNNGTLVFPVVAFDDNDDYSMII 133
Query: 110 FGTDSSANFYINGGG--ARNGNGKAIQFDGA 138
+ TD AN+ ++ G A+ N + +++G+
Sbjct: 134 YSTDDGANWMLSNGTSPAKCSNSRVTEWEGS 164
>M.Javanica_Scaff13185g066714 on XP_815193 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 702
Score = 25.8 bits (55), Expect = 2.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 76 ERCIYSGVDGIHCNGPCKVNDCWNEDIGDD-SISLFGTDSSANFYINGG 123
ER SG G+ G V + D DD S+ ++ TDS AN+ ++ G
Sbjct: 215 ERVFPSGGSGVLMEGGTLVFPVFAFDDNDDYSMIIYSTDSGANWMLSNG 263
>M.Javanica_Scaff13185g066714 on XP_816371 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 757
Score = 25.8 bits (55), Expect = 2.5, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 64 LPVFNLASGA---TIERCIYSGVDGIHCNGPCKVND--CWNEDIGDDSISLFGTDSSANF 118
L V N +S + ER SG G+ G V +++D D S+ ++ TDS AN+
Sbjct: 254 LSVLNTSSASYEGKFERFFPSGGSGVLMEGGTLVFPVIAFDDDNDDYSMIVYSTDSGANW 313
Query: 119 YINGG 123
++ G
Sbjct: 314 MLSNG 318
>M.Javanica_Scaff13185g066714 on XP_810953 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 25.4 bits (54), Expect = 3.0, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 111 GTDSSANFYINGGGARNGNGKAIQFDGAGTLHVNNFYIGNN 151
GT SA Y++G R G G+A + + +++FYIG +
Sbjct: 669 GTQGSA--YVDG--QRVGGGEACALENTDSKEISHFYIGGD 705
>M.Javanica_Scaff13185g066714 on XP_816303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 25.4 bits (54), Expect = 3.2, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 111 GTDSSANFYINGGGARNGNGKAIQFDGAGTLHVNNFYIGNN 151
G SSA Y++G R G+ K +FD A + +++FYIG +
Sbjct: 665 GNQSSA--YVDG--KRLGD-KQCEFDNADSKEISHFYIGGD 700
>M.Javanica_Scaff13185g066714 on XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 795
Score = 25.4 bits (54), Expect = 3.8, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 103 GDDSISLFGTD--SSANFYINGGGARNGNGKA 132
GD +L GTD ++FYI G G GN ++
Sbjct: 666 GDAPCTLGGTDLREISHFYIGGDGGSTGNKES 697
>M.Javanica_Scaff13185g066714 on XP_805897 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 25.0 bits (53), Expect = 4.2, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 101 DIGDDSISLFGTDSSANFYINGGG--ARNGNGKAIQFDGA 138
D D S+ ++ TDS AN+ ++ G A+ N + +++G+
Sbjct: 294 DNDDYSMIIYSTDSGANWMLSNGTSPAKCSNSRVTEWEGS 333
>M.Javanica_Scaff13185g066714 on XP_821146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 25.0 bits (53), Expect = 4.5, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 102 IGDDSISLFGTDSS---ANFYINGGGARNGNGKAI 133
+G+ + L G + S ++FYI G G+ GN + +
Sbjct: 662 VGNAQLDLMGIEKSKGISHFYIGGDGSSTGNQEGL 696
>M.Javanica_Scaff13185g066714 on XP_808562 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 25.0 bits (53), Expect = 4.6, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 101 DIGDDSISLFGTDSSANFYINGGG--ARNGNGKAIQFDGA 138
D D S+ ++ TDS AN+ ++ G A+ N + +++G+
Sbjct: 294 DNDDYSMIIYSTDSGANWMLSNGTSPAKCSNSRVTEWEGS 333
>M.Javanica_Scaff13185g066714 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 24.3 bits (51), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 154 GIRSCGNCLQQYSRTMYVNRLTVENLAAGQFIVGVNNNTNFKDKAYLTNIHILGSTADQV 213
G + +C++++ + ++ L ++ NN ++ K L +H + +
Sbjct: 2317 GYQCIKDCVEKWIQNKREEWKKIKELYLQEY--KNNNQPDYLVKIILEELHPQTQLNEAI 2374
Query: 214 YPCKVFD 220
PCK FD
Sbjct: 2375 KPCKTFD 2381
>M.Javanica_Scaff13185g066714 on XP_807166 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 801
Score = 23.9 bits (50), Expect = 9.5, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 56 KWGSGEFQLPVFNLASGATIERCIYSGVDG 85
K G LPV +G T+ IY+ DG
Sbjct: 265 KMKDGTLVLPVEGTKNGKTVSLIIYTATDG 294
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14850g070927
(212 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 27 1.3
XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.0
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.8
XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.9
XP_001611147 variant erythrocyte surface antigen-1, alpha subun... 24 7.9
>M.Javanica_Scaff14850g070927 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 26.6 bits (57), Expect = 1.3, Method: Composition-based stats.
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 49 NKTGEFLPKVKDMKKME 65
+K EF+PKVKDM K E
Sbjct: 692 DKLKEFIPKVKDMLKKE 708
>M.Javanica_Scaff14850g070927 on XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2287
Score = 24.6 bits (52), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 164 IGRCPKYKSYVVCQYKPPGNVYTA 187
+ R PKYK+ + +P GN TA
Sbjct: 1892 VPRAPKYKTLIEVVLEPSGNNTTA 1915
>M.Javanica_Scaff14850g070927 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 24.3 bits (51), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 164 IGRCPKYKSYVVCQYKPPGNVYTA 187
+ R PKYK+ + +P GN TA
Sbjct: 1750 VPRAPKYKTLIEVVLEPSGNNTTA 1773
>M.Javanica_Scaff14850g070927 on XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 24.3 bits (51), Expect = 6.9, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 74 AQAWADKCTYSHSNPY-----GNYGENFYAYARMDNDSAAIEYVVKGWWSELEYRGALG- 127
+ +A YS N + G+Y F + +R+ + + I V+K W + + L
Sbjct: 429 GEEFASTLMYSDGNLHLLQQRGDYESTFMSLSRLTEELSTINSVLKNWAQKDAFFSKLSI 488
Query: 128 PYPGQDCVAFDAPQNNRGIGHW 149
P G V D N I +
Sbjct: 489 PTAGLVAVLSDTASNGTWIDEY 510
>M.Javanica_Scaff14850g070927 on XP_001611147 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1304
Score = 24.3 bits (51), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 9/47 (19%)
Query: 151 QLAWWNTNLVG------CGIGRCPKYKSYVVCQY---KPPGNVYTAC 188
QLA + LVG C IG C K CQY K P N AC
Sbjct: 106 QLAQVLSALVGWSRIDKCSIGSCDHGKKGSTCQYLQDKTPENKCGAC 152
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1513g016274
(58 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818190 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.41
XP_821303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.41
XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 0.81
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 23 0.89
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.5
>M.Javanica_Scaff1513g016274 on XP_818190 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 807
Score = 24.3 bits (51), Expect = 0.41, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 3 TIIKINNIYFLLFILINFFINKISLSNGDISPY 35
T+++ N+IY L + IN ++ + D +P+
Sbjct: 183 TVVEGNDIYMLAGVYINEYVPSCKVDASDAAPW 215
>M.Javanica_Scaff1513g016274 on XP_821303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 808
Score = 24.3 bits (51), Expect = 0.41, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 3 TIIKINNIYFLLFILINFFINKISLSNGDISPY 35
T+++ N+IY L + IN ++ + D +P+
Sbjct: 183 TVVEGNDIYMLAGVYINEYVPSCKVDASDAAPW 215
>M.Javanica_Scaff1513g016274 on XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 23.5 bits (49), Expect = 0.81, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 3 TIIKINNIYFLLFILINFFINKISLSNGDISP 34
T++K+N+IY +L + NK++ S + P
Sbjct: 164 TVLKVNDIY----MLAGVYTNKVAASGQNAKP 191
>M.Javanica_Scaff1513g016274 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 23.5 bits (49), Expect = 0.89, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 18 INFFINKISLSNGDISPYFNYCIFKCKDLFN 48
IN+ IN + +N DI Y + ++ DL N
Sbjct: 3231 INYNINMSTNTNNDIPKYVSNNVYSGIDLIN 3261
>M.Javanica_Scaff1513g016274 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 22.7 bits (47), Expect = 1.5, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 23 NKISLSNGDISPYFNY 38
+K + +NGD+ YF+Y
Sbjct: 302 DKCTCNNGDVPTYFDY 317
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff12955g066120
(112 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAD40228 P270 (Establishment) [Trichomonas vaginalis] 26 0.57
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.89
XP_818232 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_807140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.9
XP_001609539 variant erythrocyte surface antigen-1, beta subuni... 23 4.4
>M.Javanica_Scaff12955g066120 on AAD40228 P270 (Establishment) [Trichomonas vaginalis]
Length = 255
Score = 25.8 bits (55), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 68 LGNSLSVSGRRRLIQPPPLKRSFGGRG-QRILVGNDWP--ILMSPS 110
L N S S R+++ PP F G + +GN +P I +SPS
Sbjct: 9 LKNMYSRSSSRKVLDGPPSISDFTIEGGTELTIGNTYPITITLSPS 54
>M.Javanica_Scaff12955g066120 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 25.4 bits (54), Expect = 0.89, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 56 NTENNSEDNAGFLGNSLSVSGRRRLIQPPPLKRSFGG 92
NT + + + G S+ V RRR + PL R GG
Sbjct: 893 NTSDTTVKSGDTTGGSICVPPRRRRLYVTPLTRLTGG 929
>M.Javanica_Scaff12955g066120 on XP_818232 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 933
Score = 24.6 bits (52), Expect = 1.8, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 26/64 (40%)
Query: 34 RQFGPSVGGSNSGISQRSLFVDNTENNSEDNAGFLGNSLSVSGRRRLIQPPPLKRSFGGR 93
R+ G G + SG+ V+N ++SE + N L V QP L R G
Sbjct: 182 RKGGQESGAAQSGLLLAKREVNNEGDDSEKKIQWNVNQLPVGTLSEGEQPSSLTRLIGSG 241
Query: 94 GQRI 97
G +
Sbjct: 242 GSGV 245
>M.Javanica_Scaff12955g066120 on XP_807140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 393
Score = 24.3 bits (51), Expect = 1.9, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 27 ESFDFEIRQFGPSVGGSNSGISQRSLFVDNTENN-SEDNAGF 67
ES D + PS + S +S+ ++ ++ EN+ S+DNA F
Sbjct: 107 ESVDDPVPAASPSTVDAGSFVSEPAIAAESAENSLSDDNAQF 148
>M.Javanica_Scaff12955g066120 on XP_001609539 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 884
Score = 23.5 bits (49), Expect = 4.4, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 25 KVESFDFEIRQFGPSVGGSNSGISQ 49
K+ F+ E + PS+GG N+ + Q
Sbjct: 789 KLTEFEKESKLHMPSIGGGNNAVVQ 813
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15174g071713
(87 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845143 VSG (Establishment) [Trypanosoma brucei] 26 0.40
XP_803373 VSG (Establishment) [Trypanosoma brucei] 25 0.43
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.0
XP_805061 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.8
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.1
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.9
ABR92024 MSA-1 (Invasion) [Babesia bovis] 22 5.1
XP_846274 VSG (Establishment) [Trypanosoma brucei] 22 5.1
XP_846884 VSG (Establishment) [Trypanosoma brucei] 22 6.5
PFE0340c ROM4 (Invasion) [Plasmodium falciparum] 22 9.9
>M.Javanica_Scaff15174g071713 on XP_845143 VSG (Establishment) [Trypanosoma brucei]
Length = 501
Score = 25.8 bits (55), Expect = 0.40, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 59 RSFNYNGCNGNCNNFLSQQTCEFACK 84
++ N +G CN S TC+ CK
Sbjct: 411 KTVNMEISDGECNKLTSNNTCKSPCK 436
>M.Javanica_Scaff15174g071713 on XP_803373 VSG (Establishment) [Trypanosoma brucei]
Length = 499
Score = 25.4 bits (54), Expect = 0.43, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 7/47 (14%)
Query: 33 SQVGTLCGNSRRSVTRWAFVARENACRSFNYNGCNGNCNNFLSQQTC 79
SQV ++ GN AF N R NG NCN S TC
Sbjct: 259 SQVESVLGNK-------AFTGHTNNGRYVLGNGAAANCNGGDSSATC 298
>M.Javanica_Scaff15174g071713 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 23.1 bits (48), Expect = 3.0, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 56 NACRSFNYNGCNGNCNNFL 74
N C+ N NG NG+ N L
Sbjct: 1379 NVCKPKNVNGQNGDGNQIL 1397
>M.Javanica_Scaff15174g071713 on XP_805061 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 22.7 bits (47), Expect = 3.8, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Query: 43 RRSVTRW----AFVARENACRSFNYNGCNGNCNNFLSQ 76
++ V W A++ARE CR+ N +C+ L++
Sbjct: 432 KKVVAAWKERDAYIAREYGCRNEWKNYWRSDCHEALTK 469
>M.Javanica_Scaff15174g071713 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 22.7 bits (47), Expect = 4.1, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 55 ENACRSFNYNGCNGNCN 71
E CR NY+G N C+
Sbjct: 1991 EKECRGVNYSGYNKYCS 2007
>M.Javanica_Scaff15174g071713 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 22.7 bits (47), Expect = 4.9, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 60 SFNYNGCNGNCNNFLSQQTCEFACK 84
S + +GNC N + TC+ +CK
Sbjct: 614 SMQWRNEHGNCINKDNDNTCKNSCK 638
>M.Javanica_Scaff15174g071713 on ABR92024 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 22.3 bits (46), Expect = 5.1, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 62 NYNGCNGNCNNFLSQQT 78
N NG G C FL+Q++
Sbjct: 175 NVNGMAGVCKGFLNQES 191
>M.Javanica_Scaff15174g071713 on XP_846274 VSG (Establishment) [Trypanosoma brucei]
Length = 547
Score = 22.3 bits (46), Expect = 5.1, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 40 GNSRRSVTRWAFVARENACRSFNYNGCNGNCNNFLSQQTCEFACKGR 86
G + ++ + A E A + +G +C+ +Q+ CE A +G+
Sbjct: 440 GKKKCTLDKEAKQTAEGAAKQEGKDGKTVDCSKLYTQEKCEKANEGQ 486
>M.Javanica_Scaff15174g071713 on XP_846884 VSG (Establishment) [Trypanosoma brucei]
Length = 493
Score = 22.3 bits (46), Expect = 6.5, Method: Composition-based stats.
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 54 RENACRSFNYNGCNGNC 70
+EN C + N + C G+C
Sbjct: 403 KENECSNKNGDKCKGDC 419
>M.Javanica_Scaff15174g071713 on PFE0340c ROM4 (Invasion) [Plasmodium falciparum]
Length = 759
Score = 21.6 bits (44), Expect = 9.9, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 4/29 (13%)
Query: 42 SRRSVTRWAFVARENACRSFNYNGCNGNC 70
S ++ W F A FNYN NG C
Sbjct: 341 STTAILFWVFFAE----MVFNYNTFNGRC 365
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1540g016494
(88 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610721 variant erythrocyte surface antigen-1, alpha subun... 27 0.21
XP_001609533 variant erythrocyte surface antigen-1, alpha subun... 26 0.39
XP_001608795 variant erythrocyte surface antigen-1, alpha subun... 25 0.50
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 25 0.66
XP_001610497 variant erythrocyte surface antigen-1, alpha subun... 25 0.66
XP_001612314 variant erythrocyte surface antigen-1, alpha subun... 25 0.83
XP_001609565 variant erythrocyte surface antigen-1, alpha subun... 25 1.0
XP_001611206 variant erythrocyte surface antigen-1, alpha subun... 24 1.3
XP_001611900 variant erythrocyte surface antigen-1, alpha subun... 24 1.8
XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.2
ABO31335 PP2C (Establishment) [Toxoplasma gondii] 23 3.4
>M.Javanica_Scaff1540g016494 on XP_001610721 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1331
Score = 26.6 bits (57), Expect = 0.21, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 48 QENAPPHLANATRSHITETLGWQLLFQPPYST 79
Q APP N T I E L W L PYST
Sbjct: 468 QNKAPPKAENKTPRTIREILYW--LSALPYST 497
>M.Javanica_Scaff1540g016494 on XP_001609533 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1162
Score = 25.8 bits (55), Expect = 0.39, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 48 QENAPPHLANATRSHITETLGW--QLLFQPPY 77
Q APP N T I E L W L + P Y
Sbjct: 420 QNKAPPKAGNTTPKTIREILYWLSALPYSPAY 451
>M.Javanica_Scaff1540g016494 on XP_001608795 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1323
Score = 25.4 bits (54), Expect = 0.50, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 48 QENAPPHLANATRSHITETLGWQLLFQPPYS 78
Q+ APP N T I E L W L PYS
Sbjct: 445 QQKAPPKAENRTPKTIREILYW--LSALPYS 473
>M.Javanica_Scaff1540g016494 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 25.0 bits (53), Expect = 0.66, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 48 QENAPPHLANATRSHITETLGWQLLFQPPYS 78
Q APP N T I E L W L PYS
Sbjct: 429 QNKAPPKAENTTPKTIREILYW--LSALPYS 457
>M.Javanica_Scaff1540g016494 on XP_001610497 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1315
Score = 25.0 bits (53), Expect = 0.66, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 48 QENAPPHLANATRSHITETLGWQLLFQPPYS 78
Q+ APP N T I E L W L PYS
Sbjct: 448 QQKAPPKADNKTPRTIREILYW--LSALPYS 476
>M.Javanica_Scaff1540g016494 on XP_001612314 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1308
Score = 24.6 bits (52), Expect = 0.83, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 48 QENAPPHLANATRSHITETLGWQLLFQPPYS 78
Q APP N T I E L W L PYS
Sbjct: 462 QNKAPPKAENKTPKTIREILYW--LSALPYS 490
>M.Javanica_Scaff1540g016494 on XP_001609565 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1341
Score = 24.6 bits (52), Expect = 1.0, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 48 QENAPPHLANATRSHITETLGWQLLFQPPYS 78
Q APP N T I E L W L PYS
Sbjct: 475 QNKAPPKAENKTPRTIREILYW--LSALPYS 503
>M.Javanica_Scaff1540g016494 on XP_001611206 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1285
Score = 24.3 bits (51), Expect = 1.3, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 48 QENAPPHLANATRSHITETLGWQLLFQPPYS 78
Q+ PP N T I E L W L PYS
Sbjct: 427 QKKTPPKAGNTTPKTIREILYW--LSALPYS 455
>M.Javanica_Scaff1540g016494 on XP_001611900 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1226
Score = 23.9 bits (50), Expect = 1.8, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 48 QENAPPHLANATRSHITETLGW--QLLFQPPY 77
Q+ PP N T I E L W L + P Y
Sbjct: 471 QKKGPPKAENKTPKTIREILYWLSALPYSPAY 502
>M.Javanica_Scaff1540g016494 on XP_810068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1147
Score = 23.5 bits (49), Expect = 2.2, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 5 RIFSFLLCIGLTVELYRTILDRVH 28
R+F C G ++YR+ILD V+
Sbjct: 414 RLFMMAHCAGGYYDVYRSILDGVN 437
>M.Javanica_Scaff1540g016494 on ABO31335 PP2C (Establishment) [Toxoplasma gondii]
Length = 255
Score = 23.1 bits (48), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 26 RVHIVFDGFTAR 37
RVH +FDGF R
Sbjct: 124 RVHAMFDGFQGR 135
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14115g069080
(167 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818221 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.32
XP_806340 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.66
XP_804173 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.7
XP_816750 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.1
XP_807449 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.7
XP_806132 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.7
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.7
XP_001352170 MSP1 (Invasion) [Plasmodium falciparum] 25 3.1
XP_817165 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.7
XP_809218 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.7
XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.2
XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.8
XP_820072 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.9
XP_808562 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 6.7
XP_806454 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.8
XP_804487 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 9.4
>M.Javanica_Scaff14115g069080 on XP_818221 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 748
Score = 27.7 bits (60), Expect = 0.32, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 33 DNIIDSAIDAISVASTGAADILLALGNLNQNTADFMKLIIPVGGIVAKEINPKEGSPTY 91
DN DSA+ ++S + + I L + Q A F KL IP G+VA N G T+
Sbjct: 450 DNGEDSAL-SLSRLTDEVSTINSVLKSWAQKDAFFSKLTIPTAGLVAVLSNALSGGDTW 507
>M.Javanica_Scaff14115g069080 on XP_806340 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 633
Score = 26.9 bits (58), Expect = 0.66, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 30 GSDDNIIDSAIDAIS--VASTGAADILLALGNLNQNTADFMKLIIPVGGIVAKEINPKEG 87
G DD+ + +S + STG +LA G ++ N + + + IVA +NP E
Sbjct: 3 GGDDSKSGVGVSFVSPSLVSTGGVMAVLAEGIISYNPSSAKETFVYHSDIVAGYVNPAES 62
Query: 88 SPT 90
P+
Sbjct: 63 WPS 65
>M.Javanica_Scaff14115g069080 on XP_804173 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 746
Score = 25.8 bits (55), Expect = 1.7, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 33 DNIIDSAIDAISVASTGAADILLALGNLNQNTADFMKLIIPVGGIVA 79
DN DSA+ ++S + + I L + Q A F KL IP G+VA
Sbjct: 448 DNGEDSAL-SLSRLTDEVSTINSVLKSWAQKDAFFSKLTIPTAGLVA 493
>M.Javanica_Scaff14115g069080 on XP_816750 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 736
Score = 25.4 bits (54), Expect = 2.1, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 37 DSAIDAISVASTGAADILLALGNLNQNTADFMKLIIPVGGIVAKEINPKEGSPTY 91
+S++ ++S + + I L Q A F L IP G+VA N G T+
Sbjct: 458 ESSVMSLSRLTEELSTIKFFLSTWAQKDAFFSNLTIPTAGLVAVLSNALSGGDTW 512
>M.Javanica_Scaff14115g069080 on XP_807449 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 700
Score = 25.0 bits (53), Expect = 2.7, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 57 LGNLNQNTADFMKLIIPVGGIVAKEINPKEGSPTY 91
L Q A F KL IP G+VA N G T+
Sbjct: 424 LSTWAQKDAFFSKLTIPTAGLVAVLSNALSGGDTW 458
>M.Javanica_Scaff14115g069080 on XP_806132 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 754
Score = 25.0 bits (53), Expect = 2.7, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 57 LGNLNQNTADFMKLIIPVGGIVAKEINPKEGSPTY 91
L Q A F KL IP G+VA N G T+
Sbjct: 478 LSTWAQKDAFFSKLTIPTAGLVAVLSNALSGGDTW 512
>M.Javanica_Scaff14115g069080 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 25.0 bits (53), Expect = 2.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 62 QNTADFMKLIIPVGGIVAKEINPKEGSPTYEQLEKFKTRTEEIW-----SMRSRDI 112
+N D L+ +G V KEI K+ + Y++ K K IW S+++ DI
Sbjct: 13 KNAKDAKHLLDSIGEEVYKEIVEKDDAEKYKEALKGKLSQASIWRETVSSLKTCDI 68
>M.Javanica_Scaff14115g069080 on XP_001352170 MSP1 (Invasion) [Plasmodium falciparum]
Length = 1720
Score = 25.0 bits (53), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 102 EEIWSMRSRDIRIRNYQIYDAIAFAQYYDEVTKP----IMILKKLADEVLN-----PNIL 152
++I +R ++ ++N Q+ D+I Y KP +++LKK D++ ++L
Sbjct: 646 KKIEDLRKIELFLKNAQLKDSIHVPNIYKPQNKPEPYYLIVLKKEVDKLKEFIPKVKDML 705
Query: 153 KSEQYI 158
K EQ +
Sbjct: 706 KKEQAV 711
>M.Javanica_Scaff14115g069080 on XP_817165 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 750
Score = 24.6 bits (52), Expect = 3.7, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 33 DNIIDSAIDAISVASTGAADILLALGNLNQNTADFMKLIIPVGGIVAKEINPKEGSPTYE 92
DN DSA+ ++S + + I L Q A F L IP G+VA + G Y+
Sbjct: 451 DNGEDSAL-SLSRLTKEVSTINSVLKTWAQKDAFFSGLSIPTAGLVAALSDAASGDKWYD 509
Query: 93 Q 93
+
Sbjct: 510 E 510
>M.Javanica_Scaff14115g069080 on XP_809218 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 792
Score = 24.6 bits (52), Expect = 3.7, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 52 DILLALGNLNQNTADFMKLIIPVGGIVA 79
+I L QN A F KL IP G+VA
Sbjct: 472 EIESVLSTWAQNDAFFSKLSIPTAGLVA 499
>M.Javanica_Scaff14115g069080 on XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 24.3 bits (51), Expect = 4.2, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 62 QNTADFMKLIIPVGGIVA 79
QN A F KL IP G+VA
Sbjct: 479 QNDAFFSKLSIPTAGLVA 496
>M.Javanica_Scaff14115g069080 on XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 23.9 bits (50), Expect = 5.8, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 57 LGNLNQNTADFMKLIIPVGGIVA 79
L N Q A F KL IP G+VA
Sbjct: 473 LKNWAQKDAFFSKLSIPTAGLVA 495
>M.Javanica_Scaff14115g069080 on XP_820072 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 23.9 bits (50), Expect = 5.9, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 57 LGNLNQNTADFMKLIIPVGGIVAKEINPKEGSPTY 91
L +Q A F L IP G+VA N G T+
Sbjct: 478 LSTWSQKDAFFSNLTIPTAGLVAVLSNALSGDDTW 512
>M.Javanica_Scaff14115g069080 on XP_808562 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 23.9 bits (50), Expect = 6.7, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 17/99 (17%)
Query: 38 SAIDAISVASTGAADILLALGNLNQNTADFMKLIIPVGGIVAK----------------- 80
S++ ++S + + I L + A F KL IP G+VA
Sbjct: 461 SSVMSLSRLTGELSTIRSVLSTWAKKDAFFSKLAIPTAGLVAVLSDAASNGTWIDEYLCL 520
Query: 81 EINPKEGSPTYEQLEKFKTRTEEIWSMRSRDIRIRNYQI 119
GS + ++ + IWS+ +RD +R+ +
Sbjct: 521 NATVTRGSKAKYGFQLTESNSGAIWSVNTRDDNVRHVSL 559
>M.Javanica_Scaff14115g069080 on XP_806454 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 694
Score = 23.5 bits (49), Expect = 7.8, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 52 DILLALGNLNQNTADFMKLI-IPVGGIV-AKEINPK--EGSPTYEQL 94
DILLA+G + ++T D + I G V KE P+ EG PT + L
Sbjct: 151 DILLAVGEVTKSTVDGNTTVSIKWGSPVPVKEFFPREMEGVPTKQFL 197
>M.Javanica_Scaff14115g069080 on XP_804487 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 752
Score = 23.5 bits (49), Expect = 9.4, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 17/95 (17%)
Query: 39 AIDAISVASTGAADILLALGNLNQNTADFMKLIIPVGGIVA---------------KEIN 83
++ ++S + +I L +QN F IP G+VA + +N
Sbjct: 455 SVISLSCLTEELKEIESVLSTWSQNDVFFSSFSIPTAGLVAVLSDAVGDDTWNDEYRCLN 514
Query: 84 P--KEGSPTYEQLEKFKTRTEEIWSMRSRDIRIRN 116
K E L+ ++ + +WS+ +RD +R+
Sbjct: 515 ATVKNAVKVKEGLQLTESNSGALWSVNTRDDNLRH 549
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15012g071315
(332 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAC37226 SBP1 (Others) [Babesia bovis] 51 3e-08
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 50 8e-08
AAA29571 CSP (Invasion) [Plasmodium falciparum] 32 0.053
AAA63422 CSP (Invasion) [Plasmodium falciparum] 32 0.054
BAD73955 CSP (Invasion) [Plasmodium falciparum] 32 0.054
XP_806228 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.13
AAN87581 CSP (Invasion) [Plasmodium falciparum] 29 0.28
AAN87580 CSP (Invasion) [Plasmodium falciparum] 29 0.34
AAN87583 CSP (Invasion) [Plasmodium falciparum] 28 0.47
BAD73957 CSP (Invasion) [Plasmodium falciparum] 28 0.49
AAN87582 CSP (Invasion) [Plasmodium falciparum] 28 0.50
AAW78216 CSP (Invasion) [Plasmodium falciparum] 28 0.54
AAW78199 CSP (Invasion) [Plasmodium falciparum] 28 0.54
AAW78211 CSP (Invasion) [Plasmodium falciparum] 28 0.54
AAW78202 CSP (Invasion) [Plasmodium falciparum] 28 0.54
AAW78219 CSP (Invasion) [Plasmodium falciparum] 28 0.55
BAD73951 CSP (Invasion) [Plasmodium falciparum] 28 0.57
AAN87592 CSP (Invasion) [Plasmodium falciparum] 28 0.59
AAN87593 CSP (Invasion) [Plasmodium falciparum] 28 0.60
AAW78203 CSP (Invasion) [Plasmodium falciparum] 28 0.63
AAA63153 CSP (Invasion) [Plasmodium falciparum] 28 0.67
AAW78195 CSP (Invasion) [Plasmodium falciparum] 28 0.67
AAW78192 CSP (Invasion) [Plasmodium falciparum] 28 0.73
AAA29521 CSP (Invasion) [Plasmodium falciparum] 28 0.73
AAN87605 CSP (Invasion) [Plasmodium falciparum] 28 0.73
AAW78200 CSP (Invasion) [Plasmodium falciparum] 28 0.74
AAW78194 CSP (Invasion) [Plasmodium falciparum] 28 0.75
AAW78217 CSP (Invasion) [Plasmodium falciparum] 28 0.75
AAW78178 CSP (Invasion) [Plasmodium falciparum] 28 0.76
AAW78220 CSP (Invasion) [Plasmodium falciparum] 28 0.76
AAN87598 CSP (Invasion) [Plasmodium falciparum] 28 0.78
AAN87579 CSP (Invasion) [Plasmodium falciparum] 28 0.79
AAN87614 CSP (Invasion) [Plasmodium falciparum] 28 0.79
AAW78205 CSP (Invasion) [Plasmodium falciparum] 28 0.80
AAN87611 CSP (Invasion) [Plasmodium falciparum] 28 0.81
AAN87587 CSP (Invasion) [Plasmodium falciparum] 28 0.82
AAN87589 CSP (Invasion) [Plasmodium falciparum] 28 0.82
AAW78182 CSP (Invasion) [Plasmodium falciparum] 28 0.92
AAN87594 CSP (Invasion) [Plasmodium falciparum] 28 0.94
AAN87577 CSP (Invasion) [Plasmodium falciparum] 28 0.94
AAN87578 CSP (Invasion) [Plasmodium falciparum] 28 0.95
AAN87602 CSP (Invasion) [Plasmodium falciparum] 28 0.96
AAN87609 CSP (Invasion) [Plasmodium falciparum] 28 0.97
AAW78215 CSP (Invasion) [Plasmodium falciparum] 27 1.2
AAN87595 CSP (Invasion) [Plasmodium falciparum] 27 1.2
AAW78186 CSP (Invasion) [Plasmodium falciparum] 27 1.2
AAA29545 CSP (Invasion) [Plasmodium falciparum] 27 1.4
AAW78209 CSP (Invasion) [Plasmodium falciparum] 27 1.4
AAA29550 CSP (Invasion) [Plasmodium falciparum] 27 1.4
AAW78189 CSP (Invasion) [Plasmodium falciparum] 27 1.4
AAW78185 CSP (Invasion) [Plasmodium falciparum] 27 1.4
AAN87608 CSP (Invasion) [Plasmodium falciparum] 27 1.5
AAW78213 CSP (Invasion) [Plasmodium falciparum] 27 1.5
BAD73953 CSP (Invasion) [Plasmodium falciparum] 27 1.6
AAW78207 CSP (Invasion) [Plasmodium falciparum] 27 1.6
AAA29574 CSP (Invasion) [Plasmodium falciparum] 27 1.6
AAN87606 CSP (Invasion) [Plasmodium falciparum] 27 1.6
AAA29524 CSP (Invasion) [Plasmodium falciparum] 27 1.6
AAW78187 CSP (Invasion) [Plasmodium falciparum] 27 1.6
AAW78180 CSP (Invasion) [Plasmodium falciparum] 27 1.6
AAW78214 CSP (Invasion) [Plasmodium falciparum] 27 1.6
AAW78179 CSP (Invasion) [Plasmodium falciparum] 27 1.6
AAW78201 CSP (Invasion) [Plasmodium falciparum] 27 1.6
AAW78198 CSP (Invasion) [Plasmodium falciparum] 27 1.7
XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.7
AAW78197 CSP (Invasion) [Plasmodium falciparum] 27 1.7
AAW78193 CSP (Invasion) [Plasmodium falciparum] 27 1.7
AAN87599 CSP (Invasion) [Plasmodium falciparum] 27 1.7
AAN87588 CSP (Invasion) [Plasmodium falciparum] 27 1.7
AAN87613 CSP (Invasion) [Plasmodium falciparum] 27 1.8
BAD73954 CSP (Invasion) [Plasmodium falciparum] 27 1.8
AAN87590 CSP (Invasion) [Plasmodium falciparum] 27 1.9
AAN87591 CSP (Invasion) [Plasmodium falciparum] 27 1.9
AAA29562 CSP (Invasion) [Plasmodium falciparum] 27 1.9
AAA29543 CSP (Invasion) [Plasmodium falciparum] 27 1.9
AAL15422 MSA-2a2 (Invasion) [Babesia bovis] 27 1.9
BAD08405 CSP (Invasion) [Plasmodium falciparum] 27 1.9
BAD08407 CSP (Invasion) [Plasmodium falciparum] 27 2.0
BAD08408 CSP (Invasion) [Plasmodium falciparum] 27 2.0
BAD08409 CSP (Invasion) [Plasmodium falciparum] 27 2.0
AAA29555 CSP (Invasion) [Plasmodium falciparum] 27 2.1
AAN87610 CSP (Invasion) [Plasmodium falciparum] 27 2.1
AAA29552 CSP (Invasion) [Plasmodium falciparum] 27 2.3
AAW59565 CSP (Invasion) [Plasmodium falciparum] 27 2.3
AAY44833 MSA-1 (Invasion) [Babesia bovis] 26 2.3
ABA06451 MSA-2a2 (Invasion) [Babesia bovis] 26 2.4
AAL15423 MSA-2b (Invasion) [Babesia bovis] 26 2.4
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 27 2.4
AAW78221 CSP (Invasion) [Plasmodium falciparum] 27 2.4
BAD73952 CSP (Invasion) [Plasmodium falciparum] 27 2.5
AAW78188 CSP (Invasion) [Plasmodium falciparum] 26 2.7
AAW78208 CSP (Invasion) [Plasmodium falciparum] 26 2.7
AAW78190 CSP (Invasion) [Plasmodium falciparum] 26 3.0
AAW78206 CSP (Invasion) [Plasmodium falciparum] 26 3.0
XP_816523 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.7
ABF83992 CSP (Invasion) [Plasmodium falciparum] 25 6.2
ABF83993 CSP (Invasion) [Plasmodium falciparum] 25 6.2
ABF83996 CSP (Invasion) [Plasmodium falciparum] 25 6.4
ABF83987 CSP (Invasion) [Plasmodium falciparum] 25 6.4
AAA29538 CSP (Invasion) [Plasmodium falciparum] 25 7.4
>M.Javanica_Scaff15012g071315 on AAC37226 SBP1 (Others) [Babesia bovis]
Length = 596
Score = 51.2 bits (121), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 33/71 (46%)
Query: 86 PANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPNKYPNQP 145
PA PA PA PA PA PA PA PA PA PA PA PA PA P + P +
Sbjct: 328 PAEKPAETPAETPAEKPAEKPAEKPAEKPAEKPAEKPAEKPAETPAETPAETPAEKPAET 387
Query: 146 PKNNYPSNPSH 156
P P+
Sbjct: 388 PAETPAETPAE 398
Score = 39.3 bits (90), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 26/61 (42%)
Query: 96 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPNKYPNQPPKNNYPSNPS 155
P PA PA PA PA PA PA PA PA PA P + P + P P+
Sbjct: 310 EPVVEEPAEKPAEKPAEKPAEKPAETPAETPAEKPAEKPAEKPAEKPAEKPAEKPAEKPA 369
Query: 156 H 156
Sbjct: 370 E 370
>M.Javanica_Scaff15012g071315 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 50.4 bits (119), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 85 PPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPNKYPNQ 144
PP +P + P +P + P +P + P +P + P NP + P +P + P NP P
Sbjct: 762 PPGSPSESTPGSPSESTPGSPSESTPGSPSESTPGNPSESTPGSPSESTPGNPSESTPGS 821
Query: 145 PPKNNYPSNPSHPKPAPQVC 164
P ++ P +PS P C
Sbjct: 822 PSEST-PGSPSESTPCSGTC 840
Score = 43.1 bits (100), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 86 PANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPNKYPNQP 145
P +P + P +P + P +P + P NP + P +P + P NP + P +P P P
Sbjct: 771 PGSPSESTPGSPSESTPGSPSESTPGNPSESTPGSPSESTPGNPSESTPGSPSESTPGSP 830
Query: 146 PKNNYPSNPSHPKPAPQVCDPYYEM 170
+ S P +C Y++
Sbjct: 831 SE-------STPCSGTCLCHNTYDL 848
Score = 40.8 bits (94), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 74 TTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
+ S P S + P +P + P +P + P NP + P +P + P NP + P +P +
Sbjct: 767 SESTPGSPSESTPGSPSESTPGSPSESTPGNPSESTPGSPSESTPGNPSESTPGSPSEST 826
Query: 134 PANPPNKYP 142
P +P P
Sbjct: 827 PGSPSESTP 835
Score = 37.4 bits (85), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 74 TTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
+ S P S + P +P + P NP + P +P + P NP + P +P + P +P +
Sbjct: 775 SESTPGSPSESTPGSPSESTPGNPSESTPGSPSESTPGNPSESTPGSPSESTPGSPSEST 834
Query: 134 PAN 136
P +
Sbjct: 835 PCS 837
Score = 36.2 bits (82), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPNKY 141
+P + P NP + P +P + P NP + P +P + P +P + P + N Y
Sbjct: 789 SPSESTPGNPSESTPGSPSESTPGNPSESTPGSPSESTPGSPSESTPCSGTCLCHNTY 846
>M.Javanica_Scaff15012g071315 on AAA29571 CSP (Invasion) [Plasmodium falciparum]
Length = 432
Score = 31.6 bits (70), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + P + +P ANP +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANPNVDPNANP 151
Score = 31.6 bits (70), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 80 SNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
+N N P + P + +P ANP +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANPNVDPNANP 151
Score = 31.6 bits (70), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 76 SNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
+N + + P + P + +P ANP +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANPNVDPNANP 151
Score = 28.9 bits (63), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 15/66 (22%)
Query: 48 NNLSTRQPSDQPINSPVDPLSCLQDITTSNPPSNYINPPANPPANPPANPPANPPANPPA 107
+N R+P + + P D NP +P ANP +P ANP +P ANP
Sbjct: 101 DNEKLRKPKHKKLKQPGD----------GNP-----DPNANPNVDPNANPNVDPNANPNV 145
Query: 108 NPPANP 113
+P ANP
Sbjct: 146 DPNANP 151
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + P + +P ANP +P ANP +P ANP +P
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANPNVDP 147
>M.Javanica_Scaff15012g071315 on AAA63422 CSP (Invasion) [Plasmodium falciparum]
Length = 424
Score = 31.6 bits (70), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + P + +P ANP +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANPNVDPNANP 151
Score = 31.6 bits (70), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 80 SNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
+N N P + P + +P ANP +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANPNVDPNANP 151
Score = 31.6 bits (70), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 76 SNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
+N + + P + P + +P ANP +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANPNVDPNANP 151
Score = 28.5 bits (62), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 15/66 (22%)
Query: 48 NNLSTRQPSDQPINSPVDPLSCLQDITTSNPPSNYINPPANPPANPPANPPANPPANPPA 107
+N R+P + + P D NP +P ANP +P ANP +P ANP
Sbjct: 101 DNEKLRKPKHKKLKQPGD----------GNP-----DPNANPNVDPNANPNVDPNANPNV 145
Query: 108 NPPANP 113
+P ANP
Sbjct: 146 DPNANP 151
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + P + +P ANP +P ANP +P ANP +P
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANPNVDP 147
>M.Javanica_Scaff15012g071315 on BAD73955 CSP (Invasion) [Plasmodium falciparum]
Length = 428
Score = 31.6 bits (70), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + P + +P ANP +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANPNVDPNANP 151
Score = 31.6 bits (70), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 80 SNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
+N N P + P + +P ANP +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANPNVDPNANP 151
Score = 31.6 bits (70), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 76 SNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
+N + + P + P + +P ANP +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANPNVDPNANP 151
Score = 28.5 bits (62), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 15/66 (22%)
Query: 48 NNLSTRQPSDQPINSPVDPLSCLQDITTSNPPSNYINPPANPPANPPANPPANPPANPPA 107
+N R+P + + P D NP +P ANP +P ANP +P ANP
Sbjct: 101 DNEKLRKPKHKKLKQPGD----------GNP-----DPNANPNVDPNANPNVDPNANPNV 145
Query: 108 NPPANP 113
+P ANP
Sbjct: 146 DPNANP 151
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + P + +P ANP +P ANP +P ANP +P
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANPNVDP 147
>M.Javanica_Scaff15012g071315 on XP_806228 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1204
Score = 30.8 bits (68), Expect = 0.13, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Query: 40 TPSTAQQNNNLSTRQPSDQPINSPVDPLSCLQDITTSNPPSNYINPPANPPANPPANPPA 99
TPST ++ ST PS +S S D + PS ++ A+ + P + A
Sbjct: 796 TPSTPVDSSAHST--PSTPVDSSAHSTPSTPADSSAHGTPSTPVDSSAHGTPSTPVDSSA 853
Query: 100 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPNKYPNQPPKNNYPSNP 154
+ + P + A+ + PA+ A+ + P + A+ + P ++ PS P
Sbjct: 854 HSTPSTPVDSSAHSTPSTPADSSAHGTPSTPVDSSAHSTHSTPVDSSAHSTPSTP 908
Score = 28.5 bits (62), Expect = 0.61, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Query: 40 TPSTAQQNNNLSTRQPSDQPINSPVDPLSCLQDITTSNPPSNYINPPANPPANPPANPPA 99
TPST ++ ST PS +S S D + PS ++ A+ + P + A
Sbjct: 760 TPSTPVDSSAHST--PSTPVDSSAHGTPSTPVDSSAHGTPSTPVDSSAHSTPSTPVDSSA 817
Query: 100 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPNKYPNQPPKNNYPSNPS---- 155
+ + PA+ A+ + P + A+ + P + A+ P ++ PS P+
Sbjct: 818 HSTPSTPADSSAHGTPSTPVDSSAHGTPSTPVDSSAHSTPSTPVDSSAHSTPSTPADSSA 877
Query: 156 HPKPAPQV 163
H P+ V
Sbjct: 878 HGTPSTPV 885
Score = 28.1 bits (61), Expect = 0.90, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 11/131 (8%)
Query: 38 PITPSTAQQNNNLSTRQPSDQPIN-SPVDPLSCLQDITTSNPPSNYINPPANPPANPPAN 96
P TP+ + + ST P D + +P P+ D + + PS ++ A+ + PA+
Sbjct: 821 PSTPADSSAHGTPST--PVDSSAHGTPSTPV----DSSAHSTPSTPVDSSAHSTPSTPAD 874
Query: 97 PPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPNKYPNQPPKNNYPSNP-- 154
A+ + P + A+ + P + A+ + P + A+ P + PS P
Sbjct: 875 SSAHGTPSTPVDSSAHSTHSTPVDSSAHSTPSTPVDSSAHGTPSTPVDSSAHGTPSTPVD 934
Query: 155 --SHPKPAPQV 163
+H P+ V
Sbjct: 935 SSAHSTPSTPV 945
Score = 27.7 bits (60), Expect = 0.97, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 5/101 (4%)
Query: 62 SPVDPLSCLQDITTSNPPSNYINPPANPPANP-----PANPPANPPANPPANPPANPPAN 116
+P P+ T S P + + + PA+ P+ P + P+ P + +
Sbjct: 676 TPSTPVDSSAHGTPSTPVDSSAHSTPSTPADSSAHGTPSTPVDSSAHGTPSTPVDSSAHS 735
Query: 117 PPANPPANPPANPPANPPANPPNKYPNQPPKNNYPSNPSHP 157
P+ P + P+ P + + P+ P ++ S PS P
Sbjct: 736 TPSTPVDSSAHGTPSTPVDSSAHGTPSTPVDSSAHSTPSTP 776
Score = 26.9 bits (58), Expect = 2.0, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 4/104 (3%)
Query: 72 DITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPA 131
D + PS ++ A+ + P + A+ + PA+ A+ + P + A+ + P
Sbjct: 670 DSSAHGTPSTPVDSSAHGTPSTPVDSSAHSTPSTPADSSAHGTPSTPVDSSAHGTPSTPV 729
Query: 132 NPPANPPNKYPNQPPKNNYPSNP----SHPKPAPQVCDPYYEMP 171
+ A+ P + PS P +H P+ V + P
Sbjct: 730 DSSAHSTPSTPVDSSAHGTPSTPVDSSAHGTPSTPVDSSAHSTP 773
>M.Javanica_Scaff15012g071315 on AAN87581 CSP (Invasion) [Plasmodium falciparum]
Length = 385
Score = 29.3 bits (64), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
Score = 29.3 bits (64), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 70 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
>M.Javanica_Scaff15012g071315 on AAN87580 CSP (Invasion) [Plasmodium falciparum]
Length = 385
Score = 29.3 bits (64), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
Score = 29.3 bits (64), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
Score = 26.9 bits (58), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 70 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
>M.Javanica_Scaff15012g071315 on AAN87583 CSP (Invasion) [Plasmodium falciparum]
Length = 397
Score = 28.5 bits (62), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
Score = 28.5 bits (62), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
Score = 26.9 bits (58), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 70 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
>M.Javanica_Scaff15012g071315 on BAD73957 CSP (Invasion) [Plasmodium falciparum]
Length = 389
Score = 28.5 bits (62), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
Score = 28.5 bits (62), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
Score = 26.6 bits (57), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 70 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
>M.Javanica_Scaff15012g071315 on AAN87582 CSP (Invasion) [Plasmodium falciparum]
Length = 397
Score = 28.5 bits (62), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
Score = 28.5 bits (62), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
Score = 26.6 bits (57), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 70 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
>M.Javanica_Scaff15012g071315 on AAW78216 CSP (Invasion) [Plasmodium falciparum]
Length = 362
Score = 28.5 bits (62), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 28.5 bits (62), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.6 bits (57), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 73 ITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 57 LGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAW78199 CSP (Invasion) [Plasmodium falciparum]
Length = 386
Score = 28.5 bits (62), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 28.5 bits (62), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.6 bits (57), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 55 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAW78211 CSP (Invasion) [Plasmodium falciparum]
Length = 366
Score = 28.5 bits (62), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 28.5 bits (62), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.6 bits (57), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 73 ITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 57 LGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAW78202 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 28.5 bits (62), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 28.5 bits (62), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.6 bits (57), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 73 ITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 57 LGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAW78219 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 28.5 bits (62), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 28.5 bits (62), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.6 bits (57), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 73 ITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 57 LGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on BAD73951 CSP (Invasion) [Plasmodium falciparum]
Length = 408
Score = 28.5 bits (62), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 28.5 bits (62), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 28.1 bits (61), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 81 NYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 77 NPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAN87592 CSP (Invasion) [Plasmodium falciparum]
Length = 396
Score = 28.5 bits (62), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 28.5 bits (62), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.7 bits (60), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 81 NYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 77 NPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAN87593 CSP (Invasion) [Plasmodium falciparum]
Length = 396
Score = 28.5 bits (62), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 28.5 bits (62), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.7 bits (60), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 81 NYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 77 NPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAW78203 CSP (Invasion) [Plasmodium falciparum]
Length = 382
Score = 28.1 bits (61), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 28.1 bits (61), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.6 bits (57), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 55 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAA63153 CSP (Invasion) [Plasmodium falciparum]
Length = 408
Score = 28.1 bits (61), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 28.1 bits (61), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.7 bits (60), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 81 NYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 77 NPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAW78195 CSP (Invasion) [Plasmodium falciparum]
Length = 378
Score = 28.1 bits (61), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 28.1 bits (61), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.6 bits (57), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 73 ITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 57 LGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAW78192 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 28.1 bits (61), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 28.1 bits (61), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.2 bits (56), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 55 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAA29521 CSP (Invasion) [Plasmodium falciparum]
Length = 397
Score = 28.1 bits (61), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
Score = 28.1 bits (61), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
Score = 26.2 bits (56), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 70 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 124
>M.Javanica_Scaff15012g071315 on AAN87605 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 28.1 bits (61), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 28.1 bits (61), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.7 bits (60), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 81 NYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 77 NPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAW78200 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 28.1 bits (61), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 28.1 bits (61), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.2 bits (56), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 55 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAW78194 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 28.1 bits (61), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 28.1 bits (61), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.2 bits (56), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 55 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAW78217 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 28.1 bits (61), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 28.1 bits (61), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 25.8 bits (55), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 76 SNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
+N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 64 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAW78178 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 28.1 bits (61), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 28.1 bits (61), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.2 bits (56), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 55 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAW78220 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 28.1 bits (61), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 28.1 bits (61), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.2 bits (56), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 55 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAN87598 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 28.1 bits (61), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 28.1 bits (61), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 77 NPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 81 NYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAN87579 CSP (Invasion) [Plasmodium falciparum]
Length = 393
Score = 28.1 bits (61), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + P + +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 124
Score = 28.1 bits (61), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + P + +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 124
Score = 26.2 bits (56), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + P + +P ANP +P ANP +P ANP
Sbjct: 70 RSLGENDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 124
>M.Javanica_Scaff15012g071315 on AAN87614 CSP (Invasion) [Plasmodium falciparum]
Length = 416
Score = 28.1 bits (61), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 28.1 bits (61), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.9 bits (58), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 81 NYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.9 bits (58), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 77 NPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAW78205 CSP (Invasion) [Plasmodium falciparum]
Length = 378
Score = 28.1 bits (61), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 28.1 bits (61), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.2 bits (56), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 55 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAN87611 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 28.1 bits (61), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 28.1 bits (61), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.9 bits (58), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 81 NYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.9 bits (58), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 77 NPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAN87587 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 28.1 bits (61), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 28.1 bits (61), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.9 bits (58), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 81 NYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.9 bits (58), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 77 NPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAN87589 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 28.1 bits (61), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 28.1 bits (61), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.9 bits (58), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 81 NYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.6 bits (57), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 78 PPSNYINPPANPPANPPANPPANPPANPPANPPANP 113
P + PA+ +P ANP +P ANP +P ANP
Sbjct: 108 PKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAW78182 CSP (Invasion) [Plasmodium falciparum]
Length = 397
Score = 27.7 bits (60), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 82 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 128
Score = 27.7 bits (60), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 82 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 128
Score = 27.3 bits (59), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 83 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 128
Score = 26.9 bits (58), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 80 SNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 83 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 128
Score = 26.9 bits (58), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 76 SNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
+N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 83 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 128
>M.Javanica_Scaff15012g071315 on AAN87594 CSP (Invasion) [Plasmodium falciparum]
Length = 396
Score = 27.7 bits (60), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNENLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.7 bits (60), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNENLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNENLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.9 bits (58), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 77 NPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNENLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.9 bits (58), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 81 NYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNENLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAN87577 CSP (Invasion) [Plasmodium falciparum]
Length = 389
Score = 27.7 bits (60), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + P + +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 124
Score = 27.7 bits (60), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + P + +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 124
Score = 25.8 bits (55), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + P + +P ANP +P ANP +P ANP
Sbjct: 70 RSLGENDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 124
>M.Javanica_Scaff15012g071315 on AAN87578 CSP (Invasion) [Plasmodium falciparum]
Length = 393
Score = 27.7 bits (60), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + P + +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 124
Score = 27.7 bits (60), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + P + +P ANP +P ANP +P ANP
Sbjct: 75 NDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 124
Score = 25.8 bits (55), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + P + +P ANP +P ANP +P ANP
Sbjct: 70 RSLGENDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 124
>M.Javanica_Scaff15012g071315 on AAN87602 CSP (Invasion) [Plasmodium falciparum]
Length = 412
Score = 27.7 bits (60), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.7 bits (60), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.9 bits (58), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 76 SNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
+N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.9 bits (58), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 80 SNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAN87609 CSP (Invasion) [Plasmodium falciparum]
Length = 408
Score = 27.7 bits (60), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.7 bits (60), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.9 bits (58), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 81 NYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.9 bits (58), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 77 NPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAW78215 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + P + +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 109
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + P + +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 109
Score = 25.4 bits (54), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + P + +P ANP +P ANP +P ANP
Sbjct: 55 RSLGENDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAN87595 CSP (Invasion) [Plasmodium falciparum]
Length = 392
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 77 NPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 99 NEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAW78186 CSP (Invasion) [Plasmodium falciparum]
Length = 397
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 82 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 128
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 82 GNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 128
Score = 26.9 bits (58), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 83 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 128
Score = 26.6 bits (57), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 80 SNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 83 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 128
Score = 26.6 bits (57), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 76 SNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
+N + + P + PA+ +P ANP +P ANP +P ANP
Sbjct: 83 NNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 128
>M.Javanica_Scaff15012g071315 on AAA29545 CSP (Invasion) [Plasmodium falciparum]
Length = 436
Score = 27.3 bits (59), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + P + +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + P + +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.6 bits (57), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + P + +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.2 bits (56), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 80 SNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+N N P + P + +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.2 bits (56), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 76 SNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
+N + + P + P + +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAW78209 CSP (Invasion) [Plasmodium falciparum]
Length = 370
Score = 26.9 bits (58), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.9 bits (58), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
Score = 25.4 bits (54), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 71 QDITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ + ++ +N N P + PA+ +P ANP +P ANP +P ANP
Sbjct: 55 RSLGENDDGNNEDNEKLRKPKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANP 109
>M.Javanica_Scaff15012g071315 on AAA29550 CSP (Invasion) [Plasmodium falciparum]
Length = 416
Score = 27.3 bits (59), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 87 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N P + P + +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 143
Score = 27.3 bits (59), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 91 ANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N P + P + +P ANP +P ANP +P ANP
Sbjct: 97 GNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.6 bits (57), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 129
N N P + P + +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.2 bits (56), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 80 SNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+N N P + P + +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 143
Score = 26.2 bits (56), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 76 SNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANP 121
+N + + P + P + +P ANP +P ANP +P ANP
Sbjct: 98 NNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 143
>M.Javanica_Scaff15012g071315 on AAW78189 CSP (Invasion) [Plasmodium falciparum]
Length = 374
Score = 26.9 bits (58), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 84 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 133
N N N P + P + +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 109
Score = 26.9 bits (58), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 88 NPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 137
N N N P + P + +P ANP +P ANP +P ANP
Sbjct: 60 NDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 109
Score = 25.4 bits (54), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 73 ITTSNPPSNYINPPANPPANPPANPPANPPANPPANPPANPPANPPANPPANP 125
+ ++ +N N P + P + +P ANP +P ANP +P ANP
Sbjct: 57 LGENDDGNNEDNEKLRKPKHKKLKQPGDGNPDPNANPNVDPNANPNVDPNANP 109
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13580g067701
(234 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.6
AAK07771 MSA-1 (Invasion) [Babesia bovis] 25 5.9
AAK07772 MSA-1 (Invasion) [Babesia bovis] 25 6.0
XP_812546 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.0
XP_821769 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.0
XP_804648 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.9
>M.Javanica_Scaff13580g067701 on XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 24.6 bits (52), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 111 HENADNRRISPYETSSIRSIDCEN 134
H + RI+ +E S + +DCEN
Sbjct: 330 HPKCETPRITEWEGSLLMIVDCEN 353
>M.Javanica_Scaff13580g067701 on AAK07771 MSA-1 (Invasion) [Babesia bovis]
Length = 334
Score = 24.6 bits (52), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 59 CCSVLVNGTDPVISESALMETPTSNYSQNPP 89
C S + + ++ + ESA + TPT+ NPP
Sbjct: 13 CVSAIASSSEDLAQESAQISTPTNVRIINPP 43
>M.Javanica_Scaff13580g067701 on AAK07772 MSA-1 (Invasion) [Babesia bovis]
Length = 339
Score = 24.6 bits (52), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 59 CCSVLVNGTDPVISESALMETPTSNYSQNPP 89
C S + + ++ + ESA + TPT+ NPP
Sbjct: 13 CVSAIASSSEDLAQESAQISTPTNVRIINPP 43
>M.Javanica_Scaff13580g067701 on XP_812546 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 24.3 bits (51), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 116 NRRISPYETSSIRSIDCEN 134
N RI+ +E S + +DCEN
Sbjct: 321 NPRITEWEGSLLMIVDCEN 339
>M.Javanica_Scaff13580g067701 on XP_821769 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 24.3 bits (51), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 116 NRRISPYETSSIRSIDCEN 134
N RI+ +E S + +DCEN
Sbjct: 321 NPRITEWEGSLLMIVDCEN 339
>M.Javanica_Scaff13580g067701 on XP_804648 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 23.9 bits (50), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Query: 36 PSTPPPNLSSYDHRGIRNDS--RGGCCSVLVNGTDPVISESALMETPTSNYSQNPPLFGR 93
P P +SS H+G +S GG ++ +GT V S A+ E +N +F
Sbjct: 261 PKPLPKLISSASHKGEWTESIASGGSGVLMEDGT-IVFSLMAVNE-------KNDGVFSL 312
Query: 94 IKRAKVEPS-HLLGGLEDHENADNRRISPYETSSIRSIDCEN 134
I +K S L N + RI+ +E S + +DCEN
Sbjct: 313 IIYSKDNGSTWALSKGVSPANCTDPRITEWEGSLLMIVDCEN 354
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15635g072796
(164 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.5
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 24 4.9
XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.4
>M.Javanica_Scaff15635g072796 on XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 25.8 bits (55), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 15 AVAVEEAVAGAAGVVVEEGVDVVDARSAAVQPHYKTDDT 53
A+ E + +G GV + +GVD+ A++ VQP TD +
Sbjct: 84 AITAEGSASG--GVELPQGVDLFVAQTTQVQPKKGTDSS 120
>M.Javanica_Scaff15635g072796 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 24.3 bits (51), Expect = 4.9, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 61 KQVIEEAAVQPHYKTDDTPCPQAAWKQVIEESITDNDAIASVN 103
K ++E+ QP +K PCP E+SI N A S N
Sbjct: 1575 KTILEKFQDQPEFKKAIGPCPNLGQ---FEDSIHCNGAARSEN 1614
>M.Javanica_Scaff15635g072796 on XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 830
Score = 23.5 bits (49), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 15 AVAVEEAVAGAAGVVVEEGVDVVDARSAAVQPHYKTDDT 53
A+ E + +G GV + +G+D+ A++ VQP D +
Sbjct: 83 AITAEGSASG--GVELPQGIDLFVAQTTQVQPKKGNDSS 119
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14965g071202
(195 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350954 RESA (Others) [Plasmodium falciparum] 32 0.021
XP_001609100 variant erythrocyte surface antigen-1, beta subuni... 24 7.7
>M.Javanica_Scaff14965g071202 on XP_001350954 RESA (Others) [Plasmodium falciparum]
Length = 654
Score = 32.0 bits (71), Expect = 0.021, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 55 PLGVVDFCDLGKGLMAINGTLTGLPPGLHGFHVHQFGDLSQLCTGAG---LHFNPHNRRH 111
PLG+ D + GK +AI L P GL + +G ++ CT G + + P + +
Sbjct: 214 PLGMNDEDEEGKEALAIKDKL---PGGLDEYQNQLYGICNETCTTCGPAAIDYVPADAPN 270
Query: 112 GAPHDSERHVGDLGNIQADEN 132
G + H G GN++ +N
Sbjct: 271 GYAYGGSAHDGSHGNLRGHDN 291
>M.Javanica_Scaff14965g071202 on XP_001609100 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1093
Score = 23.9 bits (50), Expect = 7.7, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 62 CDLGKGLMAINGTL--TGLPPGLHGFHVHQFGDLSQLCTGAGLHFNPHN 108
CD G G+ + TG+ P L+ + +G++S+L T G H HN
Sbjct: 945 CDGGDGVCKCPSVVSCTGVLPVLYKYGF-GYGNVSKLHTTGGTHKKCHN 992
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15340g072106
(231 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.67
XP_001349735 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.7
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.1
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 25 6.1
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 25 6.3
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 25 6.3
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 25 6.3
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 25 6.3
XP_001608668 variant erythrocyte surface antigen-1, alpha subun... 24 7.7
XP_001352240 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.2
>M.Javanica_Scaff15340g072106 on XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 867
Score = 27.7 bits (60), Expect = 0.67, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 50 NTPSEVLTTSSSSLSNKERLVWKVGDRCLATSKGGQKQVAVIDGISQDKVAITFAN 105
N P V T++ L LVW + C A + GG K ID + K +I+FAN
Sbjct: 38 NMPRRVFTSTVLLLF----LVWMICCDCGAAAAGGSKTRNTIDPF-KGKTSISFAN 88
>M.Javanica_Scaff15340g072106 on XP_001349735 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 431
Score = 25.0 bits (53), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 142 WHLERERRKVRAQKKEQRRKQMEEQKEVEKNKWKNFNARANAKNMKHIEATGSAADGPKG 201
+H +R + +K E +++ + KE KW+N N N + H+ T + +
Sbjct: 288 FHKWLDRHRDMCEKWENHHERLAKLKE----KWENDNDGGNVPSDNHVLNTDVSIEIDMD 343
Query: 202 QKGPPRGLSSLDVS 215
P S++D++
Sbjct: 344 NPKPINQFSNMDIN 357
>M.Javanica_Scaff15340g072106 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 25.0 bits (53), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 93 GISQDKVAITFANSGKKDMVRLSDLSIAPIEEKKKYIFQTGKQNAMKKEW-HLERERRKV 151
G D++ TF N +K R+ S P K F TG K+W H+ +E+
Sbjct: 785 GCQGDQLDATFCNIDEKYSNRIPRKSEGPCYGKNPQRFYTG------KDWTHVVQEKTSY 838
Query: 152 RAQKKEQRRKQM 163
+ RR+ M
Sbjct: 839 KDVFLPPRREHM 850
>M.Javanica_Scaff15340g072106 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 24.6 bits (52), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 29 ELIKLKEDLNEIIILQQELVTNTPS 53
E+IK+KED+N I I Q ++ N +
Sbjct: 588 EIIKMKEDINHIHIYIQPILNNLHT 612
>M.Javanica_Scaff15340g072106 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 24.6 bits (52), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 29 ELIKLKEDLNEIIILQQELVTNTPS 53
E+IK+KED+N I I Q ++ N +
Sbjct: 588 EIIKMKEDINHIHIYIQPILNNLHT 612
>M.Javanica_Scaff15340g072106 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 24.6 bits (52), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 29 ELIKLKEDLNEIIILQQELVTNTPS 53
E+IK+KED+N I I Q ++ N +
Sbjct: 588 EIIKMKEDINHIHIYIQPILNNLHT 612
>M.Javanica_Scaff15340g072106 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 24.6 bits (52), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 29 ELIKLKEDLNEIIILQQELVTNTPS 53
E+IK+KED+N I I Q ++ N +
Sbjct: 588 EIIKMKEDINHIHIYIQPILNNLHT 612
>M.Javanica_Scaff15340g072106 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 24.6 bits (52), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 29 ELIKLKEDLNEIIILQQELVTNTPS 53
E+IK+KED+N I I Q ++ N +
Sbjct: 588 EIIKMKEDINHIHIYIQPILNNLHT 612
>M.Javanica_Scaff15340g072106 on XP_001608668 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1337
Score = 24.3 bits (51), Expect = 7.7, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 134 KQNAMKKEWHLERERRKVRAQKKEQRRKQMEEQKEVEKNKWKNFNARANAKNMKHIEATG 193
KQ + + LE+ + V ++ ++ E +K VEK K + N R AK K ++A
Sbjct: 721 KQKLGEAKKELEKAKEAVESEVGMDGKELEEAKKAVEKAKTEGDNVRM-AKLEKKMKALE 779
Query: 194 SAADG 198
+A D
Sbjct: 780 NAKDA 784
>M.Javanica_Scaff15340g072106 on XP_001352240 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1315
Score = 24.3 bits (51), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 142 WHLERERRKVRAQKKEQRRKQMEEQKEVEKNKWKNFNARANAKNMKHIEATGSAADGPKG 201
+H +R + +K E +++ + KE KW+N N N + H+ T + +
Sbjct: 1172 FHKWLDRHRDMCEKWENHHERLAKLKE----KWENDNDGGNVPSGNHVLNTDVSIEIDMD 1227
Query: 202 QKGPPRGLSSLDVS 215
P S++D++
Sbjct: 1228 NPKPINQFSNMDIN 1241
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff133g002405
(152 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.0
XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.4
XP_814623 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.9
XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.7
>M.Javanica_Scaff133g002405 on XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 26.2 bits (56), Expect = 1.0, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 30 EWKRRILYCSPSKDGKHSGQCYLTVGKEEKPKLAKCHEESFKLETG 75
E ++R+ P+ + G+ Y+ VGK +A+C S K+++G
Sbjct: 156 EEEKRVDVSRPTAVAE-GGKIYMLVGKHSHEDVAECKATSEKIKSG 200
>M.Javanica_Scaff133g002405 on XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 24.6 bits (52), Expect = 3.4, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 30 EWKRRILYCSPSKDGKHSGQCYLTVGKEEKPKLAKCHEESFKLETG 75
E +RR+ P+ + G+ Y+ VGK +A+C S K ++G
Sbjct: 156 EEERRVDVSRPTAVVE-GGKIYMLVGKHSHGDVAECKATSEKTKSG 200
>M.Javanica_Scaff133g002405 on XP_814623 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 895
Score = 24.3 bits (51), Expect = 3.9, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 51 YLTVGKEEKPKLAKCHEESFKLETG 75
Y+ VGK LA+C S K ++G
Sbjct: 194 YMLVGKHSHENLAECKATSEKFKSG 218
>M.Javanica_Scaff133g002405 on XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 883
Score = 23.9 bits (50), Expect = 5.7, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 51 YLTVGKEEKPKLAKCHEESFKLETG 75
Y+ VGK A C E+ K+++G
Sbjct: 181 YMLVGKHSHEAAANCQAETEKIKSG 205
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13675g067978
(94 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814818 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.1
>M.Javanica_Scaff13675g067978 on XP_814818 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 22.3 bits (46), Expect = 6.1, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 9 SKNPFKLSFRSSLNCILNSLLRCWLLQTSSQINNRNVWRRHT 50
+K P S + S + + + W T N+ WR HT
Sbjct: 146 AKKPHTESTKPSSDVVAGYIDSAWEWPTVVDEVNKETWRAHT 187
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1575g016772
(110 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.0
XP_001611442 variant erythrocyte surface antigen-1, alpha subun... 24 3.4
XP_001612315 variant erythrocyte surface antigen-1, beta subuni... 23 3.9
>M.Javanica_Scaff1575g016772 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 24.3 bits (51), Expect = 2.0, Method: Composition-based stats.
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 77 GRKRREATKAKREDNN 92
GR RREA AK D+N
Sbjct: 887 GRHRREANPAKASDSN 902
>M.Javanica_Scaff1575g016772 on XP_001611442 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1350
Score = 23.9 bits (50), Expect = 3.4, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 9/40 (22%)
Query: 23 NAQFNYNQRGGTCCCCSE--YAQHP-VPYSSCC----GRR 55
N ++ GG+ CCCS AQH P+ CC GRR
Sbjct: 141 NCKYGGKGHGGSQCCCSSGGAAQHKGSPW--CCKENGGRR 178
>M.Javanica_Scaff1575g016772 on XP_001612315 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1140
Score = 23.5 bits (49), Expect = 3.9, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 11/23 (47%)
Query: 31 RGGTCCCCSEYAQHPVPYSSCCG 53
RGGT CC S A S CG
Sbjct: 162 RGGTNCCNSASAATTCHECSTCG 184
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13399g067243
(166 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829775 VSG (Establishment) [Trypanosoma brucei] 25 1.7
XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.0
>M.Javanica_Scaff13399g067243 on XP_829775 VSG (Establishment) [Trypanosoma brucei]
Length = 503
Score = 25.4 bits (54), Expect = 1.7, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 110 MARNMSCVAAIADYKFAYSGNGDYVSALNGEAELGPSELNCE 151
+A+ +S +AA K GN D S + E + PS+ C+
Sbjct: 394 IAKAISYLAATNQIKQTIEGNKDQCSTVEKEKKQSPSKEECK 435
>M.Javanica_Scaff13399g067243 on XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 23.9 bits (50), Expect = 7.0, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 41 KLDLLQYKLEQQWQLRLNFNFTKTATET 68
KL L Y E++WQL N TK + T
Sbjct: 615 KLMELSYDSEKKWQLLCGGNTTKENSNT 642
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1513g016277
(608 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAA87406 AP65-1 (Adhesin) [Trichomonas vaginalis] 27 2.0
AAA87407 AP65-2 (Adhesin) [Trichomonas vaginalis] 27 2.1
AAA91133 AP65-3 (Adhesin) [Trichomonas vaginalis] 27 2.1
XP_805710 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.4
>M.Javanica_Scaff1513g016277 on AAA87406 AP65-1 (Adhesin) [Trichomonas vaginalis]
Length = 255
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 394 YHAYKQKYMDIIVGPESSPRLKDILK 419
+ ++Q Y I + PE S ++KDIL+
Sbjct: 123 WATHRQSYRGIYITPEDSGKIKDILR 148
>M.Javanica_Scaff1513g016277 on AAA87407 AP65-2 (Adhesin) [Trichomonas vaginalis]
Length = 255
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 394 YHAYKQKYMDIIVGPESSPRLKDILK 419
+ ++Q Y I + PE S ++KDIL+
Sbjct: 123 WATHRQSYRGIYITPEDSGKIKDILR 148
>M.Javanica_Scaff1513g016277 on AAA91133 AP65-3 (Adhesin) [Trichomonas vaginalis]
Length = 255
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 394 YHAYKQKYMDIIVGPESSPRLKDILK 419
+ ++Q Y I + PE S ++KDIL+
Sbjct: 123 WATHRQSYRGIYITPEDSGKIKDILR 148
>M.Javanica_Scaff1513g016277 on XP_805710 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 26.6 bits (57), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Query: 455 IMVFVEGKARFRLHGKMDLFVRPKNITQQKEQILRSETTLTSNVN 499
++ V+GK RF D+ +RP T+ + L + +++ SNVN
Sbjct: 171 VLGKVDGKERF------DVVLRPTTTTKDNKVFLLAGSSVASNVN 209
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13661g067936
(227 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAD92130 TashHN (Establishment) [Theileria annulata] 25 4.3
XP_828095 VSG (Establishment) [Trypanosoma brucei] 24 8.7
>M.Javanica_Scaff13661g067936 on CAD92130 TashHN (Establishment) [Theileria annulata]
Length = 332
Score = 25.0 bits (53), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 72 IFNVRKLNSVLLRRQILKAKVLILT---KKKN-QIFHPKIELTPLP 113
I+ RK + ++ + K+L L+ K+ N +IFHPK E P+P
Sbjct: 108 IYCKRKDEYFEIDQKTYQEKILSLSTIQKEDNTKIFHPKTEYYPIP 153
>M.Javanica_Scaff13661g067936 on XP_828095 VSG (Establishment) [Trypanosoma brucei]
Length = 517
Score = 23.9 bits (50), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 172 ENSLPNTYRIVKISGKFDENSAL--SLSQNKFHQREYKNNYKTI 213
E LP ++ + + AL S++++K+ Q+ YK NY+ I
Sbjct: 51 EGELPPDEQVTDSANAVRQLEALNMSVAEDKWRQQFYKGNYEKI 94
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15286g071979
(206 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.41
XP_827749 VSG (Establishment) [Trypanosoma brucei] 25 4.4
>M.Javanica_Scaff15286g071979 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 28.1 bits (61), Expect = 0.41, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 123 TRLNRSPDVIVYYNWLLYKLDQLSRNDNENLFKFTQRRLKD 163
TRL PD + L ++S DNE +F+ T++ KD
Sbjct: 1350 TRLQNLPDAAAFLQKLGSCSKKVSEKDNEKIFEDTEQTFKD 1390
>M.Javanica_Scaff15286g071979 on XP_827749 VSG (Establishment) [Trypanosoma brucei]
Length = 516
Score = 24.6 bits (52), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 132 IVYYNWLLYKLDQLSRNDNENLFKFTQRRLKDLSLTMGTD 171
+ N + KL LS ++++F+ TQ++LKD + D
Sbjct: 246 VTSNNIQIAKLTNLSSAADQSVFENTQKKLKDFDVHKADD 285
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1468g015942
(138 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.6
XP_802557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.9
>M.Javanica_Scaff1468g015942 on XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 23.1 bits (48), Expect = 7.6, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 86 IGSTVRNTVRNKIPISSIHTVPALVLITKLVTHKIDSTWSDIYV 129
I S ++ +N S + ++P L+ L D TWSD Y+
Sbjct: 470 INSVLKTWAQNDAFFSKL-SIPTAGLVAVLSDAASDDTWSDEYL 512
>M.Javanica_Scaff1468g015942 on XP_802557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 608
Score = 23.1 bits (48), Expect = 7.9, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 105 TVPALVLITKLVTHKIDSTWSDIYV 129
TVP VL+ L + D+TW D Y+
Sbjct: 341 TVPTDVLVGFLSGNFSDNTWKDEYL 365
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14435g069889
(256 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.1
AAK51546 M2AP (Invasion) [Toxoplasma gondii] 26 1.7
XP_001609540 variant erythrocyte surface antigen-1, alpha subun... 25 4.6
>M.Javanica_Scaff14435g069889 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 27.3 bits (59), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 63 YTRRESFWPRNFSNF-------VKFESRFRQSSVFIFTSTSTNECRTRVNGKPRVNRNSY 115
Y RE +W N + V+ FRQ+ T+ STN+CR VN P +
Sbjct: 248 YQLREDWWEANRAKVWEAMTCSVEDAYYFRQTCGGEKTA-STNKCRC-VNTDPPTYFDYV 305
Query: 116 SAKCEW--NGCGSVFSIKDAFVEHVKEHTEDQTGKSRYCNWTG--CDGKVILRNNF 167
W IK+ +E+VK + +YC+ G C G +I RN F
Sbjct: 306 PQYLRWFEEWAEEFCRIKELKLENVKTRCRGEKDGEKYCSRNGYDCTGTIIKRNIF 361
>M.Javanica_Scaff14435g069889 on AAK51546 M2AP (Invasion) [Toxoplasma gondii]
Length = 255
Score = 26.2 bits (56), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 144 DQTGKSRYCNWTGCDGKVILRNNFARHIRKHTGEKLYVCKYVDQNGVICN 193
D+ GK N++G D I + I+ H ++VC D + + C+
Sbjct: 118 DKAGKCFLKNFSGEDSSEIDEKEVSLPIKSHNDAFMFVCSSNDGSALQCD 167
>M.Javanica_Scaff14435g069889 on XP_001609540 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1349
Score = 25.4 bits (54), Expect = 4.6, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 151 YCNWTG--CDGKVILRNNFARHIRKHTGEKLYVCKYVDQN 188
+CN +G C + RN F IR TG++LY Y N
Sbjct: 937 HCNGSGQCCPLPMGFRNQFYSGIRDCTGKRLYGILYFFSN 976
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15447g072344
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610197 variant erythrocyte surface antigen-1, beta subuni... 22 4.8
XP_821405 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.2
>M.Javanica_Scaff15447g072344 on XP_001610197 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1123
Score = 22.3 bits (46), Expect = 4.8, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 12 LISKLISGQGPPPKNGIKIPE 32
+ KL+SG P K+GI+ E
Sbjct: 306 FVQKLLSGTDPSGKDGIQWKE 326
>M.Javanica_Scaff15447g072344 on XP_821405 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 851
Score = 21.9 bits (45), Expect = 8.2, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 7 FLSIILISKLISGQGPPPKNGIKIPENEEN 36
L+ + I + G P P G K+ +NE+N
Sbjct: 589 LLATVSIHGVPRGDTPIPLMGAKMDDNEKN 618
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13144g066588
(536 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 27 4.5
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 27 4.5
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 27 4.5
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 27 4.5
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 27 4.5
XP_001219207 VSG (Establishment) [Trypanosoma brucei] 26 4.8
XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum] 26 8.4
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 26 8.6
>M.Javanica_Scaff13144g066588 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 26.6 bits (57), Expect = 4.5, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 398 KKEVLNEFR-IPPELDDALHKKYDMAENNIDNSFGEGDGIIVEKMEEQEIIENTEETTEE 456
K+E LN+ + I +D+ L+KK ++ + I + + I+++ E + ++N T EE
Sbjct: 2234 KEEALNKQKNILRNIDNILNKKENIIDKVIKCNCDDYKDILIQNETEYQKLQNINHTYEE 2293
Query: 457 KHEEI 461
K + I
Sbjct: 2294 KKKSI 2298
>M.Javanica_Scaff13144g066588 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 26.6 bits (57), Expect = 4.5, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 398 KKEVLNEFR-IPPELDDALHKKYDMAENNIDNSFGEGDGIIVEKMEEQEIIENTEETTEE 456
K+E LN+ + I +D+ L+KK ++ + I + + I+++ E + ++N T EE
Sbjct: 2245 KEEALNKQKNILRNIDNILNKKENIIDKVIKCNCDDYKDILIQNETEYQKLQNINHTYEE 2304
Query: 457 KHEEI 461
K + I
Sbjct: 2305 KKKSI 2309
>M.Javanica_Scaff13144g066588 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 26.6 bits (57), Expect = 4.5, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 398 KKEVLNEFR-IPPELDDALHKKYDMAENNIDNSFGEGDGIIVEKMEEQEIIENTEETTEE 456
K+E LN+ + I +D+ L+KK ++ + I + + I+++ E + ++N T EE
Sbjct: 2242 KEEALNKQKNILRNIDNILNKKENIIDKVIKCNCDDYKDILIQNETEYQKLQNINHTYEE 2301
Query: 457 KHEEI 461
K + I
Sbjct: 2302 KKKSI 2306
>M.Javanica_Scaff13144g066588 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 26.6 bits (57), Expect = 4.5, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 398 KKEVLNEFR-IPPELDDALHKKYDMAENNIDNSFGEGDGIIVEKMEEQEIIENTEETTEE 456
K+E LN+ + I +D+ L+KK ++ + I + + I+++ E + ++N T EE
Sbjct: 2232 KEEALNKQKNILRNIDNILNKKENIIDKVIKCNCDDYKDILIQNETEYQKLQNINHTYEE 2291
Query: 457 KHEEI 461
K + I
Sbjct: 2292 KKKSI 2296
>M.Javanica_Scaff13144g066588 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 26.6 bits (57), Expect = 4.5, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 398 KKEVLNEFR-IPPELDDALHKKYDMAENNIDNSFGEGDGIIVEKMEEQEIIENTEETTEE 456
K+E LN+ + I +D+ L+KK ++ + I + + I+++ E + ++N T EE
Sbjct: 2238 KEEALNKQKNILRNIDNILNKKENIIDKVIKCNCDDYKDILIQNETEYQKLQNINHTYEE 2297
Query: 457 KHEEI 461
K + I
Sbjct: 2298 KKKSI 2302
>M.Javanica_Scaff13144g066588 on XP_001219207 VSG (Establishment) [Trypanosoma brucei]
Length = 453
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
Query: 139 TNQETFHVITSGLRY-------ICIEQRKAFEAVIECIDAQTDQV--EKGWKKFQKISKK 189
NQE F ++ +R I + QR EAV +DA + E WKK +
Sbjct: 25 VNQEEFEILCGFVRLTLAPAPLIQLSQRIKNEAVGAAVDAIYSEPNQEHLWKKLSPNCEA 84
Query: 190 NYFQECEGVCHVKERMAH 207
+ + E VC R H
Sbjct: 85 HQISDRESVCDAYARFKH 102
>M.Javanica_Scaff13144g066588 on XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2169
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 21/141 (14%)
Query: 142 ETFHVITSGLRYICIEQRKAFEAVIECIDAQTDQVEKGWKKFQKISKKNYFQECEGVCHV 201
E ++ I L+ C E+ + + EC+D + K WK ++ Y +E +G
Sbjct: 1481 EDYNKIKKKLK-SCTEKGEGSPCIKECVDTWITEKRKEWKTIKERYVDKYTKENDG---- 1535
Query: 202 KERMAHWAIQSGILDSFM-KGALSSLANGEAFATKMLGRQDQGLGILSGNGLH-----RN 255
S L +F+ +G SL K Q++ G H N
Sbjct: 1536 ----------SNDLTTFLQQGPFYSLVEEAKKVVKCKDEQEKLWGCTGNTTGHAQDKCEN 1585
Query: 256 AEMLNSVLEGAKRAAAEATAK 276
+ + +++ + +E T++
Sbjct: 1586 GDFITNLISKLQEKISECTSQ 1606
>M.Javanica_Scaff13144g066588 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 113 FERYRGVCLNYNNTVHCMDKLEGELCTNQETFHVITSG 150
+R+R +C +NN +DKL+ E + + ++ SG
Sbjct: 1550 LDRHRDMCEKWNNKEEVLDKLKEEWNKDNNSGNINPSG 1587
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15896g073393
(71 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15476g072423
(104 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff160g002790
(242 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 26 3.0
XP_807743 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.1
XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.2
XP_815845 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.0
XP_001611441 variant erythrocyte surface antigen-1, beta subuni... 24 9.7
>M.Javanica_Scaff160g002790 on XP_001609450 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1309
Score = 25.8 bits (55), Expect = 3.0, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 1 MDLINTGEEQQQQQQRSSLTGCTPFIVGEKPGTAASSDAM 40
+ L+ G E+Q+ + R + T F+VGE G + + + +
Sbjct: 756 LKLMKEGVEKQKTEDRKDIVDETKFVVGEISGLSLTDNKI 795
>M.Javanica_Scaff160g002790 on XP_807743 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 25.8 bits (55), Expect = 3.1, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 15/92 (16%)
Query: 75 LPEMVVAGGGGTCSSNFQNG--------YSGNLGCGGCETSTNAEQTDLAS----RAIIP 122
+P +V GT S + G +GN G GG TST+A T S +++I
Sbjct: 729 IPPVVSDNAQGTLSQSSPAGQPPSGPKLLNGNEGAGGGSTSTSAPSTATTSLGKEQSVIR 788
Query: 123 MEMQNRTGGQQQPSLRPAKSLSDLRPLTSAQA 154
+ + +GG + + S SD P A+A
Sbjct: 789 LPLGTSSGGNKNVDV---ASPSDGDPTVGAEA 817
>M.Javanica_Scaff160g002790 on XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2199
Score = 25.4 bits (54), Expect = 4.2, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 211 GGAETSGSESPSQEFYQQ 228
GGA+ SGS+S S+E Y++
Sbjct: 579 GGADGSGSKSNSKELYEE 596
>M.Javanica_Scaff160g002790 on XP_815845 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 936
Score = 25.0 bits (53), Expect = 5.0, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 15/92 (16%)
Query: 75 LPEMVVAGGGGTCSSNFQNG--------YSGNLGCGGCETSTNAEQTDLAS----RAIIP 122
+P +V GT S + G +GN G GG TST+A T S +++I
Sbjct: 735 IPPVVSDNAQGTLSQSSPAGQPPSGPKLLNGNEGVGGGSTSTSAPSTVTTSLGKEQSVIQ 794
Query: 123 MEMQNRTGGQQQPSLRPAKSLSDLRPLTSAQA 154
+ +GG + + S SD P+ A+A
Sbjct: 795 LPSGTSSGGNKNVDV---ASPSDGDPMVGAEA 823
>M.Javanica_Scaff160g002790 on XP_001611441 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1205
Score = 24.3 bits (51), Expect = 9.7, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 6/32 (18%)
Query: 81 AGGGGTCSSNFQNGYSGNLGCGGCETSTNAEQ 112
GGG C S G G G C+ +TN +Q
Sbjct: 160 GGGGAQCCS------PGTSGSGTCQCATNPKQ 185
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1487g016085
(105 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810562 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.73
XP_810529 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.96
XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.1
XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.7
XP_811678 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.9
XP_821526 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.3
XP_821677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.6
>M.Javanica_Scaff1487g016085 on XP_810562 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 874
Score = 25.4 bits (54), Expect = 0.73, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 55 DRQRREEGSEEVCYVVSLTIRYRQIKRVLADFKHEKGR 92
+RQ++E V LT + +++K VLA +K GR
Sbjct: 436 ERQKKEGKPSPGMVSVFLTEKLKRVKEVLATWKEVDGR 473
>M.Javanica_Scaff1487g016085 on XP_810529 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 791
Score = 25.0 bits (53), Expect = 0.96, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 57 QRREEGSEEVCYVVSLTIRYRQIKRVLADFKHE 89
QRR+ G + V + LT ++IK VL+ + +
Sbjct: 465 QRRDSGEDSVMSLSRLTEELKEIKSVLSTWSQK 497
>M.Javanica_Scaff1487g016085 on XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 25.0 bits (53), Expect = 1.1, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 55 DRQRREEGSEEVCYVVSLTIRYRQIKRVLADFKHEKGR 92
+RQ++E V LT + +++K VLA +K GR
Sbjct: 436 ERQKKEGKPSPGMVSVFLTEQLKRVKEVLATWKEVDGR 473
>M.Javanica_Scaff1487g016085 on XP_820147 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 878
Score = 24.3 bits (51), Expect = 1.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 39 DFEHDKRQLVIRFPFTDRQRREEGSEEVCYVVSLTIRYRQIKRVLADFKHEKGR 92
D D +L+ + +RQ++E V LT + +++K VLA +K GR
Sbjct: 426 DDTDDNEKLIALY---ERQKKEGKPSPGMVSVFLTEQLKRVKDVLATWKEVDGR 476
>M.Javanica_Scaff1487g016085 on XP_811678 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 926
Score = 24.3 bits (51), Expect = 1.9, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 51 FPFTDRQRREEGSEEVCYVVSLTI 74
FP ++ EEG+EE VSL I
Sbjct: 254 FPVEGTKKAEEGTEEGVKTVSLII 277
>M.Javanica_Scaff1487g016085 on XP_821526 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 983
Score = 23.1 bits (48), Expect = 5.3, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 40 FEHDKRQLVIRFPFTDRQRREEGSEEVCYVVSLTIRYRQIKRVLADFKHEKGRG 93
E + R+LV+ D RR S + + T+RY + RV + + KG G
Sbjct: 301 LEWEDRELVMMTSCDDGSRRVYWSGTMGKM--WTVRYGTLSRVWGNSRTRKGHG 352
>M.Javanica_Scaff1487g016085 on XP_821677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 22.3 bits (46), Expect = 7.6, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 61 EGSEEVCYVVSLTIRYRQIKRVLADFKHEKGR 92
EGS V LT + +++K VLA +K GR
Sbjct: 435 EGSSLGMVSVLLTEQLKRVKDVLATWKEVDGR 466
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13493g067478
(350 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei] 161 7e-48
P92132 CP2 (Cysteine protease) [Giardia duodenalis] 105 2e-27
CAC67416 Brucipain (Cysteine proteases) [Trypanosoma brucei] 78 6e-17
PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum] 79 6e-17
XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium falc... 76 3e-16
AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium falcipa... 76 3e-16
ABC02174 Falstatin (Others) [Plasmodium falciparum] 76 4e-16
XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium falc... 76 4e-16
XP_650937 CP5 (Cysteine protease) [Entamoeba histolytica] 69 3e-14
AAS38514 CP65 (Cysteine protease) [Trichomonas vaginalis] 62 2e-12
XP_650642 CP2 (Cysteine protease) [Entamoeba histolytica] 55 2e-09
XP_650156 CP1 (Cysteine protease) [Entamoeba histolytica] 54 3e-09
CAA54436 CP2 (Cysteine protease) [Trichomonas vaginalis] 53 4e-09
CAA54438 CP1 (Cysteine protease) [Trichomonas vaginalis] 52 1e-08
AAV98582 CP4 (Cysteine protease) [Trichomonas vaginalis] 45 2e-06
CAA38278 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 39 2e-05
EAN83733 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 39 3e-05
BAA96736 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 35 5e-04
CAA54437 CP3 (Cysteine protease) [Trichomonas vaginalis] 37 8e-04
BAA96737 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 33 0.002
CAJ20707 Toxopain-2 (Protease) [Toxoplasma gondii] 30 0.19
EAN82385 Cruzipain (Cysteine protease) [Trypanosoma cruzi] 27 0.32
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 25 5.7
>M.Javanica_Scaff13493g067478 on AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei]
Length = 340
Score = 161 bits (408), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 162/339 (47%), Gaps = 50/339 (14%)
Query: 28 DLSILQK-IVDDINGLAKGVWTAEVNTITR-LPLIEQKKLCGTIIPEENRNHTQAEPPKV 85
D +L K VD +N L +G+W A+ + + + + L E K+L G I + N+ P +
Sbjct: 28 DAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVI---KKNNNASILPKRR 84
Query: 86 EGTVKGSCSTKIEFDARTKWSGCSAIIGHIQDQGQCGSCWAVSTASTYTDRYCIARAKKG 145
+ FD+ W C I I DQ CGSCWAV+ AS +DR+C
Sbjct: 85 FTEEEARAPLPSSFDSAEAWPNC-PTIPQIADQSACGSCWAVAAASAMSDRFCT------ 137
Query: 146 QKTGTDAGSQFSALDVLSC-SMSRDGCQGGWPLDAWKWIQSKGVCTGTDIKTKGGCKPYP 204
G SA D+L+C S DGC GG P AW + S G+ + C+PYP
Sbjct: 138 --MGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLVSDY-------CQPYP 188
Query: 205 YSSGGATPRS-----PCKSACTANWKTP----------YPKDKHFATGAKGLQGNTATVQ 249
+ +S PC N+ TP P + + + LQG ++
Sbjct: 189 FPHCSHHSKSKNGYPPCSQF---NFDTPKCNYTCDDPTIPVVNYRSWTSYALQGEDDYMR 245
Query: 250 AIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANARKVGGHAVRIIGWGTQTCNGKSMP 309
E+ GP FDVY DF++Y SGVY + + +GGHAVR++GWGT NG +P
Sbjct: 246 ----ELFFRGPFEVAFDVYEDFIAYNSGVYHHVS-GQYLGGHAVRLVGWGTS--NG--VP 296
Query: 310 FWLIANSWSTGWGEKGLVKIRSGVNEVGIEKSGIAFGIP 348
+W IANSW+T WG G IR G +E GIE G A GIP
Sbjct: 297 YWKIANSWNTEWGMDGYFLIRRGSSECGIEDGGSA-GIP 334
>M.Javanica_Scaff13493g067478 on P92132 CP2 (Cysteine protease) [Giardia duodenalis]
Length = 255
Score = 105 bits (262), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 109/246 (44%), Gaps = 28/246 (11%)
Query: 56 RLPLIEQKKLCGTIIPEENRNHTQAEPPKVEGTVKGSCSTKIEFDARTKWSGCSAIIGHI 115
R + + ++ ++P + + P+ GT FD R ++ C I +
Sbjct: 38 RFEGLTKDEISSLLMPVSFLKNAKGAAPR--GTFTDKDDVPESFDFREEYPHC---IPEV 92
Query: 116 QDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDGCQGGW 175
DQG CGSCWA S+ +T+ DR C+A K ++S V+SC C GGW
Sbjct: 93 VDQGGCGSCWAFSSVATFGDRRCVAGLDKKP-------VKYSPQYVVSCDHGDMACNGGW 145
Query: 176 PLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYPKDKHFA 235
+ WK++ G T + PY SG T R C + C H A
Sbjct: 146 LPNVWKFLTKTGTTTDECV---------PYKSGSTTLRGTCPTKCADG-----SSKVHLA 191
Query: 236 TGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANARKVGGHAVRI 295
T A + + A+ + T+GP+ F V++DFM Y SGVY T + GGHAV +
Sbjct: 192 T-ATSYKDYGLDIPAMMKALSTSGPLQVAFLVHSDFMYYESGVYQHTYGYME-GGHAVEM 249
Query: 296 IGWGTQ 301
+G+GT
Sbjct: 250 VGYGTD 255
>M.Javanica_Scaff13493g067478 on CAC67416 Brucipain (Cysteine proteases) [Trypanosoma brucei]
Length = 450
Score = 78.2 bits (191), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 52/230 (22%)
Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALD---VLSCSMSRDGC 171
++DQGQCGSCWA ST ++ +A G+ +L ++SC GC
Sbjct: 141 VKDQGQCGSCWAFSTIGNIEGQWQVA------------GNPLVSLSEQMLVSCDTIDFGC 188
Query: 172 QGGWPLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSG-GATPRSPCK-----SACTANWK 225
GG +A+ WI + G ++ T+ YPY SG G P+ +A T +
Sbjct: 189 GGGLMDNAFNWIVNS---NGGNVFTEAS---YPYVSGNGEQPQCQMNGHEIGAAITDHVD 242
Query: 226 TPYPKDKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANA 285
P +D AI + NGP+ D FM Y G+ T+
Sbjct: 243 LPQDED------------------AIAAYLAENGPLAIAVDA-TSFMDYNGGIL--TSCT 281
Query: 286 RKVGGHAVRIIGWGTQTCNGKSMPFWLIANSWSTGWGEKGLVKIRSGVNE 335
+ H V ++G+ + + P+W+I NSWS WGE G ++I G N+
Sbjct: 282 SEQLDHGVLLVGYN----DSSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQ 327
>M.Javanica_Scaff13493g067478 on PF14_0553 Falcipain1 (Cysteine protease) [Plasmodium falciparum]
Length = 569
Score = 78.6 bits (192), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 99/249 (39%), Gaps = 65/249 (26%)
Query: 111 IIGHIQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDG 170
I+ +DQG CGSCWA ++ + AKK + + FS +V+ CS G
Sbjct: 344 IVHEPKDQGLCGSCWAFASVGNIESVF----AKKNKNILS-----FSEQEVVDCSKDNFG 394
Query: 171 CQGGWPLDAWKWIQSKGVCTGTDIKTKGG----CKPYPYSSGGATPRSPCKSACTANWKT 226
C GG P ++ ++ +C G + K K C Y CK
Sbjct: 395 CDGGHPFYSFLYVLQNELCLGDEYKYKAKDDMFCLNY-----------RCKRKV------ 437
Query: 227 PYPKDKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANAR 286
+ + G + A+ NE+ GP+ V NDF++Y GVY T +
Sbjct: 438 --------SLSSIGAVKENQLILAL-NEV---GPLSVNVGVNNDFVAYSEGVYNGTCSEE 485
Query: 287 KVGGHAVRIIGWG------------TQTCNGKS---------MPFWLIANSWSTGWGEKG 325
H+V ++G+G QT N K + +W+I NSWS WGE G
Sbjct: 486 --LNHSVLLVGYGQVEKTKLNYNNKIQTYNTKENSNQPDDNIIYYWIIKNSWSKKWGENG 543
Query: 326 LVKIRSGVN 334
+++ N
Sbjct: 544 FMRLSRNKN 552
>M.Javanica_Scaff13493g067478 on XP_001347833 Falcipain 3 (Cysteine protease) [Plasmodium
falciparum]
Length = 482
Score = 75.9 bits (185), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 43/224 (19%)
Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDGCQGG 174
++DQ CGSCWA S+ + +Y I + K S +++ CS GC GG
Sbjct: 274 VKDQKNCGSCWAFSSIGSVESQYAIRKNKL---------ITLSEQELVDCSFKNYGCNGG 324
Query: 175 WPLDAWK-WIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYPKDKH 233
+A++ I+ G+CT D YPY S P CT +
Sbjct: 325 LINNAFEDMIELGGICTDDD---------YPYVSDA--PNLCNIDRCTEKY--------- 364
Query: 234 FATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANARKVGGHAV 293
G K + +K + GP+ V +DF Y+ G++ HAV
Sbjct: 365 ---GIKNYL--SVPDNKLKEALRFLGPISISIAVSDDFPFYKEGIF--DGECGDELNHAV 417
Query: 294 RIIGWGTQ------TCNGKSMPFWLIANSWSTGWGEKGLVKIRS 331
++G+G + T G+ +++I NSW WGE+G + I +
Sbjct: 418 MLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIET 461
>M.Javanica_Scaff13493g067478 on AAX77225 Falcipain 2' (Cysteine protease) [Plasmodium
falciparum]
Length = 484
Score = 75.9 bits (185), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 43/224 (19%)
Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDGCQGG 174
++DQ CGSCWA S+ + +Y I + K S +++ CS GC GG
Sbjct: 276 VKDQKNCGSCWAFSSIGSVESQYAIRKNKL---------ITLSEQELVDCSFKNYGCNGG 326
Query: 175 WPLDAWK-WIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYPKDKH 233
+A++ I+ G+CT D YPY S P CT +
Sbjct: 327 LINNAFEDMIELGGICTDDD---------YPYVSDA--PNLCNIDRCTEKY--------- 366
Query: 234 FATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANARKVGGHAV 293
G K + +K + GP+ V +DF Y+ G++ HAV
Sbjct: 367 ---GIKNYL--SVPDNKLKEALRFLGPISISVAVSDDFAFYKEGIF--DGECGDQLNHAV 419
Query: 294 RIIGWGTQ------TCNGKSMPFWLIANSWSTGWGEKGLVKIRS 331
++G+G + T G+ +++I NSW WGE+G + I +
Sbjct: 420 MLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIET 463
>M.Javanica_Scaff13493g067478 on ABC02174 Falstatin (Others) [Plasmodium falciparum]
Length = 492
Score = 75.9 bits (185), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 93/231 (40%), Gaps = 51/231 (22%)
Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDGCQGG 174
++DQ CGSCWA S+ + +Y I + A FS +++ CS+ +GC GG
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIRKK---------ALFLFSEQELVDCSVKNNGCYGG 334
Query: 175 WPLDAW-KWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRS----PCKSACTANWKTPYP 229
+ +A+ I G+C+ D YPY S P + C T P
Sbjct: 335 YITNAFDDMIDLGGLCSQDD---------YPYVSN--LPETCNLKRCNERYTIKSYVSIP 383
Query: 230 KDKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANARKVG 289
DK F + L GP+ +DF YR G Y A
Sbjct: 384 DDK-FKEALRYL-----------------GPISISIAASDDFAFYRGGFYDGECGA--AP 423
Query: 290 GHAVRIIGWGTQ------TCNGKSMPFWLIANSWSTGWGEKGLVKIRSGVN 334
HAV ++G+G + T + +++I NSW + WGE G + + + N
Sbjct: 424 NHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDEN 474
>M.Javanica_Scaff13493g067478 on XP_001347836 Falcipain 2 (Cysteine protease) [Plasmodium
falciparum]
Length = 492
Score = 75.9 bits (185), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 93/231 (40%), Gaps = 51/231 (22%)
Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDGCQGG 174
++DQ CGSCWA S+ + +Y I + A FS +++ CS+ +GC GG
Sbjct: 284 VKDQALCGSCWAFSSVGSVESQYAIRKK---------ALFLFSEQELVDCSVKNNGCYGG 334
Query: 175 WPLDAW-KWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRS----PCKSACTANWKTPYP 229
+ +A+ I G+C+ D YPY S P + C T P
Sbjct: 335 YITNAFDDMIDLGGLCSQDD---------YPYVSN--LPETCNLKRCNERYTIKSYVSIP 383
Query: 230 KDKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANARKVG 289
DK F + L GP+ +DF YR G Y A
Sbjct: 384 DDK-FKEALRYL-----------------GPISISIAASDDFAFYRGGFYDGECGA--AP 423
Query: 290 GHAVRIIGWGTQ------TCNGKSMPFWLIANSWSTGWGEKGLVKIRSGVN 334
HAV ++G+G + T + +++I NSW + WGE G + + + N
Sbjct: 424 NHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDEN 474
>M.Javanica_Scaff13493g067478 on XP_650937 CP5 (Cysteine protease) [Entamoeba histolytica]
Length = 318
Score = 69.3 bits (168), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 35/236 (14%)
Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMS--RDGCQ 172
I+DQ CGSC++ ++ + R +A +KK D Q ++ CS+S GC
Sbjct: 110 IRDQASCGSCYSFASVAAIEGRLLVAGSKKFTVDDLDLSEQ----QLVDCSVSVGNKGCN 165
Query: 173 GGWPLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYPKDK 232
GG L ++++++ G+ D YPY + T CT + K K
Sbjct: 166 GGSLLLSFRYVKLNGIMQEKD---------YPYVAAEET--------CTYDKKKVAVK-- 206
Query: 233 HFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYNDFMSYRSGVYFKTANARKVGGHA 292
TG K ++ + + V F Y+SG+Y + H
Sbjct: 207 --ITGQKLVRPGSEKALMRAAAEGPVAAAIDASGV--KFQLYKSGIYNSKECSSTQLNHG 262
Query: 293 VRIIGWGTQTCNGKSMPFWLIANSWSTGWGEKGLVKI-RSGVNEVGIEKSGIAFGI 347
V ++G+GTQ NG +W++ NSW T WG++G V + R+ N+ GI SG A+ +
Sbjct: 263 VAVVGYGTQ--NG--TEYWIVRNSWGTIWGDQGYVLMSRNKNNQCGI-ASGAAYPV 313
>M.Javanica_Scaff13493g067478 on AAS38514 CP65 (Cysteine protease) [Trichomonas vaginalis]
Length = 206
Score = 62.4 bits (150), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 83/208 (39%), Gaps = 34/208 (16%)
Query: 111 IIGHIQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDG 170
++ IQDQGQCGSCWA S +Y I + + S +++ C + DG
Sbjct: 32 VVNPIQDQGQCGSCWAFSAIQAQESQYAITSGEL---------QKLSEQNLVDCVTTCDG 82
Query: 171 CQGGWPLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYPK 230
C+GG +A+ ++ IK + G + P + C +
Sbjct: 83 CEGGLMTNAYDYV----------IKYQDG----KFMLENDYPYTAYYYDCLFDTDKAVSN 128
Query: 231 DKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDV-YNDFMSYRSGVYFKTANARKVG 289
+ +G + + AT +I TNGP D + F Y G+Y + +
Sbjct: 129 IVSYINVVEGDENDLAT------KISTNGPAAVAIDASHYSFQLYSQGIYNVPSRSSYGL 182
Query: 290 GHAVRIIGWGTQTCNGKSMPFWLIANSW 317
H V +G+G + S +W++ NSW
Sbjct: 183 DHGVGCVGYGAE----GSTKYWIVKNSW 206
>M.Javanica_Scaff13493g067478 on XP_650642 CP2 (Cysteine protease) [Entamoeba histolytica]
Length = 315
Score = 55.1 bits (131), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 46/232 (19%)
Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGS-QFSALDVLSCSMSRDGCQG 173
I+DQ QCGSC+ + + R I + G DA + S ++ C+ RD
Sbjct: 109 IRDQAQCGSCYTFGSLAALEGRLLIEK-------GGDANTLDLSEEHMVQCT--RDNGNN 159
Query: 174 GWPLD----AWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYP 229
G + +I GV +D YPY+ +T ++ KS T P
Sbjct: 160 GCNGGLGSNVYDYIIEHGVAKESD---------YPYTGSDSTCKTNVKSFAKITGYTKVP 210
Query: 230 KDKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYN-DFMSYRSGVYFKTA--NAR 286
++ N A ++A ++ G V D + F Y+SG Y T N
Sbjct: 211 RN------------NEAELKAA----LSQGLVDVSIDASSAKFQLYKSGAYTDTKCKNNY 254
Query: 287 KVGGHAVRIIGWGTQTCNGKSMPFWLIANSWSTGWGEKGLVKIRSGVNEVGI 338
H V +G+G +GK W++ NSW TGWG+KG + + N G+
Sbjct: 255 FALNHEVCAVGYGV--VDGKEC--WIVRNSWGTGWGDKGYINMVIEGNTCGV 302
>M.Javanica_Scaff13493g067478 on XP_650156 CP1 (Cysteine protease) [Entamoeba histolytica]
Length = 315
Score = 54.3 bits (129), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 40/220 (18%)
Query: 115 IQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMS--RDGCQ 172
I+DQG CGSC+ + + R I +K G S ++ C+ +GC
Sbjct: 109 IRDQGNCGSCYTFGSIAALEGRLLI------EKGGDSETLDLSEEHMVQCTREDGNNGCN 162
Query: 173 GGWPLDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYPKDK 232
GG + + +I G+ +D YPY+ +T RS K+ + K K
Sbjct: 163 GGLGSNVYNYIMENGIAKESD---------YPYTGSDSTCRSDVKA---------FAKIK 204
Query: 233 HFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYN-DFMSYRSGVYF--KTANARKVG 289
+ A+ N ++A ++ G V D + F Y+SG Y + N
Sbjct: 205 SYNRVARN---NEVELKAA----ISQGLVDVSIDASSVQFQLYKSGAYTDKQCKNNYFAL 257
Query: 290 GHAVRIIGWGTQTCNGKSMPFWLIANSWSTGWGEKGLVKI 329
H V +G+G +GK W++ NSW TGWGEKG + +
Sbjct: 258 NHEVCAVGYGV--VDGKEC--WIVRNSWGTGWGEKGYINM 293
>M.Javanica_Scaff13493g067478 on CAA54436 CP2 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 53.1 bits (126), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 98/256 (38%), Gaps = 64/256 (25%)
Query: 33 QKIVDDINGLAKGVWTAEVNTITRLPLIEQKKLCGT-IIPEENRNHTQAEPPKVEGTVKG 91
+++V + N KG + +N + L E + L G + +++ N + + P +
Sbjct: 48 KRLVQEHNAANKG-FKLGLNKLAHLTQSEYRSLLGAKRLGQKSGNFFKCDAPANDAV--- 103
Query: 92 SCSTKIEFDARTKWSGCSAIIGHIQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTD 151
D R K I+ I+DQGQCGSCWA S RY A K D
Sbjct: 104 --------DWRDK-----GIVNKIKDQGQCGSCWAFSAIQASESRYAQA-----NKQLLD 145
Query: 152 AGSQFSALDVLSCSMSRDGCQGGWPLDAWKWIQSKGVCTGTDIKTKGG----CKPYPYSS 207
Q +++ C S GC GGWP A ++ +K + G YPY++
Sbjct: 146 LAEQ----NIVDCVTSCYGCNGGWPSKAIDYV----------VKHQAGKFMLTADYPYTA 191
Query: 208 GGATPRSPCKSACTANWKTPYPKDKHFATGAKGLQGNTATVQAIKNEI---MTNGPVVAC 264
T C K A+ + GL V+ + E+ + G V C
Sbjct: 192 RDGT----C---------------KFHASKSVGLTKGYDEVKDTEAELAKAASKGVVSVC 232
Query: 265 FDV-YNDFMSYRSGVY 279
D + F Y SG+Y
Sbjct: 233 IDASHYSFQLYTSGIY 248
>M.Javanica_Scaff13493g067478 on CAA54438 CP1 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 51.6 bits (122), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 106/273 (38%), Gaps = 53/273 (19%)
Query: 33 QKIVDDINGLAKGVWTAEVNTITRLPLIEQKKLCGTIIPEENRNHTQAEPPKVEGTVKGS 92
+++V + N G +T +N + L E L G + + R VK +
Sbjct: 25 KRLVQEHNRANLG-FTVALNKLAHLTPAEYNSLLGFRMNKAERK-----------AVKSN 72
Query: 93 CSTKIEFDARTKWSGCSAIIGHIQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDA 152
+ D R K + I+DQGQCGSCWA S +Y I+ KT
Sbjct: 73 AIANADCDWRKK-----GAVNPIKDQGQCGSCWAFSAIQAQESQYYISF-----KTLQSL 122
Query: 153 GSQFSALDVLSCSMSRDGCQGGWPLDAWKWI---QSKGVCTGTDIKTKGGCKPYPYSSGG 209
Q +++ C + GC GG A+ ++ QS T D YPY
Sbjct: 123 SEQ----NLVDCVTTCYGCNGGLMDAAYDYVVKHQSGKFMTEAD---------YPY---- 165
Query: 210 ATPRSPCKSACTANWKTPYPKDKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYN 269
T R +C N + K + A+G + + AT ++ T GP D
Sbjct: 166 -TARD---GSCKFNAAKGTSQIKSYVNVAEGDEKDLAT------KVSTLGPAAIAIDASA 215
Query: 270 -DFMSYRSGVYFKTANARKVGGHAVRIIGWGTQ 301
F Y SG+Y ++A + H V +G+GT+
Sbjct: 216 WSFQLYSSGIYDESACSSYNLDHGVGCVGYGTE 248
>M.Javanica_Scaff13493g067478 on AAV98582 CP4 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 45.4 bits (106), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 97/255 (38%), Gaps = 53/255 (20%)
Query: 33 QKIVDDINGLAKGVWTAEVNTITRLPLIEQKKLCGTIIPEENRNHTQAEPPKVEGTVKGS 92
+++V + N G +T +N + L E L G + + R VK +
Sbjct: 38 KRLVQEHNRANLG-FTVALNKLAHLTPAEYNSLLGFRMNKAERK-----------AVKSN 85
Query: 93 CSTKIEFDARTKWSGCSAIIGHIQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDA 152
+ D R K + I+DQGQCGSCWA S +Y I+ KT
Sbjct: 86 AIANADCDWRKK-----GAVNPIKDQGQCGSCWAFSAIQAQESQYYISF-----KTLQSL 135
Query: 153 GSQFSALDVLSCSMSRDGCQGGWPLDAWKWI---QSKGVCTGTDIKTKGGCKPYPYSSGG 209
Q +++ C + GC GG A+ ++ QS T D YPY++
Sbjct: 136 SEQ----NLVDCVTTCYGCNGGLMDAAYDYVVKHQSGKFMTEAD---------YPYTARD 182
Query: 210 ATPRSPCKSACTANWKTPYPKDKHFATGAKGLQGNTATVQAIKNEIMTNGPVVACFDVYN 269
+ C N + K + A+G + + AT ++ T GP D
Sbjct: 183 GS--------CKFNAAKGTSQIKSYVNVAEGDEKDLAT------KVSTLGPAAIAIDASA 228
Query: 270 -DFMSYRSGVYFKTA 283
F Y SG+Y ++A
Sbjct: 229 WSFQLYSSGIYDESA 243
>M.Javanica_Scaff13493g067478 on CAA38278 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 38.9 bits (89), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 307 SMPFWLIANSWSTGWGEKGLVKIRSGVNE 335
++P+W+I NSW+ WGE G ++I G N+
Sbjct: 2 AVPYWIIKNSWTAQWGEDGYIRIAKGSNQ 30
>M.Javanica_Scaff13493g067478 on EAN83733 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 38.5 bits (88), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 307 SMPFWLIANSWSTGWGEKGLVKIRSGVNE 335
++P W+I NSW+T WGE G ++I G N+
Sbjct: 10 TVPHWIIKNSWTTQWGEDGYIRIAKGSNQ 38
>M.Javanica_Scaff13493g067478 on BAA96736 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 35.0 bits (79), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 119 GQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDGCQGGWPLD 178
GQCGSCWA S ++ +A + S ++SC + GC GG +
Sbjct: 1 GQCGSCWAFSAIGNVEGQWFLA---------GHPLTNLSEQMLVSCDKTDSGCSGGLMNN 51
Query: 179 AWKWI 183
A++WI
Sbjct: 52 AFEWI 56
>M.Javanica_Scaff13493g067478 on CAA54437 CP3 (Cysteine protease) [Trichomonas vaginalis]
Length = 255
Score = 37.4 bits (85), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 111 IIGHIQDQGQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDG 170
I+ I+DQ QCGSCWA S ++ + KKGQ + +++ C + G
Sbjct: 111 IVNPIKDQAQCGSCWAFSVVQVQESQWAL---KKGQLLS------LAEQNMVDCVDTCYG 161
Query: 171 CQGGWPLDAWKWI 183
C GG A+ ++
Sbjct: 162 CDGGDEYLAYDYV 174
>M.Javanica_Scaff13493g067478 on BAA96737 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 33.5 bits (75), Expect = 0.002, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 119 GQCGSCWAVSTASTYTDRYCIARAKKGQKTGTDAGSQFSALDVLSCSMSRDGCQGGWPLD 178
GQCGSCWA S ++ +A + S ++SC + GC GG +
Sbjct: 1 GQCGSCWAFSAIGNVECQWFLA---------GHPLTNLSEQMLVSCDKTDSGCGGGLMNN 51
Query: 179 AWKWI 183
A++WI
Sbjct: 52 AFEWI 56
>M.Javanica_Scaff13493g067478 on CAJ20707 Toxopain-2 (Protease) [Toxoplasma gondii]
Length = 255
Score = 29.6 bits (65), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 115 IQDQGQCGSCWAVSTASTYTDRYC 138
++DQ CGSCWA ST +C
Sbjct: 220 VKDQRDCGSCWAFSTTGALEGAHC 243
>M.Javanica_Scaff13493g067478 on EAN82385 Cruzipain (Cysteine protease) [Trypanosoma cruzi]
Length = 70
Score = 27.3 bits (59), Expect = 0.32, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 10/50 (20%)
Query: 161 VLSCSMSRDGCQGGWPLDAWKWI--QSKGVCTGTDIKTKGGCKPYPYSSG 208
++SC + GC GG +A++WI ++ G D YPY+SG
Sbjct: 25 LVSCDKTDSGCGGGLMNNAFEWIVQENNGAVYTED--------SYPYASG 66
>M.Javanica_Scaff13493g067478 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 25.4 bits (54), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 25/63 (39%)
Query: 177 LDAWKWIQSKGVCTGTDIKTKGGCKPYPYSSGGATPRSPCKSACTANWKTPYPKDKHFAT 236
L W I+ C G++ + G K ATP +PCK W+ P+ +
Sbjct: 130 LVGWSRIEKCWDCKGSNNNNQHGIKTDCGYLKDATPNTPCKECECMKWEVKNPESEGTPL 189
Query: 237 GAK 239
G K
Sbjct: 190 GRK 192
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16059g073757
(92 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.6
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.8
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.9
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 4.0
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 4.0
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.5
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.8
>M.Javanica_Scaff16059g073757 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 23.1 bits (48), Expect = 3.6, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 4 LNENNSNNNTRLDLLLNARLDENESFMEAFNYLNENLNVGNANVTEQALRMAVEDRELAL 63
+NE N N T + +N L ++S+++ F NL + N E L+ ++D E +L
Sbjct: 1106 INEINKNYQTLYEKKINVLLHNSKSYVQYFYDHIINLILQKKNYLENTLKTKIQDNEHSL 1165
>M.Javanica_Scaff16059g073757 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 23.1 bits (48), Expect = 3.8, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 4 LNENNSNNNTRLDLLLNARLDENESFMEAFNYLNENLNVGNANVTEQALRMAVEDRELAL 63
+NE N N T + +N L ++S+++ F NL + N E L+ ++D E +L
Sbjct: 1119 INEINKNYQTLYEKKINVLLHNSKSYVQYFYDHIINLILQKKNYLENTLKTKIQDNEHSL 1178
>M.Javanica_Scaff16059g073757 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 23.1 bits (48), Expect = 3.9, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 4 LNENNSNNNTRLDLLLNARLDENESFMEAFNYLNENLNVGNANVTEQALRMAVEDRELAL 63
+NE N N T + +N L ++S+++ F NL + N E L+ ++D E +L
Sbjct: 1110 INEINKNYQTLYEKKINVLLHNSKSYVQYFYDHIINLILQKKNYLENTLKTKIQDNEHSL 1169
>M.Javanica_Scaff16059g073757 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 23.1 bits (48), Expect = 4.0, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 4 LNENNSNNNTRLDLLLNARLDENESFMEAFNYLNENLNVGNANVTEQALRMAVEDRELAL 63
+NE N N T + +N L ++S+++ F NL + N E L+ ++D E +L
Sbjct: 1112 INEINKNYQTLYEKKINVLLHNSKSYVQYFYDHIINLILQKKNYLENTLKTKIQDNEHSL 1171
>M.Javanica_Scaff16059g073757 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 23.1 bits (48), Expect = 4.0, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 4 LNENNSNNNTRLDLLLNARLDENESFMEAFNYLNENLNVGNANVTEQALRMAVEDRELAL 63
+NE N N T + +N L ++S+++ F NL + N E L+ ++D E +L
Sbjct: 1114 INEINKNYQTLYEKKINVLLHNSKSYVQYFYDHIINLILQKKNYLENTLKTKIQDNEHSL 1173
>M.Javanica_Scaff16059g073757 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 22.3 bits (46), Expect = 7.5, Method: Composition-based stats.
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 27 ESFMEAFNYLNENLN 41
ESF++ +N L ENLN
Sbjct: 572 ESFLKDYNKLKENLN 586
>M.Javanica_Scaff16059g073757 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 21.9 bits (45), Expect = 9.8, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 37 NENLNVGNANVTEQALRMAVEDRELALNQQY 67
N N + NV E+ ++ DR L ++Y
Sbjct: 1961 NTNTTMSRHNVEEKPFITSIHDRNLYTGEEY 1991
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1335g014852
(121 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815807 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.3
BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 23 8.1
>M.Javanica_Scaff1335g014852 on XP_815807 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 899
Score = 23.5 bits (49), Expect = 5.3, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 1 MNSSKNSESSNNDLTCLPTSSSTYMPNSRVCSVCSGPS 38
M SSK+++S +PT +++ V V SG S
Sbjct: 777 MESSKDADSGGASTAAVPTITTSSAGKDTVKRVASGTS 814
>M.Javanica_Scaff1335g014852 on BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 1566
Score = 22.7 bits (47), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 13/71 (18%)
Query: 37 PSNGFYFGVLSCRACASFYRRSFFE------KRRFLCR-------RFNNCDINADGMRNS 83
P N F L+C C + FFE + + +C+ +F N DI + +
Sbjct: 364 PDNALDFLKLNCSECKDIDFKPFFEFEYGKYEEKCMCQSYIDLKIQFKNIDICSFNAQTD 423
Query: 84 CRACRLRRCLE 94
+ R CLE
Sbjct: 424 TVSSDKRFCLE 434
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14220g069335
(62 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15736g073041
(116 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348165 RESA (Others) [plasmodium falciparum] 29 0.052
XP_829794 VSG (Establishment) [Trypanosoma brucei] 23 8.4
>M.Javanica_Scaff15736g073041 on XP_001348165 RESA (Others) [plasmodium falciparum]
Length = 1085
Score = 29.3 bits (64), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 18 ESTPT-------HYETLNVPFNASTEKIKANYRELMMKYHPDKNKNNPKAKEIAQKLNEA 70
E+ PT +Y+ L V NA +I Y +L Y+P ++ +K+NEA
Sbjct: 512 EAAPTIEIPDTLYYDILGVGVNADMNEITERYFKLAENYYP-YQRSGSTVFHNFRKVNEA 570
Query: 71 HRILTDEQERTKYDK 85
+++L D ++ Y+K
Sbjct: 571 YQVLGDIDKKRWYNK 585
>M.Javanica_Scaff15736g073041 on XP_829794 VSG (Establishment) [Trypanosoma brucei]
Length = 476
Score = 22.7 bits (47), Expect = 8.4, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 43 RELMMKYHPDKNKNNPKAK 61
R L++ YH + KN P K
Sbjct: 383 RGLVLAYHASQRKNKPSCK 401
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1609g017021
(1086 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816532 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 1.0
XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 1.2
XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 1.4
XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 1.6
XP_804817 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 1.7
XP_810005 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 2.1
XP_813188 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 3.1
XP_811916 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 4.0
XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 5.0
XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.4
XP_812546 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 7.6
XP_821769 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 7.6
XP_811242 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 7.7
XP_808062 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 8.4
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 27 9.0
XP_814225 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 9.7
>M.Javanica_Scaff1609g017021 on XP_816532 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 725
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 30/156 (19%)
Query: 614 VEDNTLGMNLREKSNSEEQTLQKIYSTNKGKMFLFSLNNSKIGNKYQFIPKSNKLLFMPR 673
+ED TL + K +E IYSTN G + S S +Y + + L M
Sbjct: 274 MEDGTLVFPVMAKDEAENVCSMIIYSTNNGSTWALSEGMSPAKCRYPRMTEWEGSLLM-- 331
Query: 674 LVDFEFNG----ECEGVVASFNSQIG----------KFIKG---KVEPLVENA------- 709
+VD E NG E + A++ IG FI+ +VE L+
Sbjct: 332 IVDCE-NGQRVYESRDMGATWTEAIGTLPGVWVKSRSFIQDLSLRVEALITATIEGGKVM 390
Query: 710 -FVKAIHKTDES--DVFTTNTDNKGLFSIGPVWKEE 742
+++ + + ES ++ TDN F GPV EE
Sbjct: 391 LYIQGGYASGESANPLYLWVTDNNRSFYFGPVAVEE 426
>M.Javanica_Scaff1609g017021 on XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 614 VEDNTLGMNLREKSNSEEQTLQKIYSTNKGKMFLFSLNNSKIGNKYQFIPKSNKLLFMPR 673
+ED TL L KS + + IYS GK +L S S G ++ I + L M
Sbjct: 274 MEDGTLVFPLMAKSGNGDYYSMTIYSKEDGKKWLLSTGVSPAGCRFPRITEWEGSLLM-- 331
Query: 674 LVDFE 678
+VD E
Sbjct: 332 IVDCE 336
>M.Javanica_Scaff1609g017021 on XP_805196 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 731
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 614 VEDNTLGMNLREKSNSEEQTLQKIYSTNKGKMFLFSLNNSKIGNKYQFIPKSNKLLFMPR 673
+ED TL +L S IYSTN G + S S +Y I + + M
Sbjct: 253 MEDGTLVFSLMAGDKSGNICSMIIYSTNNGSTWTLSEGMSPADCRYPHITEWEGSILM-- 310
Query: 674 LVDFEFNG----ECEGVVASFNSQIGKFI 698
+VD E NG E + S+ IGK +
Sbjct: 311 IVDCE-NGQRVYESRDMGGSWTEAIGKLL 338
>M.Javanica_Scaff1609g017021 on XP_805195 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 614 VEDNTLGMNLREKSNSEEQTLQKIYSTNKGKMFLFSLNNSKIGNKYQFIPKSNKLLFMPR 673
+ED TL +L S IYSTN G + S S +Y I + + M
Sbjct: 291 MEDGTLVFSLMAGDKSGNICSMIIYSTNNGSTWTLSEGMSPADCRYPHITEWEGSILM-- 348
Query: 674 LVDFEFNG----ECEGVVASFNSQIGKFI 698
+VD E NG E + S+ IGK +
Sbjct: 349 IVDCE-NGQRVYESRDMGGSWTEAIGKLL 376
>M.Javanica_Scaff1609g017021 on XP_804817 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 614 VEDNTLGMNLREKSNSEEQTLQKIYSTNKGKMFLFSLNNSKIGNKYQFIPKSNKLLFMPR 673
+ED+TL +L S IYSTN G + S S G +Y I + L M
Sbjct: 291 MEDDTLVFSLMAGDKSGNIYSMIIYSTNNGSTWALSKGVSPAGCRYPRITEWEGSLLM-- 348
Query: 674 LVDFEFNGE 682
+VD E NG+
Sbjct: 349 IVDCE-NGQ 356
>M.Javanica_Scaff1609g017021 on XP_810005 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 35/162 (21%)
Query: 614 VEDNTLGMNLREKSNSEEQTLQKI-YSTNKGKMFLFSLNNSKIGNKYQFIPKSNKLLFMP 672
+E+ TL +L KS + I YSTN G + S S G +Y I + L M
Sbjct: 275 MENGTLVFSLMAKSEENDGVYSMIIYSTNNGSTWSLSEGVSSAGCRYPRITEWEGSLLM- 333
Query: 673 RLVDF-----------------EFNGECEGVVASFNSQIGKFIKGKVEPLV--------- 706
+VD E G GV + S++ + + +V+ L+
Sbjct: 334 -IVDCNDEQKVYESRDMGTTWTEAIGTLPGVWVNSRSRVSQDVSLRVDALITATIEGRKV 392
Query: 707 ----ENAFVKAIHKTDESDVFTTNTDNKGLFSIGPVWKEEDF 744
+ + +K + ++ TDN FS+GPV E++
Sbjct: 393 MLYTQRGYFSGGNKA--TALYLWVTDNNRTFSVGPVAVEDNM 432
>M.Javanica_Scaff1609g017021 on XP_813188 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1002
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 516 DLDFIQKAYFLEIKSSKSALLKYWPDKTENPKIEEFQLKEGENKIYFKEENKYYFSIES 574
D D +K + IKS+ W D + NPK + L G I +EE++Y I++
Sbjct: 171 DDDEEKKEFNWGIKSTSGVPYDIWGDYSTNPKRFKQFLGGGGAGIRMEEESRYVLPIQA 229
>M.Javanica_Scaff1609g017021 on XP_811916 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 685
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 614 VEDNTLGMNLREKSNSEEQTLQKIYSTNKGKMFLFSLNNSKIGNKYQFIPKSNKLLFMPR 673
+ED TL L KS +E+ IYST+ G+ ++ S S I + L M
Sbjct: 239 MEDGTLVFPLTAKSEAEDVCSMIIYSTDNGEKWMLSNGTSPERCGAPRITEWEGSLLM-- 296
Query: 674 LVDFEFNG----ECEGVVASFNSQIGKF--IKGKVEPLV 706
+VD E NG E + ++ IG + K++P V
Sbjct: 297 IVDCE-NGQRVYESRDMGTTWTEAIGTLPGVWAKLQPEV 334
>M.Javanica_Scaff1609g017021 on XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1058
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 727 TDNKGLFSIGPVWKEEDFSIEII---------KEGFIFV---KMADYPHTFTSIKLTQLR 774
TD+ ++ +GPV +EED + KE I + K +D + +++LT+ +
Sbjct: 402 TDSARVYDVGPVSREEDDAAASSLLMKNERDNKEELISLYENKKSDGSYNLVALRLTE-K 460
Query: 775 IQFLEE--KTNKPLSDILVSISGGSN 798
++ ++E KT K L +L + S GS+
Sbjct: 461 LERIKEVVKTWKDLDSVLRTCSSGSS 486
>M.Javanica_Scaff1609g017021 on XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 867
Score = 27.3 bits (59), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Query: 727 TDNKGLFSIGPVWKEED----FSIEIIKEGFIFV----KMADYPHTFTSIKLTQ 772
TDN ++ +GP+ +E D S+ + EG + + + D P++ +++LT+
Sbjct: 398 TDNARVYDVGPISRENDDAAASSLLVKSEGELILLYEKRNGDGPYSLVAMRLTE 451
>M.Javanica_Scaff1609g017021 on XP_812546 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 603 SSSVSAFVQTDVEDNTLGMNLREKSNSEEQTLQKIYSTNKGKMFLFSLNNSKIGNKYQFI 662
SS VS V +ED TL + KS E+ IYST+ G ++ S + S I
Sbjct: 268 SSGVSGVV---MEDGTLVFPMMAKSEEEDVYSMIIYSTDNGSIWALSEDMSPAECLNPRI 324
Query: 663 PKSNKLLFMPRLVDFEFNG----ECEGVVASFNSQIGKF 697
+ L M +VD E NG E + ++ IGK
Sbjct: 325 TEWEGSLLM--IVDCE-NGQRVYESRDMGTAWTEAIGKL 360
>M.Javanica_Scaff1609g017021 on XP_821769 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 603 SSSVSAFVQTDVEDNTLGMNLREKSNSEEQTLQKIYSTNKGKMFLFSLNNSKIGNKYQFI 662
SS VS V +ED TL + KS E+ IYST+ G ++ S + S I
Sbjct: 268 SSGVSGVV---MEDGTLVFPMMAKSEEEDVYSMIIYSTDNGSIWALSEDMSPAECLNPRI 324
Query: 663 PKSNKLLFMPRLVDFEFNG----ECEGVVASFNSQIGKF 697
+ L M +VD E NG E + ++ IGK
Sbjct: 325 TEWEGSLLM--IVDCE-NGQRVYESRDMGTAWTEAIGKL 360
>M.Javanica_Scaff1609g017021 on XP_811242 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 909
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 727 TDNKGLFSIGPVWKEED----FSIEIIKEGFIFV----KMADYPHTFTSIKLTQLRIQFL 778
TDN ++ +GP+ +E D S+ + EG + + + D P++ +++L + +++++
Sbjct: 440 TDNARVYDVGPISREGDDAAASSLLVKSEGELILLYEKRNGDVPYSLVAMRLNE-QLEWI 498
Query: 779 EE--KTNKPLSDIL-VSISGGSNFRSNNITNETGLLKFIGL 816
+ KT K L + L V+ G F S+ + +++G+
Sbjct: 499 KSAVKTWKELDNALGVTTEGLVGFLSSTLDGTAWKDEYLGV 539
>M.Javanica_Scaff1609g017021 on XP_808062 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 26.9 bits (58), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 25/139 (17%)
Query: 727 TDNKGLFSIGPVWKEEDFSIE---IIK---EGFIFV---KMADYPHTFTSIKLTQLRIQF 777
TDN ++ +GPV +E D + ++K E I + K +D ++ +++LT+ +++
Sbjct: 394 TDNARVYDVGPVSRENDDAAASSLLMKDNNEELISLYENKKSDGSYSLVAVRLTE-KLER 452
Query: 778 LEEKTN--KPLSDILVSISGGSNFRSNNITNETGLL-------KFIGLMPGSYFVRPILQ 828
++E N K L L S S GS+ + T + G+ + +G + G++
Sbjct: 453 VKEVVNTWKDLDSALQSCSSGSSVTVD--TRKKGMCNGPVPTERLVGFLSGNFSENTWRD 510
Query: 829 EYKFNSSSFSVQINEGEEK 847
EY S + + GE +
Sbjct: 511 EYL----SVNATVTNGERR 525
>M.Javanica_Scaff1609g017021 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 26.9 bits (58), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 12/72 (16%)
Query: 598 ILTAISSSVSAFVQTDVEDNTLGMNLRE------------KSNSEEQTLQKIYSTNKGKM 645
IL AI +S + + D+ LG L E KSN+E+ LQ+++ NK +
Sbjct: 1814 ILEAIKNSFADYGNIVKGDDMLGDGLSEIIQKILVKLNEKKSNAEKLALQQLWENNKKYV 1873
Query: 646 FLFSLNNSKIGN 657
+ L K GN
Sbjct: 1874 WYVMLCGYKQGN 1885
>M.Javanica_Scaff1609g017021 on XP_814225 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 717
Score = 26.6 bits (57), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 81/194 (41%), Gaps = 34/194 (17%)
Query: 614 VEDNTLGMNLREKSNSEEQTLQKIYSTNKGKMFLFSLNNSK---IG------NKYQFIPK 664
+E+ TL +L + E + IYST++GK ++F +G +K Q +
Sbjct: 267 MENGTLVFSLSGPNEKGESSNWIIYSTDEGKTWVFPAGTPPAHCVGISITEWDKGQILMV 326
Query: 665 SNKL--------LFMPRLVDFEFNGECEGVVASFNS--------QIGKFIKGKVEPLVEN 708
+ L L M R E G GV + S +G +E +
Sbjct: 327 AECLGGRKVYESLDMGRTWT-EAVGTLPGVWVNPRSGARWDIDLSVGSLTTATIEGVRVM 385
Query: 709 AFVKAIHKT---DESDVFTTNTDNKGLFSIGPVWKEEDFSIEIIKEGFIF----VKMADY 761
+ ++T E ++ TDN +F +GP++ E F I+ +++ ++ + +A +
Sbjct: 386 LYTHKRYRTLEKRERGLYLCVTDNSRIFCLGPIYVES-FFIQTLEKALLYSEDALHIARF 444
Query: 762 PHTFTSIKLTQLRI 775
+T TS ++ R+
Sbjct: 445 TYTGTSKAISLARL 458
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15965g073538
(374 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821378 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.4
AAO72427 SAG2 (Others) [Toxoplasma gondii] 25 5.1
>M.Javanica_Scaff15965g073538 on XP_821378 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 934
Score = 26.2 bits (56), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Query: 10 LSLTFCLQIHAAPPYGQLSVKRSQLAGSNGQPVQLVGMSLFWSSCGEGEGFYNRETVNSL 69
+L + I P G + + + L+G+S ++S G+ E ET L
Sbjct: 579 FTLVATVSIDGVPEEGDTHIPLMGVKMDDSGKSVLLGLS--YNSGGKWELSCGEETPKEL 636
Query: 70 KCSWNSNVVRVAMGVEYSGCQRPGYLDAPNVERGKVEAVVKAAIELDMYVI 120
+W + + + +G Q Y+D V G+ E A + + I
Sbjct: 637 SSTWEKDTTHQVVILLRNGTQGSAYVDGQRVGNGQFELKTAEANRISHFYI 687
>M.Javanica_Scaff15965g073538 on AAO72427 SAG2 (Others) [Toxoplasma gondii]
Length = 186
Score = 25.0 bits (53), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 35 AGSNGQPVQLVGMSLFWSSCGEGEGFYNRETVNSLK 70
A S+G V G L S GEG+ FY +E +S K
Sbjct: 47 APSSGSVVFQCGDKLTISPSGEGDVFYGKECTDSRK 82
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13745g068158
(169 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827741 VSG (Establishment) [Trypanosoma brucei] 28 0.29
XP_827769 VSG (Establishment) [Trypanosoma brucei] 27 0.43
XP_827749 VSG (Establishment) [Trypanosoma brucei] 25 2.1
XP_802609 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.1
>M.Javanica_Scaff13745g068158 on XP_827741 VSG (Establishment) [Trypanosoma brucei]
Length = 514
Score = 28.1 bits (61), Expect = 0.29, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 31 AQEPVELIDSKSEASNNDQKQNLEQQSKCGTKETDYTPCMP 71
AQ+P ++++ EA N + L + K G ++ D PC P
Sbjct: 395 AQKPKIGVNTRCEAHNKSKAACLGAKCKWGGQKDDDGPCSP 435
>M.Javanica_Scaff13745g068158 on XP_827769 VSG (Establishment) [Trypanosoma brucei]
Length = 533
Score = 27.3 bits (59), Expect = 0.43, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 38 IDSKSEASNNDQKQNLEQQSKCGTKETDYTPCMPRERADSIFSHCCSQYVPQGCHSLCQY 97
I+ + E N + + L + K G K+ D PC P E D + +G +
Sbjct: 390 INVRCETHNKSKTECLGAKCKWGGKKEDDGPCTPTE--DQVAEQPARSTETEGAPK--EG 445
Query: 98 ESDELTARNLDNRKCCQHLNLGDSK 122
+ AR+ D++ C++ GD +
Sbjct: 446 AAATGCARHGDDKTACENDKTGDKQ 470
>M.Javanica_Scaff13745g068158 on XP_827749 VSG (Establishment) [Trypanosoma brucei]
Length = 516
Score = 25.4 bits (54), Expect = 2.1, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 32 QEPVELIDSKSEASN--NDQKQNLEQQSKCGTKETDYTPCMPRERADSIFSHCCSQYVPQ 89
QE E + K N + K + E +K K+ DY P E+ D I C+ +
Sbjct: 408 QETDETCEKKGTEDNYKDGCKWDGEGDNKKCVKDLDYKPKQVEEKDDGIKEEKCAGKQQE 467
Query: 90 GCHSL-CQYESD 100
C S+ C+++ +
Sbjct: 468 DCKSMDCKWKGE 479
>M.Javanica_Scaff13745g068158 on XP_802609 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 699
Score = 25.4 bits (54), Expect = 2.1, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 44 ASNNDQKQNLEQQSKCGTKETDYTPCMPRERA 75
AS +D Q ++ GT+E D+T + R RA
Sbjct: 653 ASLSDGGQTVDTGDGGGTREDDHTKLLSRARA 684
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15798g073188
(188 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14079g068995
(139 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14715g070571
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.1
XP_804421 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.5
XP_804086 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.8
XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.1
>M.Javanica_Scaff14715g070571 on XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2181
Score = 24.3 bits (51), Expect = 2.1, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 39 ECRGGKIYEINDVQDIDECKAACF 62
EC+GGK YEI + +E F
Sbjct: 494 ECKGGKRYEIPNHAKFNEINVLSF 517
>M.Javanica_Scaff14715g070571 on XP_804421 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 864
Score = 22.3 bits (46), Expect = 7.5, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 3 SPLCSLTILVGLAACCISLPQIQYVNDKPYHLMQQTECRGG--KIYEIND 50
S + S T+ G++A S P + DK LM T C G ++YE D
Sbjct: 352 SDIASWTLSKGMSADGCSDPSVVEWKDK--KLMMMTACDDGRRRVYESAD 399
>M.Javanica_Scaff14715g070571 on XP_804086 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 742
Score = 22.3 bits (46), Expect = 7.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 24 IQYVNDKPYHLMQQTECRGGKIYEIN-----DVQDIDE 56
+++ +K YHL Q +C G +N D +D ++
Sbjct: 336 VEWEANKKYHLALQMDCDDGLFVYVNGKRICDTEDYED 373
>M.Javanica_Scaff14715g070571 on XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 22.3 bits (46), Expect = 9.1, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 13 GLAACCISLPQIQYVNDKPYHLMQQTECRGG--KIYEIND 50
G++A S P I +K LM T C G ++YE D
Sbjct: 309 GMSADGCSDPSIVEWGEKDKKLMMMTACDDGRRRVYESGD 348
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14895g071035
(56 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611365 variant erythrocyte surface antigen-1, alpha subun... 23 1.3
XP_803376 VSG (Establishment) [Trypanosoma brucei] 23 1.7
AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 22 3.6
AAM45253 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 22 3.8
AAM45255 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 22 3.8
AAL23761 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 22 3.8
AAM45258 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 22 3.9
AAM45250 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 22 3.9
>M.Javanica_Scaff14895g071035 on XP_001611365 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 22.7 bits (47), Expect = 1.3, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 30 KLEEKLNEVKNEIQSYEA 47
+L+E L +K+EI+ YE+
Sbjct: 803 QLKEVLKNIKDEIEQYES 820
>M.Javanica_Scaff14895g071035 on XP_803376 VSG (Establishment) [Trypanosoma brucei]
Length = 503
Score = 22.7 bits (47), Expect = 1.7, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 36 NEVKNEIQSYEASFVISV 53
N+ KNE + E++F+ISV
Sbjct: 442 NKEKNECKVKESAFIISV 459
>M.Javanica_Scaff14895g071035 on AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 1210
Score = 21.6 bits (44), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 14/50 (28%)
Query: 16 LCETIKIDFAD--------------YALKLEEKLNEVKNEIQSYEASFVI 51
LC I+ +AD Y K+EE LN+V + + E S I
Sbjct: 531 LCSIIQNSYADLADIIKGSDIIKDYYGKKMEENLNKVNKDKKRNEESLKI 580
>M.Javanica_Scaff14895g071035 on AAM45253 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 21.6 bits (44), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 27 YALKLEEKLNEVKNEIQSYEASFVI 51
Y K+EE LN+V + + E S I
Sbjct: 416 YGKKMEENLNKVNKDKKRNEESLKI 440
>M.Javanica_Scaff14895g071035 on AAM45255 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 21.6 bits (44), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 27 YALKLEEKLNEVKNEIQSYEASFVI 51
Y K+EE LN+V + + E S I
Sbjct: 416 YGKKMEENLNKVNKDKKRNEESLKI 440
>M.Javanica_Scaff14895g071035 on AAL23761 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 21.6 bits (44), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 27 YALKLEEKLNEVKNEIQSYEASFVI 51
Y K+EE LN+V + + E S I
Sbjct: 416 YGKKMEENLNKVNKDKKRNEESLKI 440
>M.Javanica_Scaff14895g071035 on AAM45258 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 21.6 bits (44), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 14/50 (28%)
Query: 16 LCETIKIDFAD--------------YALKLEEKLNEVKNEIQSYEASFVI 51
LC I+ +AD Y K+EE LN+V + + E S I
Sbjct: 391 LCSIIQNSYADLADIIKGSDIIKDYYGKKMEENLNKVNKDKKRNEESLKI 440
>M.Javanica_Scaff14895g071035 on AAM45250 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 21.6 bits (44), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 27 YALKLEEKLNEVKNEIQSYEASFVI 51
Y K+EE LN+V + + E S I
Sbjct: 416 YGKKMEENLNKVNKDKKRNEESLKI 440
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15903g073405
(318 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845138 VSG (Establishment) [Trypanosoma brucei] 30 0.21
XP_001610196 variant erythrocyte surface antigen-1, alpha subun... 28 1.0
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 27 1.8
XP_001611206 variant erythrocyte surface antigen-1, alpha subun... 27 2.7
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 26 3.6
XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum] 25 9.1
>M.Javanica_Scaff15903g073405 on XP_845138 VSG (Establishment) [Trypanosoma brucei]
Length = 485
Score = 29.6 bits (65), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 261 FKANQIITQDRNCSVCNVTHTSQWHRYS--KPGHY 293
+ ++Q+ Q NC ++ HT+ W S +PG Y
Sbjct: 156 YTSDQLAAQVANCKATDLGHTTGWQDKSAHRPGGY 190
>M.Javanica_Scaff15903g073405 on XP_001610196 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1330
Score = 27.7 bits (60), Expect = 1.0, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 47/151 (31%)
Query: 111 ANNEIVKKFLKSLGKQIRLNNNFIMNNNYYEIILEESLEIINENGLLKENIENYKNKLLS 170
NN I+ + + LG+ NN+F N +++ EI+
Sbjct: 762 GNNGILGEVVDKLGEATNGNNDFDQGKNKISAAIDKVREILG------------------ 803
Query: 171 SYWTEINLIGYKIELLEIQK---VEYSKELKGMIIE-IGNKISGTNEQ-----NKQHCFN 221
EIQK V S LKG + E + N + T +Q N C +
Sbjct: 804 ----------------EIQKELGVSDSTHLKGTLSEWVANTLHKTIDQIKDICNSPKCPS 847
Query: 222 CRNTQNKLWHKYIKEYYFCDACDSYKRYNNG 252
C++ NK + +Y CD C +++Y +G
Sbjct: 848 CKSHSNKCGRQPQSKY--CDKC--HQQYMDG 874
>M.Javanica_Scaff15903g073405 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 26.9 bits (58), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 37 EKREFIYLKNIQINERFVLIMNVKNKSRID 66
EK F+ LKNI+INE L +KN+ + D
Sbjct: 2037 EKEAFVLLKNIKINETIKLFKQIKNERQND 2066
>M.Javanica_Scaff15903g073405 on XP_001611206 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1285
Score = 26.6 bits (57), Expect = 2.7, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 175 EINLIGYKIELLEIQKVEYSKELKGMIIEIGNKI 208
E++ + K++ LE +K E KE+K +++ IGN +
Sbjct: 630 ELDGVMKKVKALEGEKTEGIKEVKDVLVTIGNVV 663
>M.Javanica_Scaff15903g073405 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 26.2 bits (56), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 134 IMNNNYYEIILEESLEIINENGLLKENI-ENYKNKLLSSYWTEINLIGYKIELLEIQKVE 192
I +N+ + ++ + I+ + L K + + YKN+LL +W E G +I + +
Sbjct: 1332 ISTHNHIPEVSQKVITILEKENLTKSEVKQKYKNELLDDWWNE---HGKEIWDGMVCALC 1388
Query: 193 YSKELKGMIIEIGNKISGTNEQNKQHCFNCRNTQNKLWHKYIKEYYF 239
Y + K E+ +++G N + + + + QN + K+ + F
Sbjct: 1389 YDTKTKEFKNEVRTQLTGPNSKYQYGTVSFGDKQNTILSKFAERPPF 1435
>M.Javanica_Scaff15903g073405 on XP_001350082 Rh2b (Adhesin) [Plasmodium falciparum]
Length = 1115
Score = 24.6 bits (52), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 32 KEDWEEKREFIYLKNIQINERFVLIMNVKNKSRIDDYIYKNAGSFC 77
+ED+ EK ++ ++ NER+ N +++DD++Y G C
Sbjct: 1020 EEDYTEKHDYDKHEDFN-NERY------SNHNKMDDFVYNAGGVVC 1058
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14557g070179
(147 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.84
XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.2
XP_803006 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.4
>M.Javanica_Scaff14557g070179 on XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2275
Score = 26.2 bits (56), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 27 DLSIPELQDNEFEDDESRGSESISYNIWSPGPKSPSVPLAI--SGEIESDLTSKIEV 81
D + L +F+D E++ + ++ P P + I SGE D+ +K++
Sbjct: 508 DCGVKPLGGGKFQDKETKRKKCEGEKLYEPKPNKEGTTITILKSGENHDDIETKLKA 564
>M.Javanica_Scaff14557g070179 on XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2241
Score = 23.9 bits (50), Expect = 5.2, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 36 NEFEDDESRGSESISYNIWSPGPKSPSVPLAI--SGEIESDLTSKIEVELAQYK 87
N++E+ ++ + ++ P P P+ I SGE E+++ +K+ AQ K
Sbjct: 501 NQWENKSK--NDQCNIKLYRPNPGESGTPIEILKSGEGETEIENKLNAFCAQTK 552
>M.Javanica_Scaff14557g070179 on XP_803006 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 582
Score = 23.5 bits (49), Expect = 7.4, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 8/39 (20%)
Query: 75 LTSKIE------VELAQY--KAEKRIDIDGDIFLWWRQN 105
+T+KIE V L Y KA+K +++ G + LW N
Sbjct: 178 ITAKIEDRDVMLVTLPVYANKADKEVNVKGRLHLWLTDN 216
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1541g016503
(65 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805215 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.1
XP_815822 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.2
XP_807474 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.5
>M.Javanica_Scaff1541g016503 on XP_805215 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 256
Score = 21.9 bits (45), Expect = 4.1, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 19 GKDLKKYYYERDPQDGKRVA 38
G + +KY+ RD +DG+ V+
Sbjct: 74 GSETEKYFDWRDTKDGEAVS 93
>M.Javanica_Scaff1541g016503 on XP_815822 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 21.9 bits (45), Expect = 4.2, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 19 GKDLKKYYYERDPQDGKRVA 38
G + +KY+ RD +DG+ V+
Sbjct: 130 GSETEKYFDWRDTKDGETVS 149
>M.Javanica_Scaff1541g016503 on XP_807474 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 266
Score = 21.6 bits (44), Expect = 5.5, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 19 GKDLKKYYYERDPQDGKRVA 38
G + +KY+ RD +DG+ V+
Sbjct: 74 GSETEKYFDWRDTKDGEAVS 93
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff136g002436
(262 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001611442 variant erythrocyte surface antigen-1, alpha subun... 25 3.9
>M.Javanica_Scaff136g002436 on XP_001611442 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1350
Score = 25.4 bits (54), Expect = 3.9, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 196 ERRRMNHLNKAFDRLRNVLPPNFEEGRRLSKFETLLGAQEYIIKLGEYLEELKKGK 251
E R + K LR V+P E + E LL + +++LG E L +G+
Sbjct: 677 EHDRKKRVGKVKGELRKVVPQGTSEELVKALKELLLKIGDVVVQLGNAQERLDRGE 732
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff141g002507
(65 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.001
XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.001
XP_809289 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.10
XP_954179 TashAT2 (Establishment) [Theileria annulata] 25 0.49
XP_815514 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.54
XP_807450 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.56
XP_812068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.57
XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.75
XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.0
XP_954175 TashAT3 (Establishment) [Theileria annulata] 23 1.1
XP_821714 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.1
XP_821683 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.2
XP_816823 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.2
XP_821294 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.2
XP_812620 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.4
XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.4
XP_811702 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.6
XP_822021 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.9
XP_954177 TashAT1 (Establishment) [Theileria annulata] 23 2.2
XP_802173 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.2
XP_807798 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.4
XP_817615 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.5
XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.8
CAE53332 SuAT1 (Establishment) [Theileria annulata] 22 3.5
XP_802283 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 6.0
XP_812950 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 7.4
>M.Javanica_Scaff141g002507 on XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 32.0 bits (71), Expect = 0.001, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 11 PQMSDPQKSHPQRSRPQKSHPQRSRPQK 38
P S P++ P SRP++ P SRP++
Sbjct: 755 PAASRPEEPEPAESRPEEPEPAESRPEE 782
Score = 27.3 bits (59), Expect = 0.056, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 13 MSDPQKSHPQRSRPQKSHPQRSRPQKS 39
+S+P S P+ P +S P+ P +S
Sbjct: 752 LSEPAASRPEEPEPAESRPEEPEPAES 778
Score = 26.9 bits (58), Expect = 0.065, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 11 PQMSDPQKSHPQRSRPQKSHPQRSRPQK 38
P+ +P +S P+ P +S P+ P +
Sbjct: 760 PEEPEPAESRPEEPEPAESRPEEPEPAR 787
>M.Javanica_Scaff141g002507 on XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 32.0 bits (71), Expect = 0.001, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 11 PQMSDPQKSHPQRSRPQKSHPQRSRPQK 38
P S P++ P SRP++ P SRP++
Sbjct: 755 PAASRPEEPEPAESRPEEPEPAESRPEE 782
Score = 27.3 bits (59), Expect = 0.056, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 13 MSDPQKSHPQRSRPQKSHPQRSRPQKS 39
+S+P S P+ P +S P+ P +S
Sbjct: 752 LSEPAASRPEEPEPAESRPEEPEPAES 778
Score = 26.9 bits (58), Expect = 0.065, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 11 PQMSDPQKSHPQRSRPQKSHPQRSRPQK 38
P+ +P +S P+ P +S P+ P +
Sbjct: 760 PEEPEPAESRPEEPEPAESRPEEPEPAR 787
>M.Javanica_Scaff141g002507 on XP_809289 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 423
Score = 26.6 bits (57), Expect = 0.10, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMC 53
S +R + ++S PQRS + V VL ++MC
Sbjct: 22 SSGRRRKGRESEPQRSNMSRRVFTSAVLLIVVMMC 56
>M.Javanica_Scaff141g002507 on XP_954179 TashAT2 (Establishment) [Theileria annulata]
Length = 1161
Score = 24.6 bits (52), Expect = 0.49, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 11 PQMSDPQKSHPQRSR--PQKSHPQRSRPQK 38
P+ P+ P+R R P+K P+ +P++
Sbjct: 439 PRKHKPEPEQPKRKRGRPRKHKPEPEQPKR 468
Score = 23.5 bits (49), Expect = 1.2, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 11 PQMSDPQKSHPQRSRPQKSHPQRS--RPQK 38
P+ ++ P++ +P+ P+R RP+K
Sbjct: 446 PEQPKRKRGRPRKHKPEPEQPKRKRGRPRK 475
>M.Javanica_Scaff141g002507 on XP_815514 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 811
Score = 24.3 bits (51), Expect = 0.54, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCRAT 56
S +R ++S PQR + V VL ++MC +T
Sbjct: 22 SSGRRREGRESEPQRPHMSRHVFASAVLLLVVMMCCST 59
>M.Javanica_Scaff141g002507 on XP_807450 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 810
Score = 24.3 bits (51), Expect = 0.56, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCRAT 56
S +R ++S PQR + V VL ++MC +T
Sbjct: 22 SSGRRREGRESEPQRPNMSRHVFTSAVLLLVVMMCCST 59
>M.Javanica_Scaff141g002507 on XP_812068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 812
Score = 24.3 bits (51), Expect = 0.57, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCRAT 56
S +R ++S PQR + V VL ++MC AT
Sbjct: 22 SSGRRREGRESEPQRPNMSRHVFASAVLLLVMMMCCAT 59
>M.Javanica_Scaff141g002507 on XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 23.9 bits (50), Expect = 0.75, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCRAT 56
S +R ++S PQR + V VL ++MC T
Sbjct: 22 SSGRRREGRESEPQRPNMSRRVFTSAVLLLVVMMCCGT 59
>M.Javanica_Scaff141g002507 on XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 23.5 bits (49), Expect = 1.0, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCRAT 56
S +R ++S PQR + V VL ++MC T
Sbjct: 22 SSGRRREGRESEPQRPNMSRRVFTSAVLLLLVVMCCGT 59
>M.Javanica_Scaff141g002507 on XP_954175 TashAT3 (Establishment) [Theileria annulata]
Length = 994
Score = 23.5 bits (49), Expect = 1.1, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 11 PQMSDPQKSHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCR----ATKKTFVM 62
P++ + P++ +P+ P+R R + K K+ +L R TKKT+++
Sbjct: 334 PEVPKRRPGRPRKQKPEPEQPKRKRGRPRKQKYETKKTWLLRPRNMKTETKKTWLL 389
Score = 21.6 bits (44), Expect = 6.1, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 21 PQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCR----ATKKTFVM 62
P++ +P+ P+R R + K K+ +L R TKKT+++
Sbjct: 391 PRKQKPEPEQPKRKRGRPRKQKYETKKTWLLRPRNMKTETKKTWLL 436
>M.Javanica_Scaff141g002507 on XP_821714 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 23.5 bits (49), Expect = 1.1, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMC 53
S +R ++S PQR + V VL ++MC
Sbjct: 22 SSGRRREGRESEPQRPNMSRRVFTSAVLLLLVMMC 56
>M.Javanica_Scaff141g002507 on XP_821683 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 23.5 bits (49), Expect = 1.2, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCRAT 56
S +R +S PQR + V+ VL ++MC T
Sbjct: 22 SSGRRREGGESEPQRPNMSRRVITSAVLLLLVMMCCGT 59
>M.Javanica_Scaff141g002507 on XP_816823 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 772
Score = 23.5 bits (49), Expect = 1.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMC 53
S +R ++S PQR + V VL ++MC
Sbjct: 22 SSGRRREGRESEPQRPNMSRRVFTSAVLLLVVMMC 56
>M.Javanica_Scaff141g002507 on XP_821294 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 23.5 bits (49), Expect = 1.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMC 53
S +R ++S PQR + V VL ++MC
Sbjct: 22 SSGRRREGRESEPQRPNMSRHVFTSAVLLLVVMMC 56
>M.Javanica_Scaff141g002507 on XP_812620 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 23.1 bits (48), Expect = 1.4, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCRAT 56
S +R ++S PQR + V VL ++MC T
Sbjct: 22 SSGRRREGRESEPQRLNMSRHVFDSAVLLLVVMMCCGT 59
>M.Javanica_Scaff141g002507 on XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 23.1 bits (48), Expect = 1.4, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCRAT 56
S +R +S PQR + V VL ++MC +T
Sbjct: 22 SSGRRREGGESEPQRPNMSRRVFASAVLLLVVMMCCST 59
>M.Javanica_Scaff141g002507 on XP_811702 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 23.1 bits (48), Expect = 1.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 22 QRSRPQKSHPQRSRPQKSVLKCLVLKSHILMC 53
+R +S PQR+ + V VL ++MC
Sbjct: 25 RRREGGESEPQRANMSRRVFNSAVLLLLVMMC 56
>M.Javanica_Scaff141g002507 on XP_822021 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 22.7 bits (47), Expect = 1.9, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCRAT 56
S +R ++S PQR + V V+ ++MC +T
Sbjct: 22 SSGRRREGRESEPQRPSMSRRVFTSAVVILVVMMCCST 59
>M.Javanica_Scaff141g002507 on XP_954177 TashAT1 (Establishment) [Theileria annulata]
Length = 463
Score = 22.7 bits (47), Expect = 2.2, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 4 KFNYLLYPQMSDPQKSHPQRSR--PQKSHPQRS 34
K +LL P+ P+ P+R R P+K P+ S
Sbjct: 428 KKTWLLRPRKHKPEPEQPKRKRGRPRKQKPEPS 460
Score = 22.3 bits (46), Expect = 3.3, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 11 PQMSDPQKSHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCR----ATKKTFVM 62
P++ + P++ +P+ P+R R + K K+ +L R TKKT+++
Sbjct: 333 PEVPKRRPGRPRKQKPEPEQPKRKRGRPRKQKYETKKTWLLRPRNMKTETKKTWLL 388
>M.Javanica_Scaff141g002507 on XP_802173 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 310
Score = 22.7 bits (47), Expect = 2.2, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCRAT 56
S +R +S PQR + V VL ++MC T
Sbjct: 22 SSGRRREGGESEPQRPNMSRHVFTSAVLLLVVMMCCGT 59
>M.Javanica_Scaff141g002507 on XP_807798 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 875
Score = 22.7 bits (47), Expect = 2.4, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCRAT 56
S R ++S PQR + V VL ++MC T
Sbjct: 22 SSGMRREGRESEPQRPSMYRRVFASAVLLLVVMMCCGT 59
>M.Javanica_Scaff141g002507 on XP_817615 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 860
Score = 22.7 bits (47), Expect = 2.5, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMC 53
S +R ++S PQR + V VL ++MC
Sbjct: 85 SSGRRREGRESEPQRPNMSRRVFTSAVLLLVMMMC 119
>M.Javanica_Scaff141g002507 on XP_819719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 22.3 bits (46), Expect = 2.8, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMC 53
S +R ++S PQR + V VL ++MC
Sbjct: 22 SSGRRGEGRESEPQRPNMSRRVFISAVLLLLVVMC 56
>M.Javanica_Scaff141g002507 on CAE53332 SuAT1 (Establishment) [Theileria annulata]
Length = 558
Score = 21.9 bits (45), Expect = 3.5, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 11 PQMSDPQKSHPQRSRPQKSHPQRSRPQKSVLK 42
P++ P+K P+ + P+R R + LK
Sbjct: 397 PRIRRPRKQKPESETEKVGKPKRKRGRPRKLK 428
>M.Javanica_Scaff141g002507 on XP_802283 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 143
Score = 21.2 bits (43), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 19 SHPQRSRPQKSHPQRSRPQKSVLKCLVLKSHILMCRAT 56
S +R + S PQR + V VL ++MC T
Sbjct: 22 SSGRRREGRGSEPQRPNMSRHVFTSAVLLLVVMMCCGT 59
>M.Javanica_Scaff141g002507 on XP_812950 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 815
Score = 21.2 bits (43), Expect = 7.4, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 28 KSHPQRSRPQKSVLKCLVLKSHILMC 53
+S PQR + V VL ++MC
Sbjct: 31 ESEPQRPNMSRRVFTSAVLLLVVMMC 56
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1398g015372
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348275 RAP1 (Invasion) [Plasmodium falciparum] 26 0.47
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 24 1.9
XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.6
>M.Javanica_Scaff1398g015372 on XP_001348275 RAP1 (Invasion) [Plasmodium falciparum]
Length = 782
Score = 25.8 bits (55), Expect = 0.47, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 52 PPVSSNLILPSERFYNCNPSLFNLNNSTCQQQQVFN 87
PP N + P E Y N +LFN S ++ N
Sbjct: 195 PPAPKNTLTPLEELYPTNVNLFNYKYSLNNMEENIN 230
>M.Javanica_Scaff1398g015372 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 24.3 bits (51), Expect = 1.9, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 62 SERFYNCNPSLFNLNNSTCQQQQVFNT 88
SE +YNC F+ + TC +++ F++
Sbjct: 1396 SEEYYNCTKREFDDPSYTCFRKEAFSS 1422
>M.Javanica_Scaff1398g015372 on XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 822
Score = 23.1 bits (48), Expect = 4.6, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 21 ITSSTSTTTLSPFDITANSTTT 42
+ S ++T+L+P D ANST++
Sbjct: 683 VDSGANSTSLTPVDSGANSTSS 704
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14914g071076
(222 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14311g069575
(223 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814620 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.3
XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.8
>M.Javanica_Scaff14311g069575 on XP_814620 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 25.4 bits (54), Expect = 3.3, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 89 LNKTLELSLTLEQDSFFVGKICDRGQSQSSFISDEFCSP 127
L + E+ T ++ V K+C G ++ S D CSP
Sbjct: 467 LERVKEVLATWKKVDDLVSKLCPSGSTEKSASPDNACSP 505
>M.Javanica_Scaff14311g069575 on XP_806556 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 24.3 bits (51), Expect = 7.8, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 15/53 (28%)
Query: 161 LPLED-PLAHPILSGLWKAEAELLLFNEKIEEESEGKLLAKV----GNEGWVL 208
L +ED L P L G K EA+ E +GK ++ V GNEGWVL
Sbjct: 262 LKMEDGTLVFP-LEGTKKKEAD---------AEEDGKTVSLVIYSTGNEGWVL 304
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14101g069049
(62 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829797 VSG (Establishment) [Trypanosoma brucei] 23 1.1
>M.Javanica_Scaff14101g069049 on XP_829797 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 23.5 bits (49), Expect = 1.1, Method: Composition-based stats.
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 20 GPANLTQRKSKWK 32
GPA T+ K KWK
Sbjct: 457 GPAKTTENKCKWK 469
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15592g072699
(170 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 26 1.2
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.1
XP_820389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.7
CAE53332 SuAT1 (Establishment) [Theileria annulata] 24 4.9
>M.Javanica_Scaff15592g072699 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 26.2 bits (56), Expect = 1.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 82 QIQREKRARKQSGADSEPLTEEEERRIKQPVEERFERE 119
++Q+E+ ++Q + E L +EEE +K+ +ER ERE
Sbjct: 2782 RLQKEEALKRQ---EQERLQKEEE--LKRQEQERLERE 2814
>M.Javanica_Scaff15592g072699 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 25.0 bits (53), Expect = 3.1, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 96 DSEPLTEEEERRIKQP 111
D EPL E EE ++QP
Sbjct: 1623 DDEPLEETEENTVEQP 1638
>M.Javanica_Scaff15592g072699 on XP_820389 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 774
Score = 24.3 bits (51), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 41 GSYGAGNYGMCGRAYSPRFLFMW 63
G A N G+ G+ SPR F W
Sbjct: 61 GGAAANNNGISGQESSPRKHFFW 83
>M.Javanica_Scaff15592g072699 on CAE53332 SuAT1 (Establishment) [Theileria annulata]
Length = 558
Score = 24.3 bits (51), Expect = 4.9, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 96 DSEP--LTEEEERRIKQPVEERFEREGS 121
D EP LTEE+ ++IK V E+ + E S
Sbjct: 194 DDEPEDLTEEQRQKIKDQVLEKIDFEVS 221
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14870g070970
(87 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812546 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.9
XP_821769 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.9
XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.8
Q24824 Amoebapore B (Invasion) [Entamoeba histolytica] 21 8.9
>M.Javanica_Scaff14870g070970 on XP_812546 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 21.9 bits (45), Expect = 6.9, Method: Composition-based stats.
Identities = 7/23 (30%), Positives = 17/23 (73%)
Query: 20 EGIHVTEKQAKISINLNEPEDSL 42
+G +TE +++S ++N P+D++
Sbjct: 529 DGFQLTEPSSRVSWSVNIPDDNV 551
>M.Javanica_Scaff14870g070970 on XP_821769 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 21.9 bits (45), Expect = 6.9, Method: Composition-based stats.
Identities = 7/23 (30%), Positives = 17/23 (73%)
Query: 20 EGIHVTEKQAKISINLNEPEDSL 42
+G +TE +++S ++N P+D++
Sbjct: 529 DGFQLTEPSSRVSWSVNIPDDNV 551
>M.Javanica_Scaff14870g070970 on XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2267
Score = 21.9 bits (45), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 8 DNENIESDLSEGEGIHVTEKQAKISINLNEPEDSLWRFF 46
D+ + E+D+ G G+ + +K+ K + +E + + FF
Sbjct: 597 DDLDYEADVQTGGGLCILKKEKKTDNDPDEIQKTFNNFF 635
>M.Javanica_Scaff14870g070970 on Q24824 Amoebapore B (Invasion) [Entamoeba histolytica]
Length = 96
Score = 21.2 bits (43), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 61 LCKKSLSRGTDQSTSALHKHL 81
LC+K LS G D+ + H+
Sbjct: 64 LCEKILSFGVDELVKLIENHV 84
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14602g070293
(293 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13783g068267
(198 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.7
XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.4
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.4
XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.9
>M.Javanica_Scaff13783g068267 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 25.4 bits (54), Expect = 2.7, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Query: 39 GNPSSSIG------PWNHPFDQNEQTPFNWDQWFQQNPYHGQWPNHLGYG 82
G PS+S+ P+ + NE T D +++P HG+ N G G
Sbjct: 62 GGPSTSVDEQYYYYPYPCSLNHNEHTNIRHDNVDERHPCHGREQNRFGEG 111
>M.Javanica_Scaff13783g068267 on XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2277
Score = 24.6 bits (52), Expect = 4.4, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 144 RWYPPYRHPHYSHQVQSDQSQNTTSDDHFN 173
++ PY + Y H + D + + S+DH N
Sbjct: 2209 KYNEPYYYDFYKHDIYYDVNDDKASEDHIN 2238
>M.Javanica_Scaff13783g068267 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 24.3 bits (51), Expect = 7.4, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 148 PYRHPHYSHQVQ---SDQSQNTTSDDHFNDPVNPPPSFQNPVDQQNPWDWN 195
PY+ P Y ++ NT + D +D N PS P ++ +WN
Sbjct: 3542 PYKSPKYKTLIEVVLEPSGNNTPTSDTPSDTQNDIPSGDTPNNKLTDNEWN 3592
>M.Javanica_Scaff13783g068267 on XP_815479 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1047
Score = 23.9 bits (50), Expect = 7.9, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 5 DAEPSSPVQGQLYEDPENYQQMHSGLNTMPMN---QPGNPSSSIGPWNHPFDQNEQTPFN 61
DAEP+S E + + +P PGN +++ G P + N TP +
Sbjct: 942 DAEPTSAEDTDNISRTEGEESSSEDVKEVPQTVDTAPGNTNTTPGETMIPSESNATTPSD 1001
Query: 62 WDQWFQQNPYHGQWPNHLGYG 82
D + HG++ + L G
Sbjct: 1002 TDVLLE----HGKFGDLLAMG 1018
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14450g069925
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14950g071169
(58 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAA29462 ABRA (Others) [Plasmodium falciparum] 22 4.4
>M.Javanica_Scaff14950g071169 on AAA29462 ABRA (Others) [Plasmodium falciparum]
Length = 743
Score = 21.6 bits (44), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 1 MPTGKKLTEFEKGQITALFNENLSKKEIARRIGRSPKVIRNYLNKGNEYGSKKLSLCK 58
+P L K IT ++ K +A+ G + N+LN+G E G L++ K
Sbjct: 287 VPVNDVLNVNMKNMITGNNFMDVVKNTLAQSGGLGSNDLINFLNQGKEIGENLLNITK 344
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1496g016145
(88 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14433g069887
(181 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827084 VSG (Establishment) [Trypanosoma brucei] 28 0.25
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.79
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.1
>M.Javanica_Scaff14433g069887 on XP_827084 VSG (Establishment) [Trypanosoma brucei]
Length = 487
Score = 28.5 bits (62), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 7/45 (15%)
Query: 47 SLADLNLEFQNLCEIADDLSQAH-TN------WMSLRSSMTGPER 84
S +DL ++ EIADD +H TN W RS + GPE+
Sbjct: 75 SFSDLERATKDWEEIADDRKHSHETNEGHRKFWTGARSKLGGPEK 119
>M.Javanica_Scaff14433g069887 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 26.9 bits (58), Expect = 0.79, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 13/105 (12%)
Query: 49 ADLNLEFQNLCEIADDLSQAHTNWMSLRSSMTGPERMADNSIYDQFYAQHPYMEAL--TR 106
DL F++ CE Q H W + + TG + DN+ P L +
Sbjct: 900 GDLQNTFKDACEQKYGYPQRHWGWKCISDTTTG--KSGDNTGSSGAICIPPRRRKLYIGK 957
Query: 107 LKQYKRHLRSAQRLFEGALPSASAQSTSHAHIPKMNLPSFSGKSA 151
+K++ G +A Q A P+ PS SGK +
Sbjct: 958 IKEWAN---------SGNTQAAEPQEDGKAQTPQGQTPSQSGKES 993
>M.Javanica_Scaff14433g069887 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 24.6 bits (52), Expect = 4.1, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 25 SFNVPLKGPTQSNAQFNDAIQASLADLNLEFQNLCEIADDLSQAHTNWMSLRS 77
S N K ++Q N+ + ASL D ++++ CE SQA + S+RS
Sbjct: 1895 SANCEYKCMKYPSSQNNNNMPASLDDTPSDYKDTCECTK--SQASSRNFSVRS 1945
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff143g002536
(266 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 27 1.1
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 26 2.5
XP_821148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.9
XP_810286 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.4
XP_815662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.2
XP_807738 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.8
XP_818096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.0
>M.Javanica_Scaff143g002536 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 27.3 bits (59), Expect = 1.1, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 116 FAKNNEEFKKIVKDIRPIGGTTNTYEAMKLAVKLMETRNKTIPTLV 161
F NN++ I++DI + N + + + + T NK + L+
Sbjct: 919 FNNNNQKLDNILQDINAMNLNINILQTLNIGINACNTNNKNVEHLL 964
>M.Javanica_Scaff143g002536 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 26.2 bits (56), Expect = 2.5, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 237 KCRTTTTTSTTTTTTTTTTTTTTNP 261
KC TT+ + TTT ++ TTT P
Sbjct: 1900 KCVPTTSGGSGVTTTAGSSVTTTPP 1924
>M.Javanica_Scaff143g002536 on XP_821148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 25.8 bits (55), Expect = 2.9, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 34 FGTKTTVNAQQLPRGDTIFPVSCYLNVMIILDRSDSVLG-GFNRSRDFVLAASEELNIGP 92
F TV+ LP GDT P+ L V + D + +LG +N+ R + L+ N
Sbjct: 573 FTLVATVSIHNLPEGDTPIPL---LGVKMNGDNNKVLLGLSYNKERKWQLSCGGGTNSQE 629
Query: 93 HAHS 96
H+ +
Sbjct: 630 HSSA 633
>M.Javanica_Scaff143g002536 on XP_810286 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 25.8 bits (55), Expect = 3.4, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 113 PWNFAKNNEEFKKIVKDIRPIGGTTNTYEAMKLAVKLMETRNKT 156
PWN+ K NE +++ GG+ E L + TR KT
Sbjct: 124 PWNYNKQNESLTRLIGG----GGSGVRMEDGTLVFPVEGTRKKT 163
>M.Javanica_Scaff143g002536 on XP_815662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 963
Score = 25.4 bits (54), Expect = 4.2, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 113 PWNFAKNNEEFKKIVKDIRPIGGTTNTYEAMKLAVKLMETRNKT 156
PWN+ K NE +++ GGT + L + TR KT
Sbjct: 238 PWNYNKQNESLTRLIGG----GGTGVKMKDGTLVFPVEGTRKKT 277
>M.Javanica_Scaff143g002536 on XP_807738 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 896
Score = 25.0 bits (53), Expect = 5.8, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 113 PWNFAKNNEEFKKIVKDIRPIGGTTNTYEAMKLAVKLMETRNKT 156
PWN+ K NE +V GG+ E L + TR KT
Sbjct: 241 PWNYNKKNESLALLVGS----GGSGVKMEDGTLVFPVEGTRKKT 280
>M.Javanica_Scaff143g002536 on XP_818096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 25.0 bits (53), Expect = 6.0, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 113 PWNFAKNNEEFKKIVKDIRPIGGTTNTYEAMKLAVKLMETRNKT 156
PWN+ K NE +V GG+ E L + TR KT
Sbjct: 241 PWNYNKKNESLALLVGS----GGSGVKMEDGTLVFPVEGTRKKT 280
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1405g015418
(82 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.9
AAK94670 SUB1 (Protease) [Toxoplasma gondii] 22 4.8
>M.Javanica_Scaff1405g015418 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 22.7 bits (47), Expect = 3.9, Method: Composition-based stats.
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 23 EQSFANELPTIRDLPCYG 40
++ ++N +P + PCYG
Sbjct: 799 DEKYSNRIPRKSEGPCYG 816
>M.Javanica_Scaff1405g015418 on AAK94670 SUB1 (Protease) [Toxoplasma gondii]
Length = 255
Score = 22.3 bits (46), Expect = 4.8, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 46 VHRERARRIYCQIEGHVRSLFIHGLVL 72
+H + A+R+ ++ GHV L G+VL
Sbjct: 150 LHSDLAQRVVKELNGHVDVLRESGVVL 176
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15476g072424
(112 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14874g070985
(115 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.1
XP_812514 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.1
>M.Javanica_Scaff14874g070985 on XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 23.5 bits (49), Expect = 4.1, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 6/84 (7%)
Query: 24 PNSYPPEIAILSTANEGLNMIELGTLQNHAVTLNISYMQVHPSLDNDVLPLGATRRF--- 80
P+ PP L NEG+ T VT ++ Q L ++ P G T+
Sbjct: 756 PDGQPPPDLKLLNGNEGVGGGSTSTSAPSTVTTSLGKEQSTIQLSSETSP-GGTKTVDGG 814
Query: 81 --KRSGQLLEMTVARLFPGNRVSQ 102
Q +E PG+R Q
Sbjct: 815 SSSNGDQTVEAEAGDTVPGDRPPQ 838
>M.Javanica_Scaff14874g070985 on XP_812514 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 23.1 bits (48), Expect = 5.1, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 61 MQVHPSLDNDVLPLGATRRFKRSGQLLEMTVARLFPGNRVS 101
+Q+ S++ DV+ R + GQLLE + + P S
Sbjct: 727 VQMDGSIEGDVIQPSGVGRPEEQGQLLESSGVNVVPAPTAS 767
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1295g014526
(52 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.13
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.4
XP_809961 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.7
>M.Javanica_Scaff1295g014526 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 25.4 bits (54), Expect = 0.13, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 13 ISNECQVSAAQEEQQFSRQVRP-YADRAANQVGRVKGTW 50
++NEC +S + SR RP Y +++ +++ W
Sbjct: 1302 LNNECDISLEHSNRNTSRSQRPCYGKDGYDKMFKIENGW 1340
>M.Javanica_Scaff1295g014526 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 22.7 bits (47), Expect = 1.4, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 13 ISNECQVSAAQEEQQFSR 30
I NEC + + E QF R
Sbjct: 1891 IENECTLPTTESEDQFLR 1908
>M.Javanica_Scaff1295g014526 on XP_809961 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 916
Score = 21.9 bits (45), Expect = 2.7, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 ISTILTFLLLISNECQVSAAQEEQQFSRQVRPYADR 38
+ST LLL+ C + + Q + V Y +R
Sbjct: 43 VSTSAVLLLLVVMMCAAAGTVQAQNYGTGVDDYYER 78
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13841g068412
(606 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_843647 VSG (Establishment) [Trypanosoma brucei] 28 1.9
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 28 2.4
XP_808791 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.5
XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum] 27 3.8
XP_820307 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.0
XP_802934 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.5
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 27 5.5
XP_628559 gp900 (Adhesin) [Cryptosporidium parvum] 26 6.9
XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.1
XP_808394 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.7
XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 8.2
>M.Javanica_Scaff13841g068412 on XP_843647 VSG (Establishment) [Trypanosoma brucei]
Length = 543
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 12/93 (12%)
Query: 428 VENVIENEAEELNLIRDGRSM----SRRRRRTRSRIPENLNNETINQETAQNTTNEGNKP 483
++N+I+NE+ E +L +DG + + + PE L E +T + T GN
Sbjct: 323 LKNIIDNESGEYDLSKDGEQIKTVAEKLFKHGEDNYPEKLYKEA-QAKTLRKTLMAGNTA 381
Query: 484 TEKTNASTSTNGGENKIDETLNQNIPNKEKLDS 516
T TN E ID + Q + K+D
Sbjct: 382 TSLTNL-------ETPIDLQIAQMYYTQRKIDG 407
>M.Javanica_Scaff13841g068412 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 133 LYLRIKFKNPLDNKYLIKIDNEPKMHYLIKIFKEKNKKIEFASRELSEDEWQGKT 187
L+L+ K + P+D L + N PK Y I K KN+ I + S +++GKT
Sbjct: 2453 LFLKKKTQTPVD---LFSVINIPKSDYDIPTLKSKNRYIPYKSA-----QYKGKT 2499
>M.Javanica_Scaff13841g068412 on XP_808791 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 194
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Query: 456 RSRIPENLNNETINQETAQNTTNEGNKPTEKTNASTSTNGGENKIDETLNQNIPNKEKLD 515
R +PE +E+ EG++ TN + ST K DE ++N+ + +
Sbjct: 33 RREVPET-------EESVSGVHMEGDQKYSPTNGAASTMEQAGKADEDSSRNVTTNDSMQ 85
Query: 516 S--NKETTTDKETNQNNDES 533
++E TD T + S
Sbjct: 86 HSIDREEDTDVLTAVGTNSS 105
>M.Javanica_Scaff13841g068412 on XP_001349219 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2595
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 466 ETINQETAQNTTNEGNKPTEKTNASTSTNGGENKIDETLNQNIPNKEKLDSNKETTTDKE 525
E + + + NTT GN T N +T++ G N +I N + + S+K TD E
Sbjct: 2208 EVVLEPSGNNTTASGNNTTASGNNTTAS--GNNTTASDTQNDIQN-DGIPSSK--ITDNE 2262
Query: 526 TNQNNDESKKAEPPNTPPN 544
N DE PNT PN
Sbjct: 2263 WNTLKDEFISQYLPNTEPN 2281
>M.Javanica_Scaff13841g068412 on XP_820307 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 964
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Query: 471 ETAQNTTNEGNKPTEKTNASTSTNGGENKIDETLNQNIPNKEKLDSNKETTTDKETNQNN 530
++A T EG+ + +S+ GG+ +D + E + T+ +TN
Sbjct: 821 QSASGTYPEGHP---NVDVDSSSEGGQT-VDAEAGDTVQGDETQQPSVGTSATADTNAPT 876
Query: 531 DESKKAEPPNTPPNIGETSKRNGKTSRSKSRKAKDD 566
E+ + P +G S NG+T+ + + K+D
Sbjct: 877 AETMAPDGTAVAPEVGAHSGENGETAGGTNGQEKED 912
>M.Javanica_Scaff13841g068412 on XP_802934 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 136
Score = 25.4 bits (54), Expect = 5.5, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 21/51 (41%)
Query: 460 PENLNNETINQETAQNTTNEGNKPTEKTNASTSTNGGENKIDETLNQNIPN 510
PE + TA NE ++ + +TST GE KI N P+
Sbjct: 39 PEGATERQTQETTAPLVENEDSEDVGTASGNTSTLPGETKIPSGSNATAPS 89
>M.Javanica_Scaff13841g068412 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 8/55 (14%)
Query: 133 LYLRIKFKNPLDNKYLIKIDNEPKMHYLIKIFKEKNKKIEFASRELSEDEWQGKT 187
L+ K K+ +D L+++ + PK Y I K KN+ I +AS D ++GKT
Sbjct: 1715 FLLKKKSKSTID---LLRVIDIPKGEYGIPTSKSKNRYIPYAS-----DRYKGKT 1761
>M.Javanica_Scaff13841g068412 on XP_628559 gp900 (Adhesin) [Cryptosporidium parvum]
Length = 1937
Score = 26.2 bits (56), Expect = 6.9, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Query: 457 SRIPENLNNETINQETAQNTTNEGNKPTEKTNASTSTNGGENKIDETLNQNIPNKEKLDS 516
+ +P + NN+ +N ET +T + T K NGG DE K++ D
Sbjct: 1320 TNLPIDGNNQLVNPET-NSTVSGSTSGTTKPKPGIPVNGGGVVPDEEA------KDQADK 1372
Query: 517 NKETTTDKETNQ-NNDESKKAEPPNTPPNI 545
K+ TN N D + NT NI
Sbjct: 1373 GKDGLIVPPTNSINKDPVTNTQYSNTTGNI 1402
>M.Javanica_Scaff13841g068412 on XP_821548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 477 TNEGNKPTEKTNASTSTNGGENKIDETLNQNIPNKEKLDSNKETTTDKETNQNND--ESK 534
+ G T +T+++G E + L+ P+ N + +D E + ++
Sbjct: 817 SGAGGLSTSTEYTATTSSGEEGSANHFLSGK-PSDGTQKVNGDLLSDGEQRAGTEVGDTV 875
Query: 535 KAEPPNTPPNIGETSKRNGKTSRSKSRK 562
+ + P P + +S NGKT+R K +
Sbjct: 876 QGDGPTVNPEVSVSSGENGKTARGKDGR 903
>M.Javanica_Scaff13841g068412 on XP_808394 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 29/79 (36%)
Query: 460 PENLNNETINQETAQNTTNEGNKPTEKTNASTSTNGGENKIDETLNQNIPNKEKLDSNKE 519
P N T Q T + T G +PTE+ + S+ + T + E+ N
Sbjct: 711 PANDTVTTSTQATVPSLTPAGTQPTEQATLNASSVPSGSTPSTTAESSSAEPEQATLNAS 770
Query: 520 TTTDKETNQNNDESKKAEP 538
+ ES+ AEP
Sbjct: 771 SVPSGGAPSTPAESRPAEP 789
>M.Javanica_Scaff13841g068412 on XP_810753 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 25.8 bits (55), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 477 TNEGNKPTEKTNASTSTNGGENKIDETLNQNIPNKEKLDSNKETTTDKETNQNND--ESK 534
+ G T +T+++G E + L+ P+ N + +D E + ++
Sbjct: 814 SGAGGLSTSTEYTATTSSGEEGSANHFLSGK-PSDGTQKVNGDLLSDGEQRAGTEVGDTV 872
Query: 535 KAEPPNTPPNIGETSKRNGKTSRSKSRK 562
+ + P P + +S NGKT+R K +
Sbjct: 873 QGDGPTVNPEVSVSSGENGKTARGKDGR 900
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15371g072175
(53 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAY44834 MSA-1 (Invasion) [Babesia bovis] 22 1.9
AAY44829 MSA-1 (Invasion) [Babesia bovis] 22 2.0
>M.Javanica_Scaff15371g072175 on AAY44834 MSA-1 (Invasion) [Babesia bovis]
Length = 320
Score = 22.3 bits (46), Expect = 1.9, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Query: 10 LSQKQDFELILVSFDS-ARG 28
LS+ DF ++VSFD ARG
Sbjct: 188 LSEGSDFNKLVVSFDEFARG 207
>M.Javanica_Scaff15371g072175 on AAY44829 MSA-1 (Invasion) [Babesia bovis]
Length = 318
Score = 22.3 bits (46), Expect = 2.0, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Query: 10 LSQKQDFELILVSFDS-ARG 28
LS+ DF ++VSFD ARG
Sbjct: 188 LSEGSDFNKLVVSFDEFARG 207
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14461g069956
(70 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804689 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.011
XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.014
XP_812546 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.073
XP_821769 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.073
XP_804173 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.77
XP_804567 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.1
XP_805733 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.2
XP_810777 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.3
XP_817165 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.9
XP_806844 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.1
XP_821683 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.3
XP_808396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.6
XP_809996 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.6
XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_804817 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.2
XP_804139 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.7
XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.0
XP_805203 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.9
XP_808582 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.1
XP_805726 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.6
XP_819563 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.6
XP_816532 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.6
XP_814038 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.7
XP_813585 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.7
XP_810808 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.0
XP_001611736 variant erythrocyte surface antigen-1, alpha subun... 22 6.9
XP_809573 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 8.0
XP_816852 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 8.1
XP_816855 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 8.1
XP_805359 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 8.4
>M.Javanica_Scaff14461g069956 on XP_804689 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 213
Score = 29.3 bits (64), Expect = 0.011, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 15 YEPK-QYEGVLVALGNEINLYIDQLRVDTIRM----DRPIEWIKF 54
+EPK +Y+ L+ GN+I++Y+D + + +RP+E+++F
Sbjct: 83 WEPKKEYQVALMLQGNKISVYVDGKSLGEEELPLTGERPLEYLRF 127
>M.Javanica_Scaff14461g069956 on XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 28.9 bits (63), Expect = 0.014, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Query: 18 KQYEGVLVALGNEINLYIDQLRVDT----IRMDRPIEWIKF 54
K+Y+ L+ GN+I++Y+D + ++ +RP+E+++F
Sbjct: 618 KEYQVALMLQGNKISVYVDGKSLGEEELPLQSERPLEYLRF 658
>M.Javanica_Scaff14461g069956 on XP_812546 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 26.9 bits (58), Expect = 0.073, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 5 EDIVDLEHFYYEPK-QYEGVLVALGNEINLYID 36
ED + E +EPK +Y+ VL+ GN+ ++Y+D
Sbjct: 607 EDKITTESRPWEPKKEYQVVLMLQGNKASVYVD 639
>M.Javanica_Scaff14461g069956 on XP_821769 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 26.9 bits (58), Expect = 0.073, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 5 EDIVDLEHFYYEPK-QYEGVLVALGNEINLYID 36
ED + E +EPK +Y+ VL+ GN+ ++Y+D
Sbjct: 607 EDKITTESRPWEPKKEYQVVLMLQGNKASVYVD 639
>M.Javanica_Scaff14461g069956 on XP_804173 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 746
Score = 24.3 bits (51), Expect = 0.77, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 15 YEPKQ-YEGVLVALGNEINLYID--QLRVDTIRM--DRPIEWIK--FGRMGREEG 62
+EPK+ Y+ L+ GN+ ++YID L + + + + P+E ++ FG G + G
Sbjct: 611 WEPKKGYQVALMLQGNKASVYIDGESLGEEEVPLTGEAPLELLRFCFGTCGEDAG 665
>M.Javanica_Scaff14461g069956 on XP_804567 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 704
Score = 23.9 bits (50), Expect = 1.1, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 15 YEPKQYEGVLVAL-GNEINLYIDQL----RVDTIRMDRPIEWIKF 54
+EPK+ V + L GN+ ++YID V + + P+E++ F
Sbjct: 597 WEPKKEHQVALMLQGNKASVYIDGKLLGEEVTQLTGETPLEYVHF 641
>M.Javanica_Scaff14461g069956 on XP_805733 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 23.5 bits (49), Expect = 1.2, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 8/40 (20%)
Query: 9 DLEHF-YYE-------PKQYEGVLVALGNEINLYIDQLRV 40
D EH+ YYE K Y+ +L +E ++Y+D++RV
Sbjct: 575 DDEHYEYYEGKYNWQPNKTYQVMLQMDASEWDVYVDRMRV 614
>M.Javanica_Scaff14461g069956 on XP_810777 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 23.5 bits (49), Expect = 1.3, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 15 YEPKQYEGVLVAL-GNEINLYID--QLRVDT--IRMDRPIEWIKF 54
+EPK+ V + L GN++++YID LR + ++ + P+E F
Sbjct: 636 WEPKKEHQVALMLQGNKVSVYIDGESLREEEAPLKGETPLELFGF 680
>M.Javanica_Scaff14461g069956 on XP_817165 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 750
Score = 23.1 bits (48), Expect = 1.9, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 16 EPK-QYEGVLVALGNEINLYID 36
EPK +Y+ L+ GN+ ++YID
Sbjct: 616 EPKKEYQVALILQGNKASVYID 637
>M.Javanica_Scaff14461g069956 on XP_806844 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 740
Score = 23.1 bits (48), Expect = 2.1, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 15 YEPK-QYEGVLVALGNEINLYID-QLRVDTIRM---DRPIEWIKF 54
+EPK +Y+ L+ GN+ ++Y+D +L + M + P+E ++F
Sbjct: 616 WEPKKEYQVALMLQGNKASVYVDGKLLGEEETMLTGETPLELVRF 660
>M.Javanica_Scaff14461g069956 on XP_821683 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 22.7 bits (47), Expect = 2.3, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 12 HFYYEPKQYEGVLVALGNEINLYIDQLRVDTIRMD 46
H E ++ +L+ GN+ ++Y+D RV ++D
Sbjct: 632 HLETENSEHVVILLRNGNQGSVYVDGQRVGDAQLD 666
>M.Javanica_Scaff14461g069956 on XP_808396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 22.7 bits (47), Expect = 2.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 30 EINLYIDQLRVDTIRMDRPIEWIKFGRMGREE 61
++NL++D L TI + + + + G REE
Sbjct: 368 DLNLHVDALITATIEGRKVMLYTQRGNFSREE 399
>M.Javanica_Scaff14461g069956 on XP_809996 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 22.7 bits (47), Expect = 2.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 30 EINLYIDQLRVDTIRMDRPIEWIKFGRMGREE 61
++NL++D L TI + + + + G REE
Sbjct: 369 DLNLHVDALITATIEGRKVMLYTQRGNFSREE 400
>M.Javanica_Scaff14461g069956 on XP_804171 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 22.7 bits (47), Expect = 3.0, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 5 EDIVDLEHFYYEPKQYEGVLVAL-GNEINLYID 36
ED + +EPK+ V + L GN+I+++ID
Sbjct: 602 EDNTKTQSSTWEPKKEHQVALMLQGNKISVHID 634
>M.Javanica_Scaff14461g069956 on XP_804817 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 22.3 bits (46), Expect = 3.2, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Query: 15 YEPK-QYEGVLVALGNEINLYID 36
+EPK +Y+ L+ G ++++YID
Sbjct: 634 WEPKKEYQVALMLQGQKVSVYID 656
>M.Javanica_Scaff14461g069956 on XP_804139 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 793
Score = 22.3 bits (46), Expect = 3.7, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 18 KQYEGVLVALGNEINLYIDQLRVDT----IRMDRPIEWIKF 54
K+Y+ L+ GN+ ++YID + + +RP+E F
Sbjct: 622 KEYQVALMLQGNKASVYIDGQSLGEEETLLTAERPLELAVF 662
>M.Javanica_Scaff14461g069956 on XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 22.3 bits (46), Expect = 4.0, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 18 KQYEGVLVALGNEINLYID-QLRVDT---IRMDRPIEWIKF 54
K+Y+ L+ GN+ ++Y+D QL + ++ + P+E + F
Sbjct: 618 KEYQVALMLQGNKSSMYVDGQLLGEEETLLKGEAPLELVSF 658
>M.Javanica_Scaff14461g069956 on XP_805203 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 844
Score = 21.9 bits (45), Expect = 4.9, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 18 KQYEGVLVALGNEINLYID 36
K+++ L+ GN+I++YID
Sbjct: 637 KEHQVALMLQGNKISVYID 655
>M.Javanica_Scaff14461g069956 on XP_808582 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 21.9 bits (45), Expect = 5.1, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 18 KQYEGVLVALGNEINLYIDQLRVDT----IRMDRPIEWIKF 54
K+Y+ L+ GN+ ++Y+D + + ++P+E + F
Sbjct: 613 KEYQVALMLQGNKSSMYVDGQSLGEKETLLTGEKPLELVHF 653
>M.Javanica_Scaff14461g069956 on XP_805726 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 327
Score = 21.6 bits (44), Expect = 5.6, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 13 FYYEPKQYEGVLVALGNEINLYIDQLRV---DTIRM--DRPIEWIKFGRMGREEG 62
F+ K+Y+ L+ GNE Y+D + DT+R +R + + F G E G
Sbjct: 203 FWVPKKEYQVALMLNGNEGYFYLDAELLGTSDTMRRREERAYDVLGFYFGGDESG 257
>M.Javanica_Scaff14461g069956 on XP_819563 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 720
Score = 21.9 bits (45), Expect = 5.6, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 18 KQYEGVLVALGNEINLYID 36
K+Y+ L+ GN+ ++YID
Sbjct: 619 KEYQVALMLQGNKASVYID 637
>M.Javanica_Scaff14461g069956 on XP_816532 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 725
Score = 21.9 bits (45), Expect = 5.6, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 18 KQYEGVLVALGNEINLYID 36
K+Y+ L+ GN+ ++YID
Sbjct: 617 KEYQVALMLQGNKASVYID 635
>M.Javanica_Scaff14461g069956 on XP_814038 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 790
Score = 21.9 bits (45), Expect = 5.7, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 18 KQYEGVLVALGNEINLYID 36
K+Y+ L+ GN+ ++YID
Sbjct: 624 KEYQVALMLQGNKASVYID 642
>M.Javanica_Scaff14461g069956 on XP_813585 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 800
Score = 21.9 bits (45), Expect = 5.7, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 18 KQYEGVLVALGNEINLYID 36
K+Y+ L+ GN+ ++YID
Sbjct: 619 KEYQVALMLQGNKASVYID 637
>M.Javanica_Scaff14461g069956 on XP_810808 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 735
Score = 21.6 bits (44), Expect = 6.0, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 15 YEPKQYEGVLVAL-GNEINLYIDQLRVDT----IRMDRPIEWIK--FGRMGREEG 62
+EPK+ V + L GN+ ++YID + + + P+E ++ FG ++EG
Sbjct: 617 WEPKKEHQVALMLQGNKASVYIDGELLGEEEAPLTGEAPLELVRFCFGAYDQKEG 671
>M.Javanica_Scaff14461g069956 on XP_001611736 variant erythrocyte surface antigen-1, alpha
subunit (Establishment) [Babesia bovis]
Length = 1365
Score = 21.6 bits (44), Expect = 6.9, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 8 VDLEHFYYEPKQYEGVLVALGNE 30
V+LE++ YE EG+ + GN+
Sbjct: 58 VELEYYGYEGDVKEGITDSSGND 80
>M.Javanica_Scaff14461g069956 on XP_809573 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 674
Score = 21.2 bits (43), Expect = 8.0, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 13 FYYEPKQYEGVLVALGNEINLYID 36
F+ K+Y+ L+ GNE Y+D
Sbjct: 614 FWVPKKEYQVALMLNGNEGYFYLD 637
>M.Javanica_Scaff14461g069956 on XP_816852 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 739
Score = 21.2 bits (43), Expect = 8.1, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 18 KQYEGVLVALGNEINLYID 36
K+Y+ L+ GN+ ++YID
Sbjct: 620 KEYQVALMLQGNKSSVYID 638
>M.Javanica_Scaff14461g069956 on XP_816855 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 754
Score = 21.2 bits (43), Expect = 8.1, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 18 KQYEGVLVALGNEINLYID 36
K+Y+ L+ GN+ ++YID
Sbjct: 582 KEYQVALMLQGNKSSVYID 600
>M.Javanica_Scaff14461g069956 on XP_805359 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 788
Score = 21.2 bits (43), Expect = 8.4, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 18 KQYEGVLVALGNEINLYID 36
K+Y+ L+ GN+ ++Y+D
Sbjct: 619 KEYQVTLMLQGNKSSMYVD 637
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14443g069905
(319 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806226 Trans-sialidase (Invasion) [Trypanosoma cruzi] 32 0.068
XP_819381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.28
XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.3
XP_001611206 variant erythrocyte surface antigen-1, alpha subun... 27 1.9
XP_819737 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.0
XP_829775 VSG (Establishment) [Trypanosoma brucei] 26 4.2
XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.7
AAT99618 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 25 9.0
>M.Javanica_Scaff14443g069905 on XP_806226 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 31.6 bits (70), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 60/141 (42%), Gaps = 13/141 (9%)
Query: 36 EEKREFIYLKNVEIKDRFVVKIIQKNNNKYDSYKNNI--DGYLRSIDLNLDKNMFVVEII 93
+++ F+Y KD V ++ + +YD+ K+ DG+ D+ L + +
Sbjct: 176 DDRLRFLYGPTAVAKDNKVFLLVGSSTTRYDNVKDTWVKDGW----DIQLVEGVATQSTD 231
Query: 94 DRSKYIPSDQLKKKILIEI---TNNEIIQNFLPGFEKMVLRNNNFI----ENNNCYETSI 146
+ + IL +I T ++++Q G +V++N+ + N Y SI
Sbjct: 232 GVQSTLINWAEPNSILQQIPKQTQDQLMQLLTAGGSGIVMQNDTLVFPLTANGKNYPFSI 291
Query: 147 LDKSGRNNNFNIIEESIQNYK 167
+ S N N + ESI ++
Sbjct: 292 ITYSTDNGNTWVFPESISPWE 312
>M.Javanica_Scaff14443g069905 on XP_819381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1046
Score = 29.6 bits (65), Expect = 0.28, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 137 ENNNCYETSILDKSGRNNNFNIIEESIQNYKDELLSSYWTEINLIGYKI-ELLE--KQKV 193
EN++ +S+L KSG++N +E I Y+++ +Y NL+ ++ E LE K+ V
Sbjct: 411 ENDDAAASSLLMKSGKDN-----KELISLYENKKDGAY----NLVAVRLAEKLERIKEVV 461
Query: 194 EYPKELKNRIIYIGNKIRGIIEGNKQNCFNCRV 226
+ K+L + + Y + G ++ K+ N RV
Sbjct: 462 KTWKDLDSALQYCSSGSSGTVDVRKKGMCNDRV 494
>M.Javanica_Scaff14443g069905 on XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 27.3 bits (59), Expect = 1.3, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Query: 137 ENNNCYETSILDKSGRNNNFNIIEESIQNYKDE 169
EN++ +S+L KSG+NNN EE I Y+++
Sbjct: 410 ENDDAAASSLLMKSGKNNN----EELISLYENK 438
>M.Javanica_Scaff14443g069905 on XP_001611206 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1285
Score = 26.9 bits (58), Expect = 1.9, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 177 EINLIGYKIELLEKQKVEYPKELKNRIIYIGNKIRGIIEGNKQ 219
E++ + K++ LE +K E KE+K+ ++ IGN + + GN Q
Sbjct: 630 ELDGVMKKVKALEGEKTEGIKEVKDVLVTIGNVVVQL--GNAQ 670
>M.Javanica_Scaff14443g069905 on XP_819737 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1112
Score = 26.9 bits (58), Expect = 2.0, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 137 ENNNCYETSILDKSGRNNNFNIIEESIQNYKDELLSSYWTEINLIGYKI-ELLE--KQKV 193
EN++ +S+L KSGR+N EE I Y+++ + NL+ ++ E LE K+ V
Sbjct: 479 ENDDAAASSLLMKSGRDNK----EELISLYENKKSDGSY---NLVAVRLTEKLERIKEVV 531
Query: 194 EYPKELKNRIIYIGNKIRGIIEGNKQNCFN 223
+ K+L + + Y + G ++ +++ N
Sbjct: 532 KTWKDLGSALQYCSSGSSGNVDALRKDMCN 561
>M.Javanica_Scaff14443g069905 on XP_829775 VSG (Establishment) [Trypanosoma brucei]
Length = 503
Score = 25.8 bits (55), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 166 YKDELLSSYWTEIN--LIGYKIELLEKQKVEYPKELKNRIIYIG--NKIRGIIEGNKQNC 221
Y ++SY T L+G K + + + P+ + I Y+ N+I+ IEGNK C
Sbjct: 359 YSTAFINSYDTAAVTLLVGGKPKSEKLNTITNPENIAKAISYLAATNQIKQTIEGNKDQC 418
>M.Javanica_Scaff14443g069905 on XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2109
Score = 25.0 bits (53), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 3 KFNFIILIYLIRFLKIQCAGKLIHVEVKIKDDWEE-KREFI--YLKNVEIKDRFVVKIIQ 59
K+ +I + L + +G + H ++W + K++FI L+N + + V+
Sbjct: 1781 KYKTLIEVVLEPSKRDIPSGDIPHTNKFTDNEWNQLKKDFISNMLQNTQNTEPNVL---- 1836
Query: 60 KNNNKYDSYKNNIDGYLRSIDLNLDKNMFVVEIIDRSKYIPSDQLKKKILIEITNNEIIQ 119
+D+ NN + N+D+ F++ I DR+ YI ++ +++ N
Sbjct: 1837 -----HDNVDNNTHPTMSR--HNVDQKPFIMSIHDRNLYI-----GEEYSYDMSTNSGEN 1884
Query: 120 NFLPGFEKMVLRNNNFIENNNCYETSILDKSGRNNNFNIIEESIQNYKDELLSSYWTEIN 179
N G + N++ Y L N +++I +E ++ ++EL + T+ N
Sbjct: 1885 NLYSGIDPTSA-------NHDSYSGIDLINDALNGDYDIYDEILKRKENELFGTNHTKKN 1937
>M.Javanica_Scaff14443g069905 on AAT99618 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum]
Length = 620
Score = 24.6 bits (52), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 142 YETSILDKSGRNNNFNIIEE-SIQNYKDELLSSYWTEINLIGYKIELLEKQKVEYPKELK 200
+E + DK NN ++ ++ + QN + +YWT + Y+I Q V+Y K+ K
Sbjct: 507 WELKLKDKCTGNNGKSLCQDKTCQNVCTNM--NYWTYTRKLAYEI-----QSVKYDKDRK 559
Query: 201 NRIIYIGNKIRGIIEGNKQNCFNCRVTQ 228
+ + ++ N +NC N T+
Sbjct: 560 LFSLAKDKNVTTFLKENAKNCSNIDFTK 587
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13955g068684
(572 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_846883 VSG (Establishment) [Trypanosoma brucei] 29 0.80
XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum] 28 2.6
>M.Javanica_Scaff13955g068684 on XP_846883 VSG (Establishment) [Trypanosoma brucei]
Length = 525
Score = 28.9 bits (63), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 339 FNETEECVKNGCNLTATPTTTTFSDYNLNKI 369
N+++EC +NGC T TT D + K+
Sbjct: 411 HNKSKECTENGCKWKGTDETTGTCDVDETKV 441
>M.Javanica_Scaff13955g068684 on XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2277
Score = 27.7 bits (60), Expect = 2.6, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 357 TTTTFSDYNLNKILDFLDLNALRHVLINLEFLDSSAGFDYFSVGLMGDVFIAKNGSDKQN 416
T F++ + N D + + +L +LE + +D++ + DV K D N
Sbjct: 2184 TMNEFTNMDTNP-----DKSTMDTILDDLEKYNEPYYYDFYKHDIYYDVNDDKASEDHIN 2238
Query: 417 I--NKLNNNNS-LQTSINNDNDLLFNSENVDN 445
+ NK++NNNS + T++ + +++ N E + N
Sbjct: 2239 MDHNKMDNNNSDVPTNVQIEMNVINNQELLQN 2270
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13g000348
(781 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.71
XP_817007 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.4
XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum] 26 9.0
>M.Javanica_Scaff13g000348 on XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 31/123 (25%)
Query: 34 PERKNLEPIKGNINDDQISPAHGLNALKLQTKTLMEQALLNLTSPEDLPEKKYL---DPI 90
P+R EP+K N+ D +S A A + T D+ + D +
Sbjct: 764 PQRMQHEPLKANVGGDGVSSA----------------AFVATTPSSDVAQAVTTGSEDTM 807
Query: 91 KENPTQKSPKKNHNSTNHKSNSPQTDG--------LGDIQLPRIKTSF----QGHNEELL 138
+ N + ++P+ + +S + TDG +G++ + +S QG+N +
Sbjct: 808 RGNGSPQTPESSTSSGEDGETAGGTDGQEEEVHPQVGEVNATALSSSLGNVSQGNNSDAG 867
Query: 139 SLR 141
+LR
Sbjct: 868 ALR 870
>M.Javanica_Scaff13g000348 on XP_817007 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 910
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 307 KKSSTSPRSPLISSQPLNET 326
KKS+T PRSP +S P+ T
Sbjct: 727 KKSATPPRSPAVSGLPVEGT 746
>M.Javanica_Scaff13g000348 on XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2199
Score = 26.2 bits (56), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 259 RTKKGGNYENESNFDGSERTSIIELRKKLKNSKRNVIDEYDRLGSN 304
R K+G E +N+DG E+ + K+LK S+ +D++ +L +N
Sbjct: 427 RKKRGAGVETATNYDGYEK----KFYKELKESEYGKVDDFLKLLNN 468
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13160g066629
(340 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.6
XP_001610713 variant erythrocyte surface antigen-1, alpha subun... 25 5.9
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.2
>M.Javanica_Scaff13160g066629 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 27.3 bits (59), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 250 VGGSHPPTPINFSALVRGNGGMTKR-KPKGVGGFHLPHQ 287
GG++ P + L+ G GG+T R P G G H+
Sbjct: 56 TGGTNKPCDFGYDKLISGRGGVTARGDPCGKDGTGKEHR 94
>M.Javanica_Scaff13160g066629 on XP_001610713 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1294
Score = 25.4 bits (54), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 42/115 (36%), Gaps = 27/115 (23%)
Query: 226 PTQMSHLSAGHLDGGGVCRQKPKGVGGSHPPTPINFSALVRGNG--GMTKRKPKGVGGFH 283
P SHL GH +G G C P P+ F + +G MT ++ G+ F
Sbjct: 865 PLASSHL--GHCNGSGQC-----------CPLPMGFRGQFQKDGITNMTGQRLYGILYFF 911
Query: 284 LPHQQFLVLVQVVVR-EMRHDKGKPKGVGEIFG-----------SRTANDGGNQC 326
V +VR P+ +G++FG +T N G QC
Sbjct: 912 SNENMMQSCVYTLVRVTAELSATTPQVLGDVFGFFRGGVGNKDSGKTKNAGNRQC 966
>M.Javanica_Scaff13160g066629 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 25.4 bits (54), Expect = 6.2, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 32 TSSNYSQIYNEFPPNNISL-TELSNEFNVSQE 62
T+ N ++Y FPPN+ S + SN FN ++
Sbjct: 1698 TTINEKEMYKVFPPNSDSCDNKSSNRFNSEKQ 1729
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15605g072734
(64 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.1
>M.Javanica_Scaff15605g072734 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 23.5 bits (49), Expect = 1.1, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 9/35 (25%)
Query: 19 TGSHNKACDFCCKYKDCLLSLTALVGCDLAGCKND 53
T H K CD C K+K V C C ND
Sbjct: 1322 TFKHAKYCDPCPKFK---------VDCKNGKCDND 1347
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15577g072662
(81 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.23
>M.Javanica_Scaff15577g072662 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 26.2 bits (56), Expect = 0.23, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 27 LKILLNSKQWRHLENDLNNYNRQNLVAR 54
+ ILLN + + L NDLN+Y +L R
Sbjct: 502 IDILLNDNKKKVLSNDLNDYKECDLFKR 529
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13376g067188
(102 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.2
XP_806774 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.3
XP_829767 VSG (Establishment) [Trypanosoma brucei] 23 3.7
XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.9
XP_810953 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.1
XP_816181 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.5
XP_844694 VSG (Establishment) [Trypanosoma brucei] 23 5.8
AAK07772 MSA-1 (Invasion) [Babesia bovis] 22 8.3
AAK07771 MSA-1 (Invasion) [Babesia bovis] 22 8.7
>M.Javanica_Scaff13376g067188 on XP_965997 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2879
Score = 23.5 bits (49), Expect = 3.2, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 46 ANNDVKEEQEV-DEIKEDVVREAPKQAEK----DLETNQGEADTAGKQGDTIKPLTF 97
A + K +EV DE + V +E ++ K +LE N + G+ T KP TF
Sbjct: 6 AEDSNKSAKEVLDEFGQQVYKEKVEKDAKIYKGELEGNLASSSILGETASTDKPCTF 62
>M.Javanica_Scaff13376g067188 on XP_806774 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 837
Score = 23.5 bits (49), Expect = 3.3, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 43 VSFANNDVKEEQEVDEIKEDVVREAPKQAEKDLETNQGEADTAGKQGDTI-KPLT 96
+ + + KEE + +++K V+ E P + AD+ K G + +P T
Sbjct: 130 LKWTDESSKEELDKNKLKTQVLEECPSEEAACASQKAAGADSQSKFGGIVARPTT 184
>M.Javanica_Scaff13376g067188 on XP_829767 VSG (Establishment) [Trypanosoma brucei]
Length = 452
Score = 23.1 bits (48), Expect = 3.7, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 67 APKQAEKDLETNQGEADTAGKQGDTIKP 94
A EKDL+ N G A Q + I+P
Sbjct: 118 ATDNNEKDLKANYGLATATAGQIEAIRP 145
>M.Javanica_Scaff13376g067188 on XP_818889 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 750
Score = 23.1 bits (48), Expect = 4.9, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 51 KEEQEVDEIKEDVVREAPKQAEKDLETNQGEADTAGKQGDTI-KPLT 96
KEE + +++K V+ E P + AD+ K G + +P T
Sbjct: 52 KEELDKNKLKTQVLEECPSEEAACASQKAAGADSQSKFGGIVARPTT 98
>M.Javanica_Scaff13376g067188 on XP_810953 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 23.1 bits (48), Expect = 5.1, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 43 VSFANNDVKEEQEVDEIKEDVVREAPKQAEKDLETNQGEA 82
++ KEE + ++K V+ E P E+ +G A
Sbjct: 133 LTLDKKQTKEELDASKVKTQVLEECPSDKEECASQPEGHA 172
>M.Javanica_Scaff13376g067188 on XP_816181 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 967
Score = 22.7 bits (47), Expect = 5.5, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 43 VSFANNDVKEEQEVDEIKEDVVREAPKQAEK 73
++ KEE + ++K V+ E P EK
Sbjct: 129 LTLDKKQTKEELDASKVKTQVLEECPSDKEK 159
>M.Javanica_Scaff13376g067188 on XP_844694 VSG (Establishment) [Trypanosoma brucei]
Length = 491
Score = 22.7 bits (47), Expect = 5.8, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 65 REAPKQAEKDLETNQGEADTAGKQGDTIK--PLTFAVCYF 102
+EA K AE G+ +T G+ IK PL A F
Sbjct: 451 KEAVKAAESKETNKDGKTNTTGRNSFVIKDSPLWLAFLLF 490
>M.Javanica_Scaff13376g067188 on AAK07772 MSA-1 (Invasion) [Babesia bovis]
Length = 339
Score = 22.3 bits (46), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 57 DEIKEDVVREAPKQAEKDLETNQGEADTAGKQGDTIKP 94
+E+ + R+ P+Q G+ DTAG+ P
Sbjct: 235 EELVASIERQTPQQETSAQGETTGQPDTAGQPSSPGSP 272
>M.Javanica_Scaff13376g067188 on AAK07771 MSA-1 (Invasion) [Babesia bovis]
Length = 334
Score = 22.3 bits (46), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 57 DEIKEDVVREAPKQAEKDLETNQGEADTAGKQGDTIKP 94
+E+ + R+ P+Q G+ DTAG+ P
Sbjct: 235 EELVASIERQTPQQETSAQGETTGQPDTAGQPSSPGSP 272
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff142g002534
(165 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAD21778 ESAG-7 (Establishment) [Trypanosoma brucei] 25 1.7
CAD21779 ESAG-7 (Establishment) [Trypanosoma brucei] 25 1.7
CAD21456 ESAG-7 (Establishment) [Trypanosoma brucei] 24 4.6
XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.3
>M.Javanica_Scaff142g002534 on CAD21778 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 340
Score = 25.4 bits (54), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 27 STCTNPNLYLPNSITQNGHSPIVIDKWPEGPQKAALFNKVSRSLSPRERRKRYSLLESPS 86
+C NL + + S V+ +W E P K ++F V R + + K + + +
Sbjct: 247 GSCVAGNLKIKGGEYGDVSSHDVV-RWTEDPSKVSIFKDVIRLFARFQEAKNAVMNKIKT 305
Query: 87 SIDE 90
++DE
Sbjct: 306 TVDE 309
>M.Javanica_Scaff142g002534 on CAD21779 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 340
Score = 25.4 bits (54), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 27 STCTNPNLYLPNSITQNGHSPIVIDKWPEGPQKAALFNKVSRSLSPRERRKRYSLLESPS 86
+C NL + + S V+ +W E P K ++F V R + + K + + +
Sbjct: 247 GSCVAGNLKIKGGEYGDVSSHDVV-RWTEDPSKVSIFKDVIRLFARFQEAKNAVMNKIKT 305
Query: 87 SIDE 90
++DE
Sbjct: 306 TVDE 309
>M.Javanica_Scaff142g002534 on CAD21456 ESAG-7 (Establishment) [Trypanosoma brucei]
Length = 338
Score = 24.3 bits (51), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 15 IINFSFASTSSDSTCTNPNLYLPNSITQNGHSPIVIDKWPEGPQKAALFNKVSRSLSPRE 74
++NF + C NL + + S + +W E P K ++F V R + +
Sbjct: 241 VLNFGY--------CVAGNLKIKGGEYGDVGSHDAV-RWTEDPSKVSIFKDVIRLFARFQ 291
Query: 75 RRKRYSLLESPSSIDE 90
K + + +++DE
Sbjct: 292 EVKNAVVKKIKTTVDE 307
>M.Javanica_Scaff142g002534 on XP_810391 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 885
Score = 23.5 bits (49), Expect = 7.3, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 21/29 (72%), Gaps = 5/29 (17%)
Query: 11 NTLLIINFS-----FASTSSDSTCTNPNL 34
+T++ +NF+ FA++++ + CTNP++
Sbjct: 271 STIMYMNFTQQHWAFANSATHAGCTNPSI 299
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14343g069662
(223 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.23
XP_812988 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.1
XP_812068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 1.7
XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.0
>M.Javanica_Scaff14343g069662 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 29.3 bits (64), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 1 MKLISILIFLIFNSILWSLINSVKKNKNQKELIRV 35
+K+I I++++ LW + KK K+ +L+RV
Sbjct: 1782 LKVIYIVVYMYIYIYLWMYMYVWKKTKSTIDLLRV 1816
>M.Javanica_Scaff14343g069662 on XP_812988 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 889
Score = 26.9 bits (58), Expect = 1.1, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 13 NSILWSLINSVKKNK--------NQKELIRVEETSKDLNKILNYGAESSSNLDAQKYEGD 64
NSIL+ L K+ K N KEL E + + +L G + S+ +D Q GD
Sbjct: 598 NSILFGLSYDNKEKKWQLLCGGGNPKELSSTSEKTHHVVILLRNGNQGSAYVDGQPVLGD 657
Query: 65 QYRKKQYQKNREKSLEY 81
+Y K+++ S Y
Sbjct: 658 AQCALKYTKDKKISHFY 674
>M.Javanica_Scaff14343g069662 on XP_812068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 812
Score = 26.2 bits (56), Expect = 1.7, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 132 SLQADNDEGTYFVNSKNNDCESERKEPVKENVQLDQGNILLQNDNSIKSSHKDEGSSVNP 191
S ADN T F + K ES EP KE+ Q ++LQ + K+S +G S+
Sbjct: 594 SYTADNKWETIFKDDKKPTTESRPWEPKKEH----QVALMLQGN---KASVYIDGKSLGE 646
Query: 192 QKADNEDK 199
++A + D+
Sbjct: 647 EEALSTDE 654
>M.Javanica_Scaff14343g069662 on XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2287
Score = 24.6 bits (52), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 18 SLINSVKKNKNQKELIRVEETSKDLNKILNYGAESSSNLDAQKYEGD 64
++I+++KK+ ++ L R + + ++KILN G + S+ + + GD
Sbjct: 1117 TMIDTLKKSGDKDMLQREQNIKEAIDKILNSGNKEPSDEQRKTWWGD 1163
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1431g015636
(185 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820300 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.4
XP_843646 VSG (Establishment) [Trypanosoma brucei] 25 3.1
>M.Javanica_Scaff1431g015636 on XP_820300 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 660
Score = 25.4 bits (54), Expect = 2.4, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
Query: 58 PALTSVPMTRSVPETHWQEYLAVPEPDWSHHRDFNSKQSLDLFVRERIAAGWVKHPRLKS 117
P + SV +T + +E LA W D SK V + + P +K
Sbjct: 455 PGMVSVLLTAQLQRV--KEVLAT----WKKADDIVSKLCTSESVEKDASTEDACSPTVKI 508
Query: 118 TSKKRGGLSIKIHYLCCKFYYRGCHAVMKIETEDGPEGFTATS 160
T+ G LS + Y G +A +K E DG G T TS
Sbjct: 509 TAGLVGFLSGNFSENTWRDEYLGVNATVKKENGDGETGATKTS 551
>M.Javanica_Scaff1431g015636 on XP_843646 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 25.0 bits (53), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 96 SLDLFVRERIAAGWVKHPRLKSTSKKRGGLSIKIH 130
+L + + AA W+ R KS+ +KR G+S K H
Sbjct: 366 TLTTALETQTAAAWLIPQRAKSSQQKREGVSPKQH 400
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14024g068856
(286 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAY44837 MSA-1 (Invasion) [Babesia bovis] 25 3.8
AAU87405 ROP4 (Establishment) [Toxoplasma gondii] 25 6.8
XP_816459 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 10.0
>M.Javanica_Scaff14024g068856 on AAY44837 MSA-1 (Invasion) [Babesia bovis]
Length = 318
Score = 25.4 bits (54), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 156 IQRNYYKRNRSEKIQYQKIYTQNNKEKRNKYMREYRQKKKNIQSDNNEGT 205
+QR + + + E +QY TQ N+ K +Y +++ K + + +N T
Sbjct: 137 LQRISHMQAKLESLQYGPQMTQENRTKAEEYFKQHVHKTEGSVNVDNMAT 186
>M.Javanica_Scaff14024g068856 on AAU87405 ROP4 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 24.6 bits (52), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 230 NLFSQGEEESNKGGD--EQNQIEVEEPNK 256
N S+GE E ++GG EQ +E+ P++
Sbjct: 68 NTVSEGEAEGSRGGSWLEQEGVELRSPSQ 96
>M.Javanica_Scaff14024g068856 on XP_816459 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 24.3 bits (51), Expect = 10.0, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 14/16 (87%)
Query: 242 GGDEQNQIEVEEPNKM 257
GGDEQ +++V EPN++
Sbjct: 670 GGDEQCELKVTEPNEI 685
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1385g015253
(102 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.10
XP_812620 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.14
XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.17
XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.22
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 26 0.39
XP_808582 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.70
XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.73
XP_821677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.90
XP_807454 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.91
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.94
XP_813679 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.0
AAC37226 SBP1 (Others) [Babesia bovis] 25 1.4
XP_804223 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.6
XP_806744 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.6
XP_819563 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.9
XP_815192 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.0
XP_818862 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.0
XP_804567 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.1
XP_809659 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.1
XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.2
XP_816532 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.2
XP_001350954 RESA (Others) [Plasmodium falciparum] 24 2.4
XP_811687 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_810696 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.1
XP_812069 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.6
>M.Javanica_Scaff1385g015253 on XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 27.7 bits (60), Expect = 0.10, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
Query: 25 EASCGGCCVTCGVVPAPALPPVPAPA------PV-PVPAPVTYTVQVPVPVPAPVSYVPS 77
E G + +P P PVPA A PV P+ VT +Q VP PA P+
Sbjct: 712 ETEIGALNASKVTIPPPERKPVPAKALTTTSPPVEPLTTSVTTEMQPTVPSPATAGPQPT 771
>M.Javanica_Scaff1385g015253 on XP_812620 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 27.3 bits (59), Expect = 0.14, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 12/76 (15%)
Query: 31 CCVTCGVVPAPALPPVPAPAPVPVPAPVTY---------TVQVPVPVPAPVSY---VPSC 78
CC TCG A P A P V PV++ + + VP V V +
Sbjct: 56 CCGTCGAAAAEGSIPGNAIDPFTVTTPVSFANWKEFKDGSKITSLRVPGLVKVGDDVFAV 115
Query: 79 GFGGCGGCYGCGGCGG 94
CG G G C G
Sbjct: 116 AEAQCGERNGAGSCAG 131
>M.Javanica_Scaff1385g015253 on XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 830
Score = 27.3 bits (59), Expect = 0.17, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 40 APALPPVPAPAPVPVPAPVTYTVQVPVPVPAPVSYVPSCGFGG 82
APALP VP P VP T + AP + S G G
Sbjct: 751 APALPAVPGPREVPAAPGRTTVGRTANTQHAPAGSLTSAGNEG 793
>M.Javanica_Scaff1385g015253 on XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 26.9 bits (58), Expect = 0.22, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 40 APALPPVPAPAPVPVPAPVTYTVQVPVPVPAPVSYVPSCGFGG 82
APALP VP P VP T + AP + S G G
Sbjct: 755 APALPAVPGPREVPAAPGRTTVGRTANNQHAPAGRLTSAGNEG 797
>M.Javanica_Scaff1385g015253 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 26.2 bits (56), Expect = 0.39, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 12/33 (36%)
Query: 39 PAPALPPVPAPAPVPVPAPVTYTVQVPVPVPAP 71
P P P P P PV P PV P P
Sbjct: 518 PNPVEKPTPEENPNPVEKPTPEENPNPVEKPEP 550
Score = 25.8 bits (55), Expect = 0.60, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 12/33 (36%)
Query: 39 PAPALPPVPAPAPVPVPAPVTYTVQVPVPVPAP 71
P P P P P PV P PV P P
Sbjct: 506 PEPVEKPNPEENPNPVEKPTPEENPNPVEKPTP 538
>M.Javanica_Scaff1385g015253 on XP_808582 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 786
Score = 25.4 bits (54), Expect = 0.70, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 36 GVVP---APALPPVPAPAPVPVPAPVTYTVQVPVPVPAPVSYVPSCGFGG 82
G VP APA P VP P VP T + AP + S G G
Sbjct: 701 GGVPQTIAPAGPAVPGPREVPAAPGRTTVGRTANTQHAPAGSLTSAGNEG 750
>M.Javanica_Scaff1385g015253 on XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 25.4 bits (54), Expect = 0.73, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 10/21 (47%)
Query: 39 PAPALPPVPAPAPVPVPAPVT 59
P PA PP A VP P T
Sbjct: 773 PVPAAPPSTVAAGSSVPKPAT 793
>M.Javanica_Scaff1385g015253 on XP_821677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 25.0 bits (53), Expect = 0.90, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 17/44 (38%)
Query: 42 ALPPVPAPAPVPVPAPVTYTVQVPVPVPAPVSYVPSCGFGGCGG 85
AL P AP PV TV P P P + P G GG
Sbjct: 706 ALNPNKAPITSPVTENAPETVLQPPAKPQPSEHEPLTTNIGAGG 749
>M.Javanica_Scaff1385g015253 on XP_807454 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 25.0 bits (53), Expect = 0.91, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 51 PVPVPAPVTYTVQVPVPVPAPVSYVP 76
PVP AP P+P+ VS VP
Sbjct: 728 PVPKRAPEPQVKIAPIPIAPTVSAVP 753
>M.Javanica_Scaff1385g015253 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 25.0 bits (53), Expect = 0.94, Method: Composition-based stats.
Identities = 9/14 (64%), Positives = 9/14 (64%)
Query: 88 GCGGCGGYGYGCGK 101
GC GC G G GC K
Sbjct: 1029 GCKGCMGNGQGCTK 1042
>M.Javanica_Scaff1385g015253 on XP_813679 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 25.0 bits (53), Expect = 1.0, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 13/26 (50%)
Query: 51 PVPVPAPVTYTVQVPVPVPAPVSYVP 76
PVP AP VP PV VS VP
Sbjct: 726 PVPKRAPEPQVKIVPNPVAPAVSAVP 751
>M.Javanica_Scaff1385g015253 on AAC37226 SBP1 (Others) [Babesia bovis]
Length = 596
Score = 24.6 bits (52), Expect = 1.4, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 11/30 (36%)
Query: 41 PALPPVPAPAPVPVPAPVTYTVQVPVPVPA 70
PA P PA P P + P PA
Sbjct: 380 PAEKPAETPAETPAETPAETPAETPAETPA 409
Score = 24.6 bits (52), Expect = 1.4, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 11/30 (36%)
Query: 41 PALPPVPAPAPVPVPAPVTYTVQVPVPVPA 70
PA P PA P P + P PA
Sbjct: 384 PAETPAETPAETPAETPAETPAETPAETPA 413
Score = 24.6 bits (52), Expect = 1.4, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 11/30 (36%)
Query: 41 PALPPVPAPAPVPVPAPVTYTVQVPVPVPA 70
PA P PA P P + P PA
Sbjct: 388 PAETPAETPAETPAETPAETPAETPAETPA 417
Score = 24.6 bits (52), Expect = 1.5, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 11/30 (36%)
Query: 41 PALPPVPAPAPVPVPAPVTYTVQVPVPVPA 70
PA P PA P P + P PA
Sbjct: 364 PAEKPAETPAETPAETPAEKPAETPAETPA 393
Score = 24.3 bits (51), Expect = 1.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 11/30 (36%)
Query: 41 PALPPVPAPAPVPVPAPVTYTVQVPVPVPA 70
PA P PA P P + P PA
Sbjct: 368 PAETPAETPAETPAEKPAETPAETPAETPA 397
Score = 24.3 bits (51), Expect = 1.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 11/30 (36%)
Query: 41 PALPPVPAPAPVPVPAPVTYTVQVPVPVPA 70
PA P PA P P + P PA
Sbjct: 376 PAETPAEKPAETPAETPAETPAETPAETPA 405
Score = 23.5 bits (49), Expect = 2.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 11/30 (36%)
Query: 41 PALPPVPAPAPVPVPAPVTYTVQVPVPVPA 70
PA P PA P P + P PA
Sbjct: 372 PAETPAETPAEKPAETPAETPAETPAETPA 401
>M.Javanica_Scaff1385g015253 on XP_804223 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 746
Score = 24.3 bits (51), Expect = 1.6, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 46 VPAPAPVPVPAPVTYTVQVPVPVPAPVS 73
V P P +P+PV VP P A S
Sbjct: 464 VDDPVPAALPSPVVAGSSVPEPAIAAES 491
>M.Javanica_Scaff1385g015253 on XP_806744 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 789
Score = 24.3 bits (51), Expect = 1.6, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 46 VPAPAPVPVPAPVTYTVQVPVPVPAPVS 73
V P P +P+PV VP P A S
Sbjct: 507 VDDPVPAALPSPVVAGSSVPEPAIAAES 534
>M.Javanica_Scaff1385g015253 on XP_819563 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 720
Score = 24.3 bits (51), Expect = 1.9, Method: Composition-based stats.
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 31 CCVTCGVVPA 40
CC TCG PA
Sbjct: 57 CCATCGATPA 66
>M.Javanica_Scaff1385g015253 on XP_815192 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 722
Score = 24.3 bits (51), Expect = 2.0, Method: Composition-based stats.
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 31 CCVTCGVVPA 40
CC TCG PA
Sbjct: 57 CCATCGATPA 66
>M.Javanica_Scaff1385g015253 on XP_818862 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 790
Score = 24.3 bits (51), Expect = 2.0, Method: Composition-based stats.
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 31 CCVTCGVVPA 40
CC TCG PA
Sbjct: 56 CCATCGATPA 65
>M.Javanica_Scaff1385g015253 on XP_804567 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 704
Score = 24.3 bits (51), Expect = 2.1, Method: Composition-based stats.
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 31 CCVTCGVVPA 40
CC TCG PA
Sbjct: 38 CCATCGAAPA 47
>M.Javanica_Scaff1385g015253 on XP_809659 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 796
Score = 23.9 bits (50), Expect = 2.1, Method: Composition-based stats.
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 31 CCVTCGVVPA 40
CC TCG PA
Sbjct: 58 CCATCGATPA 67
>M.Javanica_Scaff1385g015253 on XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 721
Score = 23.9 bits (50), Expect = 2.2, Method: Composition-based stats.
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 31 CCVTCGVVPA 40
CC TCG PA
Sbjct: 56 CCATCGATPA 65
>M.Javanica_Scaff1385g015253 on XP_816532 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 725
Score = 23.9 bits (50), Expect = 2.2, Method: Composition-based stats.
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 31 CCVTCGVVPA 40
CC TCG PA
Sbjct: 57 CCATCGATPA 66
>M.Javanica_Scaff1385g015253 on XP_001350954 RESA (Others) [Plasmodium falciparum]
Length = 654
Score = 23.9 bits (50), Expect = 2.4, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 22/71 (30%), Gaps = 21/71 (29%)
Query: 28 CGGCCVTCGVVPAPALPPVPAPAPVPVPAPVTYTVQVPVPVPAPVSYVPSCGFGGCGGCY 87
C C TCG PA + Y VP P +Y S G G
Sbjct: 249 CNETCTTCG------------------PAAIDY---VPADAPNGYAYGGSAHDGSHGNLR 287
Query: 88 GCGGCGGYGYG 98
G G GYG
Sbjct: 288 GHDNKGSEGYG 298
>M.Javanica_Scaff1385g015253 on XP_811687 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 722
Score = 23.5 bits (49), Expect = 3.0, Method: Composition-based stats.
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 31 CCVTCGVVPA 40
CC TCG PA
Sbjct: 56 CCSTCGATPA 65
>M.Javanica_Scaff1385g015253 on XP_810696 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 937
Score = 23.5 bits (49), Expect = 3.1, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
Query: 31 CCVTCGVVPAPA-LPPVP 47
CC TCG V LP VP
Sbjct: 57 CCATCGTVQGEEDLPAVP 74
>M.Javanica_Scaff1385g015253 on XP_812069 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 23.1 bits (48), Expect = 4.6, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 53 PVPAPVTYTVQVPVPVPAPVS 73
PV V Q VP P PV+
Sbjct: 741 PVTTSVAKNTQATVPAPTPVA 761
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13459g067389
(116 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAZ38163 RON2 (Invasion) [Toxoplasma gondii] 26 0.43
>M.Javanica_Scaff13459g067389 on AAZ38163 RON2 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 26.2 bits (56), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 81 RGETVEFNVPVEGEPIPKCQWSINGTP 107
R E +V G P+P WS +GTP
Sbjct: 110 RQEGFTLSVLTAGGPLPHGSWSWSGTP 136
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14101g069050
(369 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 25 6.8
>M.Javanica_Scaff14101g069050 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 25.4 bits (54), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 107 EEPFQRPAHLKQHIVVHTGEQPYVCKHVNQNGDRCDKSFTQLNNLKIHQQTHAAERIIYK 166
+ F++PA + +HT E+ C + N D S T N IH+ + I
Sbjct: 383 DNTFRQPAGMNYAGYIHTLEKGAFCSNGNVFPKNADDSSTSDTN--IHKCGALIKLYILS 440
Query: 167 CAY 169
CAY
Sbjct: 441 CAY 443
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15978g073575
(107 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.36
XP_821146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.9
>M.Javanica_Scaff15978g073575 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 26.6 bits (57), Expect = 0.36, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 59 NYLE-----LNAVDGSVMELKYTTESLGLIGEGQTNNASYLNNKN 98
NY+E LN +G E +YTT++ L+ E T N +N
Sbjct: 37 NYIEELKGDLNTANGRSSETRYTTDTCTLVKEYYTTRLGVNNERN 81
>M.Javanica_Scaff15978g073575 on XP_821146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 23.9 bits (50), Expect = 2.9, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 18 EYPSINAVDHSKSLGKRKAVSTS 40
EY +NA +KS G +KA +TS
Sbjct: 526 EYLGVNATVKNKSEGGKKATNTS 548
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15034g071385
(117 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819966 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.24
XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.1
XP_821148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.3
XP_811702 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.3
XP_809902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.4
XP_821146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.5
XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.4
XP_805718 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.4
XP_810777 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.0
XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.8
>M.Javanica_Scaff15034g071385 on XP_819966 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 716
Score = 27.3 bits (59), Expect = 0.24, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 75 SKDGGVVVVRKEGRRKRLANLEKMREGGDLTLEKKNLKEN 114
S+ V+ R RR+ + + +MREGG+ ++ N+ +
Sbjct: 3 SRVAAVMAPRTHNRRRVIGSSGRMREGGESEPQRSNMSRH 42
>M.Javanica_Scaff15034g071385 on XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 25.4 bits (54), Expect = 1.1, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 75 SKDGGVVVVRKEGRRKRLANLEKMREGGDLTLEKKNLKENKLN 117
S+ V R E RR+ + + REG + L++ N+ N
Sbjct: 3 SRVAAVKTTRTENRRRVTGSSGRRREGRECELQRPNMSRRVFN 45
>M.Javanica_Scaff15034g071385 on XP_821148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 25.0 bits (53), Expect = 1.3, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 75 SKDGGVVVVRKEGRRKRLANLEKMREGGDLTLEKKNLKEN 114
S+ V R RR+ + +MREGG+ +++N+ +
Sbjct: 3 SRVAAVKAPRTHNRRRVTGSSGRMREGGESEPQRRNMSRH 42
>M.Javanica_Scaff15034g071385 on XP_811702 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 25.0 bits (53), Expect = 1.3, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 75 SKDGGVVVVRKEGRRKRLANLEKMREGGDLTLEKKNLKENKLN 117
S+ V+ R RR+ ++ + REGG+ ++ N+ N
Sbjct: 3 SRVAAVMAPRTHNRRRVTGSIGRRREGGESEPQRANMSRRVFN 45
>M.Javanica_Scaff15034g071385 on XP_809902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 955
Score = 23.9 bits (50), Expect = 3.4, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 75 SKDGGVVVVRKEGRRKRLANLEKMREGGDLTLEKKNLKEN 114
S+ V R RR+ + + REGG+ L++ N+ +
Sbjct: 3 SRVAAVKAPRTHNRRRVTGSSGRRREGGESELQRPNMSRH 42
>M.Javanica_Scaff15034g071385 on XP_821146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 23.5 bits (49), Expect = 4.5, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 75 SKDGGVVVVRKEGRRKRLANLEKMREGGDLTLEKKNLKEN 114
S+ V R RR+ + +MREGG+ ++ N+ +
Sbjct: 3 SRVAAVKAPRTHNRRRVTGSSGRMREGGESEPQRPNMSRH 42
>M.Javanica_Scaff15034g071385 on XP_818477 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 23.1 bits (48), Expect = 5.4, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 75 SKDGGVVVVRKEGRRKRLANLEKMREGGDLTLEKKNL 111
S+ V +R + RR+ + + REGG+ ++ N+
Sbjct: 3 SRVAAVKALRTQNRRRVTGSSGRRREGGESEPQRSNM 39
>M.Javanica_Scaff15034g071385 on XP_805718 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 482
Score = 23.1 bits (48), Expect = 5.4, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 75 SKDGGVVVVRKEGRRKRLANLEKMREGGDLTLEKKNLKENKLN 117
S+ V R RR+ + + REGG+ ++ N+ N
Sbjct: 3 SRAAAVKAPRTHNRRRVTGSSGRRREGGESEPQRPNMSRRVFN 45
>M.Javanica_Scaff15034g071385 on XP_810777 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 23.1 bits (48), Expect = 6.0, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 75 SKDGGVVVVRKEGRRKRLANLEKMREGGDLTLEKKNLKENKLN 117
S+ V R RR+ + + REGG+ ++ N+ N
Sbjct: 3 SRVAAVKAPRTHNRRRVTGSSGRRREGGESEQQRPNMSRRVFN 45
>M.Javanica_Scaff15034g071385 on XP_001349737 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2199
Score = 23.1 bits (48), Expect = 6.8, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 64 TQMGGLAREDCSKDGG 79
T+M G +EDC K+GG
Sbjct: 1274 TEMLGKIKEDCYKNGG 1289
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15945g073490
(185 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.3
ACB87908 Rh5 (Adhesin) [Plasmodium falciparum] 25 2.9
XP_818883 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 7.0
>M.Javanica_Scaff15945g073490 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.4 bits (54), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 14 ILKNYSEGAPKKSKGETS--GQQPQEWKCEWFGCISRFDNEGVFDLHVKQHARTAQ 67
ILK YS+ + GE S G Q + WKC + ++ D G + V Q+ + +
Sbjct: 528 ILKKYSKFCKNGATGEKSKNGNQIETWKCYYDENENKKDGNGAINFCVLQNDKIGK 583
>M.Javanica_Scaff15945g073490 on ACB87908 Rh5 (Adhesin) [Plasmodium falciparum]
Length = 526
Score = 25.0 bits (53), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 85 RTCNFVDHTVVHTQVKPYVCTHVNDGV 111
+T N DH+ T +K Y+ T+VNDG+
Sbjct: 72 KTNNAKDHS---TYIKSYLNTNVNDGL 95
>M.Javanica_Scaff15945g073490 on XP_818883 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 980
Score = 23.9 bits (50), Expect = 7.0, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 15 LKNYSEG--APKKSKGETSGQQPQEWKCEWFGCISRFDNEGVFD 56
LK +G P+ +KG SG++ + + EW S + +GV +
Sbjct: 187 LKEVGDGYWTPRMAKGTVSGEEDGKKEFEWNQVASTTNLQGVLN 230
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15193g071760
(221 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349578 MSP2 (Invasion) [Plasmodium falciparum] 26 1.6
XP_810676 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.5
>M.Javanica_Scaff15193g071760 on XP_001349578 MSP2 (Invasion) [Plasmodium falciparum]
Length = 272
Score = 26.2 bits (56), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query: 150 PRHKLAESEEKGNGQLSLHHLLTKEVIPPKDYKNSSSVLWDS 191
P HK AE+ KG G++ + KE +N+S+V DS
Sbjct: 122 PNHKNAETNPKGKGEVQEPNQANKET------QNNSNVQQDS 157
>M.Javanica_Scaff15193g071760 on XP_810676 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1040
Score = 24.3 bits (51), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 103 YCNTPKGETLELPEFDTFVPRTHDVGIVILDSKKTTNAPVTFPTINKP 150
Y K ET L + T + R +DVG++ +++ + + + T+ P
Sbjct: 379 YSENHKKETGRLHLWMTDMQRIYDVGLISAENEDVAASTLLYATVEVP 426
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16181g073998
(139 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.1
AAB63303 MIC2 (Invasion) [Toxoplasma gondii] 23 4.9
ACB87908 Rh5 (Adhesin) [Plasmodium falciparum] 23 7.2
>M.Javanica_Scaff16181g073998 on XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2275
Score = 25.8 bits (55), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 10 KIFADLYYDLVAPELKSSFYTET 32
K F DL+Y VA LK S Y ET
Sbjct: 650 KTFHDLFYYWVAHMLKDSIYWET 672
>M.Javanica_Scaff16181g073998 on AAB63303 MIC2 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 23.5 bits (49), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 85 IGDINRQKSQSKRGGGTVCMKNKNIAKIYFS--AIGAVECCINETE 128
I D R++ + RGG + + + S AIGA E C N+ +
Sbjct: 31 IVDALRKRYDTSRGGDANGVDTSGVEDVIQSDSAIGAAEGCTNQLD 76
>M.Javanica_Scaff16181g073998 on ACB87908 Rh5 (Adhesin) [Plasmodium falciparum]
Length = 526
Score = 23.1 bits (48), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 63 ENIKFDNTKDHSKWAVSQETICIGD 87
ENIK +N KDHS + S + D
Sbjct: 69 ENIKTNNAKDHSTYIKSYLNTNVND 93
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13729g068120
(264 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum] 27 2.1
>M.Javanica_Scaff13729g068120 on XP_001350413 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2860
Score = 26.6 bits (57), Expect = 2.1, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 202 NTNLGDKMSISNV---FVDNSISFLCQEYRGIRGIISEMRPTSECKPNENCAKTS 253
NT+ +K + +NV + D+ L YR I +++ + ++CK EN K S
Sbjct: 401 NTSTTNKRTNNNVNVMYYDDFYKELQGRYRTINELLNSLNEETKCKSTENTDKES 455
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1425g015590
(161 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804086 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.6
XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.0
XP_815234 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.2
XP_812850 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.2
>M.Javanica_Scaff1425g015590 on XP_804086 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 742
Score = 25.4 bits (54), Expect = 1.6, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 56 AKQNFQLGQILSKTTSKTSKNSSKNQRKNKKPK 88
A QN LGQ K T+ +++N + K+K K
Sbjct: 452 APQNSHLGQASEKDTTPSTQNQGLSPEKSKNEK 484
>M.Javanica_Scaff1425g015590 on XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 24.3 bits (51), Expect = 4.0, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 56 AKQNFQLGQILSKTTSKTSKNSSKNQRKNKKPK 88
A QN LGQ K T+ + +N + K+K K
Sbjct: 752 APQNSHLGQASEKDTTPSPQNQGLSPEKSKNEK 784
>M.Javanica_Scaff1425g015590 on XP_815234 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1032
Score = 24.3 bits (51), Expect = 4.2, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 56 AKQNFQLGQILSKTTSKTSKNSSKNQRKNKKPK 88
A QN LGQ K T+ + +N + K+K K
Sbjct: 749 APQNRHLGQASEKDTTPSPQNQGLSPEKSKNEK 781
>M.Javanica_Scaff1425g015590 on XP_812850 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1032
Score = 24.3 bits (51), Expect = 4.2, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 56 AKQNFQLGQILSKTTSKTSKNSSKNQRKNKKPK 88
A QN LGQ K T+ + +N + K+K K
Sbjct: 749 APQNRHLGQASEKDTTPSPQNQGLSPEKSKNEK 781
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13407g067264
(85 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 24 1.1
XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.7
XP_654447 Igl1 (Adhesin) [Entamoeba histolytica] 23 4.6
XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.5
>M.Javanica_Scaff13407g067264 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 24.3 bits (51), Expect = 1.1, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 8 KKIFGEDYNDDVVPASQGYGHHDQYLS 34
KK+ G N+ V +GY ++QYL+
Sbjct: 415 KKVLGTSGNNHQVCKMRGYDQYEQYLN 441
>M.Javanica_Scaff13407g067264 on XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2275
Score = 23.9 bits (50), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 9/14 (64%), Positives = 13/14 (92%)
Query: 4 EEMYKKIFGEDYND 17
E++Y+KIFG+D ND
Sbjct: 1195 EQVYEKIFGKDNND 1208
>M.Javanica_Scaff13407g067264 on XP_654447 Igl1 (Adhesin) [Entamoeba histolytica]
Length = 1101
Score = 22.7 bits (47), Expect = 4.6, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 8 KKIFGEDYNDDVVPASQGYGHHDQYLS 34
K + G N+ V +GY ++QYL+
Sbjct: 415 KSVLGTSGNNHQVCKMRGYDQYEQYLN 441
>M.Javanica_Scaff13407g067264 on XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2277
Score = 21.6 bits (44), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 3 LEEMYKKIFGEDYND 17
LE KKIFG+ YN+
Sbjct: 217 LESKLKKIFGDIYNE 231
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13562g067655
(382 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14181g069251
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845141 VSG (Establishment) [Trypanosoma brucei] 25 0.76
XP_804432 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.8
>M.Javanica_Scaff14181g069251 on XP_845141 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 25.4 bits (54), Expect = 0.76, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 57 IADRQERTAQKE---RHSETGTHHTTGGTSLGIN 87
++D ++ AQKE + S+TG +TTG S IN
Sbjct: 442 LSDEEKEAAQKEGGEKDSKTGNTNTTGSNSFVIN 475
>M.Javanica_Scaff14181g069251 on XP_804432 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 22.3 bits (46), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 12 LQVFHPAPTPHQPNEGASSSRTNAVL 37
+ +F P T PN G +SSR N+ +
Sbjct: 99 VDLFVPNQTLVLPNNGTNSSRRNSFV 124
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15352g072133
(294 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818963 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.1
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 26 4.3
XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.3
XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.8
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.2
>M.Javanica_Scaff15352g072133 on XP_818963 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1055
Score = 25.8 bits (55), Expect = 4.1, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 24/61 (39%)
Query: 160 MPPESVPPPRHSSFSALNDFQKRGETPKNNNNNIIASTSQQQPQTPLQYSQQTDQQQRHR 219
+PP +V S SA+ P+NN TSQQ + S Q D + R
Sbjct: 780 VPPSTVAGGSSVSESAIAAQSAENSLPENNAQFHQGETSQQTTPHEAKESMQRDSDVQPR 839
Query: 220 E 220
E
Sbjct: 840 E 840
>M.Javanica_Scaff15352g072133 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 25.8 bits (55), Expect = 4.3, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 25/64 (39%)
Query: 57 PGCSTPIPPMASPERMDAAVVIPHPPPILPPPHPHQHLTQSKNNAFTLPLMDEERQKESS 116
P + P P A ER +P PP P Q+ ++K P+ D + +
Sbjct: 1677 PAQTAPKKPAADSERQTPEEKLPPPPAAKEEKPPKQNAEKTKPKRSPRPIDDLTPALKKA 1736
Query: 117 FLSN 120
LS+
Sbjct: 1737 MLSS 1740
>M.Javanica_Scaff15352g072133 on XP_806989 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 922
Score = 25.4 bits (54), Expect = 5.3, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
Query: 184 ETPKNNNNNIIASTSQQQPQTPLQYSQQTDQQQRHREQRRAMYSQNKVQYWQQFSQ---- 239
E ++ N +A+ QQ T SQ + Q E A Q F+
Sbjct: 718 EPSRHPANVPVATPEAQQDATSAPRSQHSPAQTSESESGPAESKQTSSDIIDPFTSAGVG 777
Query: 240 MSIQDSGVHSMS-----HSTAPSVMSSIHPASCMSN 270
M+ +DS + + H T+P V+ S+H +N
Sbjct: 778 MAEEDSTWNVNTDDRAPHGTSPDVLESVHDEPSTAN 813
>M.Javanica_Scaff15352g072133 on XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1325
Score = 25.0 bits (53), Expect = 5.8, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 43 TSFPSSHNYYYSSLPGCSTPIPPMASPERMDAAVVIPHPPPILPPPH 89
TS ++N+ Y ++PG + P PE+ A P P+ P+
Sbjct: 443 TSHCGNYNFNYDNIPGSNRPNAFEIPPEKFKKACKCKIPNPLEKCPN 489
>M.Javanica_Scaff15352g072133 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 25.0 bits (53), Expect = 7.2, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 26/58 (44%)
Query: 178 DFQKRGETPKNNNNNIIASTSQQQPQTPLQYSQQTDQQQRHREQRRAMYSQNKVQYWQ 235
D K KN + ++ + + P+ + ++ ++H E R+ + N+ + W+
Sbjct: 975 DLWKANSGKKNTQDKLVKIFQKIKDNLPVNIKGKYNEDEKHLELRKDWWFANRDKVWE 1032
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1324g014767
(209 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.66
XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.3
>M.Javanica_Scaff1324g014767 on XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2287
Score = 27.3 bits (59), Expect = 0.66, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 28 KALKICNFAKEEFLWATLAGLALAEKSFTIAEICYGQLKEAEKLVPLAELRSQPN 82
+ L +CN E+ + + +K+ +AE+CY E + LV + QPN
Sbjct: 125 RRLHVCNKNMEK-----MDSTKIKDKNVLLAEVCYAAKYEGKSLVEKYKEYKQPN 174
>M.Javanica_Scaff1324g014767 on XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2241
Score = 24.3 bits (51), Expect = 7.3, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 49 ALAEKSFTIAEICYGQLKEAEKLVP 73
+L K+ + ++CY EAE L+P
Sbjct: 143 SLKAKNDLLVDVCYAAKYEAESLIP 167
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1445g015769
(83 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABA06457 MSA-2c (Invasion) [Babesia bovis] 23 4.0
ABA06456 MSA-2c (Invasion) [Babesia bovis] 22 4.4
ABA06459 MSA-2c (Invasion) [Babesia bovis] 22 4.4
ABA06472 MSA-2a2 (Invasion) [Babesia bovis] 22 4.4
ABA06460 MSA-2c (Invasion) [Babesia bovis] 22 4.5
ABA06463 MSA-2c (Invasion) [Babesia bovis] 22 4.8
ABA06475 MSA-2a1 (Invasion) [Babesia bovis] 22 4.8
XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.9
XP_811687 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.0
>M.Javanica_Scaff1445g015769 on ABA06457 MSA-2c (Invasion) [Babesia bovis]
Length = 265
Score = 22.7 bits (47), Expect = 4.0, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 5 ISFTFLLLLIGSFLIDAQFISNAEKQSGTPTIYASH 40
+SF + + + S L++A S EK + Y SH
Sbjct: 2 VSFNIITVALCSTLLNATLASPQEKNVPSKHAYGSH 37
>M.Javanica_Scaff1445g015769 on ABA06456 MSA-2c (Invasion) [Babesia bovis]
Length = 265
Score = 22.3 bits (46), Expect = 4.4, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 5 ISFTFLLLLIGSFLIDAQFISNAEKQSGTPTIYASH 40
+SF + + + S L++A S EK + Y SH
Sbjct: 2 VSFNIITVALCSTLLNATLASPQEKNVPSKHAYGSH 37
>M.Javanica_Scaff1445g015769 on ABA06459 MSA-2c (Invasion) [Babesia bovis]
Length = 265
Score = 22.3 bits (46), Expect = 4.4, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 5 ISFTFLLLLIGSFLIDAQFISNAEKQSGTPTIYASH 40
+SF + + + S L++A S EK + Y SH
Sbjct: 2 VSFNIITVALCSTLLNATLASPQEKNVPSKHAYGSH 37
>M.Javanica_Scaff1445g015769 on ABA06472 MSA-2a2 (Invasion) [Babesia bovis]
Length = 265
Score = 22.3 bits (46), Expect = 4.4, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 5 ISFTFLLLLIGSFLIDAQFISNAEKQSGTPTIYASH 40
+SF + + + S L++A S EK + Y SH
Sbjct: 2 VSFNIITVALCSTLLNATLASPQEKNVPSKHAYGSH 37
>M.Javanica_Scaff1445g015769 on ABA06460 MSA-2c (Invasion) [Babesia bovis]
Length = 265
Score = 22.3 bits (46), Expect = 4.5, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 5 ISFTFLLLLIGSFLIDAQFISNAEKQSGTPTIYASH 40
+SF + + + S L++A S EK + Y SH
Sbjct: 2 VSFNIITVALCSTLLNATLASPQEKNVPSKHAYGSH 37
>M.Javanica_Scaff1445g015769 on ABA06463 MSA-2c (Invasion) [Babesia bovis]
Length = 265
Score = 22.3 bits (46), Expect = 4.8, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 5 ISFTFLLLLIGSFLIDAQFISNAEKQSGTPTIYASH 40
+SF + + + S L++A S EK + Y SH
Sbjct: 2 VSFNIITVALCSTLLNATLASPQEKNVPSKHAYGSH 37
>M.Javanica_Scaff1445g015769 on ABA06475 MSA-2a1 (Invasion) [Babesia bovis]
Length = 265
Score = 22.3 bits (46), Expect = 4.8, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 5 ISFTFLLLLIGSFLIDAQFISNAEKQSGTPTIYASH 40
+SF + + + S L++A S EK + Y SH
Sbjct: 2 VSFNIITVALCSTLLNATLASPQEKNVPSKHAYGSH 37
>M.Javanica_Scaff1445g015769 on XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 22.3 bits (46), Expect = 4.9, Method: Composition-based stats.
Identities = 5/17 (29%), Positives = 12/17 (70%)
Query: 39 SHKEHVGNWNPVRRRRN 55
+HK+H W+P ++++
Sbjct: 639 THKKHSSTWDPETKKKD 655
>M.Javanica_Scaff1445g015769 on XP_811687 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 722
Score = 21.9 bits (45), Expect = 8.0, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 45 GNWNPVRRRRNFLSQTQPASKTPPSYATHSEAVGNWNPK 83
GN + ++RR ++ S S+ +T + NW K
Sbjct: 445 GNLHLLQRRGDYESSVMSLSRLTEELSTIKSVLSNWAKK 483
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff155g002728
(245 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 32 0.046
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 27 1.2
XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica] 25 4.4
XP_655415 Hgl (Adhesin) [Entamoeba histolytica] 25 4.4
>M.Javanica_Scaff155g002728 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 31.6 bits (70), Expect = 0.046, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 63 EFELEEIKQRKEKRNISTTIEVYIESVDEIEGKIRSQTWTLYPNPGSSGT--DNFYDFSK 120
+F+ E++++ KEK I I ++ + IE ++ Q +GT D DF +
Sbjct: 1805 KFKKEKVREIKEKDEIDGKISLFGQDDTSIEENLQKQL--------KNGTIPD---DFKR 1853
Query: 121 VHLFNFGQYKPV--GNSLYLD---IQTNYGAFVNN 150
+ FG YK + G + +D ++TN G NN
Sbjct: 1854 QMFYTFGDYKDILFGKYIGIDMGTVKTNIGRVFNN 1888
>M.Javanica_Scaff155g002728 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 26.9 bits (58), Expect = 1.2, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 40/108 (37%), Gaps = 10/108 (9%)
Query: 126 FGQYKPVGNSLYLDIQTNYGAFVNNMLALAKKANNNAEITKQGCRGYKKFSGTGFGYRVG 185
+GQ PV YL L +K N + GC+G SG G R G
Sbjct: 952 YGQLSPVMAGTYLSWLVYLIGEFQGGLGELRKELMNVDCKGDGCQGQAGGSGCGNDCRSG 1011
Query: 186 AFSFRVTGFGLAKISGTGFGFRVIKFSFRVSGFG-LAKISGTGFGFGE 232
+ +G G A V K + VS G L + GFG+G+
Sbjct: 1012 SHGTTCSGAGSAG---------VCKCTSVVSCTGVLPVLYKYGFGYGD 1050
>M.Javanica_Scaff155g002728 on XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica]
Length = 1286
Score = 25.4 bits (54), Expect = 4.4, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 31 TEYSWKVSVTSEGFHVTNPEQVQSFIGQSSYIE 63
T Y+ K SE F P Q + F Q SY++
Sbjct: 1137 TIYTKKTCTVSEEFPTITPNQGRCFYCQCSYLD 1169
>M.Javanica_Scaff155g002728 on XP_655415 Hgl (Adhesin) [Entamoeba histolytica]
Length = 1291
Score = 25.4 bits (54), Expect = 4.4, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 31 TEYSWKVSVTSEGFHVTNPEQVQSFIGQSSYIE 63
T Y+ K SE F P Q + F Q SY++
Sbjct: 1142 TIYTKKTCTVSEEFPTITPNQGRCFYCQCSYLD 1174
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13489g067473
(130 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_813740 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.6
XP_001352240 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.6
XP_814225 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.7
XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.7
>M.Javanica_Scaff13489g067473 on XP_813740 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 717
Score = 23.9 bits (50), Expect = 3.6, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 9/39 (23%)
Query: 80 ISMQEWNN---------SGAGNIYKIFNTSKTWEEAKNT 109
IS+ EW+ +G +Y+ + +TW EA T
Sbjct: 313 ISITEWDKGQILMVAECAGGRKVYESLDMGRTWTEAVGT 351
>M.Javanica_Scaff13489g067473 on XP_001352240 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1315
Score = 23.5 bits (49), Expect = 5.6, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 22/100 (22%)
Query: 26 GCNCQYPNNHYVPWYLSGNVENRLTFLERQTSQKINMLIARIEALERELGLIHRISMQEW 85
C C+ PN LE+ +++ + R + + L + + EW
Sbjct: 465 ACKCKIPNP-----------------LEKCPNEENKNVCTRFDKVYSCTSLSFKNDLSEW 507
Query: 86 NNSGAGNIYKIFNTSKTWEEAKNTCMTFGARLASIDSDYK 125
NNSG N N +N C+ ++ DYK
Sbjct: 508 NNSGVKNKENDNNGVLVPPRRRNLCINLFSK-----KDYK 542
>M.Javanica_Scaff13489g067473 on XP_814225 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 717
Score = 23.5 bits (49), Expect = 5.7, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 9/39 (23%)
Query: 80 ISMQEWNNS---------GAGNIYKIFNTSKTWEEAKNT 109
IS+ EW+ G +Y+ + +TW EA T
Sbjct: 313 ISITEWDKGQILMVAECLGGRKVYESLDMGRTWTEAVGT 351
>M.Javanica_Scaff13489g067473 on XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1325
Score = 23.5 bits (49), Expect = 5.7, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 22/100 (22%)
Query: 26 GCNCQYPNNHYVPWYLSGNVENRLTFLERQTSQKINMLIARIEALERELGLIHRISMQEW 85
C C+ PN LE+ +++ + R + + L + + EW
Sbjct: 475 ACKCKIPNP-----------------LEKCPNEENKNVCTRFDKVSSCTSLFFKNDLIEW 517
Query: 86 NNSGAGNIYKIFNTSKTWEEAKNTCMTFGARLASIDSDYK 125
NNSG N N +N C+ ++ DYK
Sbjct: 518 NNSGVKNKENDNNGVLVPPRRRNLCINLFSK-----KDYK 552
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14938g071139
(150 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.3
XP_001610568 variant erythrocyte surface antigen-1, alpha subun... 23 6.6
>M.Javanica_Scaff14938g071139 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 25.0 bits (53), Expect = 2.3, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 12/73 (16%)
Query: 50 NGNEELINLKVECSPTSLRENKAASIIQAWWRGLRYRKFMLQEH---KEKLKCCVLQLRE 106
NGN +++N K P EN+ II+A ++ R+ ++ L+++ ++KLK C+
Sbjct: 1631 NGNGKIVNGK----PNG--ENQII-IIRALFK--RWLEYFLEDYNKIRKKLKPCMNNSDG 1681
Query: 107 APCSEENPKEERC 119
+PC + K+ +C
Sbjct: 1682 SPCIDNYKKKYQC 1694
>M.Javanica_Scaff14938g071139 on XP_001610568 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1329
Score = 23.5 bits (49), Expect = 6.6, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 111 EENPKEERCEPLKQRILRYLNGLLSTV 137
E N E+ P K R+ LNGL S V
Sbjct: 71 ESNGAEKNNGPPKGRVTECLNGLFSLV 97
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14660g070428
(432 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 40 2e-04
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 36 0.005
XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum] 30 0.35
XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.38
XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.50
XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.2
XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.0
XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.9
>M.Javanica_Scaff14660g070428 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 40.0 bits (92), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 25/134 (18%)
Query: 25 KAEDEEEDKEGGDDGGGDGDDDKEEGEEEKEEKSGKGEDEEEEGDDEDEEEKNGDKEEDG 84
K E EDK+ + G GD +D KE G+ E +++SG ED++ GD ED++E +GD E
Sbjct: 756 KMIKEVEDKK--EKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDSEDKKE-SGDSE--- 809
Query: 85 EDEEEKNGDKEEDGEDEEDKEGNDD-------EDGDKEKGEEEDDDEAQSKSGKSKSVKK 137
DK+E G D EDK+G+ D + EEE + QS SG + S+
Sbjct: 810 --------DKKESG-DSEDKKGSGDGAFTPAVSNATTHTAEEETVN--QSASG-TFSITD 857
Query: 138 RKRGDKDNEEESEN 151
GD ++E E
Sbjct: 858 STEGDVSSDENGET 871
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 37/115 (32%)
Query: 48 EEGEEEKEEKSGKGEDEEEEGDDEDEEEKNGDKEEDGEDEEEKNGDKEEDGEDEEDKEGN 107
+E E++KE+ SG ED++E GD ED++E D EDK+G+
Sbjct: 759 KEVEDKKEKGSGDSEDKKESGDSEDKKESG----------------------DSEDKKGS 796
Query: 108 DDEDGDKEKGEEEDDDEAQSKSGKSKSVKKRKRGDKDNEEESENDEAESEVDNGS 162
D + KE G+ ED K++ GD ++++ S + V N +
Sbjct: 797 GDSEDKKESGDSED---------------KKESGDSEDKKGSGDGAFTPAVSNAT 836
>M.Javanica_Scaff14660g070428 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 35.8 bits (81), Expect = 0.005, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 48 EEGEEEKEEKSGKGEDEEEEGDDEDEEEKNGDKEEDGEDEEEKNGDKEEDGEDEE----D 103
++ EE K ++ + E E++E ++EE K ++E ++E K ++E ++EE +
Sbjct: 2748 QKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQE 2807
Query: 104 KEGNDDEDGDKEKGEEEDDDEAQSKSGKSKSVKKRKRGDKDNEEESENDEAE 155
+E + E ++ + EEE + Q + K +++K++++ EEE + E E
Sbjct: 2808 QERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQE 2859
Score = 28.5 bits (62), Expect = 0.94, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 54 KEEKSGKGEDEEEEGDDEDEEEKNGDKEEDGEDEEEKNGDKE----EDGEDEEDKEGNDD 109
K ++ + + EEE E E + +E+ ++EE K ++E E+ +++E
Sbjct: 2740 KRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQK 2799
Query: 110 EDGDKEKGEEEDDDEAQSKSGKSKSVKKRKRGDKDNEEESENDEAE 155
E+ K + +E + E Q + K + +K++++ EE + E E
Sbjct: 2800 EEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQE 2845
Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Query: 46 DKEEGEEEKEEKSGKGED---------EEEEGDDEDEEEKNGDKEEDGEDEEEK-NGDKE 95
++E E EK+E+ K E+ ++EE E+E+ +EE E+E+ +K+
Sbjct: 2757 EQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQ 2816
Query: 96 EDGEDEEDKEGNDDEDGDKEKGEEEDDDEAQSKSGKSKSVKKRKRGDKDNEEESENDEAE 155
E + EE+ + + E KE+ + + E K ++ KR +++ E + + AE
Sbjct: 2817 EQLQKEEELKRQEQERLQKEEALKRQEQERLQKE------EELKRQEQERLERKKIELAE 2870
Query: 156 SE 157
E
Sbjct: 2871 RE 2872
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 25 KAEDEEEDKEGGDDGGGDGDDDKEEGEEEKEEKSGKGEDEEEEGDDEDEEEKNGDKEEDG 84
+ E E ++E + + + ++E E ++E++ K +++E + EEE ++E
Sbjct: 2755 RQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERL---QKEEELKRQEQERL 2811
Query: 85 EDEEEKNGDKEEDGEDEEDKEGNDDEDGDKEKGEEEDDDEAQSKSGKSKSVKKRKRGDKD 144
E E+++ KEE+ + +E +E E+ K + +E E + K + + ++++K +
Sbjct: 2812 EREKQEQLQKEEELKRQE-QERLQKEEALKRQEQERLQKEEELKRQEQERLERKKIELAE 2870
Query: 145 NEEESENDEAESEVDNGSDEDGSREHKRAKNR 176
E+ ++ V DE + + KN+
Sbjct: 2871 REQHIKSKLESDMVKIIKDELTKEKDEIIKNK 2902
>M.Javanica_Scaff14660g070428 on XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum]
Length = 2441
Score = 30.0 bits (66), Expect = 0.35, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 71/159 (44%), Gaps = 3/159 (1%)
Query: 27 EDEEEDKEGGDDGGGDGDDDKEEGEEEKEEKSGKGEDEEEEGDDEDEEEKNGDKEEDGED 86
E E D G + ++ EE EE+ K+ + +++ +G E+ E KN + G D
Sbjct: 1033 EYNETDLAKGKEVTNKARENLEEYEEKDYMKNNELQNKGSDGLKENAELKNKELRNKGSD 1092
Query: 87 EEEKNGDKEEDGEDEEDKEGNDDEDGDKEKGEEEDDDEAQSKSGKSKSVKKRKRGDKDNE 146
++N + + E +G+D + E +E ++ ++ +K ++ +K +E
Sbjct: 1093 GLKENAELK---NKELRNKGSDGLKENAELKNKELQNKGSEGLKENAELKNKELQNKGSE 1149
Query: 147 EESENDEAESEVDNGSDEDGSREHKRAKNRRYICQDKDG 185
EN E +++ +G +E+ KN+ + +G
Sbjct: 1150 GLKENAELKNKELRNKGSEGLKENAELKNKELQNKGSEG 1188
Score = 26.6 bits (57), Expect = 3.4, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Query: 51 EEEKEEKSGKGEDEEEEGDDEDEEEKNGDKEEDGEDEEEKNGDKEEDGEDEEDKEGNDDE 110
+E E K+ + +++ EG E+ E KN + + G + ++N + + + EG +
Sbjct: 1114 KENAELKNKELQNKGSEGLKENAELKNKELQNKGSEGLKENAELKNKELRNKGSEGLKEN 1173
Query: 111 DGDKEKGEEEDDDEAQSKSGKSKSVKKRKRGDKDNEEESE--NDEAESEVDNGSDEDGSR 168
K K + E ++ + K+ + + +G + +E +E N E +++ G E+
Sbjct: 1174 AELKNKELQNKGSEGLKENAELKNKELQNKGSEGLKENAELKNKELQNKGSEGLKENAEL 1233
Query: 169 EHKRAKNR 176
++K +N+
Sbjct: 1234 KNKELRNK 1241
Score = 25.8 bits (55), Expect = 6.6, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 27 EDEEEDKEGGDDGGGDGDDD-KEEGEEEKEEKSGKGEDE-EEEGDDEDEEEKNGDKEEDG 84
E EE+D ++ G D KE E + +E KG D +E + +++E +N +
Sbjct: 1055 EYEEKDYMKNNELQNKGSDGLKENAELKNKELRNKGSDGLKENAELKNKELRNKGSDGLK 1114
Query: 85 EDEEEKNGDKEEDGED--EEDKEGNDDEDGDKEKGEEEDDDEAQSKSGKSK--------- 133
E+ E KN + + G + +E+ E + E +K +++ E ++K ++K
Sbjct: 1115 ENAELKNKELQNKGSEGLKENAELKNKELQNKGSEGLKENAELKNKELRNKGSEGLKENA 1174
Query: 134 SVKKRKRGDKDNEEESENDEAESEVDNGSDEDGSREHKRAKNRRYICQDKDG 185
+K ++ +K +E EN E +++ +G +E+ KN+ + +G
Sbjct: 1175 ELKNKELQNKGSEGLKENAELKNKELQNKGSEGLKENAELKNKELQNKGSEG 1226
>M.Javanica_Scaff14660g070428 on XP_803096 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 29.6 bits (65), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 39 GGGDGDDDKEEGEEEKEEKSGKGEDEEEEGDDEDEE 74
G GDG+D K G+ E ++ SG GED++ GD E
Sbjct: 700 GSGDGEDKKGSGDGEDKKGSGDGEDKKRSGDGSMRE 735
>M.Javanica_Scaff14660g070428 on XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 29.3 bits (64), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 41 GDGDDDKEEGEEEKEEKSGKGEDEEEEGDDEDEEE-KNGDKEEDGEDEEEKNGDKEEDGE 99
G GDD K G E ++ G ED++ GD E ++ ++GD ++ D E+K G
Sbjct: 767 GSGDDKKGSGGSEDKKGIGGAEDKKGSGDGEGKKGIRDGDDKKGSGDSEDKKGIG----- 821
Query: 100 DEEDKEGNDD 109
EDK+G+ D
Sbjct: 822 GAEDKKGSGD 831
Score = 28.5 bits (62), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 31 EDKEGGDDGGG-----DGDDDKEEGEEEKEEKSGKGEDEEEEGDDEDEE 74
EDK+G DG G DGDD K G+ E ++ G ED++ GD E
Sbjct: 788 EDKKGSGDGEGKKGIRDGDDKKGSGDSEDKKGIGGAEDKKGSGDGSMRE 836
>M.Javanica_Scaff14660g070428 on XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 759
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 25 KAEDEEEDKEGGDDGGGDGDDDKEEGEEEKEEKSGKGEDEEEEGDDEDEE 74
K E EDK+ + G GD +D KE G+ E +++SG ED++ GD E
Sbjct: 692 KMIKEVEDKK--EKGSGDSEDKKESGDSEDKKESGDSEDKKGSGDGSMRE 739
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 48 EEGEEEKEEKSGKGEDEEEEGDDEDEEEKNGDKE 81
+E E++KE+ SG ED++E GD ED++E +GD E
Sbjct: 695 KEVEDKKEKGSGDSEDKKESGDSEDKKE-SGDSE 727
>M.Javanica_Scaff14660g070428 on XP_818396 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 58/166 (34%), Gaps = 28/166 (16%)
Query: 39 GGGDGDDDKEEGEEE------KEEKSGKGEDEEEEG-DDEDEEEKNGDKEEDGEDEEEKN 91
GG G+D G + K S GED E G D D + GED E
Sbjct: 713 GGSAGEDSDSSGAADTDSAKVKAIGSSAGEDGESSGAADTDSAKVKAIGSSAGEDGESSG 772
Query: 92 G-------DKEEDGEDEEDKEGNDDEDGDKEKGEE---------EDDDEAQSKSGKSKSV 135
K G ED + + D D KG+ E A + S K K++
Sbjct: 773 AADTDSAKGKATGGSAGEDSDSSGAADTDSAKGKATGGSAGEDGESSGAADTDSAKVKAI 832
Query: 136 KKRKRGDKDNEEESENDEAESEVDNG-----SDEDGSREHKRAKNR 176
D D+ ++ D A+ + G SD G+ + AK +
Sbjct: 833 GSSAGEDSDSSGAADTDSAKGKATGGSAGEDSDSSGAADTDSAKGK 878
Score = 26.2 bits (56), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 51/147 (34%), Gaps = 23/147 (15%)
Query: 39 GGGDGDDDKEEGEEEKEEKSGK------GEDEEEEGD-DEDEEEKNGDKEEDGEDEEEKN 91
GG G+D G + + GK GED E G D D + GED +
Sbjct: 785 GGSAGEDSDSSGAADTDSAKGKATGGSAGEDGESSGAADTDSAKVKAIGSSAGEDSDSSG 844
Query: 92 G-------DKEEDGEDEEDKEGNDDEDGDKEKGEE---------EDDDEAQSKSGKSKSV 135
K G ED + + D D KG+ E A + S K K+
Sbjct: 845 AADTDSAKGKATGGSAGEDSDSSGAADTDSAKGKATGSSAGEDGESSGAADTDSAKGKAT 904
Query: 136 KKRKRGDKDNEEESENDEAESEVDNGS 162
D D+ ++ D A+ + GS
Sbjct: 905 GGSAGEDSDSSGAADTDSAKGKATGGS 931
>M.Javanica_Scaff14660g070428 on XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1048
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 56 EKSGKGEDEEEEGDDEDEEEKNGDKEEDGEDEEEKNGDKEEDGEDEEDKEGNDDEDGDKE 115
E +G E+ E E + E E + + + +D + EE E ND E +
Sbjct: 791 ESAGNSRSEDNAQLSEGETSQQATPHEGSESMQRDSDVQTQDLQSEESTEFNDVEGSSES 850
Query: 116 --KGEEEDDDEAQSKSGKSKS 134
+ E+D EA +SGKS S
Sbjct: 851 YDTPQPEEDGEANDRSGKSTS 871
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15924g073450
(57 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15081g071498
(188 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819737 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.0
>M.Javanica_Scaff15081g071498 on XP_819737 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1112
Score = 26.6 bits (57), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Query: 110 GHFTQMLWRDTNRIGIGVSIIPQ----PAGWGCMPPGRGQAW 147
G+ TQ WRD +G+ ++ P GW PG G W
Sbjct: 575 GNSTQTEWRD-EYLGVNATVTNGEKRVPNGWTFQGPGAGAVW 615
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15423g072287
(126 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.083
XP_001609033 variant erythrocyte surface antigen-1, alpha subun... 26 0.89
XP_845069 VSG (Establishment) [Trypanosoma brucei] 24 2.7
>M.Javanica_Scaff15423g072287 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 28.9 bits (63), Expect = 0.083, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 17 QHQGVEKALRKLKE-SVDRFEFNFHKAVLEEYGQIGMVKSALEERAERHFNLLDQTNIDF 75
Q K + KLK+ S ++ NF+ + ++YG I + L+E + +N ++ IDF
Sbjct: 399 QKNKYTKEIEKLKDNSKSNYDKNFYLTLTKKYGSINLFLDTLKEGSHCSYNTIED-KIDF 457
Query: 76 PAA 78
A
Sbjct: 458 NKA 460
>M.Javanica_Scaff15423g072287 on XP_001609033 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1270
Score = 25.8 bits (55), Expect = 0.89, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 16 GQHQGVEKALRKLKESVDRFEFNFHKAVLEEYG----QIGMVKSALEERAE 62
G+ + V+ L +KE D KA+LE G Q+G + ALE++AE
Sbjct: 607 GRVEKVKDGLDGVKEGADSVAAKV-KALLEAIGEVVVQLGNAQEALEKKAE 656
>M.Javanica_Scaff15423g072287 on XP_845069 VSG (Establishment) [Trypanosoma brucei]
Length = 477
Score = 24.3 bits (51), Expect = 2.7, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 56 ALEERAERHFNLLDQTNIDFPAAVIQTEKRIENFFALKVGALKRLEIL 103
A++E A R L +T P A+ Q K IE + L+RLE++
Sbjct: 27 AIKETAIREVCELSKTLKGTPFAITQRWKHIEALISTFERLLRRLELI 74
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15503g072503
(74 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827706 VSG (Establishment) [Trypanosoma brucei] 26 0.23
XP_817615 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.3
XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_820393 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.7
XP_821703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.2
>M.Javanica_Scaff15503g072503 on XP_827706 VSG (Establishment) [Trypanosoma brucei]
Length = 475
Score = 25.8 bits (55), Expect = 0.23, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 19 QMRGQKNTHTPHTLTDKTRTDTTDKTR--TDTDRQNTDEDRQITDGHGQTK 67
Q R +++ T +++ + T D +D T+ TDT+R+ E + I+ G+G +K
Sbjct: 378 QGRQKRSVDTENSVPE-TPADPSDPTQSTTDTNRKKQGERKPISTGNGASK 427
>M.Javanica_Scaff15503g072503 on XP_817615 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 860
Score = 23.1 bits (48), Expect = 2.3, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 8/61 (13%)
Query: 14 CPWHNQMRGQKNTHTPHT-LTDKTRTDTTDKTRTDTDRQNTDEDRQITDGHGQTKHGRRR 72
C + + Q++TH PHT + +R RT R++T G+ + GR
Sbjct: 43 CEIRSLWKDQQHTHRPHTHIYMLSRVAAVKAPRTHN-------RRRVTGSSGRRREGRES 95
Query: 73 Q 73
+
Sbjct: 96 E 96
>M.Javanica_Scaff15503g072503 on XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 22.7 bits (47), Expect = 3.0, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 9/60 (15%)
Query: 16 WHNQ-MRGQKNTHTPHT-LTDKTRTDTTDKTRTDTDRQNTDEDRQITDGHGQTKHGRRRQ 73
W+++ ++G HTP T + +R RT R+ +T HG+ + GR +
Sbjct: 14 WNSKALKGPTTAHTPPTHICMLSRVAAVKAPRTHNRRR-------VTGSHGRRREGRESE 66
>M.Javanica_Scaff15503g072503 on XP_820393 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 22.3 bits (46), Expect = 3.7, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 8/61 (13%)
Query: 14 CPWHNQMRGQKNTHTPHT-LTDKTRTDTTDKTRTDTDRQNTDEDRQITDGHGQTKHGRRR 72
C + Q++TH PHT + +R RT R++T G+ + GR
Sbjct: 41 CEIRRHQKDQQHTHRPHTHICMLSRVAAVMAPRTHN-------RRRVTGSSGRRREGRES 93
Query: 73 Q 73
+
Sbjct: 94 E 94
>M.Javanica_Scaff15503g072503 on XP_821703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 21.9 bits (45), Expect = 5.2, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 8/61 (13%)
Query: 14 CPWHNQMRGQKNTHTPHT-LTDKTRTDTTDKTRTDTDRQNTDEDRQITDGHGQTKHGRRR 72
C + Q++TH PHT + +R RT R +T G+ + GR
Sbjct: 41 CEIRRHQKDQQHTHRPHTHICMLSRVAAVKAPRTHN-------RRGVTGSSGRRREGRES 93
Query: 73 Q 73
+
Sbjct: 94 E 94
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1432g015645
(267 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 32 0.041
>M.Javanica_Scaff1432g015645 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 32.0 bits (71), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 182 LKCNFTKFNVWFKNADVFAKVIDLKDLFSSETFRQMKNIILGEIMDEKTFEECAFYYNSL 241
++ NF K+ F N + + + D K+ + + +KN+ + KT E+ Y+N L
Sbjct: 2072 IQYNFEKYKEIFDNVEEYKTLDDTKNAYIVKKAEILKNVDIN-----KTKEDLDIYFNDL 2126
Query: 242 DEAKKDLNLA 251
DE +K L L+
Sbjct: 2127 DELEKSLTLS 2136
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14390g069777
(52 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804884 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 0.97
>M.Javanica_Scaff14390g069777 on XP_804884 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 732
Score = 23.1 bits (48), Expect = 0.97, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 29 IFCRATPDLPSSFWFCRTPPPP 50
+FC A P L W C P P
Sbjct: 43 LFCSAVPLLLVVMWMCCDPCGP 64
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14023g068851
(51 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_809825 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.3
XP_812311 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.5
>M.Javanica_Scaff14023g068851 on XP_809825 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 21.9 bits (45), Expect = 2.3, Method: Composition-based stats.
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 35 FVASVIGTCSVENFPET 51
V+ G C ++NFP T
Sbjct: 655 LVSFCFGACGIQNFPVT 671
>M.Javanica_Scaff14023g068851 on XP_812311 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 21.9 bits (45), Expect = 2.5, Method: Composition-based stats.
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 33 ANFVASVIGTCSVENFPE 50
AN+ +++ T S++N PE
Sbjct: 571 ANYNFTLVATVSIDNVPE 588
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15260g071924
(127 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.85
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.2
XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.3
XP_818892 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.0
XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.0
XP_844689 VSG (Establishment) [Trypanosoma brucei] 24 3.4
>M.Javanica_Scaff15260g071924 on XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 25.8 bits (55), Expect = 0.85, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 3 QNHENQSMLITGESGAGKTENTKKVIAYFASVGASQAQN--AGGA 45
Q+ E + + I+ ++G G N+ K +SVG+ A+ +GG+
Sbjct: 774 QDTEEKLLKISNDAGGGGASNSAKTTVTTSSVGSQSAEQLASGGS 818
>M.Javanica_Scaff15260g071924 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 24.6 bits (52), Expect = 2.2, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 48 PTLEDQIVQTNPVLEAFGNAKTVRNNNSSRF 78
PT ED +V NPV GN V NN + F
Sbjct: 2140 PTNEDNVVDCNPV----GNNIYVDNNPNQTF 2166
>M.Javanica_Scaff15260g071924 on XP_814219 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 958
Score = 24.6 bits (52), Expect = 2.3, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 3 QNHENQSMLITGESGAGKTENTKKVIAYFASVGASQAQN--AGGA 45
Q+ E + + I+ ++G G N+ K SVG+ A+ +GG+
Sbjct: 778 QDTEEKLLKISNDAGGGGASNSAKTTMTTHSVGSQSAEQLASGGS 822
>M.Javanica_Scaff15260g071924 on XP_818892 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 24.3 bits (51), Expect = 3.0, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 3 QNHENQSMLITGESGAGKTENTKKVIAYFASVGASQAQN--AGGA 45
Q+ E + + I+ ++G G N+ K SVG A+ +GG+
Sbjct: 776 QDTEEKLLKISNDAGGGGASNSAKTTMTTHSVGGQSAEQLASGGS 820
>M.Javanica_Scaff15260g071924 on XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 24.3 bits (51), Expect = 3.0, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 3 QNHENQSMLITGESGAGKTENTKKVIAYFASVGASQAQN--AGGA 45
Q+ E + + I+ ++G G N+ K SVG A+ +GG+
Sbjct: 776 QDTEEKLLKISNDAGGGGASNSAKTTMTTHSVGGQSAEQLASGGS 820
>M.Javanica_Scaff15260g071924 on XP_844689 VSG (Establishment) [Trypanosoma brucei]
Length = 509
Score = 23.9 bits (50), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 8 QSMLITGESGAGKTENTKKVIA 29
Q+M + G+SGAG+ N + VI+
Sbjct: 140 QAMRVKGQSGAGQVTNRQGVIS 161
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1599g016950
(249 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845141 VSG (Establishment) [Trypanosoma brucei] 28 0.33
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.5
AAM45255 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 26 2.6
AAM45253 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 26 2.6
AAL23761 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 26 2.8
AAM45250 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 26 2.8
AAM45258 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 26 2.9
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 26 3.3
AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 25 5.2
XP_818403 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 9.2
>M.Javanica_Scaff1599g016950 on XP_845141 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 28.5 bits (62), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 104 QQLQEQVKKLQEQINKSQQGKSSFEQFAQMLSLADGLDCN--CSGHSTPWTGWPST 157
QQ+ +QV KLQ Q + QQ S EQ L D N C+ T G T
Sbjct: 386 QQMADQVAKLQAQATEKQQDVKSAEQTCNDLKEKSDCDTNNRCTYDKTKEDGKKCT 441
>M.Javanica_Scaff1599g016950 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 26.6 bits (57), Expect = 1.5, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 9/56 (16%)
Query: 74 FDFLCKCQAKSSLIKSSTPSSGDLSTQQQVQQLQEQVKKLQEQINKSQQGKSSFEQ 129
FD C C A I SS +G+ ++ +KKL+E+ NK ++ SS EQ
Sbjct: 1583 FDQSCGCSA----IASSQKKNGEYK-----DAIECMLKKLEEKANKCKEDHSSGEQ 1629
>M.Javanica_Scaff1599g016950 on AAM45255 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 25.8 bits (55), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 53 NFGNSFGGGNNLLNNGD---NTVNFDFLCKCQAKSSLIKS--STPSSGDLSTQQQV 103
NF N NN + D N +D LC C+ +++IKS + P+ D+ Q+
Sbjct: 251 NFLNDLFKKNNKNDLDDFFKNEKEYDDLCDCRYTATIIKSFLNGPAKNDVDIASQI 306
>M.Javanica_Scaff1599g016950 on AAM45253 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 25.8 bits (55), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 53 NFGNSFGGGNNLLNNGD---NTVNFDFLCKCQAKSSLIKS--STPSSGDLSTQQQV 103
NF N NN + D N +D LC C+ +++IKS + P+ D+ Q+
Sbjct: 251 NFLNDLFKKNNKNDLDDFFKNEKEYDDLCDCRYTATIIKSFLNGPAKNDVDIASQI 306
>M.Javanica_Scaff1599g016950 on AAL23761 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 25.8 bits (55), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 53 NFGNSFGGGNNLLNNGD---NTVNFDFLCKCQAKSSLIKS--STPSSGDLSTQQQV 103
NF N NN + D N +D LC C+ +++IKS + P+ D+ Q+
Sbjct: 251 NFLNDLFKKNNKNDLDDFFKNEKEYDDLCDCRYTATIIKSFLNGPAKNDVDIASQI 306
>M.Javanica_Scaff1599g016950 on AAM45250 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 25.8 bits (55), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 53 NFGNSFGGGNNLLNNGD---NTVNFDFLCKCQAKSSLIKS--STPSSGDLSTQQQV 103
NF N NN + D N +D LC C+ +++IKS + P+ D+ Q+
Sbjct: 251 NFLNDLFKKNNKNDLDDFFKNEKEYDDLCDCRYTATIIKSFLNGPAKNDVDIASQI 306
>M.Javanica_Scaff1599g016950 on AAM45258 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 25.8 bits (55), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 53 NFGNSFGGGNNLLNNGD---NTVNFDFLCKCQAKSSLIKS--STPSSGDLSTQQQV 103
NF N NN + D N +D LC C+ +++IKS + P+ D+ Q+
Sbjct: 251 NFLNDLFKKNNKNDLDDFFKNEKEYDDLCDCRYTATIIKSFLNGPAKNDVDIASQI 306
>M.Javanica_Scaff1599g016950 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 25.8 bits (55), Expect = 3.3, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 81 QAKSSLIKSSTPSSGDLSTQQQVQQLQEQVKKLQEQINKSQQGKS 125
QAK++ +++ P QQ+ E K+LQ++IN+S +S
Sbjct: 1188 QAKTAFARTAFPDD-----DPDYQQVVEFFKELQKEINRSASQRS 1227
>M.Javanica_Scaff1599g016950 on AAK49521 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 1210
Score = 25.0 bits (53), Expect = 5.2, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 53 NFGNSFGGGNNLLNNGD---NTVNFDFLCKCQAKSSLIKS--STPSSGDLSTQQQV 103
NF N NN + D N +D LC C+ +++IKS + P+ D+ Q+
Sbjct: 391 NFLNDLFKKNNKNDLDDFFKNEKEYDDLCDCRYTATIIKSFLNGPAKNDVDIASQI 446
>M.Javanica_Scaff1599g016950 on XP_818403 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 24.3 bits (51), Expect = 9.2, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 45 PIYRQQAVNFGNSFGGGNNLLNNGDNTVNFDFLCKCQAKSSLIKSSTPSSGDLSTQQQVQ 104
P+Y ++AV GN G + L + + V+ + A +S + + SGD +++
Sbjct: 400 PVYSEEAVTGGNGKGKLHLWLTDNTHIVDIGPVSDDDAAASSLLYKSGKSGDNKEEEKFI 459
Query: 105 QLQEQ 109
L E+
Sbjct: 460 ALYEK 464
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15064g071456
(166 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803305 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.5
XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum] 24 4.8
XP_001348165 RESA (Others) [plasmodium falciparum] 24 5.7
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 23 8.8
>M.Javanica_Scaff15064g071456 on XP_803305 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 259
Score = 24.3 bits (51), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 43 CVVCGDAACNHHYYGVPACHGCKCFFWRSI 72
C GDAA P C + F WR+
Sbjct: 59 CGTGGDAAAEELPQSCPGCSSGRLFVWRNT 88
>M.Javanica_Scaff15064g071456 on XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum]
Length = 2441
Score = 24.3 bits (51), Expect = 4.8, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Query: 116 MPKKSSEVEEDLAKM---EKEICKE 137
+PKK VE+DL +M EKE K+
Sbjct: 202 VPKKPESVEKDLKEMELKEKEFIKQ 226
>M.Javanica_Scaff15064g071456 on XP_001348165 RESA (Others) [plasmodium falciparum]
Length = 1085
Score = 23.9 bits (50), Expect = 5.7, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 69 WRSIKNKMKYICRADGHCDIN 89
W+++ N+++Y CR + DI+
Sbjct: 283 WKALSNQIQYSCRKIMNSDIS 303
>M.Javanica_Scaff15064g071456 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 23.5 bits (49), Expect = 8.8, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 10/41 (24%)
Query: 80 CRADGHCDINPNYRNACRY----------CRLQRCLKAGMQ 110
C +G C+ NP+ + C Y C CLK G +
Sbjct: 130 CDGNGECNGNPHGKGKCEYLKDLTPNDMSCGKCGCLKVGAE 170
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14978g071241
(162 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAB65410 AMA1 (Invasion) [Toxoplasma gondii] 25 1.4
ABA06441 MSA-2a/b (Invasion) [Babesia bovis] 23 9.4
>M.Javanica_Scaff14978g071241 on AAB65410 AMA1 (Invasion) [Toxoplasma gondii]
Length = 255
Score = 25.4 bits (54), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 11/30 (36%)
Query: 127 NNFLRFGRGAEDIPSEAEAFEREYRQSNNP 156
NNFL ED+P+E +EY+QS NP
Sbjct: 108 NNFL------EDVPTE-----KEYKQSGNP 126
>M.Javanica_Scaff14978g071241 on ABA06441 MSA-2a/b (Invasion) [Babesia bovis]
Length = 278
Score = 23.1 bits (48), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 45 NSWSDADPNFLRFGRSAASNEEGIKRAAG 73
N + D++ F+R + + EE +K+A G
Sbjct: 174 NDFLDSESPFMRIYKDLNTYEELVKKAPG 202
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1598g016940
(94 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK07772 MSA-1 (Invasion) [Babesia bovis] 24 2.1
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 22 7.2
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 22 8.0
>M.Javanica_Scaff1598g016940 on AAK07772 MSA-1 (Invasion) [Babesia bovis]
Length = 339
Score = 23.9 bits (50), Expect = 2.1, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Query: 64 EEVDN-----LKLKDCLKEYHVLTGYEFKRTI 90
++VDN K+KD +K H+++ +FK T+
Sbjct: 86 QQVDNTFTYLYKVKDMIKNNHMISPEQFKETL 117
>M.Javanica_Scaff1598g016940 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 22.3 bits (46), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 25 SIYEHFLIIECISLSYSNPEIRCSKVKSRVRIAMT 59
S Y H I+ + S + + RC K V I T
Sbjct: 270 SSYFHATCIDGKNQSQARNQCRCPKTSGNVNIVPT 304
>M.Javanica_Scaff1598g016940 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 22.3 bits (46), Expect = 8.0, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 5 NFNNKSNLEKINLFDELNYKS-----IYEHFLIIEC 35
N N++ + +KI L+DE + K+ H+L+ C
Sbjct: 436 NGNSEQDKDKIQLYDEKSEKTELKQDCLTHYLMAAC 471
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15568g072648
(90 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.5
>M.Javanica_Scaff15568g072648 on XP_821438 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 21.9 bits (45), Expect = 7.5, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 17/45 (37%)
Query: 24 NVVPASQGYVHHDPSFYDAQYEQDTQKAIEESGREMPRGRGGPLI 68
+VV + G DA D A+E R +G G P I
Sbjct: 812 SVVQVTSGTSPDGTQTMDAASSHDGNTAVETEARNTVQGDGSPQI 856
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13975g068728
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13377g067190
(125 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 5.2
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 5.2
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 5.2
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 5.3
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 5.4
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.8
>M.Javanica_Scaff13377g067190 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 23.5 bits (49), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 81 IDPVEKVFIINLNHCSKYSSQLKTRILIEIANNEIVKKFLK 121
ID + VFI + N KYSS++ + L I EI +K +K
Sbjct: 1978 IDEIYNVFIQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIK 2018
>M.Javanica_Scaff13377g067190 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 23.5 bits (49), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 81 IDPVEKVFIINLNHCSKYSSQLKTRILIEIANNEIVKKFLK 121
ID + VFI + N KYSS++ + L I EI +K +K
Sbjct: 1988 IDEIYNVFIQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIK 2028
>M.Javanica_Scaff13377g067190 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 23.5 bits (49), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 70 NKKTESFCKIEIDPVEKVFIINLNHCSKYSSQLKTRILIEIANNEIVKKFLK 121
N E++ K ID + VFI + N KYSS++ + L I EI +K +K
Sbjct: 1970 NNNVETY-KNNIDEIYNVFIQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIK 2020
>M.Javanica_Scaff13377g067190 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 23.5 bits (49), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 81 IDPVEKVFIINLNHCSKYSSQLKTRILIEIANNEIVKKFLK 121
ID + VFI + N KYSS++ + L I EI +K +K
Sbjct: 1984 IDEIYNVFIQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIK 2024
>M.Javanica_Scaff13377g067190 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 23.5 bits (49), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 70 NKKTESFCKIEIDPVEKVFIINLNHCSKYSSQLKTRILIEIANNEIVKKFLK 121
N E++ K ID + VFI + N KYSS++ + L I EI +K +K
Sbjct: 1981 NNNVETY-KNNIDEIYNVFIQSYNLIQKYSSEIFSSTLNYIQTKEIKEKSIK 2031
>M.Javanica_Scaff13377g067190 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 22.7 bits (47), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 35 WEEKREFIYLKNIQIKERFILIMNVKQGNKIENYFNKKTESFC 77
W+E E +K K+ + + KQ + Y NKK E C
Sbjct: 1847 WKEHYEKQKIKYENDKDSYTNDPDTKQSPQAYQYLNKKLEKIC 1889
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1496g016143
(212 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 27 0.71
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 27 1.1
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 26 2.3
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 26 2.3
XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.7
XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.7
AAK31241 variable surface protein 42c (Establishment) [Giardi... 25 3.3
XP_817389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.9
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 24 6.1
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 24 6.7
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 24 6.7
>M.Javanica_Scaff1496g016143 on AAW78156 TRAP (Invasion) [Plasmodium falciparum]
Length = 581
Score = 27.3 bits (59), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 28 PELPTKP-----PKKPKNPKLPSNPKKPNPPINDRNAKVVKAKYTEKDTCLSESKANGPI 82
PE P+ P P+ P NP+ PSNP+ P+ P N N + + + E K N P
Sbjct: 349 PENPSNPENPSNPENPSNPENPSNPENPSNPENPSNPENPSNPENPSNPDIPEQKPNIPE 408
Query: 83 KS 84
S
Sbjct: 409 DS 410
>M.Javanica_Scaff1496g016143 on AAW78167 TRAP (Invasion) [Plasmodium falciparum]
Length = 575
Score = 26.9 bits (58), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 26 DCPELPTKP--PKKPKNPKLPSNPKKPNPPINDRNAKVVKAKYTEKDTCLSESKANGPIK 83
D E P P P+ P NP+ PSNP+ P+ P N N + + + E K N P
Sbjct: 344 DLDENPENPSNPENPSNPENPSNPENPSNPENPSNPENPSNPENPSNPDIPEQKPNIPED 403
Query: 84 S 84
S
Sbjct: 404 S 404
>M.Javanica_Scaff1496g016143 on AAW78131 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 25.8 bits (55), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 35 PKKPKNPKLPSNPKKPNPPINDRNAKV 61
P+ P NP+ PSNP+ P+ P N N +
Sbjct: 349 PENPSNPENPSNPENPSNPENPSNPDI 375
Score = 25.0 bits (53), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 28 PELPTKP--PKKPKNPKLPSNPKKPNPP 53
PE P+ P P P+NP P NP P+ P
Sbjct: 349 PENPSNPENPSNPENPSNPENPSNPDIP 376
>M.Javanica_Scaff1496g016143 on AAW78160 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 25.8 bits (55), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 35 PKKPKNPKLPSNPKKPNPPINDRNAKV 61
P+ P NP+ PSNP+ P+ P N N +
Sbjct: 349 PENPSNPENPSNPENPSNPENPSNPDI 375
Score = 25.0 bits (53), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 28 PELPTKP--PKKPKNPKLPSNPKKPNPP 53
PE P+ P P P+NP P NP P+ P
Sbjct: 349 PENPSNPENPSNPENPSNPENPSNPDIP 376
>M.Javanica_Scaff1496g016143 on XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 25.4 bits (54), Expect = 2.7, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 18/123 (14%)
Query: 28 PELPTKPPKKPKNPK-LPSNPKKPNPP---INDRNAKVVKAKYTEKDTCLSES------- 76
PE P +P+ P+ S P++P P D+ A V + D S S
Sbjct: 760 PEEPEPAESRPEEPEPAESRPEEPEPAREGTADQPASVTSSDAASTDVGASSSDDAQTVG 819
Query: 77 -------KANGPIKSNLNKPINGKFTFYGTGGRGACGYDMYEPKFSAAASGSLFNSSGQW 129
+A+ P + ++ P + G+G G + AA S +S QW
Sbjct: 820 TEGGDMMQADQPAQFSVGTPDAANAATHNAEGKGQDGLHPQVNEAEAATLSSSLLNSSQW 879
Query: 130 VES 132
S
Sbjct: 880 DNS 882
>M.Javanica_Scaff1496g016143 on XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 25.4 bits (54), Expect = 2.7, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 18/123 (14%)
Query: 28 PELPTKPPKKPKNPK-LPSNPKKPNPP---INDRNAKVVKAKYTEKDTCLSES------- 76
PE P +P+ P+ S P++P P D+ A V + D S S
Sbjct: 760 PEEPEPAESRPEEPEPAESRPEEPEPAREGTADQPASVTSSDAASTDVGASSSDDAQTVG 819
Query: 77 -------KANGPIKSNLNKPINGKFTFYGTGGRGACGYDMYEPKFSAAASGSLFNSSGQW 129
+A+ P + ++ P + G+G G + AA S +S QW
Sbjct: 820 TEGGDMMQADQPAQFSVGTPDAANAATHNAEGKGQDGLHPQVNEAEAATLSSSLLNSSQW 879
Query: 130 VES 132
S
Sbjct: 880 DNS 882
>M.Javanica_Scaff1496g016143 on AAK31241 variable surface protein 42c (Establishment) [Giardia
duodenalis]
Length = 128
Score = 24.6 bits (52), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 11/75 (14%)
Query: 131 ESCFKDKRYVL-NDPICMSKCVKI---TYKCVGCSTAKTLTVPINNKCPECAINHVDLSI 186
++C + Y N P C C K T C C L+ N+KC +C+ N D +I
Sbjct: 7 QTCANGQTYASGNCPTCAEGCAKCQSSTSTCTECLAGYYLS---NSKCVKCSENSADGNI 63
Query: 187 ----DAFNYLEPKGG 197
+ + EP GG
Sbjct: 64 KGVPNCVSCKEPSGG 78
>M.Javanica_Scaff1496g016143 on XP_817389 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 792
Score = 24.6 bits (52), Expect = 5.9, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 13/88 (14%)
Query: 11 IIFINAALIFSDYPKDCPELPTKPPKKPKN----PKLPSNPKKPNPPINDRN-------- 58
+ N L FS D E P PP P+ P+ +K PP +
Sbjct: 656 VFLYNRPLTFSGGDADLEEAPHLPPANPQPTEAVPQSVEGDQKAMPPAGKPSEAPGEQAT 715
Query: 59 -AKVVKAKYTEKDTCLSESKANGPIKSN 85
+ + + T+++T + ES + + +N
Sbjct: 716 LQQPPEERETQENTTVGESASTQQVPAN 743
>M.Javanica_Scaff1496g016143 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 24.3 bits (51), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 35 PKKPKNPKLPSNPKKPNPP 53
P+ P NP+ PSNP+ P+ P
Sbjct: 349 PENPSNPENPSNPENPSNP 367
>M.Javanica_Scaff1496g016143 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 24.3 bits (51), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 35 PKKPKNPKLPSNPKKPNPP 53
P+ P NP+ PSNP+ P+ P
Sbjct: 349 PENPSNPENPSNPENPSNP 367
>M.Javanica_Scaff1496g016143 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 24.3 bits (51), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 35 PKKPKNPKLPSNPKKPNPP 53
P+ P NP+ PSNP+ P+ P
Sbjct: 349 PENPSNPENPSNPENPSNP 367
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1353g014978
(478 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609533 variant erythrocyte surface antigen-1, alpha subun... 28 2.0
XP_805383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.1
XP_654447 Igl1 (Adhesin) [Entamoeba histolytica] 27 2.3
XP_001609565 variant erythrocyte surface antigen-1, alpha subun... 27 4.6
XP_001611736 variant erythrocyte surface antigen-1, alpha subun... 26 5.1
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.6
>M.Javanica_Scaff1353g014978 on XP_001609533 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1162
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 13/89 (14%)
Query: 219 NISITPLSVSLPPMPTLSQRFITNGRAT------ALIQHIPTNLHCVDEDAARKFNCSLD 272
N S++ L+ + + L+ T AT + + ++ LH E + F ++
Sbjct: 1044 NTSLSRLTKNCQYLSPLTGELYTAVSATFGGTYLSWVLYLSDALHSGLESLSDAFK-EIE 1102
Query: 273 IDTCKDCKPN------HEEGSVSCHCQDV 295
C+DC PN H +GS C CQ +
Sbjct: 1103 CRGCRDCDPNKCKKGVHGQGSGQCGCQSI 1131
>M.Javanica_Scaff1353g014978 on XP_805383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 414
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 388 ECDDGVVFATQCTTNNTEKMIVLPFDRSLIASNCVVDCPAGET 430
E + GV+++ NN + + L D +L+AS + P+G+T
Sbjct: 192 ESNSGVLWSVNTRDNNL-RHVFLSHDLTLVASVTIEKAPSGKT 233
>M.Javanica_Scaff1353g014978 on XP_654447 Igl1 (Adhesin) [Entamoeba histolytica]
Length = 1101
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 24 SETVSIVTKSESCLRSAHGLVCT 46
S+ VSI TK SC R+A+G +CT
Sbjct: 504 SDCVSITTKLPSCERTANGNICT 526
>M.Javanica_Scaff1353g014978 on XP_001609565 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1341
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 10/40 (25%)
Query: 262 DAARKFNCSLDIDTCKDCKPN------HEEGSVSCHCQDV 295
DA R C C++C PN H +GS C CQ +
Sbjct: 1153 DAFRNIECR----GCRECDPNKCKKGEHGQGSGQCGCQSI 1188
>M.Javanica_Scaff1353g014978 on XP_001611736 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1365
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 6/26 (23%)
Query: 276 CKDCKPN------HEEGSVSCHCQDV 295
C+DC PN H +GS C CQ +
Sbjct: 1157 CRDCDPNKCKKGEHGQGSGQCGCQSI 1182
>M.Javanica_Scaff1353g014978 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 25.4 bits (54), Expect = 8.6, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 276 CKDCKPNHEEGSVSCHCQD 294
CK+CK + ++ +V C+C++
Sbjct: 2179 CKNCKSSGDDTNVGCNCKE 2197
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13573g067678
(249 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827748 VSG (Establishment) [Trypanosoma brucei] 25 3.2
>M.Javanica_Scaff13573g067678 on XP_827748 VSG (Establishment) [Trypanosoma brucei]
Length = 550
Score = 25.4 bits (54), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 115 CNLQPKLDFEEQTKNLLKLARNSVKEGFEGIII 147
CN PK +E +T K NS K +GI +
Sbjct: 440 CNADPKCSYETKTDGTKKCKFNSTKAKEKGIPV 472
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13596g067756
(139 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.7
>M.Javanica_Scaff13596g067756 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 23.5 bits (49), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 11/55 (20%)
Query: 18 YNINFVNACK-CAMQPIEINYCRSDWVAHILPLKKENITETDGFSRDVRYTIEIL 71
Y + AC C + +E W A K+EN ++T + D TIEIL
Sbjct: 511 YRTKYCEACPWCGAEKVE-----GGWKA-----KEENCSQTKDYDPDKTTTIEIL 555
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13182g066705
(186 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.3
>M.Javanica_Scaff13182g066705 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 23.5 bits (49), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 11/60 (18%)
Query: 66 QAQFFKI------WGQPDGFIKSVSSINEVKKTSFNEI-----SKCDKSFTRNHCSKGTW 114
+++F+K +G D F+K ++ NE K + E +KCD F +N +KGT+
Sbjct: 446 ESKFYKKLKEKNNYGTVDDFLKLLNKENECKGINEQEEIIDFSNKCDYRFDKNINNKGTF 505
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13705g068061
(98 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803061 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.17
XP_807450 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.17
XP_815514 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.17
XP_804421 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.17
XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.17
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.3
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.3
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.3
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.3
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.3
>M.Javanica_Scaff13705g068061 on XP_803061 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 657
Score = 26.9 bits (58), Expect = 0.17, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 38 IGGLFPIHESTRNTSSSTLCGRIKADQGVQRMVS 71
+ L P +T +TSS T CG +K G+ +S
Sbjct: 495 VSKLCPTSSATEDTSSGTACGAVKITDGLVGFLS 528
>M.Javanica_Scaff13705g068061 on XP_807450 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 810
Score = 26.9 bits (58), Expect = 0.17, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 38 IGGLFPIHESTRNTSSSTLCGRIKADQGVQRMVS 71
+ L P +T +TSS T CG +K G+ +S
Sbjct: 495 VSKLCPTSSATEDTSSGTACGAVKITDGLVGFLS 528
>M.Javanica_Scaff13705g068061 on XP_815514 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 811
Score = 26.9 bits (58), Expect = 0.17, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 38 IGGLFPIHESTRNTSSSTLCGRIKADQGVQRMVS 71
+ L P +T +TSS T CG +K G+ +S
Sbjct: 496 VSKLCPTSSATEDTSSGTACGAVKITDGLVGFLS 529
>M.Javanica_Scaff13705g068061 on XP_804421 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 864
Score = 26.9 bits (58), Expect = 0.17, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 38 IGGLFPIHESTRNTSSSTLCGRIKADQGVQRMVS 71
+ L P +T +TSS T CG +K G+ +S
Sbjct: 549 VSKLCPTSSATEDTSSGTACGAVKITDGLVGFLS 582
>M.Javanica_Scaff13705g068061 on XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 26.9 bits (58), Expect = 0.17, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 38 IGGLFPIHESTRNTSSSTLCGRIKADQGVQRMVS 71
+ L P +T +TSS T CG +K G+ +S
Sbjct: 479 VSKLCPTSSATEDTSSGTACGAVKITDGLVGFLS 512
>M.Javanica_Scaff13705g068061 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 23.5 bits (49), Expect = 3.3, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 64 QGVQRMVSMLYALEQINKN 82
+ +Q+ + ++ +LEQ+NKN
Sbjct: 2525 EQIQKYIEIIKSLEQLNKN 2543
>M.Javanica_Scaff13705g068061 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 23.5 bits (49), Expect = 3.3, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 64 QGVQRMVSMLYALEQINKN 82
+ +Q+ + ++ +LEQ+NKN
Sbjct: 2531 EQIQKYIEIIKSLEQLNKN 2549
>M.Javanica_Scaff13705g068061 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 23.5 bits (49), Expect = 3.3, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 64 QGVQRMVSMLYALEQINKN 82
+ +Q+ + ++ +LEQ+NKN
Sbjct: 2527 EQIQKYIEIIKSLEQLNKN 2545
>M.Javanica_Scaff13705g068061 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 23.5 bits (49), Expect = 3.3, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 64 QGVQRMVSMLYALEQINKN 82
+ +Q+ + ++ +LEQ+NKN
Sbjct: 2538 EQIQKYIEIIKSLEQLNKN 2556
>M.Javanica_Scaff13705g068061 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 23.5 bits (49), Expect = 3.3, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 64 QGVQRMVSMLYALEQINKN 82
+ +Q+ + ++ +LEQ+NKN
Sbjct: 2535 EQIQKYIEIIKSLEQLNKN 2553
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15374g072180
(438 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_650534 HgI (Adhesin) [Entamoeba histolytica] 27 1.9
>M.Javanica_Scaff15374g072180 on XP_650534 HgI (Adhesin) [Entamoeba histolytica]
Length = 1207
Score = 27.3 bits (59), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 237 SLDRTLHSCIQNTRLQSEATCQMKASSKMRSCICNARQAAILE--CVQHSPVAQ 288
S DRT CI NT LQS + C K SSK C+A + E C++ SP +
Sbjct: 503 SCDRTNGECIPNT-LQSSSYCP-KLSSKCEEYYCSAGTCMVQEKKCIKVSPYEE 554
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14583g070244
(82 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13322g067046
(121 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_802704 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.014
XP_804011 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.021
XP_821102 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.050
XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.15
XP_805733 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.16
XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.16
XP_804836 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.20
XP_804512 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.32
XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.33
XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.38
XP_802157 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.57
XP_805204 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.79
XP_802557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.4
>M.Javanica_Scaff13322g067046 on XP_802704 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 318
Score = 30.8 bits (68), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 45 CRNNKKLLGRIKAFDRHCNMVLEDVKEMWTE----LPKKAKGKKKSKPVARDRFIPKLFV 100
CR + + R RH ++ ++ KE+ T L KG A++ P V
Sbjct: 116 CREDDEGCSRAGIASRHLDLTDDNPKEILTTNTSLLMPFPKGAATGTAKAKESMRPTTVV 175
Query: 101 RGDSVILVLKN 111
GDSV ++L+N
Sbjct: 176 AGDSVYMLLRN 186
>M.Javanica_Scaff13322g067046 on XP_804011 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 952
Score = 30.4 bits (67), Expect = 0.021, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 45 CRNNKKLLGRIKAFDRHCNMVLEDVKEMWTE----LPKKAKGKKKSKPVARDRFIPKLFV 100
CR + + R RH ++ ++ KE+ T L KG A++ P V
Sbjct: 116 CREDDEGCSRAGIASRHLDLTDDNPKEILTTNTSLLMPFPKGAATGTAKAKESMRPTTVV 175
Query: 101 RGDSVILVLKN 111
GDSV ++L+N
Sbjct: 176 AGDSVYMLLRN 186
>M.Javanica_Scaff13322g067046 on XP_821102 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 29.3 bits (64), Expect = 0.050, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 45 CRNNKKLLGRIKAFDRHCNMVLEDVKEMWTE----LPKKAKGKKKSKPVARDRFIPKLFV 100
C+ + R RH ++ + KE+ TE + + +G A+D P V
Sbjct: 78 CKEKGESRSRTGIASRHLDLTDDKPKEILTEDTSLVVQFPEGVATGTVEAKDTMRPTTVV 137
Query: 101 RGDSVILVLKNPLALP 116
GDSV ++L+N P
Sbjct: 138 SGDSVYMLLRNQGVTP 153
>M.Javanica_Scaff13322g067046 on XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 997
Score = 28.1 bits (61), Expect = 0.15, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 45 CRNNKKLLGRIKAFDRHCNMVLEDVKEMWTE----LPKKAKGKKKSKPVARDRFIPKLFV 100
C+ + R RH ++ + KE+ TE + + +G A++ P V
Sbjct: 79 CKGKGESCSRTGIASRHLDLTDDKPKEILTEDTSLVMQFPEGVATGTVEAKETMRPTTVV 138
Query: 101 RGDSVILVLKNPLALP 116
GDSV ++L+N P
Sbjct: 139 SGDSVYMLLRNQSVTP 154
>M.Javanica_Scaff13322g067046 on XP_805733 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 27.7 bits (60), Expect = 0.16, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 45 CRNNKKLLGRIKAFDRHCNMVLEDVKEMWTE----LPKKAKGKKKSKPVARDRFIPKLFV 100
C+ + R RH ++ + E+ TE L +G A+D P V
Sbjct: 78 CKEKGESCSRAGIASRHLDLTDDKPTEILTEDTSLLMPFPEGVATGTVEAKDTMRPTTVV 137
Query: 101 RGDSVILVLKNPLALP 116
GDSV ++L+N P
Sbjct: 138 SGDSVYMLLRNQSVTP 153
>M.Javanica_Scaff13322g067046 on XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 986
Score = 27.7 bits (60), Expect = 0.16, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 9/113 (7%)
Query: 11 SQDELAAKEQEEF---NIGPLSVLTHSVRNHAQVLINCRNNKKLLGRIKAFDRHCNMVLE 67
SQ E K E+F + L + ++V A+ L C+ + R RH ++ +
Sbjct: 44 SQWEAPTKVNEKFFSLRVPSLVEVNNNVFFVAEAL--CKEKGESCSRAGIASRHLDLTDD 101
Query: 68 DVKEMWTE----LPKKAKGKKKSKPVARDRFIPKLFVRGDSVILVLKNPLALP 116
E+ TE + + +G A+D P V GDSV ++L+N P
Sbjct: 102 KPTEILTEDTSLVVQFPEGVATGIAKAKDTMRPTTVVSGDSVYMLLRNQSVTP 154
>M.Javanica_Scaff13322g067046 on XP_804836 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 919
Score = 27.7 bits (60), Expect = 0.20, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 45 CRNNKKLLGRIKAFDRHCNMVLEDVKEMWTE----LPKKAKGKKKSKPVARDRFIPKLFV 100
C+ + + R RH ++ + E+ T L KG A+D P V
Sbjct: 79 CKEDNEGCSRAGIASRHLDLSDDKPTEILTRNTSLLIPFPKGAATGTAKAKDSMRPTTVV 138
Query: 101 RGDSVILVLKN 111
GDSV ++L+N
Sbjct: 139 AGDSVYMLLRN 149
>M.Javanica_Scaff13322g067046 on XP_804512 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 310
Score = 26.9 bits (58), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 45 CRNNKKLLGRIKAFDRHCNMVLEDVKEMWTE----LPKKAKGKKKSKPVARDRFIPKLFV 100
C+ + R RH ++ + E+ T+ + + +G A+D P V
Sbjct: 109 CKEKGESCSRAGIASRHLDLTDDKPTEILTQDTSLVVQFPEGVATGAVEAKDTMRPTTVV 168
Query: 101 RGDSVILVLKNPLALP 116
GDSV ++L+N P
Sbjct: 169 AGDSVYMLLRNQSVTP 184
>M.Javanica_Scaff13322g067046 on XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1017
Score = 26.9 bits (58), Expect = 0.33, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 45 CRNNKKLLGRIKAFDRHCNMVLEDVKEMWTE----LPKKAKGKKKSKPVARDRFIPKLFV 100
CR + + R RH ++ + E+ T L KG A++ P V
Sbjct: 117 CREDGEGCSRAGIASRHLDLTDDKPTEILTTNTSLLMPFPKGAATGTAKAKESMRPTTVV 176
Query: 101 RGDSVILVLKN 111
GDSV ++L+N
Sbjct: 177 AGDSVYMLLRN 187
>M.Javanica_Scaff13322g067046 on XP_816886 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 905
Score = 26.6 bits (57), Expect = 0.38, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 45 CRNNKKLLGRIKAFDRHCNMVLEDVKEMWTE----LPKKAKGKKKSKPVARDRFIPKLFV 100
C+ + R RH ++ + E+ TE + + +G A+D P V
Sbjct: 77 CKEKGESCSRTGIASRHLDLTDDKPTEILTEDASLVVQFPEGVATGTVEAKDTMRPTTVV 136
Query: 101 RGDSVILVLKNPLALP 116
GD+V ++L+N P
Sbjct: 137 SGDNVYMLLRNQSVTP 152
>M.Javanica_Scaff13322g067046 on XP_802157 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 312
Score = 26.2 bits (56), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 45 CRNNKKLLGRIKAFDRHCNMVLEDVKEMWTE----LPKKAKGKKKSKPVARDRFIPKLFV 100
C+ + K R R N+ + E+ T L KG A++ P V
Sbjct: 116 CKEDDKGCSRAGIASRRLNLTDDKPTEILTTNTSLLMPFPKGAATGTAKAKESMRPTTVV 175
Query: 101 RGDSVILVLKN 111
GDSV ++L+N
Sbjct: 176 AGDSVYMLLRN 186
>M.Javanica_Scaff13322g067046 on XP_805204 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 978
Score = 25.8 bits (55), Expect = 0.79, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 45 CRNNKKLLGRIKAFDRHCNMVLEDVKEMWTE----LPKKAKGKKKSKPVARDRFIPKLFV 100
C+ + R RH ++ + E+ T+ + + +G A+D P V
Sbjct: 79 CKEKGESCSRAGIASRHLDLTDDKPTEILTQDTSLVVQFPEGVATGAVEAKDTMRPTTVV 138
Query: 101 RGDSVILVLKNPLALP 116
GDSV ++L+N P
Sbjct: 139 AGDSVYMLLRNQSVTP 154
>M.Javanica_Scaff13322g067046 on XP_802557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 608
Score = 25.0 bits (53), Expect = 1.4, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 90 ARDRFIPKLFVRGDSVILVLKNPLALP 116
A+D P V GDSV ++L+N P
Sbjct: 22 AKDTMRPTTVVAGDSVYMLLRNQSVTP 48
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13498g067487
(114 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812043 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.73
XP_809659 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.74
XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.7
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.0
XP_001609533 variant erythrocyte surface antigen-1, alpha subun... 24 2.3
XP_802326 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.7
XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.3
AAK69358 P0 (Invasion) [Toxoplasma gondii] 23 4.0
XP_812515 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.3
XP_820458 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.0
XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.4
XP_829762 VSG (Establishment) [Trypanosoma brucei] 23 5.7
XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.2
XP_808182 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.9
XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.7
>M.Javanica_Scaff13498g067487 on XP_812043 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 807
Score = 25.8 bits (55), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 64 SVPSGAPAVAGPAATGAAAAAPAAEEKKEEKKKEE----KKEESDDDDMGF 110
++ S PAV GP T AA A P + ++ E K+ S +D+ F
Sbjct: 728 TIASAVPAVPGPEKTSAAPAVPMTLDPHAVEEVSESGAAKRNTSRTEDVQF 778
>M.Javanica_Scaff13498g067487 on XP_809659 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 796
Score = 25.8 bits (55), Expect = 0.74, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 54 VIAAGEKKLSSVPSG-APAVAGPAATGAAAAAP 85
+ A EK++ P APAV GP AA+A P
Sbjct: 704 LTGAPEKQVKIAPKPVAPAVPGPEKNSAASAVP 736
>M.Javanica_Scaff13498g067487 on XP_814927 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 759
Score = 24.6 bits (52), Expect = 1.7, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 87 AEEKKEEKKKEEKKEESDDDD 107
+E+KKE E+KKE D +D
Sbjct: 708 SEDKKESGDSEDKKESGDSED 728
>M.Javanica_Scaff13498g067487 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 24.6 bits (52), Expect = 2.0, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 25/66 (37%)
Query: 42 VVKALEGKNLDEVIAAGEKKLSSVPSGAPAVAGPAATGAAAAAPAAEEKKEEKKKEEKKE 101
V+K E + DE S VP P A EE K+++ +E+
Sbjct: 1558 VLKPTEDETYDESPEDDTSTTSVVPEFCEQFVKPEAPPPKVPEIPKEEDKDKRDEEKPAS 1617
Query: 102 ESDDDD 107
+DD D
Sbjct: 1618 PTDDVD 1623
>M.Javanica_Scaff13498g067487 on XP_001609533 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1162
Score = 24.3 bits (51), Expect = 2.3, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 30 GGLDVDMENAKAVVKALEGKNLDEVIAAGEKKLSSVPSGAPAVAGPAATGAAAAAPAAEE 89
GGLDV + AK ++AL + GE KL + +G + + +
Sbjct: 688 GGLDVKLGEAKTALEALTNGGSGILGEVGE-KLETATNGEYDPGKNKISESINKVREVLK 746
Query: 90 KKEEKKKEEKKEESDDDDMGFGL 112
+ E+ KE KK+E DD + G+
Sbjct: 747 ELEKVIKELKKKEVDDANELLGV 769
>M.Javanica_Scaff13498g067487 on XP_802326 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 91
Score = 23.1 bits (48), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
Query: 64 SVPSGAPAVAGPAATGAAAAAP------AAEEKKEEKKKEEKKEESDDDDMGF 110
++ S PAV GP T AA A P A EE E K+ S +D+ F
Sbjct: 12 TIASAVPAVPGPEKTSAAPAVPMTLDPHAVEEVSESGAA--KRNTSRTEDVQF 62
>M.Javanica_Scaff13498g067487 on XP_804895 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 23.9 bits (50), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 69 APAVAGPAATGAAAAAPAAEEKKEEKKKEE----KKEESDDDDMGF 110
APAV GP AA+A P + ++ E K+ S +D+ F
Sbjct: 713 APAVPGPEKNSAASAVPMTLDPHAVEEVSEGGAAKRNTSRTEDVQF 758
>M.Javanica_Scaff13498g067487 on AAK69358 P0 (Invasion) [Toxoplasma gondii]
Length = 314
Score = 23.5 bits (49), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 106 DDMGFGLFD 114
DDMGF LFD
Sbjct: 306 DDMGFSLFD 314
>M.Javanica_Scaff13498g067487 on XP_812515 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 23.5 bits (49), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 26 ILGAGGLDVDMENAKAVVKA--LEGKNLDEV-IAAGEKKLSSVPSGAPAVAGPAATGAAA 82
I G GG + E+ V L + LD+ IAA +S P PAV P+ A
Sbjct: 687 IGGNGGSAENKEDVSVTVTNVLLYNRPLDDTEIAALNPNKASTP---PAVNAPSQGTAIE 743
Query: 83 AAPAAEEKKEEKK 95
+P A+ K+E+++
Sbjct: 744 TSPGAQGKEEQRQ 756
>M.Javanica_Scaff13498g067487 on XP_820458 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 23.1 bits (48), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 2 KYVAAYMLASLGGNAQPTAKDLE 24
K +AY+ +L GNAQ KD+E
Sbjct: 662 KQCSAYVHDTLVGNAQLDLKDIE 684
>M.Javanica_Scaff13498g067487 on XP_817382 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 23.1 bits (48), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 23 LEKILGAGGLDVDMENAKAV 42
L +++G+GG DV ME+ V
Sbjct: 250 LMRLIGSGGSDVKMEDGTLV 269
>M.Javanica_Scaff13498g067487 on XP_829762 VSG (Establishment) [Trypanosoma brucei]
Length = 503
Score = 23.1 bits (48), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 19/46 (41%)
Query: 15 NAQPTAKDLEKILGAGGLDVDMENAKAVVKALEGKNLDEVIAAGEK 60
N P +K L +LGAG DV + V A AGEK
Sbjct: 168 NNNPKSKLLAALLGAGNADVGTATGQKAVGAEATDTRQATCTAGEK 213
>M.Javanica_Scaff13498g067487 on XP_966160 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2394
Score = 23.1 bits (48), Expect = 6.2, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 90 KKEEKKKEEKKEESDDDDMGF 110
+K+ KKE K ES+D+D F
Sbjct: 1598 QKQNCKKERKAAESNDNDKQF 1618
>M.Javanica_Scaff13498g067487 on XP_808182 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 918
Score = 22.7 bits (47), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 11 SLGGNAQPTAKDLEKILG 28
S+GGNAQ KD+E+ G
Sbjct: 664 SVGGNAQFDLKDIERSRG 681
>M.Javanica_Scaff13498g067487 on XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2181
Score = 22.3 bits (46), Expect = 9.7, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 91 KEEKKKEEKKEESDDD 106
K++ +K+EKKEE+ +D
Sbjct: 1663 KDDSEKDEKKEENSED 1678
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13084g066431
(119 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.4
XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.7
XP_814623 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.0
XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.8
XP_846884 VSG (Establishment) [Trypanosoma brucei] 23 9.3
>M.Javanica_Scaff13084g066431 on XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 25.0 bits (53), Expect = 1.4, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 30 EWKRRILYCSPSKDGKHSGQCYLTVGKEEKPKLAKCHEESFKLATG 75
E ++R+ P+ + G+ Y+ VGK +A+C S K+ +G
Sbjct: 156 EEEKRVDVSRPTAVAE-GGKIYMLVGKHSHEDVAECKATSEKIKSG 200
>M.Javanica_Scaff13084g066431 on XP_810383 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 23.9 bits (50), Expect = 3.7, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 30 EWKRRILYCSPSKDGKHSGQCYLTVGKEEKPKLAKCHEESFKLATG 75
E +RR+ P+ + G+ Y+ VGK +A+C S K +G
Sbjct: 156 EEERRVDVSRPTAVVE-GGKIYMLVGKHSHGDVAECKATSEKTKSG 200
>M.Javanica_Scaff13084g066431 on XP_814623 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 895
Score = 23.5 bits (49), Expect = 4.0, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
Query: 51 YLTVGKEEKPKLAKCH--EESFK----LATGEIEG 79
Y+ VGK LA+C E FK L GE+ G
Sbjct: 194 YMLVGKHSHENLAECKATSEKFKSGMLLVKGEVSG 228
>M.Javanica_Scaff13084g066431 on XP_820670 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 883
Score = 23.1 bits (48), Expect = 6.8, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 51 YLTVGKEEKPKLAKCHEESFKLATG 75
Y+ VGK A C E+ K+ +G
Sbjct: 181 YMLVGKHSHEAAANCQAETEKIKSG 205
>M.Javanica_Scaff13084g066431 on XP_846884 VSG (Establishment) [Trypanosoma brucei]
Length = 493
Score = 22.7 bits (47), Expect = 9.3, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 40 PSKDGKHSGQCYLTVGKEEKPKLAKCHEESFKLATGEIEGRTSCN 84
P++D +G T ++++PKLA S A G SC+
Sbjct: 169 PTEDQTETGVKITTESEKDEPKLATIKLHSNAQAKCTATGANSCH 213
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15613g072751
(51 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAW71459 Plasmepsin IV (Proteases) [Plasmodium falciparum] 23 0.89
AAW71463 Plasmepsin IV (Proteases) [Plasmodium falciparum] 23 0.89
>M.Javanica_Scaff15613g072751 on AAW71459 Plasmepsin IV (Proteases) [Plasmodium falciparum]
Length = 448
Score = 23.1 bits (48), Expect = 0.89, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 28 TENISSGTSFVKKLFRD 44
T I++ TSF+ K FRD
Sbjct: 338 TSTITAPTSFLNKFFRD 354
>M.Javanica_Scaff15613g072751 on AAW71463 Plasmepsin IV (Proteases) [Plasmodium falciparum]
Length = 448
Score = 23.1 bits (48), Expect = 0.89, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 28 TENISSGTSFVKKLFRD 44
T I++ TSF+ K FRD
Sbjct: 338 TSTITAPTSFLNKFFRD 354
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14407g069820
(747 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK31248 variable surface protein IVf (Establishment) [Giardi... 30 0.35
AAK31237 variable surface protein 21e (Establishment) [Giardi... 27 1.9
AAK31242 variable surface protein 42d (Establishment) [Giardi... 27 2.2
XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.7
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 27 4.1
XP_820072 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.6
AAK31227 variable surface protein 14a (Establishment) [Giardi... 26 6.4
AAK31245 variable surface protein IVc (Establishment) [Giardi... 26 6.4
AAK31229 variable surface protein 14c (Establishment) [Giardi... 26 6.4
AAK31231 variable surface protein 14e (Establishment) [Giardi... 26 6.7
>M.Javanica_Scaff14407g069820 on AAK31248 variable surface protein IVf (Establishment) [Giardia
duodenalis]
Length = 166
Score = 29.6 bits (65), Expect = 0.35, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 13/70 (18%)
Query: 357 TGHGGHCYECMGNTQVKKNIFNLKGVNCERCLPNHWRSPNNNYCKPLTGKYCDKCLDGYF 416
TG+ G C C Q + NC C K C KCL GY+
Sbjct: 36 TGNNGQCTACANGQQPASGVCPACAANCASCTGT-------------DTKTCTKCLSGYY 82
Query: 417 GFGINGCKKC 426
+ C+KC
Sbjct: 83 LDSGSVCRKC 92
>M.Javanica_Scaff14407g069820 on AAK31237 variable surface protein 21e (Establishment) [Giardia
duodenalis]
Length = 132
Score = 27.3 bits (59), Expect = 1.9, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 680 IPHSSSANWIENCNCP----PPYSGQF-CQFCASGFKREFPGPLSKCIPCQCNGHSLVVK 734
+ ++SA W NC P +G C CASG+K E C+P N S +
Sbjct: 59 VTDANSAQWKGVANCAKCTQPSAAGTVKCSECASGYKLEG----EACVPASTNLSSGAIA 114
Query: 735 CVSQKLVFVIANI 747
+S ++ V+ +
Sbjct: 115 GISVAVIAVVGGL 127
>M.Javanica_Scaff14407g069820 on AAK31242 variable surface protein 42d (Establishment) [Giardia
duodenalis]
Length = 169
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Query: 402 PLTGKYCDKCLDGYFGFGINGCKKCLC-NNYSNSSICSPLNGKCFCKENVEGEYC----D 456
P +GK C C D G+ GC+KC + + C+ K + K +G
Sbjct: 13 PESGKKCFACGDT--TNGVIGCEKCTAPGDGKTNPTCTKCTDK-YLKTAADGTTTCVAKG 69
Query: 457 RCKPGYFLIKNNKNNFECFPC 477
CK YF + ++ N +C C
Sbjct: 70 ACKDDYFTVDDSTNGHKCVSC 90
Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 680 IPHSSSANWIENCNCP----PPYSGQF-CQFCASGFKREFPGPLSKCIPCQCNGHSLVVK 734
+ ++SA W NC P +G C CASG+K E C+P N S +
Sbjct: 96 VTDANSAQWKGVANCAKCTQPSAAGTVKCSECASGYKLEG----EACVPASTNLSSGAIA 151
Query: 735 CVSQKLVFVIANI 747
+S ++ V+ +
Sbjct: 152 GISVAVIAVVGGL 164
>M.Javanica_Scaff14407g069820 on XP_804105 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1017
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 577 APRTSTELQLIGSKGDILSLSFSSQQNPNIS 607
APRT L++ GS G QQ PN+S
Sbjct: 10 APRTHNRLRVTGSSGKRKGGREREQQRPNVS 40
>M.Javanica_Scaff14407g069820 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 421 NGCKKCLCNNYSNSSICSPLNGKCFCKENVE-GEYCDRCKPGYFLIKNNKNNFECFPCFC 479
NGC KC + CS + C + ++ G CD CK GY++ +N EC P C
Sbjct: 840 NGCAKC----DDKCATCSDKDTCLTCTDPLKIGSKCDECKTGYYM-----SNGECKP--C 888
Query: 480 FGHSSICYS 488
H S C S
Sbjct: 889 TNHCSECSS 897
>M.Javanica_Scaff14407g069820 on XP_820072 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 577 APRTSTELQLIGSKGDILSLSFSSQQNPNIS 607
APRT ++ GS+G S QQ PN+S
Sbjct: 10 APRTDNRRRVTGSRGKRKGGRESEQQRPNMS 40
>M.Javanica_Scaff14407g069820 on AAK31227 variable surface protein 14a (Establishment) [Giardia
duodenalis]
Length = 157
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 400 CKPLTGKYCDKCLDGYFGFGINGCKKC 426
C + K C KC GY+ N CKKC
Sbjct: 59 CTGTSSKTCTKCFSGYYLDSANACKKC 85
>M.Javanica_Scaff14407g069820 on AAK31245 variable surface protein IVc (Establishment) [Giardia
duodenalis]
Length = 157
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 400 CKPLTGKYCDKCLDGYFGFGINGCKKC 426
C + K C KC GY+ N CKKC
Sbjct: 59 CTGTSSKTCTKCFSGYYLDSANACKKC 85
>M.Javanica_Scaff14407g069820 on AAK31229 variable surface protein 14c (Establishment) [Giardia
duodenalis]
Length = 158
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 400 CKPLTGKYCDKCLDGYFGFGINGCKKC 426
C + K C KC GY+ N CKKC
Sbjct: 60 CTGTSSKTCTKCFSGYYLDSANACKKC 86
>M.Javanica_Scaff14407g069820 on AAK31231 variable surface protein 14e (Establishment) [Giardia
duodenalis]
Length = 157
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 400 CKPLTGKYCDKCLDGYFGFGINGCKKC 426
C + K C KC GY+ N CKKC
Sbjct: 59 CTGTSSKTCTKCFSGYYLDSANACKKC 85
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1589g016869
(99 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.8
XP_811304 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.3
XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.5
>M.Javanica_Scaff1589g016869 on XP_966305 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3954
Score = 24.3 bits (51), Expect = 1.8, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 79 DRHGLWKCIQDPSGNTR 95
+++ WKCI D S TR
Sbjct: 1722 EKYTQWKCINDSSNTTR 1738
>M.Javanica_Scaff1589g016869 on XP_811304 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 892
Score = 23.1 bits (48), Expect = 4.3, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 23 GEGVCVHQGKEYRNGEEWTYRSFIMRCDVHHNYWQTKVVACVSLM 67
G G V G Y N +W R + H + W+ + V+++
Sbjct: 701 GAGSSVFLGLSYNNKNKWQLRCGDEKTTEHSSSWKPETTHHVAIV 745
>M.Javanica_Scaff1589g016869 on XP_813143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 795
Score = 23.1 bits (48), Expect = 4.5, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 23 GEGVCVHQGKEYRNGEEWTYRSFIMRCDVHHNYWQTKVVACVSLM 67
G G V G Y N +W R + H + W+ + V+++
Sbjct: 604 GAGSSVFLGLSYNNKNKWQLRCGDEKTTEHSSSWKPETTHHVAIV 648
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13g000332
(211 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_627530 p23 (Adhesin) [Cryptosporidium parvum] 27 0.83
XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.5
>M.Javanica_Scaff13g000332 on XP_627530 p23 (Adhesin) [Cryptosporidium parvum]
Length = 211
Score = 26.6 bits (57), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 137 IRIAFCRPLDKIFHVKCKGMRSLARVIGRLDMETGDRLVHVNDTLIFCRCESNKWI 192
R+ F +P++K + + RSL +I + + E +V + + +C+ N+WI
Sbjct: 80 FRLDFLKPINKE-ESRYQVTRSLHFMITKKEEERWSSIVKDSSKTKWLKCDWNRWI 134
>M.Javanica_Scaff13g000332 on XP_001348176 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3119
Score = 24.6 bits (52), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/62 (20%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 32 ACAVELMKFPELVNDERDDIKEGHNEINDE-GVSEGSGENNDDDKLHFVPMSMSFPIYDE 90
C E +K+ + + ++R++ + + +E G+ E+ D++++ P M +P++++
Sbjct: 2200 GCQKECIKYKKWIVNKRNEFNKQKKKFENEIKTVNGTNEDKYDEEVYKNPKLM-YPLFND 2258
Query: 91 FV 92
FV
Sbjct: 2259 FV 2260
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15668g072882
(73 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.22
XP_818403 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.78
XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.2
XP_816001 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.8
XP_001609166 variant erythrocyte surface antigen-1, beta subuni... 23 1.8
XP_803334 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.9
XP_820458 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.0
XP_809960 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.9
XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.0
XP_814492 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.0
XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.4
XP_808402 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.8
XP_829785 VSG (Establishment) [Trypanosoma brucei] 22 5.4
XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 5.9
XP_822017 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.0
XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.3
XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.9
XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.0
XP_818892 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.3
XP_822022 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.0
XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.6
XP_819341 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 9.0
XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 9.2
XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 9.5
>M.Javanica_Scaff15668g072882 on XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 898
Score = 25.8 bits (55), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 9/39 (23%), Positives = 20/39 (51%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCASFQC 47
V +L AW+ + D +C ++V + + +C +F+
Sbjct: 469 VKKVLTAWKEVDDRVSKLCRSENVESISSENACSPTFKI 507
>M.Javanica_Scaff15668g072882 on XP_818403 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 957
Score = 24.3 bits (51), Expect = 0.78, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGAS 40
V +L W+++ D N+C + +G+ GA+
Sbjct: 485 VKDVLTTWKKVDDLVSNLCPSSAAESGSTGAA 516
>M.Javanica_Scaff15668g072882 on XP_001349513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2858
Score = 23.9 bits (50), Expect = 1.2, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 18 RLTDNTCNICGFDSVPAGTGGASCCASFQ----CNLSKEFLEE 56
R +D IC + + GG CA ++ C+ + E++ E
Sbjct: 104 RFSDKGDAICTNNKINCNNGGCGACAPYRRIQLCDYNLEYINE 146
>M.Javanica_Scaff15668g072882 on XP_816001 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 430
Score = 23.1 bits (48), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 8/39 (20%), Positives = 18/39 (46%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCASFQC 47
V +L W+++ + +C F S T + C++ +
Sbjct: 13 VKKVLATWKKVDERVSKLCPFKSALEDTPADNGCSAVKI 51
>M.Javanica_Scaff15668g072882 on XP_001609166 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1161
Score = 23.5 bits (49), Expect = 1.8, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 7/37 (18%)
Query: 14 IAWERLTDNTCNICGFDSV------PAGTGGASCCAS 44
+ W+ D+ C + G D + P+G G + CC++
Sbjct: 139 VGWQEKGDDCC-LKGTDGIGKKCDCPSGVGASGCCST 174
>M.Javanica_Scaff15668g072882 on XP_803334 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 474
Score = 23.1 bits (48), Expect = 1.9, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCAS 44
VN ++ W+++ ++ +C S T + C S
Sbjct: 143 VNEVVATWKKVDESVSKLCHTSSAAESTSTGTACTS 178
>M.Javanica_Scaff15668g072882 on XP_820458 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 23.1 bits (48), Expect = 2.0, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCASFQ 46
V +L W+ + D +C S + + G +C +F+
Sbjct: 476 VKDVLSTWKEVDDRVSKLCPSKSAESPSPGNACSPTFK 513
>M.Javanica_Scaff15668g072882 on XP_809960 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 22.7 bits (47), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 8/37 (21%), Positives = 16/37 (43%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCASF 45
V +L W+++ ++ +C S T + C S
Sbjct: 464 VKEVLATWKKVDESVSKLCPTSSAAESTSTGTVCTSV 500
>M.Javanica_Scaff15668g072882 on XP_821909 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 22.7 bits (47), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCAS 44
V +L W + D +C +SV T + C++
Sbjct: 481 VKDVLATWMEVDDRVSKLCPTESVGRDTSTGTACSA 516
>M.Javanica_Scaff15668g072882 on XP_814492 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 923
Score = 22.3 bits (46), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 8/37 (21%), Positives = 15/37 (40%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCASF 45
V +L W+++ + +C S T + C S
Sbjct: 472 VKDVLATWKKVDERVSKLCPTSSAAESTSTGTACTSV 508
>M.Javanica_Scaff15668g072882 on XP_818092 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 22.3 bits (46), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCC 42
V +L W++ D +C V + G +C
Sbjct: 472 VKEVLATWKKADDRVSKLCPSSDVEDASTGDACS 505
>M.Javanica_Scaff15668g072882 on XP_808402 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 21.9 bits (45), Expect = 4.8, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCA 43
V +L W+++ + +C S GT + C+
Sbjct: 470 VKEVLATWKKVDERVSKMCPSGSAVQGTSADTACS 504
>M.Javanica_Scaff15668g072882 on XP_829785 VSG (Establishment) [Trypanosoma brucei]
Length = 484
Score = 21.9 bits (45), Expect = 5.4, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 26 ICGFDSVPAGTGGASCCASFQ 46
ICG +SV +G + C S Q
Sbjct: 211 ICGSNSVSSGAPNTASCTSTQ 231
>M.Javanica_Scaff15668g072882 on XP_805084 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 828
Score = 21.9 bits (45), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 10/50 (20%), Positives = 21/50 (42%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCASFQCNLSKEFLEEDG 58
+N +L WE + D +C + + + A+C + F ++G
Sbjct: 434 INFLLQTWEAVDDRVSTLCSSSAGKSASKDAACVGRLPTDGLVAFFSDNG 483
>M.Javanica_Scaff15668g072882 on XP_822017 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 990
Score = 21.9 bits (45), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 7/36 (19%), Positives = 17/36 (47%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCAS 44
V +L W+++ + +C +S T + C++
Sbjct: 563 VKEVLATWKKVDERVSKLCPTESALKDTSTVNACST 598
>M.Javanica_Scaff15668g072882 on XP_808550 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 948
Score = 21.9 bits (45), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 8/39 (20%), Positives = 15/39 (38%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCASFQC 47
V +L W+ + D +C +S S C+ +
Sbjct: 480 VKDVLATWKEVDDRVSKLCPSESAVQAPSTDSACSDVKI 518
>M.Javanica_Scaff15668g072882 on XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 21.6 bits (44), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGT-GGASCCASFQC 47
V +L W+ + + +C +SV T G +C A +
Sbjct: 478 VKEVLATWKEVDERVSQLCTSESVGRDTLPGTACSADIKI 517
>M.Javanica_Scaff15668g072882 on XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 21.6 bits (44), Expect = 7.0, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 15/36 (41%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCAS 44
V +L W+++ D +C S A+ C +
Sbjct: 483 VKDVLATWKKVDDRVSKLCPTSSTAKDASTATACGN 518
>M.Javanica_Scaff15668g072882 on XP_818892 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 21.6 bits (44), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGT-GGASCCASFQC 47
V +L W+ + + +C +SV T G +C A +
Sbjct: 478 VKEVLATWKEVDERVSQLCTSESVGRDTLPGTACSADIKI 517
>M.Javanica_Scaff15668g072882 on XP_822022 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 791
Score = 21.6 bits (44), Expect = 8.0, Method: Composition-based stats.
Identities = 7/38 (18%), Positives = 16/38 (42%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCASFQ 46
V +L W+++ D +C S + C++ +
Sbjct: 469 VKEVLATWKKVDDRVSKLCPLSSATVSKSTDNACSAVK 506
>M.Javanica_Scaff15668g072882 on XP_804800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 21.6 bits (44), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 7/36 (19%), Positives = 16/36 (44%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCAS 44
V +L W+++ + +C +SV + C +
Sbjct: 479 VKKVLATWKKVDERVSKLCPTESVGRDASTGTACTT 514
>M.Javanica_Scaff15668g072882 on XP_819341 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 888
Score = 21.2 bits (43), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 7/39 (17%), Positives = 18/39 (46%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCASFQC 47
V +L W+++ + +C +V + G +C + +
Sbjct: 483 VKDVLATWKKVDETVSKLCPSSAVENPSPGNACSTTVKI 521
>M.Javanica_Scaff15668g072882 on XP_817003 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 21.2 bits (43), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 8/39 (20%), Positives = 17/39 (43%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCASFQC 47
V +L W+++ + +C +S T S C + +
Sbjct: 462 VKEVLTTWKKVDERVFQLCPSESALEDTPTESACKNIKI 500
>M.Javanica_Scaff15668g072882 on XP_812339 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 21.2 bits (43), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 9 VNPILIAWERLTDNTCNICGFDSVPAGTGGASCCA 43
V +L W+++ D +C S T + C+
Sbjct: 466 VKDVLATWKKVDDLVSKLCTTSSAVESTPSENACS 500
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1462g015889
(92 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.9
XP_828093 VSG (Establishment) [Trypanosoma brucei] 22 7.1
XP_828092 VSG (Establishment) [Trypanosoma brucei] 22 7.7
>M.Javanica_Scaff1462g015889 on XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 986
Score = 23.1 bits (48), Expect = 3.9, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 4 QANSQQLLSIAEICFNIVKSRYKLNTR------QRKRLLPYAEFVRRMSRARSERGARKI 57
QA S+ + F+ ++++KL+ + + ++ + E R + A ERG R +
Sbjct: 223 QATVDGKTSLLSMRFDKPENKWKLSHQTVGDGCRDPTIVEWGEENRLLMMASCERGYRDV 282
Query: 58 ISQKGSG 64
+ GSG
Sbjct: 283 YASTGSG 289
>M.Javanica_Scaff1462g015889 on XP_828093 VSG (Establishment) [Trypanosoma brucei]
Length = 512
Score = 22.3 bits (46), Expect = 7.1, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 23/38 (60%)
Query: 22 KSRYKLNTRQRKRLLPYAEFVRRMSRARSERGARKIIS 59
K++ + TR+++ L Y E +R++ + ++ A ++S
Sbjct: 469 KTKCEEKTREKQPLFVYGEKAKRVNLIKIKKCAEMVVS 506
>M.Javanica_Scaff1462g015889 on XP_828092 VSG (Establishment) [Trypanosoma brucei]
Length = 532
Score = 21.9 bits (45), Expect = 7.7, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 23/38 (60%)
Query: 22 KSRYKLNTRQRKRLLPYAEFVRRMSRARSERGARKIIS 59
K++ + TR+++ L Y E +R++ + ++ A ++S
Sbjct: 489 KTKCEEKTREKQPLFVYGEKAKRVNLIKIKKCAEMVVS 526
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13992g068768
(123 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804689 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.1
AAR10290 GRA9 (Establishment) [Toxoplasma gondii] 25 1.6
XP_813236 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.9
XP_827707 VSG (Establishment) [Trypanosoma brucei] 24 3.8
XP_802771 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.1
>M.Javanica_Scaff13992g068768 on XP_804689 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 213
Score = 25.0 bits (53), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 6 KGAYIHKYTGIWSLGLDLLPTIAQRTLDLFVYRGCACGI 44
+G I Y SLG + LP +R L+ + ACGI
Sbjct: 96 QGNKISVYVDGKSLGEEELPLTGERPLEYLRFCFGACGI 134
>M.Javanica_Scaff13992g068768 on AAR10290 GRA9 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 24.6 bits (52), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 27 IAQRTLDLFVYRGCACGIYAWNPATFDSPARRVPQNP 63
+A LDLF+ G+Y + A+ A +VP++P
Sbjct: 16 VAAAELDLFL---GESGVYLFGKASESDVALKVPEDP 49
>M.Javanica_Scaff13992g068768 on XP_813236 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 24.3 bits (51), Expect = 2.9, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 18 SLGLDLLPTIAQRTLDLFVYRGCACGI 44
SLG + LP ++R L+L + ACGI
Sbjct: 637 SLGEEELPLKSERPLELVSFCFGACGI 663
>M.Javanica_Scaff13992g068768 on XP_827707 VSG (Establishment) [Trypanosoma brucei]
Length = 474
Score = 23.9 bits (50), Expect = 3.8, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 14 TGIWSLGLDLLPTIAQRTLDLFVYRGCA--CGI----YAWNPA 50
TG WSL +DLL A+ V C CG WNPA
Sbjct: 202 TGGWSLAVDLLCLCARHISWSSVKSVCCEECGTGENSNTWNPA 244
>M.Javanica_Scaff13992g068768 on XP_802771 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 341
Score = 22.7 bits (47), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 53 DSPARRVPQNPARSAGFCTSALPA 76
DS A P PA S+ T ++PA
Sbjct: 263 DSSAHSTPSTPADSSAHSTPSIPA 286
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15211g071799
(394 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_814620 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.24
XP_818344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.60
XP_810808 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.92
XP_828093 VSG (Establishment) [Trypanosoma brucei] 28 1.2
XP_804817 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.8
XP_818346 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.8
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 26 4.3
XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.9
XP_811406 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.8
XP_001609167 variant erythrocyte surface antigen-1, alpha subun... 25 9.7
>M.Javanica_Scaff15211g071799 on XP_814620 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 30.0 bits (66), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 33/79 (41%)
Query: 286 TNDNEEQREELKPNPLKTGSRKSNDSSSSSSSSENVEKQVNNAINEEEKEMIKKENEKKA 345
TN +EQ E P+ + +G K D +SSS V + A+ + + A
Sbjct: 781 TNSGKEQSEIQPPSAISSGGSKHVDVASSSDGDPRVGAEAGGAVQGDTPPQTPVDTPDTA 840
Query: 346 EDNKLNDDDSASSSGSASS 364
+ N D+A +A++
Sbjct: 841 DANAPTATDTAQVGPAATT 859
>M.Javanica_Scaff15211g071799 on XP_818344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 928
Score = 28.9 bits (63), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 286 TNDNEEQREELKPNPLKTGSRKSNDSSSSSSSSENVEKQVNNAINEEEKEMIKKENEKKA 345
T+ +EQ E P+ + +G K D +SSS V + A++ + + A
Sbjct: 777 TSLGKEQSEIQPPSVISSGGSKHVDIASSSDGDPTVGAEAGGAVHGDTPPQTPVDTPDTA 836
Query: 346 EDNKLNDDDSASSSGSASS 364
+ N N D+A +A++
Sbjct: 837 DANAPNATDAAQVGPAATT 855
>M.Javanica_Scaff15211g071799 on XP_810808 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 735
Score = 28.1 bits (61), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 220 SLLIENELRKD----FTEKVPMQLVDFCMKGADKNEEVKQEQNV 259
S+ I+ EL + T + P++LV FC D+ E +Q+ +V
Sbjct: 635 SVYIDGELLGEEEAPLTGEAPLELVRFCFGAYDQKEGHEQDSHV 678
>M.Javanica_Scaff15211g071799 on XP_828093 VSG (Establishment) [Trypanosoma brucei]
Length = 512
Score = 27.7 bits (60), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 327 NAINEEEKEMIKKENEKKAED--NKLNDDDSASSSGSAS-SVEEPDKDKKGKVDRMNKKS 383
NA+ ++ E KK++ K AED NK+ D+ + S+ + + E D++KK K D KS
Sbjct: 384 NALQKKLDEATKKKDTKAAEDTCNKIKDETACSNKPFCTYNTTETDENKKCKFDETKAKS 443
Query: 384 KNKG 387
K G
Sbjct: 444 KVNG 447
>M.Javanica_Scaff15211g071799 on XP_804817 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 27.3 bits (59), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 220 SLLIENELRKD----FTEKVPMQLVDFCMKGADKNEEVKQEQNV 259
S+ I+ +L + FT K P++ VD C G E QE +V
Sbjct: 652 SVYIDGQLLGEEGVLFTNKTPLEFVDLCF-GVCGEENPSQESHV 694
>M.Javanica_Scaff15211g071799 on XP_818346 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 927
Score = 26.2 bits (56), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 32/79 (40%)
Query: 286 TNDNEEQREELKPNPLKTGSRKSNDSSSSSSSSENVEKQVNNAINEEEKEMIKKENEKKA 345
T+ +EQ E P+ + +G K D +SSS V + A+ + + A
Sbjct: 777 TSLGKEQSEIQPPSAISSGGSKHVDVASSSDGDPTVGAEAGGAVQGDTPPQTPVDTPDTA 836
Query: 346 EDNKLNDDDSASSSGSASS 364
N D+A +A++
Sbjct: 837 GANAPTATDTAQVGPTATT 855
>M.Javanica_Scaff15211g071799 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 26.2 bits (56), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 23/99 (23%)
Query: 51 PLGKRYDNGENIENEMAKNENDVSGKV--------NEKVKSSNLNDKKGFEDEEGES--- 99
P G++ D GE+I+++ AK+ D GK+ E+ L K F GE+
Sbjct: 3 PGGRQGDGGEDIDHQSAKHLLDSIGKIVHDQMKKEAEQRSKGELEGKLSFATVSGETGAT 62
Query: 100 -------IKKMKNRNEGKQELINNFPFLRDVPNEEVKKF 131
K+ N+GK+ P +D EEV +F
Sbjct: 63 DKPCNFDYDKLIGANDGKRH-----PCKKDGKGEEVPRF 96
>M.Javanica_Scaff15211g071799 on XP_813677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 945
Score = 25.8 bits (55), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 32/79 (40%)
Query: 286 TNDNEEQREELKPNPLKTGSRKSNDSSSSSSSSENVEKQVNNAINEEEKEMIKKENEKKA 345
TN +EQ P+ + +G K D++SSS V + A+ + + A
Sbjct: 793 TNSGKEQSVIQPPSGISSGGNKHVDAASSSDGDPRVGAEAGGAMQGDTPPQTPVDTPDTA 852
Query: 346 EDNKLNDDDSASSSGSASS 364
+ N D A +A++
Sbjct: 853 DANTPTATDVAQVGPAATT 871
>M.Javanica_Scaff15211g071799 on XP_811406 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 924
Score = 25.0 bits (53), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 32/79 (40%)
Query: 286 TNDNEEQREELKPNPLKTGSRKSNDSSSSSSSSENVEKQVNNAINEEEKEMIKKENEKKA 345
T+ +EQ E P+ + +G K D +SSS V + A+ + + A
Sbjct: 774 TSLGKEQSEIQPPSVISSGGSKHVDVASSSDGDPTVGAEAGGAMQGDTPPQTPVDTPDTA 833
Query: 346 EDNKLNDDDSASSSGSASS 364
N D+A +A++
Sbjct: 834 GANAPTATDTAQVGPTATT 852
>M.Javanica_Scaff15211g071799 on XP_001609167 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1317
Score = 25.0 bits (53), Expect = 9.7, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 62/163 (38%), Gaps = 20/163 (12%)
Query: 62 IENEMAKNENDVSGKVNEKVKSSNLNDKKGFEDEEGESIKKMKNRNEG-KQELINNFPFL 120
+ E+A +V K+ E V N ++ E +GE I K+K++ EG K EL+ L
Sbjct: 657 VNGEVALKVKEVLQKIGEVVVQLG-NAQEALEGRKGEEITKVKDKLEGAKGELVKAQKEL 715
Query: 121 RDVPNEEVKKFQQISSNPNLTKGELEVERQQWAEKQNTDV--------------MNAFYE 166
EV+K + N L + ++E + N + N E
Sbjct: 716 E----AEVQKVNKGGLNGKLGAAKNKLEELTRNGRSNGKLGEVVQKLGGDADPGKNKISE 771
Query: 167 WKAKIEESKKQEKRKLEDRLNLFTEGMKNILSKIEEIIDDKGI 209
K+ E K E N +G K +LS +DD I
Sbjct: 772 AINKVYEVLTLLKEWSESEGNEMKQGAKEVLSDFAAGLDDNYI 814
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13154g066611
(82 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.6
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 23 2.8
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.9
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.1
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.2
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.3
AAK07771 MSA-1 (Invasion) [Babesia bovis] 22 4.5
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.4
AAK07772 MSA-1 (Invasion) [Babesia bovis] 22 9.5
>M.Javanica_Scaff13154g066611 on XP_001351321 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3467
Score = 23.1 bits (48), Expect = 2.6, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 20 SIARSDSEDGFPPP 33
S+ D EDG PPP
Sbjct: 1942 SVRSEDGEDGPPPP 1955
>M.Javanica_Scaff13154g066611 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 23.1 bits (48), Expect = 2.8, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 48 GARPNGFGGGDGENGGPEESGGRGGG 73
G R N G+N G ESG RG G
Sbjct: 469 GGRINFKNVNSGKNSGGGESGDRGKG 494
>M.Javanica_Scaff13154g066611 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 22.7 bits (47), Expect = 3.9, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 40 KDSNGGRFGARPNGFGGGDGENGGPEESGG 69
KD++GG G GENGG ++ G
Sbjct: 472 KDNDGGTIHFETVGTTTTIGENGGTSDTSG 501
>M.Javanica_Scaff13154g066611 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 22.7 bits (47), Expect = 4.1, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 52 NGFGGGDGENGGPEESGGRG 71
N F G+G NG P + G G
Sbjct: 546 NKFCNGNGGNGAPATATGGG 565
>M.Javanica_Scaff13154g066611 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 22.7 bits (47), Expect = 4.2, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 43 NGGRFGARPNGFGGGDGENGGPEESGGRGGGRGG 76
N R G + GG+ GG ES G GG
Sbjct: 875 NNSRLGWKCIPTSGGEKATGGSGESTGSDATTGG 908
>M.Javanica_Scaff13154g066611 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 22.7 bits (47), Expect = 4.3, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 43 NGGRFGARPNGFGGGDGENGGPEESGGRGGGRGG 76
N R G + GG+ GG ES G GG
Sbjct: 875 NNSRLGWKCIPTSGGEKATGGSGESTGSDATTGG 908
>M.Javanica_Scaff13154g066611 on AAK07771 MSA-1 (Invasion) [Babesia bovis]
Length = 334
Score = 22.3 bits (46), Expect = 4.5, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 20/58 (34%)
Query: 22 ARSDSEDGFPPPPPWLKNKDSNGGRFGARPNGFGGGDGENGGPEESGGRGGGRGGFGG 79
A S G P P +++ N G A PN +G + G FGG
Sbjct: 263 AGQPSSPGSPKEPAGEQSQQENSGSLPAAPNTPSADQPSKPEGNLNGKQAGSSFTFGG 320
>M.Javanica_Scaff13154g066611 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 21.9 bits (45), Expect = 8.4, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Query: 37 LKNKDSNGGRFGARPNGFGGGDGENGGPEESGGRGGGRGG 76
L+ K G+ A G G G NGG E G G+G
Sbjct: 974 LQTKAVVDGKANAEGGGQKGARGPNGGTE---GANSGKGA 1010
>M.Javanica_Scaff13154g066611 on AAK07772 MSA-1 (Invasion) [Babesia bovis]
Length = 339
Score = 21.6 bits (44), Expect = 9.5, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 9/56 (16%)
Query: 22 ARSDSEDGFPPPPPWLKNKDSNGGRFGARPNG---------FGGGDGENGGPEESG 68
A S G P P +++ N G A PN G G+ G P+ +G
Sbjct: 263 AGQPSSPGSPKEPAGEQSQQENSGSLPAAPNTPSADQPSKPEGNLIGQQGSPKPTG 318
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13258g066892
(64 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13520g067550
(190 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804106 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.39
XP_814246 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.55
XP_813188 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.2
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.3
>M.Javanica_Scaff13520g067550 on XP_804106 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1006
Score = 28.1 bits (61), Expect = 0.39, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 50 ILSDGSRIAEREDMKDYNFLSPKE-SCVLHIEYNNNIIVYFQEDGVC-TVDLIVEDSD-I 106
I+ +GSR+ D + K+ VL ++YNN + VY +C T D VED +
Sbjct: 585 IIFNGSRLTLPAHDNDVEWKPNKKYHVVLQMDYNNGLFVYVDGKRICDTEDYEVEDYEGY 644
Query: 107 LNFFD 111
+F+D
Sbjct: 645 KSFYD 649
>M.Javanica_Scaff13520g067550 on XP_814246 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1002
Score = 27.3 bits (59), Expect = 0.55, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 72 KESCVLHIEYNNNIIVYFQEDGVC-TVDLIVEDSD-ILNFFDISH 114
K VL ++YNN + VY +C T D VED + +F+D S
Sbjct: 603 KYHVVLQMDYNNGLFVYVDGKRICDTEDYEVEDYEGYKSFYDRSQ 647
>M.Javanica_Scaff13520g067550 on XP_813188 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1002
Score = 26.6 bits (57), Expect = 1.2, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 72 KESCVLHIEYNNNIIVYFQEDGVC-TVDLIVED 103
K VL ++YNN + VY +C T D VED
Sbjct: 606 KYHVVLQMDYNNGLFVYVDGKRICDTDDYEVED 638
>M.Javanica_Scaff13520g067550 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 24.3 bits (51), Expect = 6.3, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 75 CVLHIEYNNNIIVYFQEDGVCTVDLIVEDSD 105
C L +YN N+ F ++ C D++ SD
Sbjct: 65 CKLQYDYNTNVTHGFGQEYPCETDIVERFSD 95
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14803g070825
(134 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804956 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.2
XP_813236 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.2
>M.Javanica_Scaff14803g070825 on XP_804956 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 381
Score = 24.6 bits (52), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 30/67 (44%)
Query: 51 LSQASERFLGLEPSINSTQLIFNKEKNFYCFRQNLNSTVHCLGKSKGRKQIKISSKFRRS 110
L+ S+ F E +IF + + N N+ V L + KG + ++ S+ ++
Sbjct: 96 LNVGSDVFAVAEAQCKKDSVIFTGVASQIITKDNANTPVEVLNEVKGTRFLEDGSEVQKK 155
Query: 111 LIEHFRP 117
++ RP
Sbjct: 156 KVDVSRP 162
>M.Javanica_Scaff14803g070825 on XP_813236 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 728
Score = 23.5 bits (49), Expect = 6.2, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 36 KHFLILDGDKFIEDPLSQASERFLGLEPSINSTQLIFNKE---KNFYCFRQNLNST 88
K F+ +DG E+ L SER L L I N KN + + + LNST
Sbjct: 628 KSFVYVDGKSLGEEELPLKSERPLELVSFCFGACGIQNSPVTVKNVFLYNRPLNST 683
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1408g015449
(79 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_827750 VSG (Establishment) [Trypanosoma brucei] 23 1.9
XP_845143 VSG (Establishment) [Trypanosoma brucei] 22 8.9
>M.Javanica_Scaff1408g015449 on XP_827750 VSG (Establishment) [Trypanosoma brucei]
Length = 526
Score = 23.5 bits (49), Expect = 1.9, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 25/49 (51%)
Query: 18 PWSSTYEHRESIRNDLFLRYQRMKRNRIKKISKATEAGEKFYANVESSI 66
P+ ++H + + D + K + +K+S+ T A KF+ ++++
Sbjct: 101 PYKEHWQHWQKLAADPKPETVKFKLEQFRKVSQNTMAKNKFHLIADAAL 149
>M.Javanica_Scaff1408g015449 on XP_845143 VSG (Establishment) [Trypanosoma brucei]
Length = 501
Score = 21.6 bits (44), Expect = 8.9, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 18 PWSSTYEHRESIRNDLFLRYQRMKRNRIKKISKATEAGEKFYANVESSILKILSQHRYTT 77
PW T H SI DL R R+ + K + A + + E I KI+ H T
Sbjct: 347 PWL-TIPH--SIATDLADRESRIVQAESTKAALKALAEQARKLSREGEIAKIIKGHLQTA 403
Query: 78 H 78
H
Sbjct: 404 H 404
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13247g066868
(114 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.74
XP_001348250 Plasmepsin II (Proteases) [Plasmodium falciparum] 25 1.1
XP_816821 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.0
XP_803409 VSG (Establishment) [Trypanosoma brucei] 23 4.4
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.4
XP_806454 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.7
XP_815315 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.8
>M.Javanica_Scaff13247g066868 on XP_804548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 691
Score = 25.8 bits (55), Expect = 0.74, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 88 KLRNETIIITSPNTYWKKYNNYTLKIC 114
+L E +II S WK ++NY IC
Sbjct: 391 RLVGELMIIKSVVRSWKNWDNYLSSIC 417
>M.Javanica_Scaff13247g066868 on XP_001348250 Plasmepsin II (Proteases) [Plasmodium falciparum]
Length = 453
Score = 25.0 bits (53), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 32 HFSIFDYDNASNNITLSE 49
+F++FDYDN S I L++
Sbjct: 433 YFTVFDYDNQSVGIALAK 450
>M.Javanica_Scaff13247g066868 on XP_816821 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 782
Score = 23.5 bits (49), Expect = 4.0, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 41 ASNNITLSEVHNSLQDTKKMLSQVQQSLDKQNKTLSEFRTAILENQIKLRNETIIITSPN 100
AS +TL++ + DT K+ +QV + +NK + A ++Q + + + ++ P
Sbjct: 127 ASELLTLTDQESKELDTNKLKTQVLEECSAENKDCASQTGAQKDSQSR---KKVRVSRPT 183
Query: 101 TYWK 104
T K
Sbjct: 184 TVVK 187
>M.Javanica_Scaff13247g066868 on XP_803409 VSG (Establishment) [Trypanosoma brucei]
Length = 501
Score = 23.5 bits (49), Expect = 4.4, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 45 ITLSEVHNSLQDTKKMLSQV 64
+TL N+L+D K ML Q+
Sbjct: 288 LTLDTTENALEDPKAMLKQL 307
>M.Javanica_Scaff13247g066868 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 23.5 bits (49), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 9 LQRDNYFEALKEYIENLRMFYIHHFSIFDYDNASNNITLSEVHNSLQDTKKMLSQVQQSL 68
+ RDN E K +I + IH ++ + S NI +S NS+ DTK + + V +
Sbjct: 1950 MSRDNMEE--KPFITS-----IHDRDLYTGEEISYNINMST--NSMDDTKYVSNNVYSGI 2000
Query: 69 DKQNKTLS 76
D N TLS
Sbjct: 2001 DLINDTLS 2008
>M.Javanica_Scaff13247g066868 on XP_806454 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 694
Score = 23.5 bits (49), Expect = 4.7, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 88 KLRNETIIITSPNTYWKKYNNYTLKIC 114
+L E +II S WK +++Y IC
Sbjct: 391 RLVGELMIIKSVLQSWKTWDSYLSSIC 417
>M.Javanica_Scaff13247g066868 on XP_815315 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 22.3 bits (46), Expect = 9.8, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 41 ASNNITLSEVHNSLQDTKKMLSQVQQSLDKQNK 73
AS +TL++ + DT K+ +QV + +NK
Sbjct: 128 ASELLTLTDQESKELDTTKLKTQVLEECPAENK 160
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15023g071349
(140 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAF14193 SBP3 (Others) [Babesia bovis] 26 0.97
XP_001609539 variant erythrocyte surface antigen-1, beta subuni... 23 5.5
>M.Javanica_Scaff15023g071349 on AAF14193 SBP3 (Others) [Babesia bovis]
Length = 1089
Score = 25.8 bits (55), Expect = 0.97, Method: Composition-based stats.
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 56 CPCCCKCCC 64
CPC CKC C
Sbjct: 652 CPCKCKCTC 660
Score = 24.3 bits (51), Expect = 3.4, Method: Composition-based stats.
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 56 CPCCCKCCCPC 66
C C CKC C C
Sbjct: 650 CHCPCKCKCTC 660
>M.Javanica_Scaff15023g071349 on XP_001609539 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 884
Score = 23.5 bits (49), Expect = 5.5, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 26 GCGCCCHCCKCCSCCTPC 43
G GCC + K C CT C
Sbjct: 166 GVGCCGNSGKTCHDCTEC 183
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1538g016474
(999 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAA70921 MIC5 (Others) [Toxoplasma gondii] 29 0.79
AAW78148 TRAP (Invasion) [Plasmodium falciparum] 28 2.5
AAW78177 TRAP (Invasion) [Plasmodium falciparum] 28 3.1
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 28 3.2
XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 4.3
AAA29777 TRAP (Invasion) [Plasmodium falciparum] 27 4.7
AAA29770 TRAP (Invasion) [Plasmodium falciparum] 27 4.8
AAW78130 TRAP (Invasion) [Plasmodium falciparum] 27 4.9
AAQ11894 TRAP (Invasion) [Plasmodium falciparum] 27 5.8
AAQ11891 TRAP (Invasion) [Plasmodium falciparum] 27 6.3
XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum] 27 6.6
AAW78159 TRAP (Invasion) [Plasmodium falciparum] 27 6.7
XP_846883 VSG (Establishment) [Trypanosoma brucei] 27 8.6
AAW78146 TRAP (Invasion) [Plasmodium falciparum] 27 8.8
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 27 9.3
AAA29776 TRAP (Invasion) [Plasmodium falciparum] 26 9.8
AAW78132 TRAP (Invasion) [Plasmodium falciparum] 26 9.9
>M.Javanica_Scaff1538g016474 on CAA70921 MIC5 (Others) [Toxoplasma gondii]
Length = 231
Score = 29.3 bits (64), Expect = 0.79, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 785 NEIKEEKGEVEEGEVEEEKKVEEEELKKEEEEEEKETKN--KIRKNKKYNVETKE 837
+E+KE + E++EG VEE K ++ E+ + E++E+KN K+ K++ ++ +E
Sbjct: 132 SEMKEFQEEIKEG-VEETKHEDDPEMTRLMVTEKQESKNFSKMAKSQSFSTRIEE 185
>M.Javanica_Scaff1538g016474 on AAW78148 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%)
Query: 234 RRKYDREVKEENEENIEEGNDEENYEKVEGGKQDNEIEEDINNDGKKSNEEEIEEEEEVD 293
R + D +E EENI + N +E E GK +N D++ + + +I ++E
Sbjct: 305 RPRGDNSAVQEPEENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNPDIPQQEPNI 364
Query: 294 KEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVGED 336
E+ E + +N E+ EE+ D + E++ DN+ N+ D
Sbjct: 365 PEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPND 407
>M.Javanica_Scaff1538g016474 on AAW78177 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%)
Query: 234 RRKYDREVKEENEENIEEGNDEENYEKVEGGKQDNEIEEDINNDGKKSNEEEIEEEEEVD 293
R + D ++ EENI + N +E E GK +N D++ + + + +I E+E
Sbjct: 305 RPRGDNSSVQKPEENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPSNPDIPEQEPNI 364
Query: 294 KEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVGEDGKE 339
E+ E + +N E+ EE+ D + E++ DN+ N+ D E
Sbjct: 365 PEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPNDKSE 410
>M.Javanica_Scaff1538g016474 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 158 SGVPMVSASTITSKNNQKKIIEKEEAEENEIIK-EQKRKKSKRRTNKLGNDEEIREGNVH 216
+G+P A I + + +EK + + I K ++ KK+ + N L N E I + +
Sbjct: 668 TGMPPEMALKILLNDVFLQDMEKAQGDPQHIAKIKELLKKNDEKVNNLSNMETIFDFLLQ 727
Query: 217 EDENEEQEKVNKKRQRRRRKYDREVKEENEENIEEGNDEENYEKVEGGKQDNEIEEDINN 276
E+E + Q+ V+ ++ EE ++ +G + G DN EDI++
Sbjct: 728 EEEQDAQKCVSNNPEKC---------EETQKPPTDGAPGGAGPSPDTGTDDNL--EDIDS 776
Query: 277 DGKKSNEEEIEEEEEVDKEEKENDGEEVDEENEEERDEEDKD 318
DG EE ++ VD+EE E++ V+ +EEE+ E KD
Sbjct: 777 DG-----EEDDDVSHVDEEEPEDN--PVEGSSEEEKQEVVKD 811
>M.Javanica_Scaff1538g016474 on XP_814930 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 938
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 277 DGKKSNEEEIEEEEEVDKEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVGED 336
D K+S + E +++E D E+K+ G+ E+ +E D EDK E+ D+ED++ +
Sbjct: 774 DKKESGDSE-DKKESGDSEDKKGSGDS--EDKKESGDSEDKKESGDSEDKKGSGDGAFTP 830
Query: 337 GKENEDEEDDNNDKDDNELDPTLSITDK 364
N + + T SITD
Sbjct: 831 AVSNATTHTAEEETVNQSASGTFSITDS 858
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 293 DKEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVGEDGKENEDEEDDNNDKDD 352
D E+K+ G+ E+ +E D EDK + D+ED++ E ED KE+ D ED D
Sbjct: 771 DSEDKKESGDS--EDKKESGDSEDKKGSGDSEDKK--ESGDSEDKKESGDSEDKKG-SGD 825
Query: 353 NELDPTLS 360
P +S
Sbjct: 826 GAFTPAVS 833
>M.Javanica_Scaff1538g016474 on AAA29777 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 27.3 bits (59), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 234 RRKYDREVKEENEENIEEGNDEENYEKVEGGKQDNEIEEDINNDGKKSNEEEIEEEEEVD 293
R + D E+ EENI + N +E E GK +N D++ + + +I E+E
Sbjct: 305 RPRGDNFAVEKPEENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNPDIPEQEPNI 364
Query: 294 KEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVGED 336
E+ E + +N E+ EE+ D + E++ DN+ N+ D
Sbjct: 365 PEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPND 407
>M.Javanica_Scaff1538g016474 on AAA29770 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 234 RRKYDREVKEENEENIEEGNDEENYEKVEGGKQDNEIEEDINNDGKKSNEEEIEEEEEVD 293
R + D E+ EENI + N +E E GK +N D++ + + +I E+E
Sbjct: 305 RPRGDNFAVEKPEENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNPDIPEQEPNI 364
Query: 294 KEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVGED 336
E+ E + +N E+ EE+ D + E++ DN+ N+ D
Sbjct: 365 PEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPND 407
>M.Javanica_Scaff1538g016474 on AAW78130 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%)
Query: 234 RRKYDREVKEENEENIEEGNDEENYEKVEGGKQDNEIEEDINNDGKKSNEEEIEEEEEVD 293
R + D E+ EENI + N +E E GK +N D++ + + +I ++E
Sbjct: 305 RPRGDNFAVEKPEENIIDNNPQEPSPNPEEGKDENPNGFDLDENPENPPNPDIPQQEPNI 364
Query: 294 KEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVGED 336
E+ E + +N E+ EE+ D + E++ DN+ N+ D
Sbjct: 365 PEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPND 407
>M.Javanica_Scaff1538g016474 on AAQ11894 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 234 RRKYDREVKEENEENIEEGNDEENYEKVEGGKQDNEIEEDINNDGKKSNEEEIEEEEEVD 293
R + D E+ EENI + N +E E GK +N D++ + + +I E+E
Sbjct: 305 RPRGDNFAVEKPEENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNPDIPEQEPNI 364
Query: 294 KEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVGED 336
E+ E + +N E+ EE+ D + E++ DN+ N+ D
Sbjct: 365 PEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPND 407
>M.Javanica_Scaff1538g016474 on AAQ11891 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 234 RRKYDREVKEENEENIEEGNDEENYEKVEGGKQDNEIEEDINNDGKKSNEEEIEEEEEVD 293
R + D E+ EENI + N +E E GK +N D++ + + +I E+E
Sbjct: 305 RPRGDNFAVEKPEENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNPDIPEQEPNI 364
Query: 294 KEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVGED 336
E+ E + +N E+ EE+ D + E++ DN+ N+ D
Sbjct: 365 PEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPND 407
>M.Javanica_Scaff1538g016474 on XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2109
Score = 26.9 bits (58), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 376 ADKGIKIPGKYGGKEQRQENGEYIPSGKRTLGGTKLKIVDVEKKA 420
D+ K + GG E + + GE PSGK + KL+ ++ A
Sbjct: 889 GDEATKSQSQAGGSEAQPQGGEKSPSGKVSSQSDKLRTAFIQSAA 933
>M.Javanica_Scaff1538g016474 on AAW78159 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 234 RRKYDREVKEENEENIEEGNDEENYEKVEGGKQDNEIEEDINNDGKKSNEEEIEEEEEVD 293
R + D V E+ ENI + N +E E GK +N D++ + + +I E+E
Sbjct: 305 RPRGDNFVVEKPNENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNLDIPEQEPNI 364
Query: 294 KEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVGED 336
E+ E + +N E+ EE+ D + E++ DN+ N+ D
Sbjct: 365 PEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPND 407
>M.Javanica_Scaff1538g016474 on XP_846883 VSG (Establishment) [Trypanosoma brucei]
Length = 525
Score = 26.6 bits (57), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 285 EIEEEEEVDKEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVG-EDGKENEDE 343
+++E + + GE +EE + KD+TE + D++D++ N GK+ ED+
Sbjct: 435 DVDETKVTSQTNAAGTGEASNEETATSGCAKHKDKTECDADKKDDKQNCAFRKGKDVEDD 494
Query: 344 ED 345
+D
Sbjct: 495 KD 496
>M.Javanica_Scaff1538g016474 on AAW78146 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.6 bits (57), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%)
Query: 234 RRKYDREVKEENEENIEEGNDEENYEKVEGGKQDNEIEEDINNDGKKSNEEEIEEEEEVD 293
R + D E+ EENI + N +E E GK +N D++ + + +I E++
Sbjct: 305 RPRGDNFAVEKPEENIIDNNPQEPSPNPEEGKDENPNGFDLDENPENPPNPDIPEQKPNI 364
Query: 294 KEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVGED 336
E+ E + +N E+ EE+ D + E++ DN+ N+ D
Sbjct: 365 PEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPND 407
>M.Javanica_Scaff1538g016474 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.6 bits (57), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%)
Query: 234 RRKYDREVKEENEENIEEGNDEENYEKVEGGKQDNEIEEDINNDGKKSNEEEIEEEEEVD 293
R + D ++ EENI + N +E E GK +N D++ + + +I ++E
Sbjct: 305 RPRGDNFAVQKPEENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPPNPDIPQQEPNI 364
Query: 294 KEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVGED 336
E+ E + +N E+ EE+ D + E++ DN+ N+ D
Sbjct: 365 PEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPND 407
>M.Javanica_Scaff1538g016474 on AAA29776 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.2 bits (56), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%)
Query: 234 RRKYDREVKEENEENIEEGNDEENYEKVEGGKQDNEIEEDINNDGKKSNEEEIEEEEEVD 293
R + D E+ EENI + N +E E GK +N D++ + + +I ++E
Sbjct: 305 RPRGDNFAVEKPEENIIDNNPQEPSPNPEEGKGENPKGFDLDENPENPPNPDIPQQEPNI 364
Query: 294 KEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVGED 336
E+ E + +N E+ EE+ D + E++ DN+ N+ D
Sbjct: 365 PEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPND 407
>M.Javanica_Scaff1538g016474 on AAW78132 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%)
Query: 234 RRKYDREVKEENEENIEEGNDEENYEKVEGGKQDNEIEEDINNDGKKSNEEEIEEEEEVD 293
R + D E+ +ENI + N +E E GK +N D++ + + + +I E+E
Sbjct: 305 RPRGDNFAFEKPKENIIDNNPQEPSPNPEEGKGENPNGFDLDENPENPSNPDIPEQEPNI 364
Query: 294 KEEKENDGEEVDEENEEERDEEDKDETEDNEDEEDNEGNVGED 336
E+ E + +N E+ EE+ D + E++ DN+ N+ D
Sbjct: 365 PEDSEKEVPSDVPKNPEDDREENFDIPKKPENKHDNQNNLPND 407
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1576g016778
(313 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_845138 VSG (Establishment) [Trypanosoma brucei] 25 4.6
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.1
>M.Javanica_Scaff1576g016778 on XP_845138 VSG (Establishment) [Trypanosoma brucei]
Length = 485
Score = 25.4 bits (54), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Query: 147 IINETEIINENYLNNIQNYEDKLLSSYWTEINLIGYKKQLLKKQKVESTEEL 198
+IN E+ ++N L N+ N++ L ++ +G K ++K ++ E+L
Sbjct: 275 VINTIELPDKNALKNLANFDATLAAA-------VGASKPFSGQEKEQAMEKL 319
>M.Javanica_Scaff1576g016778 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 25.4 bits (54), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 250 NFNGYVRKNGFWYTKTQDRQCSNCGVTKTKAWYNSEAGGYC 290
+ N + K G +Y C CGV + + + ++GG C
Sbjct: 479 SLNKNINKEGTFYHSKYCEVCPGCGVERNGSGWEEKSGGTC 519
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15529g072568
(95 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 23 4.6
XP_803417 VSG (Establishment) [Trypanosoma brucei] 23 4.8
AAS90844 Toxomepsin 2 (Protease) [Toxoplasma gondii] 22 5.5
XP_814899 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.0
>M.Javanica_Scaff15529g072568 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 23.1 bits (48), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 9 TSPCNDSQCDESSGKETGKISNSSGFGTYLVSPPPVSFFQKYIKMVSL 56
+SP + + D SSG TG ++ G GT VS I +V+L
Sbjct: 2016 SSPSDSNNNDGSSGDNTGDSNDKKGMGT----GEKVSLAAGVIGLVAL 2059
>M.Javanica_Scaff15529g072568 on XP_803417 VSG (Establishment) [Trypanosoma brucei]
Length = 540
Score = 22.7 bits (47), Expect = 4.8, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 16 QCDESSGKETGKISNSSGFGT 36
QCD +S K T K+S+ + GT
Sbjct: 222 QCDINSAKTTFKLSDGASDGT 242
>M.Javanica_Scaff15529g072568 on AAS90844 Toxomepsin 2 (Protease) [Toxoplasma gondii]
Length = 255
Score = 22.3 bits (46), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 19 ESSGKETGKISNSSGFGTYLVSPPPVSF 46
+ + +E NS FG V PPVSF
Sbjct: 90 QKAHQELLNFHNSQYFGEIQVGTPPVSF 117
>M.Javanica_Scaff15529g072568 on XP_814899 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 827
Score = 22.3 bits (46), Expect = 8.0, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 8 VTSPCNDSQCDESSGKETGKISNSSGFGTYLVSPPPVS 45
VT P S+ E S KE GK+ T++V PVS
Sbjct: 370 VTLPVYSSKDGEGSEKEKGKLHLWLTDNTHIVDIGPVS 407
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1390g015304
(66 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805061 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.5
>M.Javanica_Scaff1390g015304 on XP_805061 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 21.6 bits (44), Expect = 6.5, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 26 GTYISDRRHLRKKRVVSFDSARRDESTHED 55
GT + + KK V+F+ + R+ S H D
Sbjct: 565 GTLLFGLSYTHKKWEVTFNESLRNPSVHYD 594
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16018g073670
(260 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAC48311 TRAP C-1 (Adhesin) [Cryptosporidium parvum] 33 0.008
AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei] 29 0.23
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 29 0.28
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.53
XP_001350582 PTRAMP (Adhesin) [Plasmodium falciparum] 28 0.71
XP_966151 TLP (Invasion) [Plasmodium falciparum] 27 1.0
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.7
XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.1
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 25 4.2
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.0
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.0
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.2
XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum] 25 5.8
XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.2
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.3
XP_807593 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.4
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 25 8.5
XP_807499 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 8.8
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 24 10.0
>M.Javanica_Scaff16018g073670 on AAC48311 TRAP C-1 (Adhesin) [Cryptosporidium parvum]
Length = 255
Score = 33.5 bits (75), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 18/86 (20%)
Query: 24 SSRCVVSKWRQWGECQGDCEFALRVRNRDVIKPPFPEKDEKTLQMFLRECPPLYQVEQCQ 83
++ C VS W W C G C +R R R V+ FP D + CP L + C
Sbjct: 151 ATTCTVSTWSSWTTCSGVCG-EMRSRTRSVLS--FPRYDHE-------YCPHLIEYSNCV 200
Query: 84 PRECLDESPFNRVPTDTTQNKTKILN 109
N+ P + Q IL
Sbjct: 201 VE--------NKCPENCPQYGVSILG 218
>M.Javanica_Scaff16018g073670 on AAR88085 TbcatB (Cysteine proteases) [Trypanosoma brucei]
Length = 340
Score = 29.3 bits (64), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 188 ACCRSIRQKCTNGRKPAQLTRWYRKKG--EQFCRPYKYPFCE 227
ACC C NG P + ++ G +C+PY +P C
Sbjct: 153 ACCSDCGDGC-NGGDPDRAWAYFSSTGLVSDYCQPYPFPHCS 193
>M.Javanica_Scaff16018g073670 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 29.3 bits (64), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 32 WRQWGECQGDCEFALRVRNRD 52
+ +W EC C +RVRNRD
Sbjct: 1598 FGEWSECSATCGEGIRVRNRD 1618
Score = 25.8 bits (55), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 8/23 (34%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 30 SKWRQWGECQGDC-EFALRVRNR 51
++W +WG+C C E + ++R R
Sbjct: 1938 NEWEEWGDCSSTCGEGSFKIRKR 1960
Score = 25.8 bits (55), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 32 WRQWGECQGDCEFALRVRN 50
W W EC C +R+R+
Sbjct: 1807 WSDWSECDRTCNVGVRIRH 1825
Score = 25.0 bits (53), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 6/26 (23%), Positives = 12/26 (46%)
Query: 29 VSKWRQWGECQGDCEFALRVRNRDVI 54
+ +W W C C ++ R R ++
Sbjct: 1655 IGEWSDWSSCSKTCGYSTRSRTFTIL 1680
>M.Javanica_Scaff16018g073670 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 28.5 bits (62), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 184 LPNPACCRSIRQKCTNGRKPAQLTRWYRKKGEQFCR 219
NP C + TN Q RW+ + E+FCR
Sbjct: 294 FTNPKCGHGDNEVLTNLDYVPQFLRWFTEWAEEFCR 329
>M.Javanica_Scaff16018g073670 on XP_001350582 PTRAMP (Adhesin) [Plasmodium falciparum]
Length = 352
Score = 27.7 bits (60), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 30 SKWRQWGECQGDCEF--ALRVRNRDVIKP 56
S+W +W C DC+ +++R R+ I P
Sbjct: 246 SEWGEWSNCSMDCDHPDNVQIRERECIHP 274
>M.Javanica_Scaff16018g073670 on XP_966151 TLP (Invasion) [Plasmodium falciparum]
Length = 1371
Score = 27.3 bits (59), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 4 KNDFLQIIILIFALI-VRQSKSSRCVVSKWRQWGECQGDCEFALRVRNRDVI 54
KN F I L + +I S + W +W C C RD +
Sbjct: 240 KNSFYNISALTYEIIKYYDDISINAICHGWSEWSPCSVTCNMGYHFSKRDSL 291
>M.Javanica_Scaff16018g073670 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 26.6 bits (57), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 190 CRSIRQKCTNGRKPAQLTRWYRKKGEQFCRPYKY 223
CR++ TN Q RW+ + E FCR K+
Sbjct: 291 CRNVADVPTNFDYVPQYLRWFEEWAEDFCRKRKH 324
>M.Javanica_Scaff16018g073670 on XP_001347691 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2182
Score = 25.4 bits (54), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 29/117 (24%)
Query: 132 NLEDSFNHINEERKNKSLELIGILKD----EGP--FSTKIDLINNNKKQLKINKIDCKLP 185
N + F I+E+ + S + L+D +GP + + D NNN+K + I + C+
Sbjct: 223 NFKKYFQQIHEDVTSTSGKNRKALRDRYHKDGPDYYQLREDWWNNNRKMVWI-AMTCEA- 280
Query: 186 NPACCRSIRQKCTNGRKPA-------------------QLTRWYRKKGEQFCRPYKY 223
+ R+ C+NG Q RW+ + E FCR K+
Sbjct: 281 --GGSQYFRRTCSNGISETNNKCRCTIETVPTYFDYVPQYLRWFEEWAEDFCRKKKH 335
>M.Javanica_Scaff16018g073670 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 25.4 bits (54), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Query: 182 CKLPNPACCRSIRQKCTNGRKPA------QLTRWYRKKGEQFCR 219
C N A + C NG P Q RW+ + E FCR
Sbjct: 291 CGSGNNATLARDKCTCNNGDVPTYFDYVPQYLRWFEEWAEDFCR 334
>M.Javanica_Scaff16018g073670 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 25.0 bits (53), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 181 DCKLPNPACCRSIRQKCTNGRKPAQLTRWYRKKGEQFCR 219
D N C + TN Q RW+ + E+FCR
Sbjct: 286 DQTFSNDYCGHGEHEVLTNLDYVPQFLRWFEEWAEEFCR 324
>M.Javanica_Scaff16018g073670 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 25.0 bits (53), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 181 DCKLPNPACCRSIRQKCTNGRKPAQLTRWYRKKGEQFCR 219
D N C + TN Q RW+ + E+FCR
Sbjct: 286 DQTFSNDYCGHGEHEVLTNLDYVPQFLRWFEEWAEEFCR 324
>M.Javanica_Scaff16018g073670 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 25.0 bits (53), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 205 QLTRWYRKKGEQFCRPYKYPFCEDSMER 232
Q RW+ + E FCR KY E+++E+
Sbjct: 310 QYLRWFEEWAEDFCRKRKYKL-ENAIEK 336
>M.Javanica_Scaff16018g073670 on XP_001349434 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2109
Score = 25.0 bits (53), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 6/33 (18%)
Query: 197 CTNGRKPA------QLTRWYRKKGEQFCRPYKY 223
C NG P Q RW+ + E FCR K+
Sbjct: 292 CINGDPPTYFDYVPQYLRWFEEWAEDFCRKRKH 324
>M.Javanica_Scaff16018g073670 on XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 822
Score = 24.6 bits (52), Expect = 7.2, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 9 QIIILIFALIVRQSKSSRCVVSKWRQW 35
++ L+FA +V + + + VV W++W
Sbjct: 394 EVYSLVFARLVGELRLIKSVVQSWKKW 420
>M.Javanica_Scaff16018g073670 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 24.6 bits (52), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 40/112 (35%), Gaps = 24/112 (21%)
Query: 132 NLEDSFNHINEERKNKSLELIGIL-------KDEGPFSTKIDLINNNK----KQLKINKI 180
NL+ F HI +E KN L KD + + D + N+ K + N
Sbjct: 213 NLKTIFGHIYDELKNGKTNGEEELQKRYRGDKDNDFYQLREDWWDANRETVWKAITCNAG 272
Query: 181 DCKLPNPACCRS-------IRQKCTNGRKPA------QLTRWYRKKGEQFCR 219
+ P C R + +C G P Q RW+ + E FCR
Sbjct: 273 SYQYSQPTCGRGEIPYVTLSKCQCIAGEVPTYFDYVPQYLRWFEEWAEDFCR 324
>M.Javanica_Scaff16018g073670 on XP_807593 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 715
Score = 24.3 bits (51), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 9 QIIILIFALIVRQSKSSRCVVSKWRQW 35
++ L+FA +V + + + VV W++W
Sbjct: 387 EVYSLVFARLVGELRLIKSVVRSWKKW 413
>M.Javanica_Scaff16018g073670 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 24.6 bits (52), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 205 QLTRWYRKKGEQFCRPYKY 223
Q RW+ + E FCR KY
Sbjct: 315 QYLRWFEEWAEDFCRKRKY 333
>M.Javanica_Scaff16018g073670 on XP_807499 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 24.3 bits (51), Expect = 8.8, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 9 QIIILIFALIVRQSKSSRCVVSKWRQW 35
++ L+FA +V + + + VV W++W
Sbjct: 394 EVYSLVFARLVGELRLIKSVVRSWKKW 420
>M.Javanica_Scaff16018g073670 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 24.3 bits (51), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 21/85 (24%)
Query: 157 DEGPFSTKIDLINNNKKQLKINKIDCKLPNPACCRSIRQKCTNGRKPA------------ 204
DE + + D NNN+ + I C P A + R+ C +G +
Sbjct: 241 DENYYKLREDWWNNNRLMVWY-AITCGAPKEA--QYFRKTCGSGERTKDNCRCAIHGVPT 297
Query: 205 ------QLTRWYRKKGEQFCRPYKY 223
Q RW+ + E+FCR K+
Sbjct: 298 YFDYVPQYLRWFEEWAEEFCRLRKH 322
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1295g014527
(50 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum] 22 1.6
>M.Javanica_Scaff1295g014527 on XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2241
Score = 22.3 bits (46), Expect = 1.6, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 33 SDYPCSLHPTNLDND 47
S+ PC PT LD+D
Sbjct: 1684 SETPCENTPTTLDDD 1698
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15583g072678
(73 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803204 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 9.3
>M.Javanica_Scaff15583g072678 on XP_803204 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 700
Score = 21.2 bits (43), Expect = 9.3, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 43 QWTQLSRDSNGRGLNRPWTPLTKN 66
+W L +GL+ PW P K+
Sbjct: 631 KWMLLCDGRENKGLSSPWQPGKKH 654
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14107g069061
(51 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15935g073472
(100 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.1
XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.3
XP_811148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.6
XP_818862 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.3
XP_816751 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.4
XP_804567 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.6
XP_810676 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.6
XP_812068 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.8
XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum] 23 3.1
XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.5
XP_811687 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.8
XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum] 23 5.8
XP_804086 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.0
XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.1
XP_815234 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.8
XP_812850 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.8
XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.1
XP_818892 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.2
>M.Javanica_Scaff15935g073472 on XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 721
Score = 24.6 bits (52), Expect = 1.1, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 1 MSIKLFIFFVFIIKIVNCGNFCGKLQVDEDDNNNN 35
MS LF F + ++ C CG E+D N++
Sbjct: 39 MSRHLFNFAILLLVTTMCCATCGATPAKENDGNSD 73
>M.Javanica_Scaff15935g073472 on XP_818308 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 24.6 bits (52), Expect = 1.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 1 MSIKLFIFFVFIIKIVNCGNFCGKLQVDED 30
MS ++F V ++ ++ C + CG +Q DE+
Sbjct: 39 MSRRVFASAVLLLVVMMCCSTCGGVQADEN 68
>M.Javanica_Scaff15935g073472 on XP_811148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 564
Score = 24.3 bits (51), Expect = 1.6, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 27/48 (56%)
Query: 1 MSIKLFIFFVFIIKIVNCGNFCGKLQVDEDDNNNNDSDERFVGNEGGL 48
MS ++F V ++ ++ C + CG +Q D ++ +++ E N+ G+
Sbjct: 39 MSRRVFTTAVLLLVVMMCCSTCGGVQADVEEPSSDPKFEWKDANDDGV 86
>M.Javanica_Scaff15935g073472 on XP_818862 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 790
Score = 23.9 bits (50), Expect = 2.3, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 1 MSIKLFIFFVFIIKIVNCGNFCGKLQVDEDDNNNN 35
MS ++F V + ++ C CG E+D N++
Sbjct: 39 MSRRVFTSAVLLFVVMMCCATCGATPAKENDGNSD 73
>M.Javanica_Scaff15935g073472 on XP_816751 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 23.9 bits (50), Expect = 2.4, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 72 DNNEEYSTLSDFTENENTNTDYSSDYCSD 100
++ ++STLSD +EN ++ +S+ SD
Sbjct: 881 EDRPQHSTLSDASENMEESSSHSATLTSD 909
>M.Javanica_Scaff15935g073472 on XP_804567 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 704
Score = 23.9 bits (50), Expect = 2.6, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1 MSIKLFIFFVFIIKIVNCGNFCGKLQVDEDDNNNN 35
MS ++F V ++ V C CG E+D N++
Sbjct: 21 MSRRVFASAVLLLLAVMCCATCGAAPAKENDGNSD 55
>M.Javanica_Scaff15935g073472 on XP_810676 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1040
Score = 23.9 bits (50), Expect = 2.6, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 72 DNNEEYSTLSDFTENENTNTDYSSDYCSD 100
++ ++STLSD +EN ++ +S+ SD
Sbjct: 879 EDRPQHSTLSDASENMEESSSHSAPLTSD 907
>M.Javanica_Scaff15935g073472 on XP_812068 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 812
Score = 23.5 bits (49), Expect = 2.8, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 1 MSIKLFIFFVFIIKIVNCGNFCGKLQVDEDDNNNN 35
MS +F V ++ ++ C CG +E+D N+
Sbjct: 39 MSRHVFASAVLLLVMMMCCATCGATSANEEDGKND 73
>M.Javanica_Scaff15935g073472 on XP_001349514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2120
Score = 23.5 bits (49), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 63 EQINGNVGGDNNEEYSTLSDFTENENTNTDYSSDYCSD 100
E+I + GDNN+E + + + T D+ Y D
Sbjct: 1014 EKIKKTLNGDNNQESGSSPSLSGKKTTPKDWWETYGKD 1051
>M.Javanica_Scaff15935g073472 on XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 23.5 bits (49), Expect = 3.5, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 66 NGNVGGDNNEEYSTLSDFTENENTNTDYS 94
+G G DNNE+ L E EN N + S
Sbjct: 425 SGESGDDNNEQGEELIALYERENGNEESS 453
>M.Javanica_Scaff15935g073472 on XP_811687 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 722
Score = 23.1 bits (48), Expect = 3.8, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 1 MSIKLFIFFVFIIKIVNCGNFCGKLQVDEDDNNNN 35
MS LF ++ ++ C + CG E+D N++
Sbjct: 39 MSRHLFYSAALLLVVMMCCSTCGATPARENDGNSD 73
>M.Javanica_Scaff15935g073472 on XP_001347690 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 22.7 bits (47), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 49 HEGDVIDFEEGFGPEQINGNVGGDNNEEYSTLSDFTENENTNTDYSSDYC 98
H G V +F + E+I + EE + DFT++E T Y + YC
Sbjct: 424 HYGSVNEFLKKLNEERICKD-EPKVKEEKADAVDFTKDETNGTFYRTTYC 472
>M.Javanica_Scaff15935g073472 on XP_804086 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 742
Score = 22.3 bits (46), Expect = 7.0, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 72 DNNEEYSTLSDFTENENTNTDYSSDYCSD 100
++ ++STLSD +E+ ++ +S+ SD
Sbjct: 580 EDRPQHSTLSDASEDMEESSSHSATLTSD 608
>M.Javanica_Scaff15935g073472 on XP_807433 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 22.3 bits (46), Expect = 8.1, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 72 DNNEEYSTLSDFTENENTNTDYSSDYCSD 100
++ ++STLSD +E+ ++ +S+ SD
Sbjct: 880 EDRPQHSTLSDASEDMEESSSHSATLTSD 908
>M.Javanica_Scaff15935g073472 on XP_815234 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1032
Score = 22.3 bits (46), Expect = 8.8, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 72 DNNEEYSTLSDFTENENTNTDYSSDYCSD 100
++ ++STLSD +E+ ++ +S+ SD
Sbjct: 877 EDRPQHSTLSDASEDMEESSSHSATLTSD 905
>M.Javanica_Scaff15935g073472 on XP_812850 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1032
Score = 22.3 bits (46), Expect = 8.8, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 72 DNNEEYSTLSDFTENENTNTDYSSDYCSD 100
++ ++STLSD +E+ ++ +S+ SD
Sbjct: 877 EDRPQHSTLSDASEDMEESSSHSATLTSD 905
>M.Javanica_Scaff15935g073472 on XP_818893 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 22.3 bits (46), Expect = 9.1, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 68 NVGGDNNEEYSTLSDFTENENTNTDYSSD 96
+VGG + E+ ++ N+N N D SS+
Sbjct: 806 SVGGQSAEQLASGGSHDVNKNVNVDSSSN 834
>M.Javanica_Scaff15935g073472 on XP_818892 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 22.3 bits (46), Expect = 9.2, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 68 NVGGDNNEEYSTLSDFTENENTNTDYSSD 96
+VGG + E+ ++ N+N N D SS+
Sbjct: 806 SVGGQSAEQLASGGSHDVNKNVNVDSSSN 834
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13956g068686
(361 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805783 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.2
XP_809824 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.2
>M.Javanica_Scaff13956g068686 on XP_805783 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 408
Score = 27.7 bits (60), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 16 SIYADDKEVEKHKVEEETKEKRDDKELTHKVEDETKEKRDDKEKRTEKTITGKKHVEADE 75
S Y D K V + D KE++H DDKE R + ++T K + +
Sbjct: 269 SAYVDGKRVGS---ASWNLDNTDSKEISHFYIGGDGGNADDKESRGDVSVTVKNVLLYNR 325
Query: 76 PKSE 79
P ++
Sbjct: 326 PLND 329
>M.Javanica_Scaff13956g068686 on XP_809824 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 364
Score = 26.6 bits (57), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 69/185 (37%), Gaps = 35/185 (18%)
Query: 13 SIISIYADDKEVEKHKVEEETKEKRDDKELTHKVEDETKEKRDDKEKRTEKTITGKKH-- 70
+ S+Y D + + E D ++H E+ +GK H
Sbjct: 55 GVGSVYVDGTPLWNMSLRNSFNEGLD--AVSHFYFGAYDEQLS----------SGKIHAT 102
Query: 71 ----VEADEPKSETSGADEREKRITAKKPTEKKPVEEV-----SDETREKRTTKEKKPTK 121
+ P +ET ++T P E+KPV S E+ R +PT
Sbjct: 103 VANVFLYNRPLNETEIGALNANKVTIPPP-ERKPVPAAAATSPSVESANDRVNTNTQPTV 161
Query: 122 PADAEESAAEESREKRT-----IPKKEKPKTVEEESKVEDETREKRLTGTPKKTKPADAE 176
P+ A +A + ++ T +P P T E E + E R P++ KPA++E
Sbjct: 162 PSPA--TAGPQQTDQATLNTSSVPSGGAPSTPAEPKSEEPKPAESR----PEEPKPAESE 215
Query: 177 EETPK 181
E PK
Sbjct: 216 SEEPK 220
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff12956g066123
(128 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829761 VSG (Establishment) [Trypanosoma brucei] 23 4.4
XP_803103 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.7
>M.Javanica_Scaff12956g066123 on XP_829761 VSG (Establishment) [Trypanosoma brucei]
Length = 477
Score = 23.5 bits (49), Expect = 4.4, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 27/65 (41%)
Query: 15 TTKVNNSRRTSIISDNNDCCCCYSQKNQKINNKQNQHNNSLLFPKLIIGTQQHQPYLYST 74
TTK + R I ++ D C + KN K + + + +L K ++ + +
Sbjct: 392 TTKKKSKTREQICNEKKDADTCKADKNCKYDETKKEEPQCVLSDKGKQAAKEAESHAEKV 451
Query: 75 GSTYI 79
G T I
Sbjct: 452 GKTTI 456
>M.Javanica_Scaff12956g066123 on XP_803103 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 531
Score = 23.5 bits (49), Expect = 5.7, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 2 FTSIILLLYCFCCTTKVNNSRRTS 25
+++++LLL CC T N+ S
Sbjct: 7 YSAVLLLLVVMCCGTAAVNAEELS 30
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13g000360
(101 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_813578 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.7
AAX07974 alpha-8 giardin (Others) [Giardia duodenalis] 22 7.1
Q4VPP9 Giardin subunit alpha-8 (Others) [Giardia duodenalis] 22 7.1
>M.Javanica_Scaff13g000360 on XP_813578 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 893
Score = 23.1 bits (48), Expect = 4.7, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 37 KEEIETAYHNLVNEMVN-DNGLDAQSKEIKLKDLKEAFKVLSDETSRAR 84
K+E E + + ++++N ++ + + +EI LKD K+ +VL + S+ +
Sbjct: 111 KKEEEDTFTGIASQLLNLEDKTNKEPEEI-LKDAKKDTQVLEKDVSQGK 158
>M.Javanica_Scaff13g000360 on AAX07974 alpha-8 giardin (Others) [Giardia duodenalis]
Length = 255
Score = 22.3 bits (46), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 23 TNYYETLNINCYATKEE 39
T Y+E+L I C+ + E
Sbjct: 62 TGYFESLMIRCWTNRHE 78
>M.Javanica_Scaff13g000360 on Q4VPP9 Giardin subunit alpha-8 (Others) [Giardia duodenalis]
Length = 255
Score = 22.3 bits (46), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 23 TNYYETLNINCYATKEE 39
T Y+E+L I C+ + E
Sbjct: 62 TGYFESLMIRCWTNRHE 78
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15245g071884
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15447g072343
(51 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806431 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.12
XP_808719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.14
XP_816177 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.39
XP_808565 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.48
XP_817994 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.54
XP_815188 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 0.93
XP_811934 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.0
XP_804261 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.1
XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.1
XP_807450 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.1
XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.2
XP_820773 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 1.6
XP_804821 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 1.9
XP_806966 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 1.9
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 22 2.0
XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum] 22 2.1
XP_808213 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.1
XP_820455 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.3
XP_820456 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.3
XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.3
XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.4
XP_819381 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.5
XP_810610 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.5
XP_815493 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.2
XP_816823 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 3.3
XP_802664 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 4.2
>M.Javanica_Scaff15447g072343 on XP_806431 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 25.4 bits (54), Expect = 0.12, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 1 MSKTFIALVIFTIVFVECCVGGRKKQPEPKSTFSNGLPDK 40
MS+ A + +V + CC G E S+ S PDK
Sbjct: 88 MSRRVFASAVLLLVVMVCCGNGGAAATEDTSSASGFSPDK 127
>M.Javanica_Scaff15447g072343 on XP_808719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 25.4 bits (54), Expect = 0.14, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 3 KTFIALVIFTIVFVECCVGGRKKQPEPKSTFSNGLPDK 40
+ F + V+F +V + CC G + S+ S P+K
Sbjct: 42 RVFTSAVLFLLVVMMCCGTGGAASSKDTSSASGSSPEK 79
>M.Javanica_Scaff15447g072343 on XP_816177 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 24.3 bits (51), Expect = 0.39, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 3 KTFIALVIFTIVFVECCVGGRKKQPEPKSTFSNGLPDK 40
+ F + V +V + CC G E S+ S PDK
Sbjct: 42 RVFTSAVPLLLVVMMCCGTGGATATEGTSSASGSSPDK 79
>M.Javanica_Scaff15447g072343 on XP_808565 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 770
Score = 23.9 bits (50), Expect = 0.48, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 1 MSKTFIALVIFTIVFVECCVGGRKKQPEPKSTFSNGLPDKI 41
MS+ A + + + C GG K EP S + L I
Sbjct: 39 MSRHVFASAVLLFLVICCATGGAVKADEPTSVQGSSLEKHI 79
>M.Javanica_Scaff15447g072343 on XP_817994 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 23.9 bits (50), Expect = 0.54, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 3 KTFIALVIFTIVFVECCVGGRKKQ-----PEPKS 31
+ F + V+ ++ + CC G +Q P+P+S
Sbjct: 42 RVFTSAVLLLLIMMMCCNAGGAQQTIKAAPDPRS 75
>M.Javanica_Scaff15447g072343 on XP_815188 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 862
Score = 23.1 bits (48), Expect = 0.93, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 5 FIALVIFTIVFVECCVGGRKKQPEPKS 31
F AL++ +V + C GG + PE S
Sbjct: 45 FSALLLVLVVMMCCNAGGAAEAPEQAS 71
>M.Javanica_Scaff15447g072343 on XP_811934 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 870
Score = 23.1 bits (48), Expect = 1.0, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 1 MSKT-FIALVIFTIVFVECC-VGGRKKQPEPKS 31
MS++ F + V+ +V + CC GG + EP S
Sbjct: 39 MSRSVFASAVLLLLVVMMCCGTGGGAQAAEPSS 71
>M.Javanica_Scaff15447g072343 on XP_804261 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 268
Score = 22.7 bits (47), Expect = 1.1, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 1 MSKTFIALVIFTIVFVECC-VGG 22
MS+ A + ++FV CC +GG
Sbjct: 39 MSRRVFASAVLLLLFVTCCGIGG 61
>M.Javanica_Scaff15447g072343 on XP_817877 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 900
Score = 22.7 bits (47), Expect = 1.1, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 5 FIALVIFTIVFVECC-VGGRKKQPEPKS 31
F + V+ IV + CC GG + PE S
Sbjct: 44 FFSSVLLLIVVMMCCNAGGAAEAPEQPS 71
>M.Javanica_Scaff15447g072343 on XP_807450 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 810
Score = 22.7 bits (47), Expect = 1.1, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 1 MSK-TFIALVIFTIVFVECCVGGRKKQPEPKS 31
MS+ F + V+ +V + C GG + EP S
Sbjct: 39 MSRHVFTSAVLLLVVMMCCSTGGGAQADEPAS 70
>M.Javanica_Scaff15447g072343 on XP_812697 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 911
Score = 22.7 bits (47), Expect = 1.2, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 5 FIALVIFTIVFVECCVGGRKKQPEPKSTFSNG 36
+ A++I +V + C GG EP S+G
Sbjct: 45 YSAVLILLVVMMCCNTGGAAAAEEPSQGASSG 76
>M.Javanica_Scaff15447g072343 on XP_820773 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 22.3 bits (46), Expect = 1.6, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 3 KTFIALVIFTIVFVECCVGGRKKQPEPKSTFSNGLPDK 40
+ F V+F +V + C G E S+ S PDK
Sbjct: 42 RVFTYAVLFLLVVMMFCGTGGATATEGTSSASGSSPDK 79
>M.Javanica_Scaff15447g072343 on XP_804821 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 731
Score = 22.3 bits (46), Expect = 1.9, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 3 KTFIALVIFTIVFVECCVGGRKKQPEPKSTFSNGLPDK 40
+ F + V+ +V + CC G E ++ P+K
Sbjct: 43 RVFTSAVLLLLVVMMCCGSGGAAATEKPTSVEGTSPEK 80
>M.Javanica_Scaff15447g072343 on XP_806966 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 22.3 bits (46), Expect = 1.9, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 3 KTFIALVIFTIVFVECCVGGRKKQPEPKSTFSNGLPDK 40
+ F + V+ +V + CC G E ++ P+K
Sbjct: 43 RVFTSAVLLLLVVMMCCGSGGAAATEKPTSVEGTSPEK 80
>M.Javanica_Scaff15447g072343 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 22.3 bits (46), Expect = 2.0, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 15/44 (34%)
Query: 3 KTFIALVIFTIVFVECCVGGRKKQPEPKSTFSNGLPDKITNKYT 46
KTFI LV+ +P + TF+ D TNK T
Sbjct: 2759 KTFIELVL---------------EPSKRDTFNTSSGDTFTNKLT 2787
>M.Javanica_Scaff15447g072343 on XP_001349032 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2267
Score = 21.9 bits (45), Expect = 2.1, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 14 VFVECCVGGRKKQPEPKSTFSNGLPDK----ITNKYTYLSAF 51
++ E GG +++ +S + NG K + N+Y + F
Sbjct: 407 IYTEGASGGSRQRRNVRSNYDNGYEKKFYKELKNRYGSVETF 448
>M.Javanica_Scaff15447g072343 on XP_808213 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 819
Score = 21.9 bits (45), Expect = 2.1, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 1 MSKTFIALVIFTIVFVECCVGGRKKQPEPKSTFSNGLPDKI 41
MS+ A + + V C G E S+ S P+K+
Sbjct: 39 MSRRVFASAVLLFLVVMMCCGSGAATAEDASSASGSSPEKL 79
>M.Javanica_Scaff15447g072343 on XP_820455 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 21.9 bits (45), Expect = 2.3, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 3 KTFIALVIFTIVFVECCVGG 22
+ F + V+ +V + CC GG
Sbjct: 42 RVFTSAVLLLLVVMMCCSGG 61
>M.Javanica_Scaff15447g072343 on XP_820456 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 769
Score = 21.9 bits (45), Expect = 2.3, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 3 KTFIALVIFTIVFVECCVGG 22
+ F + V+ +V + CC GG
Sbjct: 42 RVFTSAVLLLLVVMMCCSGG 61
>M.Javanica_Scaff15447g072343 on XP_813500 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 898
Score = 21.9 bits (45), Expect = 2.3, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 3 KTFIALVIFTIVFVECCVGGRKKQPEPKSTFSNGLPDKI 41
+ F + V+ +V + CC G E S+ S P+K+
Sbjct: 42 RVFTSAVLLFLVVMMCC-GSGAATAEDASSASGSSPEKL 79
>M.Javanica_Scaff15447g072343 on XP_809580 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 21.9 bits (45), Expect = 2.4, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 3 KTFIALVIFTIVFVECCVGG-RKKQPEPKST 32
+ F + V+ +V + CC GG Q P S+
Sbjct: 42 RVFTSAVLLLLVVMMCCGGGAASSQDMPSSS 72
>M.Javanica_Scaff15447g072343 on XP_819381 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1046
Score = 21.9 bits (45), Expect = 2.5, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 4 TFIALVIFTIVFVECCVGG 22
TF L++F +++V C GG
Sbjct: 45 TFAVLLLFVVMWVCCGSGG 63
>M.Javanica_Scaff15447g072343 on XP_810610 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 199
Score = 21.9 bits (45), Expect = 2.5, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 3 KTFIALVIFTIVFVECCVGGRKKQPEPKSTFSNGLPDK 40
+ F + V+ +V + CC G E ++ P+K
Sbjct: 42 RVFTSAVLLLLVVMMCCGSGGATATEKPTSVEGTSPEK 79
>M.Javanica_Scaff15447g072343 on XP_815493 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 706
Score = 21.6 bits (44), Expect = 3.2, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 3 KTFIALVIFTIVFVECCVGGRKKQPEPKS 31
+ F + V+F +V + CC G E KS
Sbjct: 4 RVFASAVLFLLVVMMCCGRGAAAVVEGKS 32
>M.Javanica_Scaff15447g072343 on XP_816823 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 772
Score = 21.6 bits (44), Expect = 3.3, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 3 KTFIALVIFTIVFVECCVGGRKKQPEP 29
+ F + V+ +V + C GG + EP
Sbjct: 42 RVFTSAVLLLVVMMCCGSGGAAQAAEP 68
>M.Javanica_Scaff15447g072343 on XP_802664 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 367
Score = 21.2 bits (43), Expect = 4.2, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 1 MSKTFIALVIFTIVFVECCVGGRKKQPEPKS 31
+S+ A + + + C GG K EP S
Sbjct: 39 VSRRVFASAVLLFLVICCATGGAVKADEPTS 69
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13597g067757
(94 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.24
XP_829333 VSG (Establishment) [Trypanosoma brucei] 23 2.4
XP_657460 Lgl5 (Adhesin) [Entamoeba histolytica] 23 5.2
XP_001350954 RESA (Others) [Plasmodium falciparum] 22 8.9
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.2
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.8
>M.Javanica_Scaff13597g067757 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 26.6 bits (57), Expect = 0.24, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 11 PNNIADLFENNHEDYTALDNFLDEHCR-GEYNYEEQENIYMD 51
PN + D + +++ D +++D LD+ + E Y+ Q++IY D
Sbjct: 2181 PNQVDDTYVDSNPDNSSMDTILDDLEKYNEPYYDVQDDIYYD 2222
>M.Javanica_Scaff13597g067757 on XP_829333 VSG (Establishment) [Trypanosoma brucei]
Length = 420
Score = 23.5 bits (49), Expect = 2.4, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 10 IPNNIADLFENNHEDYTALDNFLDEHCRGEYNYEE 44
+P+ D+ ENN+E+ +N +GE N E+
Sbjct: 323 VPSVSKDVVENNNENSGVSNNREKRESKGELNEEK 357
>M.Javanica_Scaff13597g067757 on XP_657460 Lgl5 (Adhesin) [Entamoeba histolytica]
Length = 270
Score = 22.7 bits (47), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 38 GEYNYEEQENIYMDRIIKGCLQLEPDNRPTMKAIVRF 74
+YNYE Q+ D +KG + D K VRF
Sbjct: 81 SDYNYETQKQFTTDDDVKGTTRYVMDMEFDDKRSVRF 117
>M.Javanica_Scaff13597g067757 on XP_001350954 RESA (Others) [Plasmodium falciparum]
Length = 654
Score = 21.9 bits (45), Expect = 8.9, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 7 HGRIPNNIADLFENNHEDYTALDNFLDEHCRGEYNYEEQEN 47
H ++ N+ D ++ E Y A + E C N QEN
Sbjct: 162 HYKLKENVVDGKKDCDEKYEAANYAFSEECPYTVNDYSQEN 202
>M.Javanica_Scaff13597g067757 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 21.9 bits (45), Expect = 9.2, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 11 PNNIADLFENNHEDYTALDNFLDE 34
PN + D + +++ D +++D LD+
Sbjct: 2182 PNQVDDTYVDSNPDNSSMDTILDD 2205
>M.Javanica_Scaff13597g067757 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 21.9 bits (45), Expect = 9.8, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 11 PNNIADLFENNHEDYTALDNFLDE 34
PN + D + +++ D +++D LD+
Sbjct: 2136 PNQVDDTYVDSNPDNSSMDTILDD 2159
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15239g071866
(187 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_655415 Hgl (Adhesin) [Entamoeba histolytica] 32 0.018
XP_001612315 variant erythrocyte surface antigen-1, beta subuni... 29 0.14
AAW78162 TRAP (Invasion) [Plasmodium falciparum] 27 0.70
AAW78136 TRAP (Invasion) [Plasmodium falciparum] 27 0.72
XP_001611366 variant erythrocyte surface antigen-1, beta subuni... 27 0.99
XP_001611901 variant erythrocyte surface antigen-1, alpha subun... 27 1.0
AAK82887 BSR4 (Others) [Toxoplasma gondii] 26 1.1
AAW78144 TRAP (Invasion) [Plasmodium falciparum] 26 1.3
AAW78149 TRAP (Invasion) [Plasmodium falciparum] 26 1.3
AAW78154 TRAP (Invasion) [Plasmodium falciparum] 26 1.3
AAQ11892 TRAP (Invasion) [Plasmodium falciparum] 26 1.3
AAW78130 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAW78153 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAW78157 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAW78137 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAW78152 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAW78151 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAW78175 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAW78158 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAA29771 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAW78174 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAW78138 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAW78141 TRAP (Invasion) [Plasmodium falciparum] 26 1.4
AAW78133 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAW78146 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAW78135 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAA29777 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAW78164 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAA29776 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAW78172 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAW78147 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAA29770 TRAP (Invasion) [Plasmodium falciparum] 26 1.5
AAW78148 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAQ11891 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAQ11895 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAW78176 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAW78161 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAQ11894 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAW78165 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAW78139 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAW78134 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAW78173 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAA29774 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAW78168 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAW78150 TRAP (Invasion) [Plasmodium falciparum] 26 1.6
AAW78166 TRAP (Invasion) [Plasmodium falciparum] 26 1.7
AAW78169 TRAP (Invasion) [Plasmodium falciparum] 26 1.7
AAW78171 TRAP (Invasion) [Plasmodium falciparum] 26 1.7
AAW78177 TRAP (Invasion) [Plasmodium falciparum] 26 1.7
AAW78159 TRAP (Invasion) [Plasmodium falciparum] 26 1.7
AAW78132 TRAP (Invasion) [Plasmodium falciparum] 26 1.7
XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.7
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.7
AAW78131 TRAP (Invasion) [Plasmodium falciparum] 26 1.8
AAA29773 TRAP (Invasion) [Plasmodium falciparum] 26 1.8
AAA29775 TRAP (Invasion) [Plasmodium falciparum] 26 1.8
XP_001609450 variant erythrocyte surface antigen-1, alpha subun... 26 1.8
AAA29778 TRAP (Invasion) [Plasmodium falciparum] 26 1.9
AAA29772 TRAP (Invasion) [Plasmodium falciparum] 26 1.9
AAW78160 TRAP (Invasion) [Plasmodium falciparum] 26 1.9
AAW78163 TRAP (Invasion) [Plasmodium falciparum] 26 1.9
AAW78167 TRAP (Invasion) [Plasmodium falciparum] 26 2.0
AAW78156 TRAP (Invasion) [Plasmodium falciparum] 26 2.0
XP_001609667 variant erythrocyte surface antigen-1, alpha subun... 25 2.8
XP_656181 Hgl2 (Adhesin) [Entamoeba histolytica] 25 3.2
XP_001611441 variant erythrocyte surface antigen-1, beta subuni... 25 3.7
XP_001609754 variant erythrocyte surface antigen-1, alpha subun... 25 4.0
XP_001609033 variant erythrocyte surface antigen-1, alpha subun... 24 5.2
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 24 6.6
XP_001609755 variant erythrocyte surface antigen-1, beta subuni... 24 6.8
AAK82885 BSR4 (Others) [Toxoplasma gondii] 24 7.2
AAK82886 BSR4 (Others) [Toxoplasma gondii] 24 7.2
BAC44837 JESEBL/EBA-181 (Adhesin) [Plasmodium falciparum] 24 7.9
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 24 8.4
>M.Javanica_Scaff15239g071866 on XP_655415 Hgl (Adhesin) [Entamoeba histolytica]
Length = 1291
Score = 32.0 bits (71), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 42/96 (43%), Gaps = 14/96 (14%)
Query: 34 NNCTDGICSDKQRCMKENDFCDQRS---ETCC--------TGLMCKDRF-CVPCGGIGTP 81
NNC + +C +KQRC + C + S E C TG MC++R C G
Sbjct: 536 NNCQEYVCDEKQRCSVRDKVCVKTSPYIEMSCYVAKCNLNTG-MCENRLSCDTYSSCGGD 594
Query: 82 CTGATLCCPGTTCQSSQCHTCLGNGASCDPKKPNRC 117
TG+ C TT QC T + NG CD K C
Sbjct: 595 STGSVCKCDSTTNNQCQC-TQVQNGNYCDSNKHQIC 629
>M.Javanica_Scaff15239g071866 on XP_001612315 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1140
Score = 29.3 bits (64), Expect = 0.14, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 77 GIGTPCT-----GATLCCPGTTCQSSQCHTCLGNGASCDPKKPNRCCGGYRCQLTASPT 130
GIG CT G T CC + ++ CH C G S + N+C C+ ++ +
Sbjct: 151 GIGKKCTCPGTRGGTNCC-NSASAATTCHECSTCGTSANGDTANKCYLSAYCKKNSTSS 208
>M.Javanica_Scaff15239g071866 on AAW78162 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.9 bits (58), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE ++ +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYSEEVCNDQ 46
>M.Javanica_Scaff15239g071866 on AAW78136 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.9 bits (58), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE ++ +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYSEEVCNDQ 46
>M.Javanica_Scaff15239g071866 on XP_001611366 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1173
Score = 26.6 bits (57), Expect = 0.99, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 18/75 (24%)
Query: 55 DQRSETCCTGLMCKDRFCVPCGGIGT--PCTGATLCCPGTTCQSSQCHTCLGNGASCDPK 112
++ E C G K + GIG C G T C PG + ++ CH C G S
Sbjct: 138 EKGDECCLKGTSGKSK------GIGKECKCVGGTCCSPGGSAATT-CHDCRTCGTS---- 186
Query: 113 KPNRCCGGYRCQLTA 127
G +C L+A
Sbjct: 187 -----NAGQKCYLSA 196
>M.Javanica_Scaff15239g071866 on XP_001611901 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1211
Score = 26.6 bits (57), Expect = 1.0, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 70 RFCVPCGGIGTPCT---GATLCCPGTTCQSSQCHTC 102
R C C G G+ CT G C GT C+ ++ C
Sbjct: 189 RGCTRCSGGGSDCTCKDGEDQCAVGTECKCAKAGKC 224
>M.Javanica_Scaff15239g071866 on AAK82887 BSR4 (Others) [Toxoplasma gondii]
Length = 255
Score = 26.2 bits (56), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 85 ATLCCPGTTCQS-SQCHTCLGNGASCDPKKPNRCCGGYRCQLTASPTYRRAITLFRIVES 143
AT C T S S T +G CDPKK G +CQ A+ + +TL ++E+
Sbjct: 97 ATFECSATQALSISTIPTTIGQNV-CDPKK---TTNGTKCQFGANDSAGTEVTLKDLLET 152
Query: 144 GR 145
R
Sbjct: 153 DR 154
>M.Javanica_Scaff15239g071866 on AAW78144 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.2 bits (56), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDQ 46
>M.Javanica_Scaff15239g071866 on AAW78149 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.2 bits (56), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDQ 46
>M.Javanica_Scaff15239g071866 on AAW78154 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.2 bits (56), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDQ 46
>M.Javanica_Scaff15239g071866 on AAQ11892 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.2 bits (56), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYHEEVCNDQ 46
>M.Javanica_Scaff15239g071866 on AAW78130 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDQ 46
>M.Javanica_Scaff15239g071866 on AAW78153 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78157 TRAP (Invasion) [Plasmodium falciparum]
Length = 557
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDQ 46
>M.Javanica_Scaff15239g071866 on AAW78137 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78152 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78151 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78175 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYLEEVCNDQ 46
>M.Javanica_Scaff15239g071866 on AAW78158 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYLEEVCNDQ 46
>M.Javanica_Scaff15239g071866 on AAA29771 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78174 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78138 TRAP (Invasion) [Plasmodium falciparum]
Length = 542
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78141 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78133 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78146 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDQ 46
>M.Javanica_Scaff15239g071866 on AAW78135 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 26.2 bits (56), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAA29777 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.2 bits (56), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78164 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 26.2 bits (56), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAA29776 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 26.2 bits (56), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78172 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 26.2 bits (56), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78147 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.8 bits (55), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDQ 46
>M.Javanica_Scaff15239g071866 on AAA29770 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 25.8 bits (55), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78148 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDQ 46
>M.Javanica_Scaff15239g071866 on AAQ11891 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAQ11895 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78176 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78161 TRAP (Invasion) [Plasmodium falciparum]
Length = 554
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAQ11894 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78165 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78139 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYLEEVCNDQ 46
>M.Javanica_Scaff15239g071866 on AAW78134 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78173 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAA29774 TRAP (Invasion) [Plasmodium falciparum]
Length = 559
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78168 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.8 bits (55), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78150 TRAP (Invasion) [Plasmodium falciparum]
Length = 569
Score = 25.8 bits (55), Expect = 1.6, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYLEEVCNDQ 46
>M.Javanica_Scaff15239g071866 on AAW78166 TRAP (Invasion) [Plasmodium falciparum]
Length = 545
Score = 25.8 bits (55), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78169 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 25.8 bits (55), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78171 TRAP (Invasion) [Plasmodium falciparum]
Length = 551
Score = 25.8 bits (55), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78177 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.8 bits (55), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
>M.Javanica_Scaff15239g071866 on AAW78159 TRAP (Invasion) [Plasmodium falciparum]
Length = 539
Score = 25.8 bits (55), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 8 ICLFFLSIFILFQLNNGSIETNNTDENNCTDGICSDK 44
+ + FL F LF +N ++ N DE + +C+D+
Sbjct: 10 LVIVFLIFFDLFLVNGRDVQNNIVDEIKYREEVCNDE 46
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1463g015903
(481 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.0
XP_820473 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.4
XP_819342 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.4
XP_818091 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.5
XP_808513 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.2
XP_808432 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 3.2
XP_812792 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 6.1
>M.Javanica_Scaff1463g015903 on XP_818859 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 867
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 341 IKILILSNFVGENVTDKMKPEEKNKFVETINKTNFNLS 378
+++L S ENVTD + P K ++++TN + S
Sbjct: 780 VRVLAGSESSAENVTDGLSPHTAAKNGTSVSETNHSAS 817
>M.Javanica_Scaff1463g015903 on XP_820473 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 341 IKILILSNFVGENVTDKMKPEEKNKFVETINKTNFNLS 378
+++L S ENVTD++ P K ++ +TN + S
Sbjct: 759 VRVLAGSESSAENVTDELSPHTAAKSDTSVPETNHSAS 796
>M.Javanica_Scaff1463g015903 on XP_819342 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 341 IKILILSNFVGENVTDKMKPEEKNKFVETINKTNFNLS 378
+++L S ENVTD++ P K ++ +TN + S
Sbjct: 738 VRVLAGSESSAENVTDELSPHTAAKSDTSVPETNHSAS 775
>M.Javanica_Scaff1463g015903 on XP_818091 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 828
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 341 IKILILSNFVGENVTDKMKPEEKNKFVETINKTNFNLS 378
+++L S ENVTD++ P K ++ +TN + S
Sbjct: 741 VRVLAGSESSAENVTDELSPHTAAKSDTSVPETNHSAS 778
>M.Javanica_Scaff1463g015903 on XP_808513 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 100
Score = 25.4 bits (54), Expect = 3.2, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 341 IKILILSNFVGENVTDKMKPEEKNKFVETINKTNFNLS 378
+++L S ENVTD++ P K ++ +TN + S
Sbjct: 13 VRVLAGSESSAENVTDELSPHTAAKNDTSVPETNHSAS 50
>M.Javanica_Scaff1463g015903 on XP_808432 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 831
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 341 IKILILSNFVGENVTDKMKPEEKNKFVETINKTNFNLS 378
+++L S ENVTD++ P K ++ +TN + S
Sbjct: 744 VRVLAGSESSAENVTDELSPRTAAKNDTSVPETNHSAS 781
>M.Javanica_Scaff1463g015903 on XP_812792 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 19/141 (13%)
Query: 104 TKKEAIDKAKSHLWFY-------IECV--DGFFIQTKTKNKHKKQMSDTNKQPKFKGIFQ 154
++K+ +K + HLW I V DG + +K D NK+ + +++
Sbjct: 390 SEKDGNEKGELHLWLTDNTHIVDIGSVSDDGDEEVAASSLLYKSGTGD-NKKEELIALYE 448
Query: 155 LNEGSENYKNLLRSFLLTKPLYIATLMYKTLKEYDTHSFLEIVSTQKLEE---------L 205
+GSE + S LLT+ L + T KE D L S E+ +
Sbjct: 449 KKKGSEKTSPGMVSVLLTEQLKRVKKVLATWKEVDGRVSLLCTSLIAQEDRSTDTACSAV 508
Query: 206 KVSLKLMAVLYPNFKEIKFLD 226
+V+ L+ L NF + ++D
Sbjct: 509 EVTDGLVGFLSGNFSDGTWMD 529
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14455g069938
(1207 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_818662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 1.5
XP_817719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 5.1
>M.Javanica_Scaff14455g069938 on XP_818662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 23/242 (9%)
Query: 761 SSDDSDEGDESVSDNSDEDENIEDDDEKDDVE--EEESGEEDEDDQEDESEDED-DEDDE 817
+S + G SVS+ + E+ E+ ++D+ + EES ++ +++ +S D D +
Sbjct: 761 ASSSTVVGGASVSEPATATESAENSRQEDNAQFHPEESVQQGTLNEDYKSMQRDSDLQPQ 820
Query: 818 EDESEDEEDDSDEDESGDDDDEEDRSSDEDDDESGEEDDEDDEDGRVIEDESDEDNNSDV 877
E S + +D + S + D+E +E G +D DE + SD D ++
Sbjct: 821 ELLSAESTGVTDVEGSAESYDKEQ------PEEEGGTNDRSDESTSSVGASSDMDTATET 874
Query: 878 NDSDENSEEDVEESSEDEDEES--------EEDEDEEESDDDEESEEDEDESDDEESEED 929
DS ++ E S+E++D S E+ E D + E D S +
Sbjct: 875 VDSGHQVQQSTELSTENDDVRSTGTGTTGAEQSLCLEAGDGNSERAMGSDSSLTPSKSDA 934
Query: 930 EDEEESDDDEESEEDEDEEESDDDEESEDAEESGEDDDDD-----HISEES-SEEKSDSG 983
E + D S D E S+D +E ++ + + IS ES + SD+G
Sbjct: 935 EPTSAENTDNISRTDGAEFSSEDGKEVPQTVDTAPGNTNTTPGEIMISLESNATAPSDAG 994
Query: 984 IV 985
I+
Sbjct: 995 IL 996
>M.Javanica_Scaff14455g069938 on XP_817719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 791 VEEEESGEEDEDDQEDESEDEDDEDDEEDESEDEEDDSDEDESGDDDDEEDRSSDEDDDE 850
VEE+ +G+ D SE + +E E E EDD+DE E G + ++
Sbjct: 725 VEEQPTGQVTSTDVSVASESKSEESAASYE-ELTEDDTDEQEEGIVNGPVP-AAPSSTLV 782
Query: 851 SGEEDDEDDEDGRVIEDESDEDNNSDVNDSDENSE-EDVEESSEDEDEESEEDEDEEESD 909
+G E I +S E++ S+ D+ + SE E +++ +E +ES + D +
Sbjct: 783 AGASISESA-----IAAQSAENSFSE--DNAQPSEGETSWQTTLNEAKESMQ-RDSDVQP 834
Query: 910 DDEESEEDEDESDDEESEEDEDEEESDDD 938
D +SE+ SD E+S E D EE ++D
Sbjct: 835 QDLQSEKLTVFSDVEKSSESNDTEEPEED 863
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14091g069021
(72 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.9
XP_811678 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.0
XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.2
XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.2
XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.2
XP_811677 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.6
XP_812793 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 9.5
>M.Javanica_Scaff14091g069021 on XP_965999 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1325
Score = 23.1 bits (48), Expect = 1.9, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 23 FDPAAEA-TNNDRVTVEWTNTPEGAAKQFRRE 53
FD AEA N+D++ N+ GA FRR+
Sbjct: 106 FDENAEAYCNSDKIRGNENNSNAGACAPFRRQ 137
>M.Javanica_Scaff14091g069021 on XP_811678 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 926
Score = 22.3 bits (46), Expect = 4.0, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 19 SCDAFDPAAEATNNDRVTV 37
+ DA+DP AEA +D V
Sbjct: 830 TADAYDPNAEAMGHDGTAV 848
>M.Javanica_Scaff14091g069021 on XP_820141 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 22.3 bits (46), Expect = 4.2, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 19 SCDAFDPAAEATNNDRVTV 37
+ DA+DP AEA +D V
Sbjct: 831 TADAYDPNAEAMGHDGTAV 849
>M.Javanica_Scaff14091g069021 on XP_809607 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 22.3 bits (46), Expect = 4.2, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 19 SCDAFDPAAEATNNDRVTV 37
+ DA+DP AEA +D V
Sbjct: 825 TADAYDPNAEAMGHDGTAV 843
>M.Javanica_Scaff14091g069021 on XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 21.6 bits (44), Expect = 6.2, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 21 DAFDPAAEATNNDRVTV 37
DA+DP AEA +D V
Sbjct: 838 DAYDPNAEAMGHDGTAV 854
>M.Javanica_Scaff14091g069021 on XP_811677 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 935
Score = 21.6 bits (44), Expect = 7.6, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 19 SCDAFDPAAEATNNDRVTV 37
+ DA+ P AEAT +D V
Sbjct: 840 TADAYAPNAEATGHDGTAV 858
>M.Javanica_Scaff14091g069021 on XP_812793 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 920
Score = 21.2 bits (43), Expect = 9.5, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 19 SCDAFDPAAEATNNDRVTV 37
+ DA+ P AEAT +D V
Sbjct: 824 TADAYAPNAEATGHDGTAV 842
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1490g016112
(417 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812546 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.14
XP_821769 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.14
XP_804432 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.79
XP_802364 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.3
XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.0
XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.4
ABR92024 MSA-1 (Invasion) [Babesia bovis] 26 5.5
XP_812043 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.6
XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.6
XP_811687 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.6
>M.Javanica_Scaff1490g016112 on XP_812546 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 30.8 bits (68), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 37/102 (36%)
Query: 62 AKSVVFFNDVEEDDSEFDQYECFLQLSAQIMTKRGYNFYTVNTTKEIRLRNQEEVEKGED 121
A V +D DD+ +D+Y C N T +RN ++V
Sbjct: 495 AGLVAVLSDAASDDTWYDEYLCL------------------NAT----VRNAKKV----- 527
Query: 122 TIHVYKDGYKIEYNGVRDPDTFVSWLMDVPDDPVTIINDKFD 163
KDG+++ +P + VSW +++PDD V I+ D
Sbjct: 528 -----KDGFQLT-----EPSSRVSWSVNIPDDNVRHISLSHD 559
>M.Javanica_Scaff1490g016112 on XP_821769 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 730
Score = 30.8 bits (68), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 37/102 (36%)
Query: 62 AKSVVFFNDVEEDDSEFDQYECFLQLSAQIMTKRGYNFYTVNTTKEIRLRNQEEVEKGED 121
A V +D DD+ +D+Y C N T +RN ++V
Sbjct: 495 AGLVAVLSDAASDDTWYDEYLCL------------------NAT----VRNAKKV----- 527
Query: 122 TIHVYKDGYKIEYNGVRDPDTFVSWLMDVPDDPVTIINDKFD 163
KDG+++ +P + VSW +++PDD V I+ D
Sbjct: 528 -----KDGFQLT-----EPSSRVSWSVNIPDDNVRHISLSHD 559
>M.Javanica_Scaff1490g016112 on XP_804432 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 799
Score = 28.5 bits (62), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 37/94 (39%)
Query: 62 AKSVVFFNDVEEDDSEFDQYECFLQLSAQIMTKRGYNFYTVNTTKEIRLRNQEEVEKGED 121
A V +D DD+ D+Y C N T +RN +V
Sbjct: 506 AGLVAVLSDAASDDTWIDEYLCL------------------NAT----VRNATKV----- 538
Query: 122 TIHVYKDGYKIEYNGVRDPDTFVSWLMDVPDDPV 155
KDG K+ +PD+ V W +++PDD V
Sbjct: 539 -----KDGLKLT-----EPDSGVIWPVNIPDDKV 562
>M.Javanica_Scaff1490g016112 on XP_802364 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 327
Score = 27.7 bits (60), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 37/94 (39%)
Query: 62 AKSVVFFNDVEEDDSEFDQYECFLQLSAQIMTKRGYNFYTVNTTKEIRLRNQEEVEKGED 121
A V +D DD+ D+Y C N T +RN +V
Sbjct: 25 AGLVAVLSDAASDDTWIDEYLCL------------------NAT----VRNATKV----- 57
Query: 122 TIHVYKDGYKIEYNGVRDPDTFVSWLMDVPDDPV 155
KDG K+ +PD+ V W +++PDD V
Sbjct: 58 -----KDGLKL-----TEPDSGVIWPVNIPDDKV 81
>M.Javanica_Scaff1490g016112 on XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 26.2 bits (56), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 5/29 (17%)
Query: 127 KDGYKIEYNGVRDPDTFVSWLMDVPDDPV 155
KDG+++ P + V WL+++PDD V
Sbjct: 544 KDGFQLT-----KPGSGVMWLVNIPDDKV 567
>M.Javanica_Scaff1490g016112 on XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 830
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 5/29 (17%)
Query: 127 KDGYKIEYNGVRDPDTFVSWLMDVPDDPV 155
KDG+++ P + V WL+++PDD V
Sbjct: 543 KDGFQLT-----KPGSGVMWLVNIPDDKV 566
>M.Javanica_Scaff1490g016112 on ABR92024 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 25.8 bits (55), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Query: 106 KEIRLRN---QEEVEKGEDTI--HVYKDGYKIEYNGV 137
K +R N +E+ EK ED HVYKD ++I NG+
Sbjct: 143 KTLRWNNDIAEEDREKAEDYFKKHVYKDEHEINVNGM 179
>M.Javanica_Scaff1490g016112 on XP_812043 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 807
Score = 25.8 bits (55), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Query: 127 KDGYKIEYNGVRDPDTFVSWLMDVPDDPVTIIN 159
KDG+++ +PD+ V W +++PDD V I+
Sbjct: 542 KDGFQLT-----EPDSGVIWPVNIPDDNVRHIS 569
>M.Javanica_Scaff1490g016112 on XP_820183 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 721
Score = 25.8 bits (55), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 5/29 (17%)
Query: 127 KDGYKIEYNGVRDPDTFVSWLMDVPDDPV 155
KDG+++ +P++ V+W +++PDD V
Sbjct: 527 KDGFQLT-----EPNSGVTWPVNIPDDKV 550
>M.Javanica_Scaff1490g016112 on XP_811687 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 722
Score = 25.4 bits (54), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 127 KDGYKIEYNGVRDPDTFVSWLMDVPDDPV 155
KDG+++ +PD+ V W +++PDD V
Sbjct: 528 KDGFQLT-----EPDSGVMWPVNIPDDKV 551
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13273g066926
(580 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13168g066655
(89 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.6
XP_818519 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.6
XP_001682426 UDP-galactopyranose mutase (Others) [Leishmania ... 23 3.8
>M.Javanica_Scaff13168g066655 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 23.9 bits (50), Expect = 1.6, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 43 TVVGRSLDKCEEAKKNVLLGIKKSTKRRMSNES 75
TVVG ++ + +NVL G K KR +SN +
Sbjct: 11 TVVG---NETHNSARNVLEGFAKDIKRDVSNNA 40
>M.Javanica_Scaff13168g066655 on XP_818519 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 389
Score = 23.1 bits (48), Expect = 3.6, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 11 KVFSFEKIVIIGTGLMGTGIAQVALESGIQQVTVVGRSL 49
K F+ V IGT G+G A + G V +VG S+
Sbjct: 181 KKFTLLVTVTIGTAPAGSGSALMVAVGGAGSVRMVGLSV 219
>M.Javanica_Scaff13168g066655 on XP_001682426 UDP-galactopyranose mutase (Others) [Leishmania
donovani]
Length = 255
Score = 22.7 bits (47), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 14 SFEKIVIIGTGLMGTGIA 31
S +K+VIIG G G G A
Sbjct: 2 SADKVVIIGAGPTGLGAA 19
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13632g067858
(143 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.5
AAK94670 SUB1 (Protease) [Toxoplasma gondii] 23 8.6
>M.Javanica_Scaff13632g067858 on XP_001351319 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2646
Score = 23.9 bits (50), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 11/55 (20%)
Query: 18 YNINFVNACK-CAMQPIEINYCRSDWVAHILPLKKENITETDGFSRDVRYTIEIL 71
Y + AC C + +E W A K+EN ++T + D TIEIL
Sbjct: 511 YRTKYCEACPWCGAEKVE-----GGWKA-----KEENCSQTKDYDPDKTTTIEIL 555
>M.Javanica_Scaff13632g067858 on AAK94670 SUB1 (Protease) [Toxoplasma gondii]
Length = 255
Score = 23.1 bits (48), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 79 SSAACGAYLEIGKEYLIGGNYFDY--DTKKKISSCGLVKNWDDISVEIKEDLNNGKLDKK 136
S+ A G + K+ L+ ++ + + + S+ L+K + EI++++ D++
Sbjct: 18 STNARGLRVRKDKDVLLATSFLSHHGEYQNPTSTYNLIKEIRKVEAEIEDEVETLNRDRR 77
Query: 137 LH 138
LH
Sbjct: 78 LH 79
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1337g014863
(129 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803401 VSG (Establishment) [Trypanosoma brucei] 25 2.1
>M.Javanica_Scaff1337g014863 on XP_803401 VSG (Establishment) [Trypanosoma brucei]
Length = 493
Score = 24.6 bits (52), Expect = 2.1, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 56 RGLYEINSNFSKRSLKDLENATIILHGNTYMNEQRKYSSSIITDLFT 102
R L I N + + K AT L G T N + S+S+ TD+ T
Sbjct: 72 RTLIYIEGNSTNAATKAQRTATAFLGGQTAENLEYYSSTSVATDVTT 118
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15183g071736
(116 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.65
>M.Javanica_Scaff15183g071736 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 25.8 bits (55), Expect = 0.65, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 85 RIRPRSINQTRNPGKGPG 102
R P + Q R PG GPG
Sbjct: 777 RADPHDVQQPRPPGSGPG 794
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1422g015559
(237 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAB51785 gp63 (Invasion) [Leishmania donovani] 25 2.8
CAB51786 gp63 (Invasion) [Leishmania donovani] 25 3.1
CAB51784 gp63 (Invasion) [Leishmania donovani] 25 3.2
CAB51783 gp63 (Invasion) [Leishmania donovani] 25 3.3
>M.Javanica_Scaff1422g015559 on CAB51785 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 25.4 bits (54), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 1 MSEYCSSQNIQVWPSKFDDV 20
+SE C QNI WP+ F +V
Sbjct: 125 LSEKCMEQNITKWPAMFCNV 144
>M.Javanica_Scaff1422g015559 on CAB51786 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 25.4 bits (54), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 1 MSEYCSSQNIQVWPSKFDDV 20
+SE C QNI WP+ F +V
Sbjct: 113 LSEKCMEQNITKWPAMFCNV 132
>M.Javanica_Scaff1422g015559 on CAB51784 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 25.4 bits (54), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 1 MSEYCSSQNIQVWPSKFDDV 20
+SE C QNI WP+ F +V
Sbjct: 115 LSEKCMEQNITKWPAMFCNV 134
>M.Javanica_Scaff1422g015559 on CAB51783 gp63 (Invasion) [Leishmania donovani]
Length = 255
Score = 25.4 bits (54), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 1 MSEYCSSQNIQVWPSKFDDV 20
+SE C QNI WP+ F +V
Sbjct: 112 LSEKCMEQNITKWPAMFCNV 131
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13010g066256
(111 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.6
XP_806668 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.5
XP_807450 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.8
XP_815514 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.0
XP_804421 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.0
XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.4
XP_805005 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.2
>M.Javanica_Scaff13010g066256 on XP_808639 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 949
Score = 23.5 bits (49), Expect = 3.6, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 57 KRVPYRDNGVLAINSVGRRK 76
KR+ ++DNG ++ SVG R+
Sbjct: 214 KRIKWKDNGDVSRISVGERQ 233
>M.Javanica_Scaff13010g066256 on XP_806668 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 779
Score = 23.1 bits (48), Expect = 5.5, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 32 HSPLIKGGVVGFGPSQHYATN 52
HS + G G G ++H+ N
Sbjct: 733 HSKTVAAGATGVGTARHFGAN 753
>M.Javanica_Scaff13010g066256 on XP_807450 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 810
Score = 22.7 bits (47), Expect = 6.8, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 33 SPLIKGGVVGFGPSQHYATN 52
S + GG G G ++H+A N
Sbjct: 765 SESLTGGATGVGTARHFAAN 784
>M.Javanica_Scaff13010g066256 on XP_815514 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 811
Score = 22.7 bits (47), Expect = 7.0, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 33 SPLIKGGVVGFGPSQHYATN 52
S + GG G G ++H+A N
Sbjct: 766 SESLAGGATGVGTARHFAAN 785
>M.Javanica_Scaff13010g066256 on XP_804421 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 864
Score = 22.7 bits (47), Expect = 7.0, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 33 SPLIKGGVVGFGPSQHYATN 52
S + GG G G ++H+A N
Sbjct: 819 SESLAGGATGVGTARHFAAN 838
>M.Javanica_Scaff13010g066256 on XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 793
Score = 22.7 bits (47), Expect = 7.4, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 33 SPLIKGGVVGFGPSQHYATN 52
S + GG G G ++H+A N
Sbjct: 748 SESLAGGATGVGTARHFAAN 767
>M.Javanica_Scaff13010g066256 on XP_805005 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 145
Score = 22.3 bits (46), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 33 SPLIKGGVVGFGPSQHYATN 52
S + GG G G ++H+A N
Sbjct: 100 SESLAGGATGVGTARHFAAN 119
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14255g069434
(163 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.2
>M.Javanica_Scaff14255g069434 on XP_816729 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 890
Score = 25.4 bits (54), Expect = 2.2, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
Query: 79 ILLEGFSEGFFSNLKKAETELRQQTEQFKSIRTKLQTKIECLEKELLQGKQVN 131
I+ G + F AET+ +Q E K ++TK Q LEKE + K+VN
Sbjct: 119 IIFTGIASEFL-----AETKDVEQKEIMKDVKTKTQ----FLEKEDSEEKKVN 162
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13677g067984
(222 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.8
>M.Javanica_Scaff13677g067984 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 26.2 bits (56), Expect = 1.8, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 132 NRRPRKTAGPGKPQEGQKMHVPEFWVQKKPSPWSRPSLFFP 172
NR PRK+ GP + Q+ + + W S +F P
Sbjct: 804 NRIPRKSEGPCYGKNPQRFYTGKDWTHVVQEKTSYKDVFLP 844
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13390g067227
(108 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805943 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.2
XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.8
XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.6
XP_808758 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.3
>M.Javanica_Scaff13390g067227 on XP_805943 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 983
Score = 25.0 bits (53), Expect = 1.2, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 4 ETQSQSQQSKQPTQQPPTLINISTAPILTPESTLNLDQHPSAFNRVGRGINTGIDSSISN 63
E +Q+ +P++ P + AP++TPE+ + P + + + + IS
Sbjct: 711 EVAAQTTNVSEPSRHP------AIAPVVTPEAQQDATSSPRSQHTPAQKSESKSGPVISK 764
Query: 64 QTS 66
QTS
Sbjct: 765 QTS 767
>M.Javanica_Scaff13390g067227 on XP_807074 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 822
Score = 22.7 bits (47), Expect = 7.8, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 49 VGRGIN----TGIDSSISNQTSLQQCGNSSTSSTSTPIG 83
VG G N T +DS +N T SS S++STP+G
Sbjct: 731 VGSGANSTSSTPVDSG-ANSTFSSLLAGSSNSTSSTPVG 768
>M.Javanica_Scaff13390g067227 on XP_001349438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2265
Score = 22.3 bits (46), Expect = 8.6, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 46 FNRVGRGINTGIDSSISNQTSLQQCGNSSTSSTSTPIGLKH 86
+++V +G+ +++ Q SL ++ST+ P GL +
Sbjct: 29 YDQVKKGVAETYKEALTGQLSLATLLGVESASTTDPCGLDY 69
>M.Javanica_Scaff13390g067227 on XP_808758 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 823
Score = 22.3 bits (46), Expect = 9.3, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 36 TLNLDQHPSAFNRVGRGINTGIDSSISNQTS-------LQQCGNSSTSSTSTPIGLKHPP 88
+L +++ P+ G G++ +S T+ + G + ++++TP G K P
Sbjct: 710 SLGVEEQPTG-QVTGTGLSVASESKSEETTAPLVENGDSEDVGTAPVNASTTPGGTKIPS 768
Query: 89 TSTQGTTQQHRMLLE 103
S T +LLE
Sbjct: 769 KSNATTPSDTGILLE 783
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14052g068930
(172 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828099 VSG (Establishment) [Trypanosoma brucei] 25 2.9
>M.Javanica_Scaff14052g068930 on XP_828099 VSG (Establishment) [Trypanosoma brucei]
Length = 527
Score = 25.0 bits (53), Expect = 2.9, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 20 YLNAASDAETDTLSESIDKKPLNSARILTSKFTLSQYAVENMDFVIEYILYNVGDRTALK 79
YL + A T +++SIDK PLN ++ + F + + D + + G +
Sbjct: 349 YLGSDQTAFTARITDSIDKTPLN-LKVRETTFDKTIFETAGTDSAATVLTFLQGKQLIAS 407
Query: 80 VTMDDRNSFPTQSFEIVK 97
T +S P EI K
Sbjct: 408 RTAATASSSPEVRKEISK 425
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13000g066235
(73 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAC24767 Hsp90 (Heat shock protein) [Cryptosporidium parvum] 23 1.8
>M.Javanica_Scaff13000g066235 on AAC24767 Hsp90 (Heat shock protein) [Cryptosporidium parvum]
Length = 255
Score = 23.1 bits (48), Expect = 1.8, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 1 MYFIAHLFLFFSIFFTSILTNSPSELPECPFIDPSK--DLN 39
M F+ HL +FF + + + +P D S+ DLN
Sbjct: 1 MSFLLHLLVFFCLIINLCFGSESTGVPSGATFDESQLGDLN 41
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15635g072797
(173 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum] 25 2.9
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.7
XP_001609040 variant erythrocyte surface antigen-1, alpha subun... 24 5.0
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 24 7.6
XP_828100 VSG (Establishment) [Trypanosoma brucei] 23 8.0
>M.Javanica_Scaff15635g072797 on XP_001349036 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2192
Score = 25.0 bits (53), Expect = 2.9, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 43 GGGGGCSSCGGGGGGCGGGGGGGGCC-GRRKREGKHDRERI-GSDGRTEEKTAVQPHYKA 100
G G S G G G GG C RR+R R+ G DG T+ Q + +
Sbjct: 941 GSGEATKSGATTGSGKDGATGGSICVPPRRRRLYVTPLTRLAGGDGNTQAGETTQGNGAS 1000
Query: 101 DDTP 104
+TP
Sbjct: 1001 TETP 1004
>M.Javanica_Scaff15635g072797 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 24.6 bits (52), Expect = 3.7, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 9/21 (42%)
Query: 47 GCSSCGGGGGGCGGGGGGGGC 67
GC C G G GC G C
Sbjct: 1029 GCKGCMGNGQGCTKDSSDGEC 1049
>M.Javanica_Scaff15635g072797 on XP_001609040 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1335
Score = 24.3 bits (51), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 29 GGGGGGGGCGGGCGGGGGGCSS 50
G G GGGC C GG GC+S
Sbjct: 187 GKPGAGGGCQCQCKGGASGCTS 208
>M.Javanica_Scaff15635g072797 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 23.9 bits (50), Expect = 7.6, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 31 GGGGGGCGGGCGGGGGGCSSCGGGGGGCGGGGGGGG--CCGRRKR 73
GG G C GG + GG G G GG C R+R
Sbjct: 873 GGNNSRLGWKCIPTSGGEKATGGSGESTGSDATTGGSICVPPRRR 917
>M.Javanica_Scaff15635g072797 on XP_828100 VSG (Establishment) [Trypanosoma brucei]
Length = 518
Score = 23.5 bits (49), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 10/27 (37%)
Query: 37 CGGGCGGGGGGCSSCGGGGGGCGGGGG 63
GC GGG + G GC G
Sbjct: 217 ASNGCTSSGGGTKTIGQAMAGCSWANG 243
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1541g016498
(137 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820140 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.5
>M.Javanica_Scaff1541g016498 on XP_820140 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 875
Score = 24.3 bits (51), Expect = 3.5, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 16 KRWHILGYTPTYREPNS 32
K+WH+L T +EP+S
Sbjct: 621 KKWHVLCSDKTTKEPSS 637
Score = 24.3 bits (51), Expect = 3.5, Method: Composition-based stats.
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 62 KRWHILGYTPTYREPNS 78
K+WH+L T +EP+S
Sbjct: 621 KKWHVLCSDKTTKEPSS 637
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14819g070863
(254 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.5
XP_817719 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.5
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.3
>M.Javanica_Scaff14819g070863 on XP_820757 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 912
Score = 26.2 bits (56), Expect = 2.5, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 208 KCIEAHKLNGFANYGEALIKFCNKQKCNGELDT 240
+C EA K NGF L+ +++ GELDT
Sbjct: 114 QCTEAGK-NGFTGIASELLVSADQESLKGELDT 145
>M.Javanica_Scaff14819g070863 on XP_817719 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1053
Score = 25.4 bits (54), Expect = 4.5, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 59 STEHLILNDIQNNNKNEVNETNVSMNTEENTKDFSEENNGFDNRKSDSQIISKNGTENPT 118
+ E LIL N++ + + + + + S N G +R ++ S+NG E P
Sbjct: 919 AEESLILEARDGNSERTMGSDSSLTPSRSDAEPTSAGNTGDVSRTEGDEVSSENGEEVPQ 978
Query: 119 NDSVAGNDINS 129
A + N+
Sbjct: 979 TGDTAPENTNT 989
>M.Javanica_Scaff14819g070863 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 24.3 bits (51), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 45 DTLTFLDFD-TKANFSTEHLILNDIQNNNKNEVNETNVSMNTEENTKDFSEE 95
D +T+ D D K ++ N++ +NN + N+ ++ MN N K+ EE
Sbjct: 2154 DDITYFDIDDEKTPMGDIYVDHNNVNSNNMDVPNKVHIEMNIVNNKKEIFEE 2205
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14452g069931
(103 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.78
XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.86
XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum] 24 2.4
AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.1
AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.2
AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.2
AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.2
AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum] 23 3.3
>M.Javanica_Scaff14452g069931 on XP_001351514 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2201
Score = 25.4 bits (54), Expect = 0.78, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 60 NQRERLRKHFIEALFNENETIIARNRNGVE-LISVIRWIENN 100
N+ ++++KHF + ++ +T++++ RN +E LI I +NN
Sbjct: 1527 NEWDQIKKHFKDRKSDDGDTVVSKVRNFLETLIPRIAPKKNN 1568
>M.Javanica_Scaff14452g069931 on XP_001351515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2181
Score = 25.4 bits (54), Expect = 0.86, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 60 NQRERLRKHFIEALFNENETIIARNRNGVE-LISVIRWIENN 100
N+ ++++KHF + ++ +T++++ RN +E LI I +NN
Sbjct: 1507 NEWDQIKKHFKDRKSDDGDTVVSKVRNFLETLIPRIAPKKNN 1548
>M.Javanica_Scaff14452g069931 on XP_001349207 EBA-175 (Adhesin) [Plasmodium falciparum]
Length = 1462
Score = 23.9 bits (50), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 62 RERLRKHFIEALFNENETIIARNRN 86
+E ++ HFIEA E++ ++ +N N
Sbjct: 201 KETMKDHFIEASKKESQLLLKKNDN 225
>M.Javanica_Scaff14452g069931 on AAL38222 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2976
Score = 23.5 bits (49), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
Query: 52 LKIDISS-SNQRERLRKHFIEALF 74
LK++IS+ +N ++L+K++ EALF
Sbjct: 1909 LKVNISNINNSLDKLKKYYEEALF 1932
>M.Javanica_Scaff14452g069931 on AAL38219 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2969
Score = 23.5 bits (49), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
Query: 52 LKIDISS-SNQRERLRKHFIEALF 74
LK++IS+ +N ++L+K++ EALF
Sbjct: 1898 LKVNISNINNSLDKLKKYYEEALF 1921
>M.Javanica_Scaff14452g069931 on AAL38220 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2957
Score = 23.5 bits (49), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
Query: 52 LKIDISS-SNQRERLRKHFIEALF 74
LK++IS+ +N ++L+K++ EALF
Sbjct: 1896 LKVNISNINNSLDKLKKYYEEALF 1919
>M.Javanica_Scaff14452g069931 on AAL38218 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2977
Score = 23.5 bits (49), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
Query: 52 LKIDISS-SNQRERLRKHFIEALF 74
LK++IS+ +N ++L+K++ EALF
Sbjct: 1906 LKVNISNINNSLDKLKKYYEEALF 1929
>M.Javanica_Scaff14452g069931 on AAL38221 PfNBP1 (Adhesin) [Plasmodium falciparum]
Length = 2965
Score = 23.5 bits (49), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
Query: 52 LKIDISS-SNQRERLRKHFIEALF 74
LK++IS+ +N ++L+K++ EALF
Sbjct: 1902 LKVNISNINNSLDKLKKYYEEALF 1925
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14227g069355
(192 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi] 30 0.13
XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.16
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 27 0.68
XP_807454 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.76
XP_001611205 variant erythrocyte surface antigen-1, beta subuni... 25 2.7
Q6GV23 MPP1 (Protease) [Toxoplasma gondii] 25 2.9
XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.8
XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 4.8
>M.Javanica_Scaff14227g069355 on XP_811521 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 830
Score = 29.6 bits (65), Expect = 0.13, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 61 MPVAALPPAPAVSAAPMPTGRLIPQALPG---APCEPGVECTGGSVCSQ 106
+PV P P V AP P +P A+PG P PG G + +Q
Sbjct: 732 IPVPKRAPEPQVKIAPKPVAPALP-AVPGPREVPAAPGRTTVGRTANTQ 779
>M.Javanica_Scaff14227g069355 on XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 29.3 bits (64), Expect = 0.16, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 61 MPVAALPPAPAVSAAPMPTGRLIPQALPG---APCEPGVECTGGSVCSQ 106
+PV P P V AP P +P A+PG P PG G + +Q
Sbjct: 736 IPVPKRAPEPQVKIAPKPVAPALP-AVPGPREVPAAPGRTTVGRTANNQ 783
>M.Javanica_Scaff14227g069355 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 27.3 bits (59), Expect = 0.68, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Query: 44 GAVGPATCGPLPAGCAAMPVAALPPAPAVSAAPMPTGRLIPQALPGAPCEPGVECTGGSV 103
G+ +T G P + P +P+ S P+ ++ PG+P E S
Sbjct: 780 GSPSESTPGSPSESTPGNPSESTPGSPSESTPGNPS-----ESTPGSPSESTPGSPSEST 834
Query: 104 CSQGICLC 111
G CLC
Sbjct: 835 PCSGTCLC 842
>M.Javanica_Scaff14227g069355 on XP_807454 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 26.9 bits (58), Expect = 0.76, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
Query: 63 VAALPPAPAVSAAPMPTGRLIPQALPGAPCEPGVECTGGS 102
+A +P AP VSA P P+ LP AP V T +
Sbjct: 740 IAPIPIAPTVSAVPG------PRELPAAPGRTTVGTTANT 773
>M.Javanica_Scaff14227g069355 on XP_001611205 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1146
Score = 25.4 bits (54), Expect = 2.7, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 76 PMPTGRLIPQALPGAPCEPGVECTGGSVCSQGICLCPPELVQEGTVCV 123
P+P G + G+P CTG ++ C P+ Q GT+ V
Sbjct: 735 PVPMGWKDKEHFKGSPGTYPAHCTGRTLSHLLEYYCDPDRCQSGTLVV 782
>M.Javanica_Scaff14227g069355 on Q6GV23 MPP1 (Protease) [Toxoplasma gondii]
Length = 255
Score = 25.0 bits (53), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 97 ECTGGSVCSQGICLCPPELVQEGTVC 122
E G SVC QG E ++EGT
Sbjct: 195 ETAGSSVCGQGSHARTAEKLEEGTAS 220
>M.Javanica_Scaff14227g069355 on XP_815706 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 24.6 bits (52), Expect = 4.8, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 48 PATCGPLPAGCAAMPVAALPPAPAVSAAPMPTGRLIPQALPGAPCEP 94
PAT GP P ++ +++P A+S P + P+ P EP
Sbjct: 728 PATAGPQPTDQKSLSASSVPSGGALS-EPAASRPEEPEPAESRPEEP 773
>M.Javanica_Scaff14227g069355 on XP_815707 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 907
Score = 24.6 bits (52), Expect = 4.8, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 48 PATCGPLPAGCAAMPVAALPPAPAVSAAPMPTGRLIPQALPGAPCEP 94
PAT GP P ++ +++P A+S P + P+ P EP
Sbjct: 728 PATAGPQPTDQKSLSASSVPSGGALS-EPAASRPEEPEPAESRPEEP 773
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15112g071565
(67 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806966 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.031
XP_804821 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.033
XP_808800 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.049
XP_816720 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.056
XP_820393 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.056
XP_808678 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 0.077
XP_820389 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.28
XP_822014 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.29
XP_816725 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 0.32
XP_805509 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 0.99
XP_811702 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.0
XP_818190 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.9
XP_821303 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 1.9
XP_812580 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 6.2
>M.Javanica_Scaff15112g071565 on XP_806966 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 28.1 bits (61), Expect = 0.031, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 34 VEATWCAALGRESTHCPQGANSNPLAG 60
V ATW GR S CP A +NP G
Sbjct: 474 VLATWKKVDGRVSKLCPSTAATNPSTG 500
>M.Javanica_Scaff15112g071565 on XP_804821 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 731
Score = 27.7 bits (60), Expect = 0.033, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 34 VEATWCAALGRESTHCPQGANSNPLAG 60
V ATW GR S CP A +NP G
Sbjct: 476 VLATWKKVDGRVSKLCPSTAATNPSTG 502
>M.Javanica_Scaff15112g071565 on XP_808800 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 27.3 bits (59), Expect = 0.049, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 34 VEATWCAALGRESTHCPQGANSNPLAG 60
V ATW GR S CP A +NP G
Sbjct: 472 VLATWKKVDGRVSKLCPSTAATNPSTG 498
>M.Javanica_Scaff15112g071565 on XP_816720 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 782
Score = 27.3 bits (59), Expect = 0.056, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 13/27 (48%)
Query: 34 VEATWCAALGRESTHCPQGANSNPLAG 60
V ATW GR S CP A NP G
Sbjct: 478 VLATWKEVDGRVSKLCPSTAAKNPSTG 504
>M.Javanica_Scaff15112g071565 on XP_820393 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 836
Score = 27.3 bits (59), Expect = 0.056, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 13/27 (48%)
Query: 34 VEATWCAALGRESTHCPQGANSNPLAG 60
V ATW GR S CP A NP G
Sbjct: 532 VLATWKEVDGRVSKLCPSTAAKNPSTG 558
>M.Javanica_Scaff15112g071565 on XP_808678 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 544
Score = 26.9 bits (58), Expect = 0.077, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 13/27 (48%)
Query: 34 VEATWCAALGRESTHCPQGANSNPLAG 60
V ATW GR S CP A NP G
Sbjct: 240 VLATWKEVDGRVSKLCPSTAAKNPSTG 266
>M.Javanica_Scaff15112g071565 on XP_820389 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 774
Score = 25.4 bits (54), Expect = 0.28, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 12/27 (44%)
Query: 34 VEATWCAALGRESTHCPQGANSNPLAG 60
V A W GR S CP A NP G
Sbjct: 470 VLAAWKEVDGRVSKLCPSTAAKNPSTG 496
>M.Javanica_Scaff15112g071565 on XP_822014 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 950
Score = 25.4 bits (54), Expect = 0.29, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 34 VEATWCAALGRESTHCPQGANSNP 57
V ATW GR S CP N++P
Sbjct: 533 VLATWKKVDGRVSKLCPSEKNASP 556
>M.Javanica_Scaff15112g071565 on XP_816725 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 775
Score = 25.0 bits (53), Expect = 0.32, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 12/27 (44%)
Query: 34 VEATWCAALGRESTHCPQGANSNPLAG 60
V TW GR S CP A NP G
Sbjct: 471 VLVTWKEVDGRVSKLCPSTAPKNPSTG 497
>M.Javanica_Scaff15112g071565 on XP_805509 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 777
Score = 23.9 bits (50), Expect = 0.99, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 12/27 (44%)
Query: 34 VEATWCAALGRESTHCPQGANSNPLAG 60
V ATW R S CP A NP G
Sbjct: 474 VLATWKEVDDRVSKLCPSTAARNPSTG 500
>M.Javanica_Scaff15112g071565 on XP_811702 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 776
Score = 23.9 bits (50), Expect = 1.0, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 12/27 (44%)
Query: 34 VEATWCAALGRESTHCPQGANSNPLAG 60
V ATW R S CP A NP G
Sbjct: 473 VLATWKEVDDRVSKLCPSTAARNPSTG 499
>M.Javanica_Scaff15112g071565 on XP_818190 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 807
Score = 23.1 bits (48), Expect = 1.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 34 VEATWCAALGRESTHCPQGANSNPLAG 60
V TW R S CP A +NP G
Sbjct: 487 VLVTWKKVDERVSKLCPSTAATNPSTG 513
>M.Javanica_Scaff15112g071565 on XP_821303 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 808
Score = 23.1 bits (48), Expect = 1.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 34 VEATWCAALGRESTHCPQGANSNPLAG 60
V TW R S CP A +NP G
Sbjct: 487 VLVTWKKVDERVSKLCPSTAATNPSTG 513
>M.Javanica_Scaff15112g071565 on XP_812580 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 213
Score = 21.6 bits (44), Expect = 6.2, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 29 LAGAPVEATWCAALGRESTH 48
+ G+P T ALG E TH
Sbjct: 151 IVGSPEHITILGALGHEITH 170
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1339g014887
(84 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 22 5.3
>M.Javanica_Scaff1339g014887 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 22.3 bits (46), Expect = 5.3, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 54 LTGTLRYLRGVNQGCSELN 72
LTGT++ G Q CS+L+
Sbjct: 768 LTGTVQLENGTCQSCSDLS 786
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15432g072308
(393 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.5
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 26 5.3
XP_806541 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.4
>M.Javanica_Scaff15432g072308 on XP_820143 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 869
Score = 26.9 bits (58), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 8/119 (6%)
Query: 117 DRAYRVQCFYMEADKTVSAQLEVSEITTQFQTQIVPMPVCKYEVKISKKSFNKKKYFTKQ 176
D + + FY+ D + + VS T + P+ + E+ +FN K T
Sbjct: 672 DESKEISHFYIGGDGENADKEGVSVTVTNVL--LYNRPLDEAEMA----AFNPNKAPTPS 725
Query: 177 ILEGGPTGQPIQFAIIGQQVYHKWTCDSETVDTFCA--VVHSCTVDDGNGDTVQILNEE 233
+++G G IQF+ G+ + + S V+ A V + T G G Q+++E+
Sbjct: 726 LVDGSVEGGAIQFSGGGRPEEQRQSLGSSGVNGVSAPTVSSAKTSSGGEGSATQLVSEK 784
>M.Javanica_Scaff15432g072308 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 25.8 bits (55), Expect = 5.3, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 160 VKISKKSF-NKKKYFTKQ---ILEGGPTGQPIQFAIIGQQVYHKWTCDSETVD 208
V+ KK + N KK+F KQ ++EGGP G+ ++ + ++ D T D
Sbjct: 667 VEQKKKEWQNIKKHFDKQTDIVIEGGPLGELSHCGVLEWNLKEEFLKDESTED 719
>M.Javanica_Scaff15432g072308 on XP_806541 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 753
Score = 25.0 bits (53), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 308 AGGAPPAPAAATPAPPPQAPAPANPIS 334
AGG P A+A P + APA P++
Sbjct: 670 AGGVPQTIASAVSGPEKNSAAPAMPMT 696
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff136g002437
(125 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.7
>M.Javanica_Scaff136g002437 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 23.1 bits (48), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 44 AFCSCFGGKGATDDDNED 61
A+C+C G TD N D
Sbjct: 1165 AYCNCMEGTSTTDSSNND 1182
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14454g069935
(328 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829764 VSG (Establishment) [Trypanosoma brucei] 25 5.1
>M.Javanica_Scaff14454g069935 on XP_829764 VSG (Establishment) [Trypanosoma brucei]
Length = 434
Score = 25.4 bits (54), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 158 KTHVGACISLEHLQKVQSFIDGAVNEGAKLLTGGER 193
KT AC + +HLQ + + ID V E + + G++
Sbjct: 31 KTIASACDAADHLQWMINHIDRTVAEQERQIADGQK 66
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15736g073042
(134 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001348165 RESA (Others) [plasmodium falciparum] 29 0.088
AAZ73239 ROP16 (Establishment) [Toxoplasma gondii] 25 1.3
AAY44839 MSA-1 (Invasion) [Babesia bovis] 25 1.5
XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 2.3
Q03077 Lgl2 (Adhesin) [Entamoeba histolytica] 23 8.4
>M.Javanica_Scaff15736g073042 on XP_001348165 RESA (Others) [plasmodium falciparum]
Length = 1085
Score = 28.9 bits (63), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 19 QIKTTSPYEILGISEEATFDEIKKAYKKLSLKYHP 53
+I T Y+ILG+ A +EI + Y KL+ Y+P
Sbjct: 518 EIPDTLYYDILGVGVNADMNEITERYFKLAENYYP 552
>M.Javanica_Scaff15736g073042 on AAZ73239 ROP16 (Establishment) [Toxoplasma gondii]
Length = 255
Score = 25.4 bits (54), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 36 TFDEIKKAY----KKLSLKYHPDKNLDNPGYAH 64
+F+E +KA ++++ PD L NPG H
Sbjct: 27 SFEEAQKASEAAKRQIATLPSPDSTLSNPGSKH 59
>M.Javanica_Scaff15736g073042 on AAY44839 MSA-1 (Invasion) [Babesia bovis]
Length = 274
Score = 25.0 bits (53), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 37 FDEIKKA----YKKLSLKYHPDKNLDNPGYAHDKMVELIWARDSAL----EEANNTNNKL 88
FD I +A Y+K + + D NL++PG H +E EA + + L
Sbjct: 191 FDSIVRAATQFYRKKADANNRDSNLESPGDGHTSGIETGAPGSQPAGQQEPEARSPSGNL 250
Query: 89 LQGAGPSQVNPGSSTWHAGG 108
+ G + P S++ GG
Sbjct: 251 QKPDGSNPSKPAGSSFTCGG 270
>M.Javanica_Scaff15736g073042 on XP_805336 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 931
Score = 24.6 bits (52), Expect = 2.3, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 89 LQGAGPSQVNPGSSTWHAGGSSHQQANEFGSLYSRK 124
+ G G ++ S +++GG++ ++ E +LY +K
Sbjct: 411 VSGDGDDEITASSLLYNSGGNTDEKKEELIALYEKK 446
>M.Javanica_Scaff15736g073042 on Q03077 Lgl2 (Adhesin) [Entamoeba histolytica]
Length = 288
Score = 22.7 bits (47), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 53 PDKNLDNPGYAHDKMVELIWARDSALEEANNTNNKLLQGAGPSQVNPGSSTWH 105
P + D G A+++ +IW ++ L +A T N+ V+P + W+
Sbjct: 154 PKRVHDIRGGANEEATLIIWPKNPPLSDAPGTRNQRF-----VYVHPYPTEWY 201
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15883g073370
(99 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAM47192 Rh4 (Adhesin) [Plasmodium falciparum] 24 1.6
AAM47174 Rh4 (Adhesin) [Plasmodium falciparum] 24 1.6
XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.8
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.0
XP_803104 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.7
XP_829776 VSG (Establishment) [Trypanosoma brucei] 22 7.1
AAM64207 RAP3 (Invasion) [Plasmodium falciparum] 22 8.4
>M.Javanica_Scaff15883g073370 on AAM47192 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1716
Score = 24.3 bits (51), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 33 IEEIEQLVEQHLRSDDCH 50
IE+IE+ V +++ + DCH
Sbjct: 256 IEDIEKKVNEYINNSDCH 273
>M.Javanica_Scaff15883g073370 on AAM47174 Rh4 (Adhesin) [Plasmodium falciparum]
Length = 1711
Score = 24.3 bits (51), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 33 IEEIEQLVEQHLRSDDCH 50
IE+IE+ V +++ + DCH
Sbjct: 256 IEDIEKKVNEYINNSDCH 273
>M.Javanica_Scaff15883g073370 on XP_807986 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1054
Score = 24.3 bits (51), Expect = 1.8, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 9 QDLEPEEEDEAMEGGSNISNNLLDIEEIEQL 39
Q P E +E+M+ GS++ L EE+ +
Sbjct: 816 QQATPNEGNESMQRGSDVQTQDLQAEELTEF 846
>M.Javanica_Scaff15883g073370 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 24.3 bits (51), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 13/59 (22%)
Query: 47 DDCHTAAFWA---EKLLAISR----RQGDRSLSERLPQIANYLIGLKKTSKSLQITAGY 98
DDCH +FW +K LA + +Q + +E L I KK S + GY
Sbjct: 361 DDCHKCSFWCGFYKKWLANQKQEFLKQKKKCENEMLS------ISKKKQSTKYNVYEGY 413
>M.Javanica_Scaff15883g073370 on XP_803104 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 255
Score = 23.1 bits (48), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 4 KFNILQDLEPEEEDEAMEGGSNISNNLLDIEEIEQLVEQHLRSDDCHTAAFWA-----EK 58
K +++ P +EG ++SN+ E+ ++ + R D +AAF A +
Sbjct: 100 KRSVVDTQSPATSGPDLEGTVSLSNSAGQRPLEEEPLKANFRGDGVSSAAFVATTPSSDA 159
Query: 59 LLAISRRQGDRSLSERLPQI 78
A++ GD PQ
Sbjct: 160 AQAVATGSGDTMQGNGSPQT 179
>M.Javanica_Scaff15883g073370 on XP_829776 VSG (Establishment) [Trypanosoma brucei]
Length = 471
Score = 22.3 bits (46), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 37 EQLVEQHLRSDDCHTAAFWAEKLLAISRRQGDRSLSER 74
EQL E + D+ TA W L + + GD S R
Sbjct: 311 EQLSETYGTEDEAVTAKLWKLMLAIPAPKAGDASTKNR 348
>M.Javanica_Scaff15883g073370 on AAM64207 RAP3 (Invasion) [Plasmodium falciparum]
Length = 400
Score = 22.3 bits (46), Expect = 8.4, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 17 DEAMEGGSNISNNLLDIEEIEQLVEQHLRSDDCHTAAFWAEKLLAISRRQGDRS-LSERL 75
DEA+E ++ N+LDIE+ R+ + F+A+ L + R + S +L
Sbjct: 68 DEAIEYLKGLNINVLDIEDHACFA----RAFSVYLLHFYAKDLKMMIRNEEHESFFKNKL 123
Query: 76 PQIANYLIG 84
+I N + G
Sbjct: 124 SEINNIISG 132
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15797g073186
(382 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.2
XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.9
XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.1
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.6
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.7
>M.Javanica_Scaff15797g073186 on XP_804542 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 813
Score = 26.9 bits (58), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 278 ESAGAFYPNDPKLCWVNPSSIQDAEKNGIAHLSFLGKDASASQ 320
E G+ Y + ++C S++++ E GI+H ++G D +++
Sbjct: 673 EKQGSVYVDGQRVCESVQSNLENTESKGISHF-YIGGDGGSAE 714
>M.Javanica_Scaff15797g073186 on XP_812613 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1038
Score = 26.6 bits (57), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 362 NQLYMLIGIYSHRHK 376
N +YML+G YSH+ K
Sbjct: 181 NSVYMLLGNYSHKEK 195
>M.Javanica_Scaff15797g073186 on XP_805179 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 793
Score = 25.4 bits (54), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 281 GAFYPNDPKLCWVNPSSIQDAEKNGIAHLSFLGKDASA 318
G+ Y + ++C S+ ++ E GI+H S G SA
Sbjct: 656 GSVYVDGQRVCESVQSNWENTESKGISHFSIGGDGGSA 693
>M.Javanica_Scaff15797g073186 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 25.4 bits (54), Expect = 6.6, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 11/45 (24%)
Query: 33 NSGVGAPVACTESGAVKG----YKGDNKIAIFKGIPYASAQRWKE 73
N G GAP T G +K Y+GDN +G WKE
Sbjct: 552 NGGNGAPATATGGGQIKNWQCHYEGDNNDNCVEG-------EWKE 589
>M.Javanica_Scaff15797g073186 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.0 bits (53), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 89 FGSSCAQPTNNNGFSGSEDCLFLNVFTKSKKLWPKIWP-GTQEAGTQRS 136
+G +CA + N+ + CL N+ TK+KK P G Q+ Q S
Sbjct: 1580 YGCNCADNSQNSTQNDVVLCLLENLKTKAKKCEENHKPSGNQQQPCQES 1628
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1521g016326
(55 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15113g071568
(295 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 47 8e-07
XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum] 33 0.019
ABR92024 MSA-1 (Invasion) [Babesia bovis] 33 0.020
XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.64
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 27 1.4
XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 2.4
XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.6
XP_813237 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 4.3
XP_813587 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.6
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 25 6.9
XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum] 25 7.6
XP_001608795 variant erythrocyte surface antigen-1, alpha subun... 25 9.1
XP_813586 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.7
>M.Javanica_Scaff15113g071568 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 47.0 bits (110), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 205 PEPTPKQLPPAAPSTPQPGYP--QPPASPSTKPPRNPYPSGP-EPTPKQPGYPQGPASTP 261
P +P + P +PS PG P P SPS P NP S P P+ PG P STP
Sbjct: 762 PPGSPSESTPGSPSESTPGSPSESTPGSPSESTPGNPSESTPGSPSESTPGNPS--ESTP 819
Query: 262 KQP--GYPQAPASPTP 275
P P +P+ TP
Sbjct: 820 GSPSESTPGSPSESTP 835
Score = 47.0 bits (110), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 174 PPAAPSTPQPGYPQ--PPAAPSTKPPRNLYPSGPEPTPKQLPPAAPSTPQPGYPQ--PPA 229
PP +PS PG P P +PS P + S P P + P +PS PG P P
Sbjct: 762 PPGSPSESTPGSPSESTPGSPSESTPGSPSESTPG-NPSESTPGSPSESTPGNPSESTPG 820
Query: 230 SPSTKPPRNPYPSGP 244
SPS P +P S P
Sbjct: 821 SPSESTPGSPSESTP 835
Score = 46.6 bits (109), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 212 LPPAAPSTPQPGYP--QPPASPSTKPPRNPYPSGP-EPTPKQPGYPQGPASTPKQP--GY 266
LPP +PS PG P P SPS P +P S P P+ PG P STP P
Sbjct: 761 LPPGSPSESTPGSPSESTPGSPSESTPGSPSESTPGNPSESTPGSPS--ESTPGNPSEST 818
Query: 267 PQAPASPTPRNVYPSGP 283
P +P+ TP + S P
Sbjct: 819 PGSPSESTPGSPSESTP 835
Score = 42.0 bits (97), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 136 PTPKQPGYPQAPASPTPRNVYPSGPEPSTPGGQVASHKPPAAPSTPQPGYP--QPPAAPS 193
P+ PG P +P P P STPG S P +PS PG P P +PS
Sbjct: 766 PSESTPGSPSESTPGSPSESTPGSPSESTPGN--PSESTPGSPSESTPGNPSESTPGSPS 823
Query: 194 TKPPRNLYPSGP 205
P + S P
Sbjct: 824 ESTPGSPSESTP 835
Score = 41.6 bits (96), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 13/84 (15%)
Query: 141 PGYPQAPASPTPRNVYPSGPEPSTPGGQVASHKPPAAPSTPQPGYP--QPPAAPSTKPPR 198
PG P +P P P STPG +PS PG P P +PS P
Sbjct: 763 PGSPSESTPGSPSESTPGSPSESTPG----------SPSESTPGNPSESTPGSPSESTPG 812
Query: 199 NLYPSGPEPTPKQLPPAAPSTPQP 222
N S P +P + P +PS P
Sbjct: 813 NPSESTP-GSPSESTPGSPSESTP 835
Score = 35.0 bits (79), Expect = 0.005, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 114 SEEETTTEAPP--TPRNLYPSGP-EPTPKQPGYPQAPASPTPRNVYPSGPEPSTPGGQVA 170
S E+T +P TP + S P P+ PG P +P P P STPG
Sbjct: 765 SPSESTPGSPSESTPGSPSESTPGSPSESTPGNPSESTPGSPSESTPGNPSESTPGS--P 822
Query: 171 SHKPPAAPSTPQP 183
S P +PS P
Sbjct: 823 SESTPGSPSESTP 835
Score = 26.9 bits (58), Expect = 1.5, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 98 STTTQSESSEECECGDSEEETTTEAPPTPRNLYPSGPEPTPKQPGYPQAPASPTPRNVYP 157
S +T SE SE + + TP N PS P P P+ T P
Sbjct: 767 SESTPGSPSESTPGSPSESTPGSPSESTPGN--PSESTPGSPSESTPGNPSEST-----P 819
Query: 158 SGPEPSTPG 166
P STPG
Sbjct: 820 GSPSESTPG 828
Score = 26.6 bits (57), Expect = 2.3, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 8/55 (14%)
Query: 195 KPPRNLYPSGPEPTPKQLPPAAPSTPQPGYPQPPASPSTKPP--RNPYP-SGPEP 246
KP N PEP K P P+ + P+ +P KP NP P PEP
Sbjct: 501 KPEEN-----PEPVEKPNPEENPNPVEKPTPEENPNPVEKPTPEENPNPVEKPEP 550
>M.Javanica_Scaff15113g071568 on XP_001349740 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3346
Score = 33.1 bits (74), Expect = 0.019, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 53/143 (37%), Gaps = 14/143 (9%)
Query: 109 CECGDSEEETTTEAPPTPRNLYPSGPEPTPKQPGYPQAPASPTPRNVYPSGPEPSTPGGQ 168
C+C + +E PP P+ S + +PG P P PE ++
Sbjct: 2724 CKCHEKQE------PPPPKVPEDSEDDRERSEPGEDALPVLPPEEIEQEEEPEETS---- 2773
Query: 169 VASHKPPAAPSTPQPGYPQPPAAPSTKPPRNLYPSGPEPTPKQLPPAAPSTPQPGYPQPP 228
V + + P++ G P S +P N +P P Q P A P P+
Sbjct: 2774 VDTTQDEEEPASEGGGPSGSPTEESGEPREN--SDSSDPKPDQNPEANPEQTPILKPEEE 2831
Query: 229 ASPSTKPPRNPYPSGPE--PTPK 249
A P +KPP G PTP+
Sbjct: 2832 APPKSKPPDGDRGVGRSLGPTPR 2854
>M.Javanica_Scaff15113g071568 on ABR92024 MSA-1 (Invasion) [Babesia bovis]
Length = 330
Score = 32.7 bits (73), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 65/155 (41%), Gaps = 31/155 (20%)
Query: 69 EECTLRSCGRVCNRFFNQKGGYDVTEMPESTTTQSESSEECECGDSEE-ETTTEAPPTPR 127
E + VC F NQ+ + ++ ES + + E + EAP +
Sbjct: 172 HEINVNGMAGVCKGFLNQESEF--YKLAESFDAFDKGKYHGRIDNFAEPKNNVEAP---K 226
Query: 128 NLYPSGPEPTPKQPGYPQAPASP----TPRNVYPSGPEPSTPGGQVASHKPPAAPSTPQP 183
L + E K +AP +P P P EP++PGGQ P AP+ PQP
Sbjct: 227 ELVSAIEEAVAK----IKAPTNPENTELPAQAAPGASEPTSPGGQ------PTAPAAPQP 276
Query: 184 GY-----PQPPAAPSTKPPR---NLYPSGPEPTPK 210
G Q P APSTKP + NL SG + +PK
Sbjct: 277 GASATEPAQEP-APSTKPEQPAGNL--SGQQGSPK 308
>M.Javanica_Scaff15113g071568 on XP_001349031 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2275
Score = 28.1 bits (61), Expect = 0.64, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 221 QPGY-PQPPASPSTKPPRNPYPSGPEPT-PKQPGYPQG-PASTPKQPGYPQAPASPTP 275
QPG+ P P + + P P+QP G PA+ P+ +AP PTP
Sbjct: 1722 QPGFCPPPEEKTEIEGTDDKCEEASSPVVPEQPAKEDGDPAAQPEDDTEKKAPVKPTP 1779
>M.Javanica_Scaff15113g071568 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 27.3 bits (59), Expect = 1.4, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 94 EMPESTTTQSESSEECECGD---SEEETTTEAPPTPR 127
+MPES E +CEC + +E +T T+ P P+
Sbjct: 2421 DMPESLDYHPEEFNKCECPEISKNESKTHTKKIPAPK 2457
>M.Javanica_Scaff15113g071568 on XP_819530 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 904
Score = 26.6 bits (57), Expect = 2.4, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 183 PGYPQPPAAPSTKPPRNLYPSGPEPTPKQLPPAAPSTP 220
P + A PST ++ P P TP PSTP
Sbjct: 734 PSLEKEAAKPSTVSSASIIPPAPPVTPNGQKAGNPSTP 771
>M.Javanica_Scaff15113g071568 on XP_821669 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 25.8 bits (55), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 145 QAPASPTPRNVYP-SGPEPSTPGGQVASHKPPAAPSTPQPGYPQPPAAPSTKPP-----R 198
Q S T RNV + P S G + +K P +P +P P P A+ S PP +
Sbjct: 677 QDDVSVTVRNVLLYNRPLSSAEIGSLKPNKVPISPLVKEPSSPSPVASDSIIPPITPVKK 736
Query: 199 NLYPSGPEPTP 209
N +G TP
Sbjct: 737 NAQIAGTSSTP 747
>M.Javanica_Scaff15113g071568 on XP_813237 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1496
Score = 25.8 bits (55), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 122 APPTPRNLYPSGPEPTPKQPGYPQAPASPTPRNVYPSGPEPSTPG-GQVASHKPPAAPST 180
A P P P+ P+P +P P+ PA P P P+ P+P+ P + S +P P+
Sbjct: 838 AEPKPAEPKPAEPKPAEPKPAEPK-PAEPKPAEPKPAEPKPAEPKPAEPKSAEP--KPAE 894
Query: 181 PQPGYPQP----PAAPSTKPPRNLYPSGPEPTPKQLPPA--APSTPQPGYPQP----PAS 230
P+P P+P PA P P++ P EP P + PA P+ P+P P+P PA
Sbjct: 895 PKPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAE 954
Query: 231 PSTKPPRNPYPSGPEPTPKQPGYPQGPASTPKQPGYPQAPASPTPRNVYPSGPR 284
P P P P+ P+P +P P+ P +P PA P P P+ P+
Sbjct: 955 PK---PAEPKPAEPKPAEPKPAEPKPAEPKPAEPK----PAEPKPAEPKPAEPK 1001
Score = 25.4 bits (54), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 29/173 (16%)
Query: 122 APPTPRNLYPSGPEPTPKQPGYPQAPASPTPRNVYPSGPEPSTPGGQVASHKPPAAPSTP 181
A P P P+ P+P +P P+ PA P P P+ P+P+ P P+ P
Sbjct: 713 AEPKPAEPKPAEPKPAEPKPAEPK-PAEPKPAEPKPAEPKPAEPK-----------PAEP 760
Query: 182 QPGYPQP----PAAPSTKPPRNLYPSGPEPTPKQLPPA--APSTPQPGYPQP----PASP 231
+P P+P PA P P++ P EP P + PA P+ P+P P+P PA P
Sbjct: 761 KPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEPKPAEP 820
Query: 232 STKPPRNPYPSGPEPTPKQPGYPQGPASTPKQPGYPQAPASPTPRNVYPSGPR 284
P P P+ P+P +P P+ P +P PA P P P+ P+
Sbjct: 821 K---PAEPKPAEPKPAEPKPAEPKPAEPKPAEPK----PAEPKPAEPKPAEPK 866
Score = 25.0 bits (53), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 122 APPTPRNLYPSGPEPTPKQPGYPQAPASPTPRNVYPSGPEPSTPGGQVASHKPPAAPSTP 181
A P P P+ P+P +P P+ PA P P P+ P+P+ P P+ P
Sbjct: 818 AEPKPAEPKPAEPKPAEPKPAEPK-PAEPKPAEPKPAEPKPAEPK-----------PAEP 865
Query: 182 QPGYPQP----PAAPSTKPPRNLYPSGPEPTPKQLPPAAPSTPQPGYPQPPASPSTKP-P 236
+P P+P PA P P++ P EP P + PA P+P P+P S +P P
Sbjct: 866 KPAEPKPAEPKPAEPKPAEPKSAEPKPAEPKPAEPKPA---EPKPAEPKPAEPKSAEPKP 922
Query: 237 RNPYPSGPEPTPKQPGYPQGPASTPKQPGYPQAPASPTPRNVYPSGPR 284
P P+ P+P +P P+ P +P PA P P P+ P+
Sbjct: 923 AEPKPAEPKPAEPKPAEPKPAEPKPAEPK----PAEPKPAEPKPAEPK 966
>M.Javanica_Scaff15113g071568 on XP_813587 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 751
Score = 25.0 bits (53), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 154 NVYPSGPEPSTPGGQVASHKPPAAPSTPQPGYPQPPAAPSTKPPRNLYPSGPEPTPKQLP 213
N P+ P P+T G Q S P G P PA P ++ P+ EP P + P
Sbjct: 553 NTQPTVPPPATAGPQQTDQATLNTSSVPSGGAPSTPAEPKSEEPKPAESESEEPKPAE-P 611
Query: 214 PAAPSTPQPGYPQPPASPST 233
AA S+ + G PAS ++
Sbjct: 612 NAATSSAREGTADQPASATS 631
>M.Javanica_Scaff15113g071568 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 25.0 bits (53), Expect = 6.9, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 10/50 (20%)
Query: 173 KPPAAPST---PQPGYPQPPAAPSTKPPRNLYPSGPEPTPKQLPPAAPST 219
KP AAPS + P+PP+ P T PP P P +P ST
Sbjct: 1705 KPAAAPSAETDKEKPVPKPPSQP-TNPP------NPFEHPAVIPALMSST 1747
>M.Javanica_Scaff15113g071568 on XP_001352242 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2264
Score = 25.0 bits (53), Expect = 7.6, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 41/116 (35%), Gaps = 36/116 (31%)
Query: 94 EMPE----STTTQSESSEECECGDSEEETTTEAPPTPRNLYPSGPE----PTPKQPGYPQ 145
+MPE T+ E+ E E SE+ T E T P E P+ G +
Sbjct: 1678 KMPEICKNVVDTKKENDETGETCTSEDTITKETVETDSTDGPKQEEERIAPSAGDDGATR 1737
Query: 146 APASPTPRNVYPSGPEPSTPGGQVASHKPPAAPSTPQPGYPQPPAAPSTKPPRNLY 201
P P+P+ SG + P TPQP KPP N++
Sbjct: 1738 GPQEPSPKA--DSGDD---------------NPETPQP-----------KPPSNVF 1765
Score = 25.0 bits (53), Expect = 7.6, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 204 GPEPTPKQLPPAA---PSTPQPGYPQPPASPSTKPPRNPYPSGPEPTPKQP 251
GP+ +++ P+A +T P P P A P P P P P
Sbjct: 1718 GPKQEEERIAPSAGDDGATRGPQEPSPKADSGDDNPETPQPKPPSNVFDNP 1768
>M.Javanica_Scaff15113g071568 on XP_001608795 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1323
Score = 24.6 bits (52), Expect = 9.1, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 97 ESTTTQSESSEECECGDS 114
+S T + + +EC+CGDS
Sbjct: 161 DSGTEEEKKQQECKCGDS 178
>M.Javanica_Scaff15113g071568 on XP_813586 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1748
Score = 24.6 bits (52), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 76/173 (43%), Gaps = 29/173 (16%)
Query: 122 APPTPRNLYPSGPEPTPKQPGYPQAPASPTPRNVYPSGPEPSTPGGQVASHKPPAAPSTP 181
A P P P+ P+P +P P+ PA P P P+ P+P+ P P+ P
Sbjct: 960 AEPKPAEPKPAEPKPAEPKPAEPK-PAEPKPAEPKPAEPKPAEPK-----------PAEP 1007
Query: 182 QPGYPQP----PAAPSTKPPRNLYPSGPEPTPKQ--LPPAAPSTPQPGYPQP----PASP 231
+P P+P PA P P++ P EP P + L P+ P+P P+P PA P
Sbjct: 1008 KPAEPKPAEPKPAEPKPAEPKSAEPKSAEPKPAEPKLAEPKPAEPKPAEPKPAEPKPAEP 1067
Query: 232 STKPPRNPYPSGPEPTPKQPGYPQGPASTPKQPGYPQAPASPTPRNVYPSGPR 284
P P P+ P+P +P P+ P +P PA P P P+ P+
Sbjct: 1068 K---PAEPKPAEPKPAEPKPAEPKPAEPKPAEPK----PAEPKPAEPKPAEPK 1113
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1437g015693
(320 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
P92132 CP2 (Cysteine protease) [Giardia duodenalis] 30 0.19
XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum] 28 1.2
XP_001611737 variant erythrocyte surface antigen-1, beta subuni... 26 4.0
XP_820499 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 6.6
>M.Javanica_Scaff1437g015693 on P92132 CP2 (Cysteine protease) [Giardia duodenalis]
Length = 255
Score = 29.6 bits (65), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 234 KGAAVRESFTNKSSINIPPPKLYIQQIFPS-LPPIIDTLGAGDCF 277
KGAA R +FT+K + P ++ +P +P ++D G G C+
Sbjct: 61 KGAAPRGTFTDKDDV---PESFDFREEYPHCIPEVVDQGGCGSCW 102
>M.Javanica_Scaff1437g015693 on XP_001349533 PfEMP3 (Establishment) [Plasmodium falciparum]
Length = 2441
Score = 27.7 bits (60), Expect = 1.2, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 134 EIKDGKLDWIHFEGRNFNQIKKMMEFTKNERLKNRPFISVELEKVRP 180
++K+ K+ +H +N+ + +K++E K E P + E+ +RP
Sbjct: 499 KLKERKMQELHKFKKNYKKYQKLLEREKRENPDGEPLNTPEIHVIRP 545
>M.Javanica_Scaff1437g015693 on XP_001611737 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1139
Score = 25.8 bits (55), Expect = 4.0, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 195 FVSKDFAQFKGWNDMEAAINGIQQEMGESS--KIVFCAWGEKGAAVRESFTNKSSINIPP 252
F S DF W+ M+ +N + MG SS K++ G +V + + + I++
Sbjct: 829 FQSWDFKPNGLWHLMKGELNQVSLNMGSSSGDKVIKALDKFSGVSVDSADIHSTVIDVSL 888
Query: 253 PKLYIQQIFPSLPPI 267
LY P L P+
Sbjct: 889 RTLYSTNNGPYLCPL 903
>M.Javanica_Scaff1437g015693 on XP_820499 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 654
Score = 25.0 bits (53), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 4/25 (16%)
Query: 232 GEKGAAVRESFTNKSSINIPPPKLY 256
G+ GA+ +E KS IPPPK Y
Sbjct: 59 GKGGASSKE----KSPAQIPPPKTY 79
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1583g016827
(499 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001610908 RAP-1 (Adhesin) [Babesia bovis] 27 2.4
XP_815493 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 8.7
>M.Javanica_Scaff1583g016827 on XP_001610908 RAP-1 (Adhesin) [Babesia bovis]
Length = 565
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 27/164 (16%)
Query: 159 PIYTDNIGNLDAFCPRAEQLFTKIRTSPAYLNVKKENAKFFEYISEKTKMNFTLESIGLL 218
P+ N LDA A +LF + ++PA +VK+E +F + F GLL
Sbjct: 121 PLSLPNPYQLDA----AFRLFKESASNPAKNSVKREWLRFRNGANHGDYHYFV---TGLL 173
Query: 219 DDIIYIENLYNMTQPEWLTKEIQQRIYNLTFIYTITKIRTSPAYLNVKKENAKFFEYISE 278
++ + E T E+L ++ +Y T Y YL V NAKFF S
Sbjct: 174 NNNVVHEE--GTTDVEYLVNKV---LYMATMNY--------KTYLTVNSMNAKFFNRFSF 220
Query: 279 KTKMNFTLESIGLLDDIIYIENLYNMTQPEWLTKEIQQRIYNLT 322
TK+ F+ L DII +N+ PE + +RI LT
Sbjct: 221 TTKI-FSRRIRQTLSDII----RWNV--PEDFEERSIERITQLT 257
>M.Javanica_Scaff1583g016827 on XP_815493 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 706
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 19/87 (21%)
Query: 99 STDVNRTLSSAQANLAGMFPMGVPGIDIPDLPKKWPSRWTPIPIHTVPIY---------- 148
S D+ +T + A L+G++ + PG+ + ++ + I V +Y
Sbjct: 304 SRDMGKTWTEAIGTLSGVWVISQPGVRLYEIFRVGALTTATIEGRKVMLYIQRGYTSGNK 363
Query: 149 ---------TDNKKXIHTVPIYTDNIG 166
TDN + H P+ DN G
Sbjct: 364 RATALCLWVTDNNRTFHVGPVAMDNAG 390
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13973g068722
(164 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_807449 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.4
XP_806132 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 3.4
XP_001609166 variant erythrocyte surface antigen-1, beta subuni... 23 7.8
XP_001610496 variant erythrocyte surface antigen-1, beta subuni... 23 8.1
>M.Javanica_Scaff13973g068722 on XP_807449 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 700
Score = 24.6 bits (52), Expect = 3.4, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 122 RGFYAKSLTEINELLELKRTEL-KDRGKYFENETDIKVFLW 161
R FY ++L I + +R L RG++ NET+ ++LW
Sbjct: 322 RSFYVEAL--ITATIGGRRVMLYTQRGEFSGNETERALYLW 360
>M.Javanica_Scaff13973g068722 on XP_806132 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 754
Score = 24.6 bits (52), Expect = 3.4, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 122 RGFYAKSLTEINELLELKRTEL-KDRGKYFENETDIKVFLW 161
R FY ++L I + +R L RG++ NET+ ++LW
Sbjct: 376 RSFYVEAL--ITATIGGRRVMLYTQRGEFSGNETERALYLW 414
>M.Javanica_Scaff13973g068722 on XP_001609166 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1161
Score = 23.5 bits (49), Expect = 7.8, Method: Composition-based stats.
Identities = 9/11 (81%), Positives = 9/11 (81%)
Query: 84 KELYKCKNGGN 94
K LYKC NGGN
Sbjct: 852 KCLYKCTNGGN 862
>M.Javanica_Scaff13973g068722 on XP_001610496 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1159
Score = 23.5 bits (49), Expect = 8.1, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Query: 84 KELYKCKNGGNCNVMNG-IKC 103
K L K KNGG+C+ N +KC
Sbjct: 896 KALEKWKNGGDCSTTNDTLKC 916
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15339g072103
(96 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.025
XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum] 29 0.026
XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum] 28 0.094
XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.14
XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.15
XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.18
XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.18
XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.20
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.21
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.25
XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum] 26 0.54
XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum] 24 1.6
AAM45250 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 24 2.1
AAM45253 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 24 2.1
AAM45255 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 24 2.1
AAM45258 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 24 2.1
AAL23761 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum] 24 2.1
XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.2
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 24 2.5
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 23 4.9
XP_815117 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 7.3
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.0
XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 8.1
XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.0
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 22 9.8
>M.Javanica_Scaff15339g072103 on XP_001347288 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2241
Score = 29.3 bits (64), Expect = 0.025, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 10/56 (17%)
Query: 2 INSTTNEI-----VSND--GNLELLNLKNEENNVDIYLEMLKNKFSDPTFLIGLEH 50
+N +TN + VSN+ ++L+N NNVDIY E+LK K ++ L G H
Sbjct: 2024 VNMSTNSMDDPKYVSNNVYSGIDLINDSLNSNNVDIYDEVLKRKENE---LFGTNH 2076
Score = 23.9 bits (50), Expect = 2.3, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 3 NSTTNEIVSNDGNLELLNLKNEENNVDIYLEMLKNKFSDP 42
N T N VS +++ N+ NN+D LE L F++P
Sbjct: 2145 NKTLNTDVSIQIHMDNPKPINQFNNMDTILEDLDKPFNEP 2184
>M.Javanica_Scaff15339g072103 on XP_001351563 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2149
Score = 29.3 bits (64), Expect = 0.026, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 10/56 (17%)
Query: 2 INSTTNEI-----VSND--GNLELLNLKNEENNVDIYLEMLKNKFSDPTFLIGLEH 50
+N +TN + VSN+ ++L+N NNVDIY E+LK K ++ L G H
Sbjct: 1913 VNMSTNSMDDRQYVSNNVYSGIDLINDSLNSNNVDIYDELLKRKENE---LFGTNH 1965
Score = 23.1 bits (48), Expect = 4.6, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 3 NSTTNEIVSNDGNLELLNLKNEENNVDIYLEMLKNK 38
N TTN + D EL KN+ NV +LE+L +
Sbjct: 421 NGTTNNLYVKDFYDEL---KNKHENVRSFLELLSKE 453
>M.Javanica_Scaff15339g072103 on XP_001349515 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 1711
Score = 27.7 bits (60), Expect = 0.094, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Query: 1 MINSTTNEIVSNDGN-----LELLNLKNEENNVDIYLEMLKNKFSDPTFLIGLEHFLGNY 55
M+N T N+I + N ++L+N NNVDIY E+LK K ++ L G H N
Sbjct: 1470 MVN-TNNDIPISGKNGTYSGIDLINDSLNSNNVDIYDEVLKRKENE---LFGTNHTKKNT 1525
Query: 56 S 56
S
Sbjct: 1526 S 1526
>M.Javanica_Scaff15339g072103 on XP_001351318 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2169
Score = 27.3 bits (59), Expect = 0.14, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 2 INSTTN---EIVSNDGN-----LELLNLKNEENNVDIYLEMLKNKFSDPTFLIGLEH 50
IN +TN +I N N ++L+N NNVDIY E+LK K ++ L G H
Sbjct: 1956 INMSTNSMDDIPINSHNNIYSGIDLINDSLNSNNVDIYDEVLKRKENE---LFGTNH 2009
>M.Javanica_Scaff15339g072103 on XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2256
Score = 27.3 bits (59), Expect = 0.15, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Query: 1 MINSTTNEIVSNDGN----LELLNLKNEENNVDIYLEMLKNKFSDPTFLIGLEH 50
M+N+ N ++ D N ++L+N N VDIY E+LK K ++ L G EH
Sbjct: 2016 MVNND-NIPINRDNNPYSGIDLINDSLNSNKVDIYDELLKRKENE---LFGTEH 2065
>M.Javanica_Scaff15339g072103 on XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2312
Score = 26.9 bits (58), Expect = 0.18, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 4 STTNEIVSNDGN-----LELLNLKNEENNVDIYLEMLKNKFSDPTFLIGLEHFLGNYS 56
++ N ND N ++L+N N++DIY EMLK K ++ L G +H N +
Sbjct: 2050 TSNNHSPYNDKNDLYSGIDLINDALSGNHIDIYDEMLKRKENE---LFGTQHHPKNIT 2104
>M.Javanica_Scaff15339g072103 on XP_001351439 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2326
Score = 26.9 bits (58), Expect = 0.18, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 4 STTNEIVSNDGN-----LELLNLKNEENNVDIYLEMLKNKFSDPTFLIGLEHFLGNYS 56
++ N ND N ++L+N N++DIY EMLK K ++ L G +H N +
Sbjct: 2064 TSNNHSPYNDKNDLYSGIDLINDALSGNHIDIYDEMLKRKENE---LFGTQHHPKNIT 2118
>M.Javanica_Scaff15339g072103 on XP_001351437 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2277
Score = 26.9 bits (58), Expect = 0.20, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 4 STTNEIVSNDGN-----LELLNLKNEENNVDIYLEMLKNKFSDPTFLIGLEHFLGNYS 56
++ N ND N ++L+N N++DIY EMLK K ++ L G +H N +
Sbjct: 2046 TSNNHSPYNDKNDLYSGIDLINDALSGNHIDIYDEMLKRKENE---LFGTQHHPKNIT 2100
>M.Javanica_Scaff15339g072103 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 26.9 bits (58), Expect = 0.21, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 4 STTNEIVSNDGNLELLNLKNEENNVDIYLEMLKNKFSDPTFLIGLEH 50
S N++ S ++L+N NNVDIY E+LK K ++ L G H
Sbjct: 1965 SDKNDVYSG---IDLINDSLNSNNVDIYDEVLKRKENE---LFGTNH 2005
>M.Javanica_Scaff15339g072103 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 26.6 bits (57), Expect = 0.25, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Query: 1 MINSTTNEIVSNDGN----LELLNLKNEEN-NVDIYLEMLKNKFSDPTFLIGLEH 50
M+NS + ++ D N ++L+N N NVDIY E+LK K ++ L G+ H
Sbjct: 1926 MVNSMDDIPINRDNNVYSGIDLINDTLSGNHNVDIYDEVLKRKENE---LFGINH 1977
>M.Javanica_Scaff15339g072103 on XP_001349035 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2239
Score = 25.8 bits (55), Expect = 0.54, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Query: 4 STTNEIVSNDGN-----LELLNLKNEENNVDIYLEMLKNKFSDPTFLIGLEH 50
++ N ND N ++L+N N++DIY EMLK K ++ L G H
Sbjct: 1979 TSNNHSPYNDKNDLYSGIDLINDALSGNHIDIYDEMLKRKENE---LFGTNH 2027
>M.Javanica_Scaff15339g072103 on XP_001350415 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3056
Score = 24.3 bits (51), Expect = 1.6, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 8/59 (13%)
Query: 18 LLNLKNEENNVDIYLEMLKNKFSDPTFLIGLEHFLGNYSIPGGSQLVRESISRHLRRLF 76
L N NE+ + + LE +KN F D ++I L N + I R L RL
Sbjct: 2073 LGNYYNEDKDKEKALEAMKNSFYDYEYIIKGSDMLTNIQF--------KDIKRKLDRLL 2123
>M.Javanica_Scaff15339g072103 on AAM45250 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 23.9 bits (50), Expect = 2.1, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 9 IVSNDGNLELLNLKNEENNVDIYLEMLKNKFSD 41
++S + +LL KNE + I+ L+N FSD
Sbjct: 64 LISVNTEAKLLYNKNEGKDPSIFCNELRNSFSD 96
>M.Javanica_Scaff15339g072103 on AAM45253 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 23.9 bits (50), Expect = 2.1, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 9 IVSNDGNLELLNLKNEENNVDIYLEMLKNKFSD 41
++S + +LL KNE + I+ L+N FSD
Sbjct: 64 LISVNTEAKLLYNKNEGKDPSIFCNELRNSFSD 96
>M.Javanica_Scaff15339g072103 on AAM45255 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 23.9 bits (50), Expect = 2.1, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 9 IVSNDGNLELLNLKNEENNVDIYLEMLKNKFSD 41
++S + +LL KNE + I+ L+N FSD
Sbjct: 64 LISVNTEAKLLYNKNEGKDPSIFCNELRNSFSD 96
>M.Javanica_Scaff15339g072103 on AAM45258 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 23.9 bits (50), Expect = 2.1, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 9 IVSNDGNLELLNLKNEENNVDIYLEMLKNKFSD 41
++S + +LL KNE + I+ L+N FSD
Sbjct: 64 LISVNTEAKLLYNKNEGKDPSIFCNELRNSFSD 96
>M.Javanica_Scaff15339g072103 on AAL23761 BAEBL/EBP2 (Adhesin) [Plasmodium falciparum]
Length = 616
Score = 23.9 bits (50), Expect = 2.1, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 9 IVSNDGNLELLNLKNEENNVDIYLEMLKNKFSD 41
++S + +LL KNE + I+ L+N FSD
Sbjct: 64 LISVNTEAKLLYNKNEGKDPSIFCNELRNSFSD 96
>M.Javanica_Scaff15339g072103 on XP_001351513 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2152
Score = 23.9 bits (50), Expect = 2.2, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 8/45 (17%)
Query: 2 INSTTN-----EIVSND--GNLELLNLK-NEENNVDIYLEMLKNK 38
IN TN + VSN+ ++L+N N + +VDIY E+LK K
Sbjct: 1919 INEITNTTDDSKYVSNNIYSGIDLINDSLNSDQHVDIYDELLKRK 1963
>M.Javanica_Scaff15339g072103 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 23.9 bits (50), Expect = 2.5, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 9/46 (19%)
Query: 2 INSTTNEI-----VSND--GNLELLN--LKNEENNVDIYLEMLKNK 38
IN +TN + VSN+ ++L+N L + ++DIY E+LK K
Sbjct: 2030 INMSTNSMDDPKYVSNNVYSGIDLINDSLNSGNEHIDIYDELLKRK 2075
>M.Javanica_Scaff15339g072103 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 22.7 bits (47), Expect = 4.9, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Query: 26 NNVDIYLEMLKNKFSDPTFLIGLEH 50
+NVDIY E+LK K ++ L G +H
Sbjct: 1933 HNVDIYDELLKRKENE---LFGTKH 1954
>M.Javanica_Scaff15339g072103 on XP_815117 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 22.3 bits (46), Expect = 7.3, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 2 INSTTNEIVSNDGNLEL-LNLKNEENNVDIYLEMLKNKFSDPTF 44
I S + I+ DG L + KNE+N V++Y ++ +K + T+
Sbjct: 279 IASGGSGILMEDGTLVFSMMAKNEKNEVNVYSMIIYSKDNGSTW 322
>M.Javanica_Scaff15339g072103 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 22.3 bits (46), Expect = 8.0, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 3 NSTTNEIVSNDGNLELLNLKNEENNVDIYLEMLK 36
NST N D +L KNE N+D +L +LK
Sbjct: 411 NSTINNYYYYDFYEKLQ--KNEYGNIDAFLNLLK 442
>M.Javanica_Scaff15339g072103 on XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1058
Score = 22.3 bits (46), Expect = 8.1, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 12 NDGNLELLNLKNEENNVDIYLEMLKNKFSDPTF 44
+D L +KNE +N + + + +NK SD ++
Sbjct: 418 DDAAASSLLMKNERDNKEELISLYENKKSDGSY 450
>M.Javanica_Scaff15339g072103 on XP_001351877 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2270
Score = 21.9 bits (45), Expect = 9.0, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Query: 10 VSND--GNLELLN--LKNEENNVDIYLEMLKNKFSDPTFLIGLEH 50
VSN+ ++L+N L + ++DIY E+LK K ++ L G H
Sbjct: 2029 VSNNVYSGIDLINDSLNSGNQHIDIYDELLKRKENE---LFGTNH 2070
>M.Javanica_Scaff15339g072103 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 21.9 bits (45), Expect = 9.8, Method: Composition-based stats.
Identities = 9/13 (69%), Positives = 11/13 (84%)
Query: 26 NNVDIYLEMLKNK 38
+NVDIY E+LK K
Sbjct: 2000 HNVDIYDELLKRK 2012
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1606g017008
(93 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001609315 variant erythrocyte surface antigen-1, alpha subun... 26 0.33
XP_807279 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.2
XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.2
XP_807476 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 3.9
XP_846885 VSG (Establishment) [Trypanosoma brucei] 23 4.4
XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.7
XP_812792 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.1
XP_804625 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.7
XP_829333 VSG (Establishment) [Trypanosoma brucei] 22 7.0
XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum] 22 8.5
XP_803417 VSG (Establishment) [Trypanosoma brucei] 22 8.8
>M.Javanica_Scaff1606g017008 on XP_001609315 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1338
Score = 26.2 bits (56), Expect = 0.33, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 57 VAVVDDGIV--VEAKAKEGDDVKELKEEVE 84
V + D +V VEA +GDD KELK+ +E
Sbjct: 666 VGEISDALVKKVEASGGDGDDGKELKDLLE 695
>M.Javanica_Scaff1606g017008 on XP_807279 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 872
Score = 24.6 bits (52), Expect = 1.2, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 23 LDEVEKEDFAVEEKR-KKEEKTSHWEELGEVLEHVVAVVDDG 63
L EV+ FA+ E R K E+K S + G +H+V VD G
Sbjct: 150 LVEVQGHVFAIAEARCKDEDKCSDFSFTGIASKHLVLNVDAG 191
>M.Javanica_Scaff1606g017008 on XP_818480 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 926
Score = 23.9 bits (50), Expect = 2.2, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Query: 24 DEVEKEDF-AVEEKRKKEEKTSH 45
D EKE+ A+ EK+K EKTSH
Sbjct: 427 DNNEKEELIALYEKKKGGEKTSH 449
>M.Javanica_Scaff1606g017008 on XP_807476 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 856
Score = 23.1 bits (48), Expect = 3.9, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 24 DEVEKEDFAV-EEKRKKEEKTSHWEELGEVLEHVVAVVDDGIVVEAKAKEGDDVKELKEE 82
++ +D +V E R +E SH E + + + D +++ A + E D + E+
Sbjct: 719 EQAASKDVSVASEPRSEESAASHEELTEDDTDEQEEEIVDDLLLAASSSEADGTEFSSED 778
Query: 83 VED 85
VE+
Sbjct: 779 VEE 781
>M.Javanica_Scaff1606g017008 on XP_846885 VSG (Establishment) [Trypanosoma brucei]
Length = 525
Score = 22.7 bits (47), Expect = 4.4, Method: Composition-based stats.
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 63 GIVVEAKAKEGDDVKE 78
G EA+AK+GDD K+
Sbjct: 399 GTTQEAQAKKGDDCKQ 414
>M.Javanica_Scaff1606g017008 on XP_805548 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1044
Score = 22.7 bits (47), Expect = 4.7, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 57 VAVVDDGIVVEAKAKEGDDVKELKEEVEDEEEEKM 91
VA D + E+K++E +EL E+ D+ EE++
Sbjct: 725 VASTDLPVASESKSEESAIYEELTEDDTDKREEEI 759
>M.Javanica_Scaff1606g017008 on XP_812792 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 879
Score = 22.7 bits (47), Expect = 5.1, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 13 EVAANDLFH---VLDEVEKEDFAVEEKRKKEEKTS 44
EVAA+ L + D ++E A+ EK+K EKTS
Sbjct: 423 EVAASSLLYKSGTGDNKKEELIALYEKKKGSEKTS 457
Score = 21.9 bits (45), Expect = 8.4, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 68 AKAKEGDDVKELKEEVEDEEEEKME 92
A +GD E +EE DE+E++++
Sbjct: 805 ASLSDGDPTVETREEGTDEQEKEIQ 829
>M.Javanica_Scaff1606g017008 on XP_804625 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1042
Score = 22.7 bits (47), Expect = 5.7, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 57 VAVVDDGIVVEAKAKEGDDVKELKEEVEDEEEE 89
VA DD + E++++E EL + DE+ E
Sbjct: 723 VASTDDSVAPESRSEESATSHELTGDDTDEQVE 755
>M.Javanica_Scaff1606g017008 on XP_829333 VSG (Establishment) [Trypanosoma brucei]
Length = 420
Score = 22.3 bits (46), Expect = 7.0, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 27 EKEDFAVEEKRKKEEKTSHWEELG 50
E ED + ++ +EE S WE +G
Sbjct: 75 ELEDLQKQAEKYREENMSFWETVG 98
>M.Javanica_Scaff1606g017008 on XP_001350595 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2256
Score = 21.9 bits (45), Expect = 8.5, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 5 LLLLRFIVEVAANDLFHVLDEVEKEDFAVEEKRKKEEKTSHWEELGE 51
LL R I+E D+ K D A K+ E+KT+ WE++ E
Sbjct: 1552 LLKKRKIIEKCTQKGEKTCDDESKNDCACV-KKWVEKKTTEWEQIKE 1597
>M.Javanica_Scaff1606g017008 on XP_803417 VSG (Establishment) [Trypanosoma brucei]
Length = 540
Score = 21.9 bits (45), Expect = 8.8, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 23 LDEVEKEDFAVEEKRKKEEKTSHWEELGEVLEHVVAVVDDGIVVEAKAKEGDDVKELKEE 82
L EVE + + K++E + ++ E E + +G V +AK+ + KE+K E
Sbjct: 405 LQEVETKTATKSAEDKEKECNTKGKDKKEECEKLA---KEGCVFNTEAKKCELKKEVKPE 461
Query: 83 VEDEEEE 89
+E +E
Sbjct: 462 LEKANQE 468
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1301g014588
(326 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_812593 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.85
XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.2
XP_815318 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 1.2
XP_001609540 variant erythrocyte surface antigen-1, alpha subun... 27 2.7
XP_808176 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 5.3
AAM20900 cGMP-dependent protein kinase (Others) [Eimeria tene... 25 6.5
>M.Javanica_Scaff1301g014588 on XP_812593 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 868
Score = 28.1 bits (61), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 15/64 (23%)
Query: 5 YNAIVILFFILKNYSEGAPKKRKEETSGQQPRENANYYEGGSPSAPAFTLTATTDVCEWG 64
Y+A+++LF ++ + GA G+ PR + ++G TA+ + W
Sbjct: 46 YSAVLLLFVVMMCFGSGAAS-----AGGRNPRNTIDPFKG----------TASIPLANWR 90
Query: 65 GCEE 68
G +E
Sbjct: 91 GFKE 94
>M.Javanica_Scaff1301g014588 on XP_808156 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1058
Score = 27.7 bits (60), Expect = 1.2, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 22 APKKRKEETS-------GQQPRENANYYEGGSPSAPAFTLTATTDVCEWGGCEE--GFAN 72
A + R EE++ G ++ + P+AP+FT+ A + V E E G ++
Sbjct: 747 ASESRSEESTTYEKLAEGDTDKQEEESADDPVPAAPSFTVVAGSSVSEPAIAVESAGNSH 806
Query: 73 KDTFVKHVNG----HAEMSQDNKCHWRDCE---REEPFQRQSHL 109
++ + G A +++DNK RD E RE P + + +
Sbjct: 807 QENNFQLSEGKTAQQATLNEDNKSMQRDSEVQPRELPSTKSTEI 850
>M.Javanica_Scaff1301g014588 on XP_815318 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 587
Score = 27.3 bits (59), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 47 PSAPAFTLTATTDVCEWGGCEEGFAN--KDTFVKHVNG----HAEMSQDNKCHWRDCE-- 98
P+AP+FT+ A + V E E N ++ + G A +++DNK RD E
Sbjct: 308 PAAPSFTVVAGSSVSEPAIAVESAGNSHQENNFQLSEGKTAQQATLNEDNKSMQRDSEVQ 367
Query: 99 -REEPFQRQSHL 109
RE P + + +
Sbjct: 368 PRELPSTKSTEI 379
>M.Javanica_Scaff1301g014588 on XP_001609540 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1349
Score = 26.6 bits (57), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 8/40 (20%)
Query: 126 HVYQNGVRCDKRYTQLNNLEKHKQTHAAERIIYKCDFPSC 165
HV+ GV D+ YT L N A ++I C+ P C
Sbjct: 837 HVFAVGVSVDEEYTALLN--------AINQLISICNSPKC 868
>M.Javanica_Scaff1301g014588 on XP_808176 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 889
Score = 25.4 bits (54), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 64 GGCEEGFANKDTFVKHVNGHAEMSQDNKCHWRDCE 98
G C+ G N + + V G +N+ HWR+ +
Sbjct: 187 GSCKAGTENIKSGILLVKGKVGEGDNNQIHWRETD 221
>M.Javanica_Scaff1301g014588 on AAM20900 cGMP-dependent protein kinase (Others) [Eimeria
tenella]
Length = 255
Score = 25.0 bits (53), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 270 PPQGVQEHFVHPTYQHGGELQLFPTNVEHQEDHQNEDY-LMQDNYPHEDVNTDLSLWH 326
P Q Q ++HGGE ++ ++ QED Q ED L+ E +DLSL
Sbjct: 109 PSQQQQNEEAAAPHKHGGERKVQKA-IKQQEDTQAEDARLLGHLEKREKTPSDLSLIR 165
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14051g068927
(105 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14587g070256
(79 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805577 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 0.26
XP_808883 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 1.2
XP_809659 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.4
XP_001609101 variant erythrocyte surface antigen-1, alpha subun... 23 3.6
XP_001609163 variant erythrocyte surface antigen-1, alpha subun... 22 4.1
XP_829781 VSG (Establishment) [Trypanosoma brucei] 22 4.2
>M.Javanica_Scaff14587g070256 on XP_805577 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 785
Score = 25.8 bits (55), Expect = 0.26, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Query: 31 AQSLMYGHYGNTSYGQQQQQMQQMMMAVARR-------SYGFAPTWPR 71
++SL+ G + YG ++ +M+A+A+ +YG A TW R
Sbjct: 54 SKSLISGEAVKSFYGHSLVDVEGLMVAIAKANYKSADWNYGDADTWSR 101
>M.Javanica_Scaff14587g070256 on XP_808883 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 446
Score = 23.9 bits (50), Expect = 1.2, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 5 LGPFM--GFPTSAFYAGIPSTGNQLAHHAQSLMYGHYGNTSYGQQQQQMQQM 54
+GP F S F + + G A HA+ YG G+ + + +QM+Q+
Sbjct: 383 VGPIFPGSFDPSPFITLLYTKGELFALHAKYGEYGASGSLFFTRLTEQMRQI 434
>M.Javanica_Scaff14587g070256 on XP_809659 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 796
Score = 23.1 bits (48), Expect = 2.4, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 14 SAFYAGIPSTGNQLAHHAQSLMYGHY 39
S F + S G +A A+ +YGHY
Sbjct: 109 SFFAPSLVSAGGVIAAFAEGYVYGHY 134
>M.Javanica_Scaff14587g070256 on XP_001609101 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1359
Score = 22.7 bits (47), Expect = 3.6, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 17 YAGIPSTGNQLAHHAQSLMYG 37
Y+G P T +Q HH ++ G
Sbjct: 277 YSGYPVTPSQRRHHCARILLG 297
>M.Javanica_Scaff14587g070256 on XP_001609163 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1360
Score = 22.3 bits (46), Expect = 4.1, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 17 YAGIPSTGNQLAHHAQSLMYG 37
Y+G P T +Q HH ++ G
Sbjct: 277 YSGYPVTPSQRRHHCARILLG 297
>M.Javanica_Scaff14587g070256 on XP_829781 VSG (Establishment) [Trypanosoma brucei]
Length = 514
Score = 22.3 bits (46), Expect = 4.2, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 12 PTSAFYAGIPSTGNQLAHHAQSLMYGHY 39
P S+F S GN +A H L G++
Sbjct: 218 PQSSFKLTYGSRGNDVAGHVPKLAAGYF 245
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1501g016189
(509 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001608668 variant erythrocyte surface antigen-1, alpha subun... 30 0.43
XP_001608665 variant erythrocyte surface antigen-1, alpha subun... 30 0.50
XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.85
XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.0
XP_817493 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.1
XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum] 27 4.2
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 27 4.2
XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 4.3
XP_815173 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 5.8
XP_809996 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 9.4
AAC48311 TRAP C-1 (Adhesin) [Cryptosporidium parvum] 25 9.6
>M.Javanica_Scaff1501g016189 on XP_001608668 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1337
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 116 DEWDSGTECPNVCEALGSEARSEAKQRRATHEAGWRKREELAFEG-KKMMEEKSKELEKQ 174
DE G E +V +A+GS Q EA K E EG K+ + E KELEK
Sbjct: 679 DEEADGEELFDVLKAIGSVVV----QLGNAQEALEGKAESKVIEGVKQKLGEAKKELEKA 734
Query: 175 KVELSS-LEQRKLELEEAKNVAEKLESDAKREVD--EQFEEEKNRKLTEKAQNLLKEIDN 231
K + S + ELEEAK EK AK E D + EK K E A++ L ++
Sbjct: 735 KEAVESEVGMDGKELEEAKKAVEK----AKTEGDNVRMAKLEKKMKALENAKDALNKLMT 790
Query: 232 DGNGKISNEELRLYSGLGQRQKL 254
G + L G G Q++
Sbjct: 791 SGGSNGALNTLANGGGNGSLQQI 813
>M.Javanica_Scaff1501g016189 on XP_001608665 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1326
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 146 HEAGWRKREELAFEGKKMMEEKSKELEKQKVELSSLEQRKLELEEAKNVAEKLESDAKRE 205
H+ WR + GK + + KS+E EK K L + + ++L A+ E +++A +
Sbjct: 671 HDRKWRVGKVKEGLGKVVSKGKSEE-EKAKALLEKIGEVVVQLGNAQEALEGKKTEAIEK 729
Query: 206 VDEQFEEEKNR------------KLTEKAQNLLKEIDNDGNGKISNEELRLYSGLGQRQK 253
V E+ E K + KL E A L+ + N+G G + + SG G +
Sbjct: 730 VKEELTEAKTKLEDAVKKDGLTGKLAE-ATKKLEALTNNGGGDKGALHILVDSGPGSLHQ 788
Query: 254 LLPPENELKEESENG 268
+ E ++ +G
Sbjct: 789 VATASKEYDKDYSSG 803
>M.Javanica_Scaff1501g016189 on XP_811309 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1033
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 156 LAFEGKKMMEEKSKELEKQKVELSSLEQRKLELEEAKNVAEKLESDAKREVDEQFEEEKN 215
+ + K ++K EL KV + SL K E+A N + S++K E EE N
Sbjct: 678 MLYNEKLFGDDKLDELHASKVNIPSLGAEKQPTEQAANTGALVASESKSEEITASHEELN 737
Query: 216 RKLTEK 221
TEK
Sbjct: 738 ENDTEK 743
>M.Javanica_Scaff1501g016189 on XP_811703 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1043
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 27/60 (45%)
Query: 162 KMMEEKSKELEKQKVELSSLEQRKLELEEAKNVAEKLESDAKREVDEQFEEEKNRKLTEK 221
K+ + EL KV + SL K E+A N + S++K E EE N TEK
Sbjct: 694 KLFGSELDELHASKVNIPSLGAEKQPTEQAANTGALVASESKSEGSATSHEELNEDDTEK 753
>M.Javanica_Scaff1501g016189 on XP_817493 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 765
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/57 (21%), Positives = 23/57 (40%)
Query: 94 YKPSLIPSSRVNDYICDCCDGSDEWDSGTECPNVCEALGSEARSEAKQRRATHEAGW 150
+ S IP++ + ++ + G D W G C N ++ ++ K A W
Sbjct: 483 FSESSIPTAGLVGFLSNTSSGGDTWIDGYRCMNASVTKATKVKNGFKFTGPGSRATW 539
>M.Javanica_Scaff1501g016189 on XP_001349738 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2162
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 225 LLKEIDNDGNGKISNEELRLYSGLGQ--RQKLLPPENELKEESENGGGDNLELEEMFKGI 282
+ K +ND ++ E R ++ +G R K L ++K++ + +LEE K I
Sbjct: 160 IHKHTNNDSAAELCTELARSFADIGDIIRGKDLY-LGDIKKKQNGKKTEREKLEENLKRI 218
Query: 283 FGEGNENID---LEMIKNKFKNIKD 304
FG+ +E++ E++K ++K+I D
Sbjct: 219 FGKIHEDVTNGKKEVLKTRYKDIND 243
>M.Javanica_Scaff1501g016189 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 225 LLKEIDNDGNGKISNEELRLYSGLGQ--RQKLLPPENELKEESENGGGDNLELEEMFKGI 282
+ K +ND ++ E R ++ +G R K L ++K++ + +LEE K I
Sbjct: 160 IHKHTNNDSAAELCTELARSFADIGDIIRGKDLYL-GDIKKKQNGKKTEREKLEENLKRI 218
Query: 283 FGEGNENID---LEMIKNKFKNIKD 304
FG+ +E++ E++K ++K+I D
Sbjct: 219 FGKIHEDVTNGKKEVLKTRYKDIND 243
>M.Javanica_Scaff1501g016189 on XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/57 (21%), Positives = 23/57 (40%)
Query: 94 YKPSLIPSSRVNDYICDCCDGSDEWDSGTECPNVCEALGSEARSEAKQRRATHEAGW 150
+ S IP++ + ++ + G D W G C N ++ ++ K A W
Sbjct: 549 FSESSIPTAGLVGFLSNTSSGGDTWIDGYRCMNASVTKATKVKNGFKFTGPGSRATW 605
>M.Javanica_Scaff1501g016189 on XP_815173 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 661
Score = 26.2 bits (56), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/57 (21%), Positives = 23/57 (40%)
Query: 94 YKPSLIPSSRVNDYICDCCDGSDEWDSGTECPNVCEALGSEARSEAKQRRATHEAGW 150
+ S IP++ + ++ + G D W G C N ++ ++ K A W
Sbjct: 484 FSESSIPTAGLVGFLSNTSSGGDTWIDGYRCMNASVTKATKVKNGFKFTGPGSRATW 540
>M.Javanica_Scaff1501g016189 on XP_809996 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 787
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 191 AKNVAEKLESDAKREVDEQFEEEKNRKLTEKAQNLLKEID 230
A V KL+S A EV E +KN TE Q + E+
Sbjct: 725 APAVPMKLDSHAVEEVSEGGAAKKNTSRTEDVQFFVPEVS 764
>M.Javanica_Scaff1501g016189 on AAC48311 TRAP C-1 (Adhesin) [Cryptosporidium parvum]
Length = 255
Score = 25.0 bits (53), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 13/32 (40%)
Query: 116 DEWDSGTECPNVCEALGSEARSEAKQRRATHE 147
W S T C VC + S RS R HE
Sbjct: 157 STWSSWTTCSGVCGEMRSRTRSVLSFPRYDHE 188
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1415g015513
(157 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.64
>M.Javanica_Scaff1415g015513 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 26.9 bits (58), Expect = 0.64, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
Query: 44 DVEGTEFAIFKLLAEQYEQLPVTLCQMNIEVHNQPVYGSFFTRHRFLRNFDWFMRHGRFA 103
D+ + +++ YE + CQM H P +G + F FD ++++
Sbjct: 535 DINNGKVKNYQIWQCYYENSEINKCQMTPSSHKVPKHGYIMS---FFAFFDLWVKN---- 587
Query: 104 LIKTDTLNVKNK 115
+ DT+N KN+
Sbjct: 588 -LLIDTINWKNE 598
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15423g072286
(55 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001219219 VSG (Establishment) [Trypanosoma brucei] 22 2.3
XP_846273 VSG (Establishment) [Trypanosoma brucei] 22 4.1
>M.Javanica_Scaff15423g072286 on XP_001219219 VSG (Establishment) [Trypanosoma brucei]
Length = 463
Score = 22.3 bits (46), Expect = 2.3, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 23 KALRKL--KESVDRFEFNFHKAVLEEYGQIG 51
KAL +L KES+D + A + YGQ G
Sbjct: 300 KALLRLYDKESIDTGDQQAQAATKDAYGQTG 330
>M.Javanica_Scaff15423g072286 on XP_846273 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 21.6 bits (44), Expect = 4.1, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 15 LGQHQGVEKALRKLKESVDRFEFNF 39
+G+ GV + KLK+ + + NF
Sbjct: 113 VGEASGVYNVIHKLKDGMGKLMINF 137
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15495g072475
(158 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_802978 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.5
XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum] 23 9.9
>M.Javanica_Scaff15495g072475 on XP_802978 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 340
Score = 23.5 bits (49), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 42/122 (34%), Gaps = 11/122 (9%)
Query: 4 LNET----LNYNSSTVQPATSNTSRRRLPTAISIESEERPDLRTVHLFNGEEEGDDNDAG 59
LNET LN N ++ P ++ T+ +E P TV AG
Sbjct: 169 LNETEIGALNANKVSIPPPERKPAKEVAATSPPVE----PANDTVTTNAQATAPAPTPAG 224
Query: 60 NVP---YTLTVREVESGGSCCQGEASQQQPDGTTKERLPKCEHKGRHVNKQIELVHRVWN 116
P TL V SGG+ + Q + R + +K R + HR
Sbjct: 225 PQPTDQATLDASSVPSGGAPSATARGRAQQSPNKRRRAQQSPNKRRRAQQSPNKRHRAQQ 284
Query: 117 SP 118
SP
Sbjct: 285 SP 286
>M.Javanica_Scaff15495g072475 on XP_001350797 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2287
Score = 23.1 bits (48), Expect = 9.9, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 10/53 (18%)
Query: 9 NYNSSTV-------QPATSNTSRRRLPTAISIESEERPDLRTVH---LFNGEE 51
+Y+S T+ P+ N PT + +++P + ++H L+ GEE
Sbjct: 1966 DYSSGTIPTNTNNTTPSHDNVDNNTHPTMSRLNVDQKPFITSIHDRDLYTGEE 2018
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15093g071526
(172 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 5.0
XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum] 24 5.3
XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 7.9
>M.Javanica_Scaff15093g071526 on XP_816557 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 834
Score = 24.3 bits (51), Expect = 5.0, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 7/39 (17%)
Query: 75 VAGSTTPNSRGGAQSEDINFGNSNLSDSGDPLSSSNNSA 113
V G T NS GG QSE I +G+ +PL S +SA
Sbjct: 240 VVGEVT-NSTGGKQSERIEWGDP------EPLPKSVSSA 271
>M.Javanica_Scaff15093g071526 on XP_001351564 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2207
Score = 24.3 bits (51), Expect = 5.3, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 69 NTFTSSVAGSTTPNSRGGAQSE 90
NT TS V+G TTP + ++SE
Sbjct: 943 NTETSQVSGETTPQGQTPSESE 964
>M.Javanica_Scaff15093g071526 on XP_819146 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 23.5 bits (49), Expect = 7.9, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 12/94 (12%)
Query: 19 STNLLNQPTSEHSPNSTQKLISHRPPLSMATNTSSNEFIVDYDNNYDATTNTFTSSVAGS 78
+T +++ P++ S QK +S P N S+ A++ +V G
Sbjct: 718 NTLMVDTPSTVVSGPVAQKTVSVSTPGGFTVNHESS-----------ASSGEVAETVGG- 765
Query: 79 TTPNSRGGAQSEDINFGNSNLSDSGDPLSSSNNS 112
T G S+D + L+ S LS NNS
Sbjct: 766 TNAQGEEGIHSQDGEVNAAALNSSPGNLSQGNNS 799
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff140g002495
(54 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAW71454 Histo-aspartic protease (Proteases) [Plasmodium falc... 21 7.9
AAW71455 Histo-aspartic protease (Proteases) [Plasmodium falc... 21 7.9
AAW71456 Histo-aspartic protease (Proteases) [Plasmodium falc... 21 7.9
AAW71457 Histo-aspartic protease (Proteases) [Plasmodium falc... 21 7.9
AAW71458 Histo-aspartic protease (Proteases) [Plasmodium falc... 21 7.9
>M.Javanica_Scaff140g002495 on AAW71454 Histo-aspartic protease (Proteases) [Plasmodium
falciparum]
Length = 451
Score = 20.8 bits (42), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 6 FNFSFSNGQNKIWVKYFFFYGERCSIK 32
FNF F + +WV E C K
Sbjct: 152 FNFLFHTASSNVWVPSIKCTSESCESK 178
>M.Javanica_Scaff140g002495 on AAW71455 Histo-aspartic protease (Proteases) [Plasmodium
falciparum]
Length = 451
Score = 20.8 bits (42), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 6 FNFSFSNGQNKIWVKYFFFYGERCSIK 32
FNF F + +WV E C K
Sbjct: 152 FNFLFHTASSNVWVPSIKCTSESCESK 178
>M.Javanica_Scaff140g002495 on AAW71456 Histo-aspartic protease (Proteases) [Plasmodium
falciparum]
Length = 451
Score = 20.8 bits (42), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 6 FNFSFSNGQNKIWVKYFFFYGERCSIK 32
FNF F + +WV E C K
Sbjct: 152 FNFLFHTASSNVWVPSIKCTSESCESK 178
>M.Javanica_Scaff140g002495 on AAW71457 Histo-aspartic protease (Proteases) [Plasmodium
falciparum]
Length = 451
Score = 20.8 bits (42), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 6 FNFSFSNGQNKIWVKYFFFYGERCSIK 32
FNF F + +WV E C K
Sbjct: 152 FNFLFHTASSNVWVPSIKCTSESCESK 178
>M.Javanica_Scaff140g002495 on AAW71458 Histo-aspartic protease (Proteases) [Plasmodium
falciparum]
Length = 451
Score = 20.8 bits (42), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 6 FNFSFSNGQNKIWVKYFFFYGERCSIK 32
FNF F + +WV E C K
Sbjct: 152 FNFLFHTASSNVWVPSIKCTSESCESK 178
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15079g071493
(551 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828097 VSG (Establishment) [Trypanosoma brucei] 30 0.40
XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum] 25 9.7
>M.Javanica_Scaff15079g071493 on XP_828097 VSG (Establishment) [Trypanosoma brucei]
Length = 520
Score = 30.0 bits (66), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 22/117 (18%)
Query: 150 DLTGIVHRE----WRYVPLPKSLEEANTCFDNEGKRRQNGEEWIVGTYFVMLCHQVLSNQ 205
D TG ++ ++ +P KSLE+A T +N K+ + L Q
Sbjct: 326 DYTGYFSKQAGKTYKDIPWLKSLEDAVTALENMHKQEEKANN--------------LDAQ 371
Query: 206 SSWLIMQVEII--ACLREDLKTRIPVGSEV--EETPGRFLVCRRADSDPTGIVWREW 258
+ L+ Q +I A L DL T V +EV E P + + C + D++ T + +W
Sbjct: 372 LANLLKQANLIYAAALNGDLMTETAVKAEVVPEGNPRQNVNCAQHDNNKTCVSPCKW 428
>M.Javanica_Scaff15079g071493 on XP_966307 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2238
Score = 25.4 bits (54), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 456 HVAQSRNSTTSSVSTNISDSNNEMKNWCFDKKIDTQLDHQNFVFLCSSPDA---IPKLVA 512
+ S N+TT+S + + NN + DTQ D QN +P+ IPK +
Sbjct: 1861 NTTASGNNTTASGNNTTASGNNTTASGNNTTASDTQNDIQNDGIPSDTPNTPSDIPKTPS 1920
Query: 513 CLPPQLNGGKINS 525
PP + + N+
Sbjct: 1921 DTPPPITDDEWNT 1933
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14869g070968
(616 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum] 28 2.1
>M.Javanica_Scaff14869g070968 on XP_001347692 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2994
Score = 28.1 bits (61), Expect = 2.1, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 243 TVVMEWKVDEV-PTTERTSFVDTESLHFNETEIKKLQNGEEKA---RQSDNKMQTSPLAD 298
T ++ +D + P TERT+ DT F E + + G A +D KM +
Sbjct: 997 TEAVKTNIDRIFPPTERTN--DTIRKEFWEKNAESIWQGMLCALSYNSNDKKMDPDVQKE 1054
Query: 299 FNSSSVSEAILIWIEDRLINDLLKQFRWDVQWINEF-KKLQNGEEK 343
NS+ + I +ED + + RW ++W +EF ++ + EEK
Sbjct: 1055 LNSTYNYDTIKNNLED--FANRPQFLRWFIEWSDEFCRERKKKEEK 1098
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff130g002361
(552 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_828106 VSG (Establishment) [Trypanosoma brucei] 26 4.9
CAA05261 PfSUB1 (Proteases) [Plasmodium falciparum] 26 6.7
XP_001611900 variant erythrocyte surface antigen-1, alpha subun... 26 8.0
>M.Javanica_Scaff130g002361 on XP_828106 VSG (Establishment) [Trypanosoma brucei]
Length = 478
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 226 LPPQTYSPYFPQSTNYLQNYN 246
LPPQ P F +T ++NYN
Sbjct: 272 LPPQAEDPAFTNTTGEIKNYN 292
>M.Javanica_Scaff130g002361 on CAA05261 PfSUB1 (Proteases) [Plasmodium falciparum]
Length = 689
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 343 DISSLINLNNTLLSLKEHS-----FKFKRQIPSKPIVSPFNQQQNKNNIRVSPLKGTAYE 397
++S+L N+N+ ++ LKE + + + + K + ++ + +NI +S +K
Sbjct: 172 NLSNLKNINSMIIELKEDTTDDELISYIKILEEKGALIESDKLVSADNIDISGIKDAIRR 231
Query: 398 GQDNI 402
G++NI
Sbjct: 232 GEENI 236
>M.Javanica_Scaff130g002361 on XP_001611900 variant erythrocyte surface antigen-1, alpha subunit
(Establishment) [Babesia bovis]
Length = 1226
Score = 25.8 bits (55), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 240 NYLQNYNNNPLNDYQNYPFSNQFNQKLRQQQLSYLNKDLIFNNCPPTYNEQSLHFPSSLY 299
N+ + ++N N ++ N + ++ +K ++FNN + E+++H +LY
Sbjct: 398 NFAVHGHDNHANTFRQPAGMNYAGYIHTMDKGAFCSKAIVFNNGTTSITEENIHKCGALY 457
Query: 300 PQY 302
Y
Sbjct: 458 KLY 460
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15522g072554
(238 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.054
XP_816764 Trans-sialidase (Invasion) [Trypanosoma cruzi] 31 0.076
XP_628559 gp900 (Adhesin) [Cryptosporidium parvum] 26 3.2
XP_001609539 variant erythrocyte surface antigen-1, beta subuni... 25 4.1
XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 7.2
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 24 9.7
>M.Javanica_Scaff15522g072554 on XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 31.2 bits (69), Expect = 0.054, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 165 QTGDFSNKGKLPIVCEVEGNLFNQEEEECNNCED 198
+ G+ N + P++ EV GNLF E +CN +D
Sbjct: 88 KDGETMNSLRAPVLVEVNGNLFAVAEAQCNEAQD 121
>M.Javanica_Scaff15522g072554 on XP_816764 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 868
Score = 30.8 bits (68), Expect = 0.076, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 165 QTGDFSNKGKLPIVCEVEGNLFNQEEEECNNCED 198
+ G+ N + P++ EV GNLF E +CN +D
Sbjct: 88 KDGETMNSLRAPVLVEVNGNLFAVAEAQCNEAQD 121
>M.Javanica_Scaff15522g072554 on XP_628559 gp900 (Adhesin) [Cryptosporidium parvum]
Length = 1937
Score = 25.8 bits (55), Expect = 3.2, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
Query: 154 DNNEGNSLVNPQTGDFSNKGKLPIVCEVEGNLFNQEEEECNNCEDDQNQVEVEEPNKILE 213
D + G + N G S K LP + + GNLF + N D NQ+ E N +
Sbjct: 1284 DPSTGKPINNSTAGIVSGKPGLPPIEDENGNLF---DPSTNLPIDGNNQLVNPETNSTVS 1340
Query: 214 DDSNNMEANKKIYPFDLNEKPEDEE 238
++ K P + DEE
Sbjct: 1341 GSTSGTTKPKPGIPVNGGGVVPDEE 1365
>M.Javanica_Scaff15522g072554 on XP_001609539 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 884
Score = 25.4 bits (54), Expect = 4.1, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 8/56 (14%)
Query: 66 NKEYYQK--------NKERILENKRNYRKQNKEKINEYKQNYYKIHESKLKNDNKT 113
N E+ QK KE I N+ K + EY Y + LK DNKT
Sbjct: 305 NGEFVQKLLSGKQPNGKEGIQWNEFQGDSAEKNSVAEYYSTIYDKAKEALKKDNKT 360
>M.Javanica_Scaff15522g072554 on XP_804289 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1048
Score = 24.6 bits (52), Expect = 7.2, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 15/63 (23%)
Query: 151 VQSDNNEGNSLVNPQTG----------DF-----SNKGKLPIVCEVEGNLFNQEEEECNN 195
V +D ++ S+++P TG DF S ++P + EV+G+LF E C +
Sbjct: 62 VAADGSKTRSIIDPFTGTTSISFANWKDFEINTESASLRVPSLVEVQGHLFAIAEAHCRD 121
Query: 196 CED 198
D
Sbjct: 122 GGD 124
>M.Javanica_Scaff15522g072554 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 24.3 bits (51), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 96 KQNYYKIHESKLKNDNKTYYQKNRETILKKQKIYQQNNKEKRNEYM 141
K+ + +IH K D +TYY +N K ++ + N+ E M
Sbjct: 224 KEIFKEIHSGLTKKDAQTYYDENGGNFFKLREDWWTANRHTVWEAM 269
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13252g066882
(116 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_819342 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_818091 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.9
XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 4.7
XP_803132 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.8
XP_820473 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 9.5
>M.Javanica_Scaff13252g066882 on XP_819342 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 825
Score = 24.6 bits (52), Expect = 1.8, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 14 SSPKQWDWPLQHNDGVVKVQENSDNWEVD 42
+S + W++ L D +VK + NWE +
Sbjct: 571 TSERNWNFTLHKKDFLVKPSGDVGNWETN 599
>M.Javanica_Scaff13252g066882 on XP_818091 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 828
Score = 24.6 bits (52), Expect = 1.9, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 14 SSPKQWDWPLQHNDGVVKVQENSDNWEVD 42
+S + W++ L D +VK + NWE +
Sbjct: 574 TSERNWNFTLHKKDFLVKPSGDVGNWETN 602
>M.Javanica_Scaff13252g066882 on XP_819490 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 997
Score = 23.5 bits (49), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Query: 91 DDLDRNTIKSHLMQNGVLRVTAKKR 115
+ LDR K H +QNG ++VT +K+
Sbjct: 305 NSLDR---KGHGVQNGFIKVTIEKK 326
>M.Javanica_Scaff13252g066882 on XP_803132 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 721
Score = 22.7 bits (47), Expect = 6.8, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 14 SSPKQWDWPLQHNDGVVKVQENSDNWEVD 42
+S + W++ L + +VK + NWE +
Sbjct: 577 TSERNWNFTLHKKEFLVKPSGDVGNWETN 605
>M.Javanica_Scaff13252g066882 on XP_820473 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 22.3 bits (46), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 14 SSPKQWDWPLQHNDGVVKVQENSDNWE 40
+S + W++ L D +VK + NWE
Sbjct: 578 TSERNWNFTLHKKDFLVKPSGDVGNWE 604
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16045g073732
(96 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_829779 VSG (Establishment) [Trypanosoma brucei] 23 6.0
XP_803417 VSG (Establishment) [Trypanosoma brucei] 22 7.0
>M.Javanica_Scaff16045g073732 on XP_829779 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 22.7 bits (47), Expect = 6.0, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 11 SLLILAIIIQNNQINTLTIPDKQLKWVFKPVPADISILSNDEIRGIITPQ---RRTHNPN 67
S+ L+ +++ ++NT P Q + V +PA S L+ D + + + + +NP
Sbjct: 325 SMRALSQLLKKGKVNTKEEPTSQTEAVKALLPAGESTLTADLVDPLENEEITYDKDNNPV 384
Query: 68 KRM 70
K M
Sbjct: 385 KTM 387
>M.Javanica_Scaff16045g073732 on XP_803417 VSG (Establishment) [Trypanosoma brucei]
Length = 540
Score = 22.3 bits (46), Expect = 7.0, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 9 SFSLLILAIIIQNNQINTLTIPDKQLKWVF--KPVPADISILSNDEIRGIITPQR 61
+F+ L+ A+I + T+P ++ W F + V A ++ + IT R
Sbjct: 77 AFTKLLRALIYAQANLTRRTLPKEKAAWFFLGEEVAAGLAYFKGGKAAADITAAR 131
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14970g071216
(61 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAA05261 PfSUB1 (Proteases) [Plasmodium falciparum] 23 1.6
XP_821526 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.0
XP_811704 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 2.2
XP_805247 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.8
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 21 7.7
XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi] 21 9.8
>M.Javanica_Scaff14970g071216 on CAA05261 PfSUB1 (Proteases) [Plasmodium falciparum]
Length = 689
Score = 22.7 bits (47), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 1 MNKKLFFLTTLSIHVFLF 18
+NKK+ L TL++H+F
Sbjct: 2 LNKKVVALCTLTLHLFCI 19
>M.Javanica_Scaff14970g071216 on XP_821526 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 983
Score = 22.7 bits (47), Expect = 2.0, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 2 NKKLFFLTTLSIHVFLFDKSSAKVVLRAKRAEEPEPTNIETFPTSTTEEGK 52
N+K + T+SIH + SS+ + L + E + T I F S T + K
Sbjct: 565 NEKFTLMATVSIHKVPTEGSSSPIPLMGVKLSETDSTLI--FGLSYTHDKK 613
>M.Javanica_Scaff14970g071216 on XP_811704 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 745
Score = 22.7 bits (47), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 30 KRAEEPEPTNIETFP 44
K+A P PT +ET P
Sbjct: 728 KKATAPAPTTVETLP 742
>M.Javanica_Scaff14970g071216 on XP_805247 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 870
Score = 22.3 bits (46), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 31 RAEEPEPTNIETFPT 45
+A P PT +ET PT
Sbjct: 729 KATAPAPTTVETLPT 743
>M.Javanica_Scaff14970g071216 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 21.2 bits (43), Expect = 7.7, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 17 LFDKSSAKVVLRAKRAEEPEPTNIETFPTSTT 48
LF K K+ ++ +P N T PTS T
Sbjct: 1781 LFQKIQKKIEECKQKHPQPSANNCTTSPTSDT 1812
>M.Javanica_Scaff14970g071216 on XP_817637 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 986
Score = 20.8 bits (42), Expect = 9.8, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 30 KRAEEPEPTNIETFPTSTTEEGKSDNNIITTE 61
KR EEP ++ T + S NN++ E
Sbjct: 713 KRNEEPHGSHAALGNGDTERQNTSPNNVLAPE 744
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1469g015943
(118 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1455g015846
(228 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_820662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.8
>M.Javanica_Scaff1455g015846 on XP_820662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 25.8 bits (55), Expect = 2.8, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 8/82 (9%)
Query: 25 TFANTKSS--NTQKLNLSQFIPEDAQQNQNPEAFANKGFGDTQKVDLNQFITEDAKQNTD 82
T NTK S ++ + P +A + PEA G G Q+ + + T + +
Sbjct: 734 TALNTKLSIPEAREAKTVEVTPPEASKQATPEAATPSGLGGQQRTEQDPLRTSENAGSGV 793
Query: 83 LVES------NFGKIKSHQEQS 98
L S NF K ++QS
Sbjct: 794 LSTSAASTATNFPAAKESEDQS 815
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15614g072753
(158 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAD90580 SRA (Others) [Trypanosoma brucei] 24 3.8
CAD90581 SRA (Others) [Trypanosoma brucei] 24 3.9
>M.Javanica_Scaff15614g072753 on CAD90580 SRA (Others) [Trypanosoma brucei]
Length = 160
Score = 23.9 bits (50), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 124 YRPAGNVITRCVYN 137
Y A N++TRCV N
Sbjct: 91 YAAASNIVTRCVLN 104
>M.Javanica_Scaff15614g072753 on CAD90581 SRA (Others) [Trypanosoma brucei]
Length = 160
Score = 23.9 bits (50), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 124 YRPAGNVITRCVYN 137
Y A N++TRCV N
Sbjct: 91 YAAASNIVTRCVLN 104
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14641g070385
(155 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum] 27 0.39
XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum] 25 3.4
XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum] 24 4.1
>M.Javanica_Scaff14641g070385 on XP_001350798 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2359
Score = 27.3 bits (59), Expect = 0.39, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 66 KDWIDKQTPEIQAKYAKFEAAKSKAEVEAEKLHQ--AAIAKFSSAAKEADAKLSAIAKN 122
K WI ++ E +Y + K+K + E+E + + F+ AAK + S KN
Sbjct: 1448 KKWIQRKKEEFTEQYNAYGGQKTKCQTESETAKEFCGTLNTFNDAAKFLERLKSGPCKN 1506
>M.Javanica_Scaff14641g070385 on XP_001350936 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2163
Score = 24.6 bits (52), Expect = 3.4, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 30/49 (61%), Gaps = 8/49 (16%)
Query: 40 QNLITEFHQLLIKSGQ-KTDGEIEQLVKD----WIDKQT---PEIQAKY 80
QN + +++++ K + +GE+ + +KD W++K+T P+I+ +Y
Sbjct: 1478 QNFLDDYNKIRTKLKPCRNNGEVSKCIKDCVKKWVEKKTEEWPKIRDRY 1526
>M.Javanica_Scaff14641g070385 on XP_001349030 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 24.3 bits (51), Expect = 4.1, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 63 QLVKDWIDKQTPEIQAKYAKFEAAKSKAEVE 93
+L K WI+K+ E + + +E KS E E
Sbjct: 1284 RLYKTWIEKKKTEYEKQKKAYEEQKSNYENE 1314
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14356g069694
(121 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_815662 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 2.4
XP_810286 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.4
XP_812514 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.0
XP_807549 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 8.7
>M.Javanica_Scaff14356g069694 on XP_815662 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 963
Score = 24.3 bits (51), Expect = 2.4, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 4 IGPAGNDFSNNLASSLIFEFMTQTSMKKDFIDEQLCTEASIYLNEQTDGE 53
IGP ND + ASSL+++ K++ I ++Y ++ DG+
Sbjct: 428 IGPVSNDDDDAAASSLLYKSGKSEDKKEELI--------ALYEKKKGDGK 469
>M.Javanica_Scaff14356g069694 on XP_810286 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 846
Score = 23.9 bits (50), Expect = 3.4, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 4 IGPAGNDFSNNLASSLIFEFMTQTSMKKDFIDEQLCTEASIYLNEQTDGE 53
IGP ND + ASSL+++ K++ I ++Y ++ DG+
Sbjct: 309 IGPVSNDDDDAAASSLLYKSGKSEDKKEELI--------ALYEKKKGDGK 350
>M.Javanica_Scaff14356g069694 on XP_812514 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 925
Score = 23.1 bits (48), Expect = 6.0, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 4 IGPAGNDFSNNLASSLIFEFMTQTSMKKD 32
IGP D + ASSL++ T+ K+D
Sbjct: 407 IGPVSGDDDDAAASSLLYNSGENTNEKED 435
>M.Javanica_Scaff14356g069694 on XP_807549 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 894
Score = 22.7 bits (47), Expect = 8.7, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 4 IGPAGNDFSNNLASSLIFEFMTQTSMKKDFIDEQLCTEASIYLNEQTDGEIIASFEGVKL 63
IGP D + ASSL+++ K++ I ++Y N++ D E V+L
Sbjct: 414 IGPVSGDDEDAAASSLLYKSAEGEDRKEELI--------ALYENKKGDEEKSLGMVSVRL 465
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15020g071334
(59 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1410g015466
(141 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum] 23 8.7
>M.Javanica_Scaff1410g015466 on XP_001349034 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2215
Score = 23.1 bits (48), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 20 CSGKLISIKVKIN---DDWEE-KREFIYLKIVELKERFIVEIIEKRNNQRDSLNKNIEPF 75
C K +K IN +WEE K+ ++ E + V+ I ++ + K I P
Sbjct: 1535 CKKKCDCVKAWINLKTKEWEEIKKPYLEQYKNGYGENYNVKTILEKFQDQPEFKKAIGPC 1594
Query: 76 LHKVELTGNIFRVKLTGATKSASDQLKERIVIEITNNEIIKNLFPSLEKRKISSVPFREF 135
+ + +I GA +S + K+R ++E L LEK+ E
Sbjct: 1595 PNLGQFEDSIH---CNGAARS--ENGKKRDIVEC--------LLQKLEKKAEKCQNQNET 1641
Query: 136 RCDTP 140
CDTP
Sbjct: 1642 ACDTP 1646
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13153g066607
(124 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi] 25 1.8
XP_815822 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 3.2
XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.0
XP_802709 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.7
XP_813421 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.8
XP_813123 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 5.9
>M.Javanica_Scaff13153g066607 on XP_821390 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 940
Score = 24.6 bits (52), Expect = 1.8, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 59 YNRCRIVGDLRISRSGSDIRPK 80
+NRCR+ G + R G + P+
Sbjct: 14 HNRCRVTGSSGMRREGRESEPQ 35
>M.Javanica_Scaff13153g066607 on XP_815822 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 884
Score = 23.9 bits (50), Expect = 3.2, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 8/40 (20%)
Query: 59 YNRCRIVGDLRISRSGSDIRPKIFGYPAFSDPDIWTRXFA 98
+NRCR+ G R G + P+ P++ R FA
Sbjct: 70 HNRCRVTGSSGRRREGRESEPR--------RPNMSRRVFA 101
>M.Javanica_Scaff13153g066607 on XP_818708 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 929
Score = 23.9 bits (50), Expect = 4.0, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 87 FSDPDIWTRXFA-PDDFCAATIVNNYK 112
FSDP+IWT DD C V +K
Sbjct: 281 FSDPEIWTLSKGMSDDGCGDPSVVEWK 307
>M.Javanica_Scaff13153g066607 on XP_802709 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 626
Score = 23.5 bits (49), Expect = 5.7, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 59 YNRCRIVGDLRISRSGSDIRPK 80
+NRCR+ G R G + P+
Sbjct: 14 HNRCRVTGSSGRRREGGESEPQ 35
>M.Javanica_Scaff13153g066607 on XP_813421 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 746
Score = 23.5 bits (49), Expect = 5.8, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 59 YNRCRIVGDLRISRSGSDIRPK 80
+NRCR+ G R G + P+
Sbjct: 14 HNRCRVTGSSGRRREGGESEPQ 35
>M.Javanica_Scaff13153g066607 on XP_813123 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1048
Score = 23.5 bits (49), Expect = 5.9, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 59 YNRCRIVGDLRISRSGSDIRPK 80
+NRCR+ G R G + P+
Sbjct: 14 HNRCRVTGSSGRRREGGESEPQ 35
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff16084g073815
(107 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum] 25 1.2
XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi] 23 6.3
XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.7
XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum] 23 6.7
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 23 7.9
XP_815845 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 10.0
>M.Javanica_Scaff16084g073815 on XP_001351876 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3164
Score = 25.0 bits (53), Expect = 1.2, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 24 NVQNMNDLQRNHLIEREFPGENILN 48
N QN +DL N L+ ++ G++I+N
Sbjct: 153 NTQNCDDLLGNILVAAKYEGQSIVN 177
>M.Javanica_Scaff16084g073815 on XP_819344 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 861
Score = 22.7 bits (47), Expect = 6.3, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 43 GENILNTESQLQRQVHTMDEEMLGRVEAQLMGAMEMLQNYRAAS 86
GE T+ Q + ++H D E+ + + +G + N A +
Sbjct: 797 GETAGRTDGQKREEIHAQDRELNAKALSSSLGNVSQGNNSDAGT 840
>M.Javanica_Scaff16084g073815 on XP_001351561 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 22.7 bits (47), Expect = 6.7, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 74 GAMEMLQNYRAASSPAKFTEKRKNNKFEFIRFG 106
G + +Q +A + F + +K+N +E + FG
Sbjct: 2534 GKDKKIQQVKATDNTDLFQKLKKDNDYETVSFG 2566
>M.Javanica_Scaff16084g073815 on XP_001348946 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 3553
Score = 22.7 bits (47), Expect = 6.7, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 74 GAMEMLQNYRAASSPAKFTEKRKNNKFEFIRFG 106
G + +Q +A + F + +K+N +E + FG
Sbjct: 2534 GKDKKIQQVKATDNTDLFQKLKKDNDYETVSFG 2566
>M.Javanica_Scaff16084g073815 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 22.7 bits (47), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 18 SLTLAINVQNMNDLQRNHLIEREFPGENILNTESQL 53
+L + IN N N+ HL+ ++ +NILN + ++
Sbjct: 945 TLNIGINACNTNNKNVEHLLNKKIELKNILNDQMKI 980
>M.Javanica_Scaff16084g073815 on XP_815845 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 936
Score = 22.3 bits (46), Expect = 10.0, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 43 GENILNTESQLQRQVHTMDEEMLGRVEAQLMGAMEMLQNYRAAS 86
GE + T+ Q + +H D E+ + +G + N A +
Sbjct: 872 GETVGGTDGQKREDIHAQDGEVKAAALSSSLGNLSQRNNSDAGT 915
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1304g014611
(305 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff1307g014639
(650 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi] 29 0.92
XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 1.8
XP_821902 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 2.6
XP_804892 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.0
XP_822026 Trans-sialidase (Invasion) [Trypanosoma cruzi] 27 5.9
XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 7.5
XP_846273 VSG (Establishment) [Trypanosoma brucei] 26 8.3
XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 9.5
>M.Javanica_Scaff1307g014639 on XP_821137 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 956
Score = 29.3 bits (64), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 473 PTSTIKIRVETTTLAL-----PTTVTEESTMLPSTQSLPSAKGPST------SKIDDSET 521
P S+ KI T L++ TV E + S Q+ P A+ PS +K D
Sbjct: 737 PLSSEKITALNTKLSISKAREAKTVKEGIPPVASKQATPEAETPSILGEQQQNKQDPLRK 796
Query: 522 TKEPGVSTIQQANSASSITTPKAL---------VPPNSPRHISKSPSSTSNPLPITVPGE 572
++ G + + ++ T+P A P+ +++ +PSS ++P +TV G
Sbjct: 797 SENAGSGGLSTSGLPTATTSPAAKESEKQSASGTSPSGNKNVDGTPSSDADPAVVTVSG- 855
Query: 573 MKKDLPNVAQADTTPLPSTA 592
N Q D T PS
Sbjct: 856 ------NTGQGDGTQKPSVG 869
>M.Javanica_Scaff1307g014639 on XP_810574 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 954
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 14/67 (20%)
Query: 40 KKVNGNREEENKSRNSNPKLKYKMRISFTPRYELACLTLGC--------------ICQYY 85
++V G+ + R S P+ + R F L L C +C Y
Sbjct: 50 RRVTGSHGRRREGRESEPRRPHMSRRVFASAVLLLLFALTCAAVGPVQAQSFGTRVCDSY 109
Query: 86 GGKSSNR 92
GG+SS +
Sbjct: 110 GGRSSEQ 116
>M.Javanica_Scaff1307g014639 on XP_821902 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Query: 37 NYCKKVNGNREEENKSRNSNPKLKYKMRISFTPRYELACLTLGCICQYYGGKSSNRLTND 96
N C+ V G+ + R S P+ + R F L + + C S +N+
Sbjct: 15 NRCR-VTGSSGRRREGRESEPQRPHMSRHLFYSAVLLVLVVMMFCC------GSGAASNE 67
Query: 97 CTLSNGQKLKKAKRKEWRMLTDQEKMETFAAFAEMKKNGEFDYLASLHKTAFEAGKWHGC 156
TL++ +L K K WR TD+ +++ + +K NG+ +A T G + G
Sbjct: 68 KTLTD-SELPKRKLFVWRDTTDEVTVDSLRVPSLLKVNGDVFAVAEALFTRGVEGSFAGI 126
Query: 157 TS 158
S
Sbjct: 127 AS 128
>M.Javanica_Scaff1307g014639 on XP_804892 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 1046
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 9/108 (8%)
Query: 449 PTTTPLPTTTPLPTTTPLPTTTPLPTSTIKIRVETTTLALPTTVTEESTMLPS---TQSL 505
P+T ++ P P T LP I++ + T +ES S TQ L
Sbjct: 771 PSTVVAGSSVPKPATAAESAENSLPDDNIQLSGGEKSQQFTPTGEKESMQRDSDAQTQDL 830
Query: 506 PSAKGPS------TSKIDDSETTKEPGVSTIQQANSASSITTPKALVP 547
SA+ +S+ +D+E T E G + + + SS+ + P
Sbjct: 831 QSAESTEFNDVEMSSESNDTEQTVEEGEANDKSGGTTSSVAVSSDMDP 878
>M.Javanica_Scaff1307g014639 on XP_822026 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 888
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 3/101 (2%)
Query: 525 PGVSTIQQANSASSITTPKALVPPNSPRHISKSPS---STSNPLPITVPGEMKKDLPNVA 581
P V+ Q SS L P S + S STS +++P K + VA
Sbjct: 741 PSVAATAQITGTSSTPAGTHLTEQGQPMGSSGADSGGASTSAVSAVSIPSAGKDSVKQVA 800
Query: 582 QADTTPLPSTATTFSKITGPNPIERKSTPTTKKVQNTTPCN 622
T+ T S G +E++ T + + P N
Sbjct: 801 SGKTSDGAQTVDGGSTADGQPTMEKREGGTDGQKEEVQPHN 841
>M.Javanica_Scaff1307g014639 on XP_815148 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 882
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 543 KALVPPNSPRHISKSPS-STSNPLPITVPGEMKKDLPNVAQADTTPLPSTATTFSKITGP 601
KA PP P ++ + S S+S P + G++K + A +TP STA S G
Sbjct: 705 KASSPPVVPDNVQGTLSLSSSAGQPPSEQGQLKGSIAAGAGDASTPATSTAAASS---GQ 761
Query: 602 NPIER---KSTPTTKKVQNTTPC 621
P+++ ++P+ K + TP
Sbjct: 762 EPVKQLTSGTSPSGNKNADGTPS 784
>M.Javanica_Scaff1307g014639 on XP_846273 VSG (Establishment) [Trypanosoma brucei]
Length = 490
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 605 ERKSTPTTKKVQNTTPCNPIKLSTREE 631
E+K TT+KV TT CN T EE
Sbjct: 383 EKKQAKTTQKVSKTTDCNKQTEKTAEE 409
>M.Javanica_Scaff1307g014639 on XP_821910 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 853
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 40 KKVNGNREEENKSRNSNPKLKYKMRISFTPRYELACLTLGCICQYYGGKSSNRLTNDCTL 99
++V G+ + R S P+ R F L + + C S +N+ TL
Sbjct: 17 RRVTGSSGRRREGRESEPQRPNMSRHLFYSAVLLVLVVMMFCC------GSGAASNEKTL 70
Query: 100 SNGQKLKKAKRKEWRMLTDQEKMETFAAFAEMKKNGEFDYLASLHKTAFEAGKWHGCTS 158
++ +L K K WR TD+ +++ + +K NG+ +A T G + G S
Sbjct: 71 TD-SELPKRKLFVWRDTTDEVTVDSLRVPSLLKVNGDVFAVAEALFTRGVEGSFTGIAS 128
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff152g002662
(62 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum] 25 0.26
XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum] 23 1.7
XP_817820 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 4.3
>M.Javanica_Scaff152g002662 on XP_001350410 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2178
Score = 25.0 bits (53), Expect = 0.26, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 27 KIW-SIREKYFYSLSSNKANCYKITGYRGLLNDP 59
K W +IRE+Y ++ ++ YK+T + L DP
Sbjct: 1476 KEWETIRERYVKQYTTGHSDIYKVTSF---LEDP 1506
>M.Javanica_Scaff152g002662 on XP_001351435 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2209
Score = 22.7 bits (47), Expect = 1.7, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 31 IREKYFYSLSSNKANCYKITGYRGLLNDP 59
IRE+Y Y++S+N +G + ++P
Sbjct: 1945 IREEYSYNMSTNSGGNGSYSGISPISDNP 1973
>M.Javanica_Scaff152g002662 on XP_817820 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 896
Score = 21.9 bits (45), Expect = 4.3, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 40 SSNKANCYKITGYRGLLNDPVGS 62
+ NK NC ++TG G + GS
Sbjct: 64 APNKHNCRRVTGSSGRRREGRGS 86
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14263g069458
(58 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_803151 Trans-sialidase (Invasion) [Trypanosoma cruzi] 22 2.6
>M.Javanica_Scaff14263g069458 on XP_803151 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 755
Score = 22.3 bits (46), Expect = 2.6, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 10 GDEYSAGDENSENVGDESSEKPWRRMF 36
G S GD NS+ + E +E +R+F
Sbjct: 83 GSVNSGGDTNSKKIDWEVTESSPQRLF 109
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15785g073156
(257 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_806454 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.48
XP_001348165 RESA (Others) [plasmodium falciparum] 27 1.9
XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum] 26 2.8
XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 3.1
XP_829791 VSG (Establishment) [Trypanosoma brucei] 25 6.1
XP_001608664 variant erythrocyte surface antigen-1, beta subuni... 25 7.9
>M.Javanica_Scaff15785g073156 on XP_806454 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 694
Score = 28.1 bits (61), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 12/112 (10%)
Query: 155 WDVNSNSCGYFQLKEN--YYHDCGEPMRESGESLDSAWKRCS-------GNYRCSVKCIQ 205
W++N +E Y + GEP+R SG+ L S + G+Y S +
Sbjct: 560 WELNKTYHVVLAFEEGVGYIYVDGEPLRGSGQRLTSVQLKSMEISHFSIGSYGTSDRGTD 619
Query: 206 SNPEPEFGLLTPNRTFDPEHCRTLYKMASLSKETRTHRAGSNDTKINEIRPD 257
S LL NR +P +TL+ +SK T + +N+ I ++ D
Sbjct: 620 SQITVTHVLLY-NRRIEPSEVQTLF--LGISKIVATSESMANEMVIQKMMLD 668
>M.Javanica_Scaff15785g073156 on XP_001348165 RESA (Others) [plasmodium falciparum]
Length = 1085
Score = 26.6 bits (57), Expect = 1.9, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 156 DVNSNSCGYFQLKENYYHDCGEPMRESGESLDSAWKRCSGNYR 198
D+N + YF+L ENYY P + SG ++ +++ + Y+
Sbjct: 535 DMNEITERYFKLAENYY-----PYQRSGSTVFHNFRKVNEAYQ 572
>M.Javanica_Scaff15785g073156 on XP_001350935 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2268
Score = 25.8 bits (55), Expect = 2.8, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 71 NTGGGGYDGGGGGRGGEDGDYSGEGG 96
N GGG G G GG +G SG+G
Sbjct: 985 NAEGGGQKGARGPNGGTEGANSGKGA 1010
>M.Javanica_Scaff15785g073156 on XP_814919 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 854
Score = 25.8 bits (55), Expect = 3.1, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 52 REGCGGGCGGGGGGGIQVINTGGGGYDGGGGGRGGEDGDYSGEGGGGGGNGGG---YSAG 108
++G GG G GG + G G +G G R G+D SG+ G GG +G
Sbjct: 772 KKGSGGSEDKKGIGGAED-KKGSGDGEGKKGIRDGDDKKGSGDSEDKKGIGGAEDKKGSG 830
Query: 109 GGSGQSNLPYIF 120
GS + + ++
Sbjct: 831 DGSMREGMSWVL 842
Score = 25.4 bits (54), Expect = 4.2, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 39 GGGGGGGCGGYGGREGCGGGCGGGGGGGIQVIN--TGGGGYDGGGGGRGGEDGDYSGEG 95
G GG G GG E G G G GI+ + G G + G G ED SG+G
Sbjct: 774 GSGGSEDKKGIGGAEDKKGSGDGEGKKGIRDGDDKKGSGDSEDKKGIGGAEDKKGSGDG 832
>M.Javanica_Scaff15785g073156 on XP_829791 VSG (Establishment) [Trypanosoma brucei]
Length = 506
Score = 24.6 bits (52), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 105 YSAGGGSGQ-SNLPYIFGPQGSYAQYSDYD-EAKCLECICYHESGCKPLECRWDVNSNSC 162
+ GG G+ + P P+ + + D D +A +C E+ C +C W+ N C
Sbjct: 423 WEEKGGKGECKSKPGTETPEAATGEKKDGDNKASAADCKASSETNCDTTKCTWNKEKNEC 482
>M.Javanica_Scaff15785g073156 on XP_001608664 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1116
Score = 24.6 bits (52), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 37 CCGGGGGGGCGGYGGREGCGGGCGGG 62
CC G GG G G + C GG GGG
Sbjct: 142 CCLKGAGGESKGIGKKCKCAGGTGGG 167
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13600g067768
(286 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_805259 Trans-sialidase (Invasion) [Trypanosoma cruzi] 28 0.93
AAN75043 Aldolase (Invasion) [Toxoplasma gondii] 25 6.0
>M.Javanica_Scaff13600g067768 on XP_805259 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 800
Score = 27.7 bits (60), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 47 PDFWCDNYEIAQRCNVVQQCENFKRSTSSRPLTITLMFEALCPYCQR--YIANNLGSLLY 104
PD + ++ +V K + + PL ++ +A Y R Y A+N ++
Sbjct: 542 PDDNVRHISLSHNFTLVASVTIEKAPSENTPLLTAVLGDAGPEYFMRLSYTADNKWETMF 601
Query: 105 KFGNQTILELVPW 117
K G +T E PW
Sbjct: 602 KGGKKTTTESRPW 614
>M.Javanica_Scaff13600g067768 on AAN75043 Aldolase (Invasion) [Toxoplasma gondii]
Length = 255
Score = 24.6 bits (52), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 137 CDANRLLSCVISEVSVSQSVQFTICFE 163
C ANRL+ V E+ S T+C E
Sbjct: 179 CQANRLVPIVEPEILTDGSHDITVCAE 205
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14687g070503
(70 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_652394 Igl2 (Adhesin) [Entamoeba histolytica] 23 2.0
XP_845141 VSG (Establishment) [Trypanosoma brucei] 21 8.7
>M.Javanica_Scaff14687g070503 on XP_652394 Igl2 (Adhesin) [Entamoeba histolytica]
Length = 1105
Score = 23.1 bits (48), Expect = 2.0, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 3 LSNNNDENGEQDLSDGWSKVEDEGQSSSLSDDITRQSLNVTGESDKSVRNQSTL 56
L+NN E G +SDG+ + S+ + D T++ + K N+ L
Sbjct: 618 LNNNCKEEGHYKISDGFITCLECDDSAYIVDSQTKECAQCASNAFKDENNKCQL 671
>M.Javanica_Scaff14687g070503 on XP_845141 VSG (Establishment) [Trypanosoma brucei]
Length = 486
Score = 21.2 bits (43), Expect = 8.7, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 19 WSKVEDEGQSSSLSDDITRQSLNVTGESDKSVRNQST 55
+ K +++G+ +LSD+ + GE D N +T
Sbjct: 430 YDKTKEDGKKCTLSDEEKEAAQKEGGEKDSKTGNTNT 466
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15574g072658
(111 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
***** No hits found ******
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13094g066460
(166 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum] 27 0.50
XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum] 26 1.5
>M.Javanica_Scaff13094g066460 on XP_001350083 Rh2a (Adhesin) [Plasmodium falciparum]
Length = 3130
Score = 27.3 bits (59), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 97 WNGQCGGLANQMWRF---AVLYNMAKSVGRFPGIYNTSTWTCDKLN 139
+ G L +++ F L++ KSV I NTS C KLN
Sbjct: 689 YKGSFEELESELSHFLDTKYLFHEKKSVNELQTILNTSNNECAKLN 734
>M.Javanica_Scaff13094g066460 on XP_001351079 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2203
Score = 25.8 bits (55), Expect = 1.5, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 119 KSVGRFPGIYNTSTWTCDKLNSPNEIENT 147
K VG F G+ N T KLN E E T
Sbjct: 439 KEVGEFLGLLNNETTCTKKLNDQGEEEGT 467
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff13176g066683
(442 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 33 0.049
XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum] 28 1.4
XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum] 26 6.6
>M.Javanica_Scaff13176g066683 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 32.7 bits (73), Expect = 0.049, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 82 PTPQPPPLIVPAPQ--PPPLIVPTPQ--PPALIVPTP--NPLPLIVPAPQ 125
P P P+ P P+ P P+ PTP+ P + PTP NP P+ P P+
Sbjct: 502 PEENPEPVEKPNPEENPNPVEKPTPEENPNPVEKPTPEENPNPVEKPEPE 551
Score = 32.0 bits (71), Expect = 0.083, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
Query: 73 QKQPPPLIVPTPQ--PPPLIVPAPQ--PPPLIVPTPQPPALIVPTPNPLPLIVPAPQPHL 128
++ P P+ P P+ P P+ P P+ P P+ PTP+ PNP+ P P +
Sbjct: 503 EENPEPVEKPNPEENPNPVEKPTPEENPNPVEKPTPEE------NPNPVEKPEPEKNPCI 556
Query: 129 PLVD 132
+ D
Sbjct: 557 NMED 560
>M.Javanica_Scaff13176g066683 on XP_001350409 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2223
Score = 27.7 bits (60), Expect = 1.4, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 23/73 (31%)
Query: 77 PPLIVPTPQPP-------PLIVPAPQ-PPPLIVPTPQPPALIVPTPNPLPLIVPAPQPHL 128
P P P P P++ P + PPP P PPA PA QP
Sbjct: 1708 PAPKAPEPTQPADGGEQTPVLKPEEEAPPPAQAPDVAPPAR-----------APADQP-- 1754
Query: 129 PLVDPPVLSVYVP 141
DP +L +P
Sbjct: 1755 --FDPTILQTTIP 1765
>M.Javanica_Scaff13176g066683 on XP_001349512 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2980
Score = 25.8 bits (55), Expect = 6.6, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 215 NDIDKCLELLGNYSKPLNETPCTHAEIPGGC 245
ND++K SK L PCT+ G C
Sbjct: 1525 NDVNKSTHAYEYLSKKLTNIPCTNGNTTGKC 1555
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff15213g071804
(145 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351221 CTRP (Adhesin) [Plasmodium falciparum] 25 2.3
XP_001611737 variant erythrocyte surface antigen-1, beta subuni... 25 3.0
XP_001610720 variant erythrocyte surface antigen-1, beta subuni... 24 3.7
XP_001608664 variant erythrocyte surface antigen-1, beta subuni... 24 4.5
XP_811031 Trans-sialidase (Invasion) [Trypanosoma cruzi] 24 4.8
>M.Javanica_Scaff15213g071804 on XP_001351221 CTRP (Adhesin) [Plasmodium falciparum]
Length = 2112
Score = 25.0 bits (53), Expect = 2.3, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 12/88 (13%)
Query: 35 IMQNMGVYPPGQFGPNNLPNYQNYGQPNYQNYGQPNYQNYGQPNYQPPSMFYGQPTQYAM 94
I N V PPG P+ G P+ G P+ G P+ P G P++ +
Sbjct: 754 ICDNGVVLPPGS------PSESTPGSPSESTPGSPSESTPGSPSESTP----GNPSE-ST 802
Query: 95 PNNGYLPFPNNNPQYFTNNNPQYLQPNA 122
P + P NP T +P P +
Sbjct: 803 PGSPSESTP-GNPSESTPGSPSESTPGS 829
>M.Javanica_Scaff15213g071804 on XP_001611737 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1139
Score = 24.6 bits (52), Expect = 3.0, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Query: 109 YFTNNNPQYLQPNAAQSYGQ 128
Y TNN P YL P + Q YGQ
Sbjct: 892 YSTNNGP-YLCPLSGQQYGQ 910
>M.Javanica_Scaff15213g071804 on XP_001610720 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1102
Score = 24.3 bits (51), Expect = 3.7, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
Query: 103 PNNNPQYFTNNNPQYLQPNAAQSYGQ 128
PN+ P T QYL P + Q YGQ
Sbjct: 870 PNSAP---TGQCSQYLSPLSGQQYGQ 892
>M.Javanica_Scaff15213g071804 on XP_001608664 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1116
Score = 23.9 bits (50), Expect = 4.5, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
Query: 103 PNNNPQYFTNNNPQYLQPNAAQSYGQ 128
PN+ P T QYL P + Q YGQ
Sbjct: 884 PNSAP---TGQCSQYLSPLSGQQYGQ 906
>M.Javanica_Scaff15213g071804 on XP_811031 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 785
Score = 23.9 bits (50), Expect = 4.8, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 65 NYGQPNYQNYGQPNYQPPSMFYGQPTQYAMPNNG 98
NY Q Y NYG + YG +A P G
Sbjct: 85 NY-QSTYSNYGDADTWSRHAMYGDNNNFAKPTVG 117
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff153g002692
(509 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum] 26 5.9
>M.Javanica_Scaff153g002692 on XP_001351438 PfEMP1 (Establishment) [Plasmodium falciparum]
Length = 2312
Score = 26.2 bits (56), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 334 DENGNLHLTWPECFDMSIDVTLPPNVHINRLAMKLDVHIQPIGKLRCMDVATCGREC 390
+ENG T+ + F+ + L ++H + KL+ +Q K RC + C +EC
Sbjct: 619 EENGKKQKTYNDFFNFWVAHMLKDSIHWKK---KLEKCLQNGTKTRCRNNEKCNKEC 672
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= M.Javanica_Scaff14887g071015
(318 letters)
Database: protseq.fasta
1775 sequences; 1,065,101 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAB97088 Hsp90 (Heat shock protein) [Eimeria tenella] 27 1.3
XP_814225 Trans-sialidase (Invasion) [Trypanosoma cruzi] 26 2.7
XP_650534 HgI (Adhesin) [Entamoeba histolytica] 25 5.4
XP_001611441 variant erythrocyte surface antigen-1, beta subuni... 25 6.7
AAF14193 SBP3 (Others) [Babesia bovis] 25 7.0
>M.Javanica_Scaff14887g071015 on AAB97088 Hsp90 (Heat shock protein) [Eimeria tenella]
Length = 255
Score = 26.9 bits (58), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 267 PNDFFTILPDPNNSAKQLENPVIGMKHLEVISN 299
P F ++PD N+ +EN IGM ++++N
Sbjct: 61 PELFIRLIPDKANNTLTIENSGIGMTKADLVNN 93
>M.Javanica_Scaff14887g071015 on XP_814225 Trans-sialidase (Invasion) [Trypanosoma cruzi]
Length = 717
Score = 26.2 bits (56), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
Query: 142 VNINSNSLGTVISRKAILGGKCVDTKEDLGPPLTDLVHTYVGV-----AGPHWGAILCLV 196
++I G ++ LGG+ V D+G T+ V T GV +G W L +
Sbjct: 313 ISITEWDKGQILMVAECLGGRKVYESLDMGRTWTEAVGTLPGVWVNPRSGARWDIDLSVG 372
Query: 197 PIGPCNFNNGVNCLSTFLRDINIRQRYEGTFIYSICSTDDEVV 239
+ L T R + +R G + +C TD+ +
Sbjct: 373 SLTTATIEGVRVMLYTHKRYRTLEKRERGLY---LCVTDNSRI 412
>M.Javanica_Scaff14887g071015 on XP_650534 HgI (Adhesin) [Entamoeba histolytica]
Length = 1207
Score = 25.4 bits (54), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 66 TKRLPVILVHGITASAGGMEP--TRKYFKNKGY 96
T +LPV+ ++G+T +P T YF K Y
Sbjct: 125 TSKLPVVSINGLTCYKYAAKPPLTAAYFLEKTY 157
>M.Javanica_Scaff14887g071015 on XP_001611441 variant erythrocyte surface antigen-1, beta subunit
(Establishment) [Babesia bovis]
Length = 1205
Score = 25.0 bits (53), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 66 TKRLPVILVHGITASAGGMEPTRKYFKNKGYGDQEIFA 103
T R VI +HG+ S+G + T+ G G + A
Sbjct: 668 TARNSVIWIHGVAGSSGAGDHTKNCGLQSGAGSTSVSA 705
>M.Javanica_Scaff14887g071015 on AAF14193 SBP3 (Others) [Babesia bovis]
Length = 1089
Score = 25.0 bits (53), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 277 PNNSAKQLENPVIGMKHLEVISNTIEWQYNLITFQQIEG 315
P + KQLENPVI L++ S E YN +F +G
Sbjct: 36 PVFTEKQLENPVIVP--LDITSGIHEETYNAKSFMSKDG 72
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]